annotate Tests/Tests.py @ 138:0682740fcfcb

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author Sebastien Jodogne <s.jodogne@gmail.com>
date Fri, 25 May 2018 11:08:58 +0200
parents 412d5f70447e
children 5de178abe4d8
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1 #!/usr/bin/env python
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2 # -*- coding: utf-8 -*-
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4
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5 # Orthanc - A Lightweight, RESTful DICOM Store
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6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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7 # Department, University Hospital of Liege, Belgium
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50cd127e5330 upgrade to year 2018
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8 # Copyright (C) 2017-2018 Osimis S.A., Belgium
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9 #
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10 # This program is free software: you can redistribute it and/or
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11 # modify it under the terms of the GNU General Public License as
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12 # published by the Free Software Foundation, either version 3 of the
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13 # License, or (at your option) any later version.
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14 #
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15 # This program is distributed in the hope that it will be useful, but
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16 # WITHOUT ANY WARRANTY; without even the implied warranty of
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17 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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18 # General Public License for more details.
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19 #
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20 # You should have received a copy of the GNU General Public License
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21 # along with this program. If not, see <http://www.gnu.org/licenses/>.
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23
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24 import tempfile
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25 import unittest
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26 import base64
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28 from PIL import ImageChops
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29 from Toolbox import *
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30 from xml.dom import minidom
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31
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32 _LOCAL = None
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33 _REMOTE = None
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35
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36 def SetOrthancParameters(local, remote):
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37 global _LOCAL, _REMOTE
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38 _LOCAL = local
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39 _REMOTE = remote
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41
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42 def ExtractDicomTags(rawDicom, tags):
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43 with tempfile.NamedTemporaryFile(delete = True) as f:
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44 f.write(rawDicom)
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45 f.flush()
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46 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ])
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47
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48 result = []
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49 for tag in tags:
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50 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data)
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51 if match == None:
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52 result.append('')
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53 else:
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54 result.append(match.group(1))
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55
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56 return result
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58
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59 def InstallLuaScript(path):
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60 with open(GetDatabasePath(path), 'r') as f:
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61 DoPost(_REMOTE, '/tools/execute-script', f.read(), 'application/lua')
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64 def UninstallLuaCallbacks():
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65 DoPost(_REMOTE, '/tools/execute-script', 'function OnStoredInstance() end', 'application/lua')
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66 InstallLuaScript('Lua/TransferSyntaxEnable.lua')
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69 def CompareLists(a, b):
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70 if len(a) != len(b):
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71 return False
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72
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73 for i in range(len(a)):
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74 d = a[i] - b[i]
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75 if abs(d) >= 0.51: # Add some tolerance for rounding errors
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76 return False
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77
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78 return True
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81 def CompareTags(a, b, tagsToIgnore):
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82 for i in tagsToIgnore:
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83 if i in a:
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84 del a[i]
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85 if i in b:
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86 del b[i]
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87
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88 if a.keys() == b.keys():
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89 return True
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90 else:
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91 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys())))
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92 return False
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95 def CallFindScu(args):
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96 p = subprocess.Popen([ FindExecutable('findscu'),
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97 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'],
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98 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args,
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99 stderr=subprocess.PIPE)
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100 return p.communicate()[1]
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101
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102
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103 def CallMoveScu(args):
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104 subprocess.check_call([ FindExecutable('movescu'),
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105 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp)
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106 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc)
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107 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp)
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108 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args,
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109 stderr=subprocess.PIPE)
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110
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111
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112
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113 def GenerateTestSequence():
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114 return [
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115 {
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116 'StudyDescription': 'Hello^',
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117 'ReferencedStudySequence' : [
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118 {
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119 'StudyDescription': 'Toto',
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120 },
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121 {
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122 'StudyDescription': 'Tata',
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123 },
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124 ]
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125 },
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126 {
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127 'StudyDescription': 'Sébastien^',
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128 'StudyDate' : '19700202',
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129 }
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130 ]
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131
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132
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133
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134
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135 class Orthanc(unittest.TestCase):
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136 def setUp(self):
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137 if (sys.version_info >= (3, 0)):
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138 # Remove annoying warnings about unclosed socket in Python 3
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139 import warnings
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140 warnings.simplefilter("ignore", ResourceWarning)
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141
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142 DropOrthanc(_LOCAL)
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143 DropOrthanc(_REMOTE)
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144 UninstallLuaCallbacks()
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145 #print "In test", self._testMethodName
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146
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147 def AssertSameImages(self, truth, url):
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148 im = GetImage(_REMOTE, url)
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149 self.assertTrue(CompareLists(truth, im.getdata()))
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150
3
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parents:
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151
2dbba2e6aa4b reorganization
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parents:
diff changeset
152 def test_system(self):
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153 self.assertTrue('Version' in DoGet(_REMOTE, '/system'))
2dbba2e6aa4b reorganization
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parents:
diff changeset
154 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
2dbba2e6aa4b reorganization
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parents:
diff changeset
155 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
2dbba2e6aa4b reorganization
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parents:
diff changeset
156
2dbba2e6aa4b reorganization
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parents:
diff changeset
157 def test_upload(self):
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parents:
diff changeset
158 u = UploadInstance(_REMOTE, 'DummyCT.dcm')
2dbba2e6aa4b reorganization
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parents:
diff changeset
159 self.assertEqual('Success', u['Status'])
2dbba2e6aa4b reorganization
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parents:
diff changeset
160 u = UploadInstance(_REMOTE, 'DummyCT.dcm')
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
161 self.assertEqual('AlreadyStored', u['Status'])
2dbba2e6aa4b reorganization
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parents:
diff changeset
162 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
163 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
164 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
2dbba2e6aa4b reorganization
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parents:
diff changeset
165 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
166
2dbba2e6aa4b reorganization
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parents:
diff changeset
167 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % u['ID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
168 self.assertEqual('20070101', i['StudyDate'])
2dbba2e6aa4b reorganization
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parents:
diff changeset
169
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
170
5
19eb87a45685 test_images
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parents: 3
diff changeset
171 def test_upload_2(self):
3
2dbba2e6aa4b reorganization
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parents:
diff changeset
172 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
173 instance = DoGet(_REMOTE, '/instances/%s' % i)
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
174 self.assertEqual(i, instance['ID'])
2dbba2e6aa4b reorganization
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parents:
diff changeset
175 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109',
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
176 instance['MainDicomTags']['SOPInstanceUID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
177
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parents:
diff changeset
178 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries'])
2dbba2e6aa4b reorganization
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parents:
diff changeset
179 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394',
2dbba2e6aa4b reorganization
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parents:
diff changeset
180 series['MainDicomTags']['SeriesInstanceUID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
181
2dbba2e6aa4b reorganization
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parents:
diff changeset
182 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy'])
2dbba2e6aa4b reorganization
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parents:
diff changeset
183 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390',
2dbba2e6aa4b reorganization
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parents:
diff changeset
184 study['MainDicomTags']['StudyInstanceUID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
185
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parents:
diff changeset
186 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
187 self.assertEqual('ozp00SjY2xG',
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
188 patient['MainDicomTags']['PatientID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
189
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
190 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
191 self.assertEqual(2472, len(dicom))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
192 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
193 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i)))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
194 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
195 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value'])
136
5634ef96fcc5 testing "short" option
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parents: 133
diff changeset
196 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName'])
5634ef96fcc5 testing "short" option
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parents: 133
diff changeset
197 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010'])
3
2dbba2e6aa4b reorganization
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parents:
diff changeset
198
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
199
5
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
200 def test_images(self):
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
201 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID']
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
202 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i)))
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
203
5
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
204 im = GetImage(_REMOTE, '/instances/%s/preview' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
205 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
206 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
207 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
208
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
209 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
210 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
211 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
212 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
213
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
214 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
215 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
216 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
217
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
218 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
219 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
220 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
221 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
222
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
223 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
224 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
225 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
226 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
227
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
228 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
229 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
230 self.assertEqual(358, im.size[1])
64
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
231
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
232 # This is Little Endian Explicit
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
233 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID'])
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
234
6
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
235
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
236 def test_hierarchy(self):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
237 UploadFolder(_REMOTE, 'Brainix/Epi')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
238 UploadFolder(_REMOTE, 'Brainix/Flair')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
239 UploadFolder(_REMOTE, 'Knee/T1')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
240 UploadFolder(_REMOTE, 'Knee/T2')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
241
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
242 p = DoGet(_REMOTE, '/patients')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
243 s = DoGet(_REMOTE, '/studies')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
244 t = DoGet(_REMOTE, '/series')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
245 self.assertEqual(2, len(p))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
246 self.assertEqual(2, len(s))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
247 self.assertEqual(4, len(t))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
248 self.assertEqual(94, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
249
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
250 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
251 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
252 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
253 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
254
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
255 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
256 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
257 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
258 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
259
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
260 self.assertTrue(brainixPatient in p)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
261 self.assertTrue(kneePatient in p)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
262 self.assertTrue(brainixStudy in s)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
263 self.assertTrue(kneeStudy in s)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
264 self.assertTrue(brainixEpi in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
265 self.assertTrue(brainixFlair in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
266 self.assertTrue(kneeT1 in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
267 self.assertTrue(kneeT2 in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
268
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
269 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
270 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
271 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
272
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
273 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
274 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
275 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
276
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
277 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
278 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
279
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
280 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
281 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
282
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
283 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
284 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
285 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
286 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
287
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
288 for patient in p:
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
289 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
290 self.assertEqual(patient, study['ParentPatient'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
291 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
292 self.assertEqual(study['ID'], series['ParentStudy'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
293 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
294 self.assertEqual(series['ID'], instance['ParentSeries'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
295
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
296 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])),
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
297 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID'])))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
298
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
299
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
300 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
301 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
302 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
303 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
304 self.assertEqual(50, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
305 self.assertEqual(None, r)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
306
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
307 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
308 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
309 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
310 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
311 self.assertEqual(24, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
312 self.assertEqual('Study', r['Type'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
313 self.assertEqual(kneeStudy, r['ID'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
314
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
315 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
316 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
317 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
318 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
319 self.assertEqual(23, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
320 self.assertEqual('Series', r['Type'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
321 self.assertEqual(kneeT1, r['ID'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
322
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
323 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
324 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
325 self.assertEqual(0, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
326 self.assertEqual(0, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
327 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
328 self.assertEqual(None, r)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
329
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
330 DropOrthanc(_REMOTE)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
331 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
332 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
7
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
333
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
334
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
335 def test_multiframe(self):
7
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
336 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID']
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
337 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i)))
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
338
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
339 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
340 self.assertEqual("L", im.mode)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
341 self.assertEqual(512, im.size[0])
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
342 self.assertEqual(512, im.size[1])
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
343
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
344 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
345 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
346 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
347 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i))
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
348 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i))
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
349
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
350
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
351 def test_changes(self):
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
352 # Check emptiness
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
353 c = DoGet(_REMOTE, '/changes')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
354 self.assertEqual(0, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
355 self.assertEqual(0, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
356 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
357 c = DoGet(_REMOTE, '/changes?last')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
358 self.assertEqual(0, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
359 self.assertEqual(0, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
360 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
361
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
362 # Add 1 instance
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
363 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
364 c = DoGet(_REMOTE, '/changes')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
365 begin = c['Last']
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
366 self.assertEqual(4, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
367 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
368 self.assertEqual(c['Changes'][-1]['Seq'], c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
369
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
370 c = DoGet(_REMOTE, '/changes?last')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
371 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
372 self.assertEqual(begin, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
373 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
374 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
375 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
376 self.assertEqual(begin, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
377 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
378 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
379 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
380 self.assertEqual(begin - 1, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
381 self.assertFalse(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
382 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
383 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
384 self.assertEqual(begin - 2, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
385 self.assertFalse(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
386
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
387 UploadFolder(_REMOTE, 'Knee/T1')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
388 UploadFolder(_REMOTE, 'Knee/T2')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
389 since = begin
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
390 countPatients = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
391 countStudies = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
392 countSeries = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
393 countInstances = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
394 completed = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
395 while True:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
396 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 3 })
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
397 since = c['Last']
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
398 for i in c['Changes']:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
399 if i['ResourceType'] == 'Instance':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
400 countInstances += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
401 if i['ResourceType'] == 'Patient':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
402 countPatients += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
403 if i['ResourceType'] == 'Study':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
404 countStudies += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
405 if i['ResourceType'] == 'Series':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
406 countSeries += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
407 if i['ChangeType'] == 'NewInstance':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
408 countInstances += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
409 if i['ChangeType'] == 'NewPatient':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
410 countPatients += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
411 if i['ChangeType'] == 'NewStudy':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
412 countStudies += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
413 if i['ChangeType'] == 'NewSeries':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
414 countSeries += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
415 if i['ChangeType'] == 'CompletedSeries':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
416 completed += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
417 self.assertTrue('ID' in i)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
418 self.assertTrue('Path' in i)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
419 self.assertTrue('Seq' in i)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
420 if c['Done']:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
421 break
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
422
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
423 self.assertEqual(2 * 50, countInstances)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
424 self.assertEqual(2 * 1, countPatients)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
425 self.assertEqual(2 * 1, countStudies)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
426 self.assertEqual(2 * 2, countSeries)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
427 self.assertEqual(0, completed)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
428
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
429
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
430 def test_archive(self):
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
431 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
432 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
433
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
434 z = GetArchive(_REMOTE, '/patients/%s/archive' % DoGet(_REMOTE, '/patients')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
435 self.assertEqual(2, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
436
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
437 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
438 self.assertEqual(2, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
439
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
440 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
441 self.assertEqual(1, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
442
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
443 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
444
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
445 z = GetArchive(_REMOTE, '/patients/%s/archive' % DoGet(_REMOTE, '/patients')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
446 self.assertEqual(2, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
447
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
448
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
449 def test_media_archive(self):
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
450 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
451 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
452
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
453 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
454 self.assertEqual(3, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
455 self.assertTrue('IMAGES/IM0' in z.namelist())
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
456 self.assertTrue('IMAGES/IM1' in z.namelist())
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
457 self.assertTrue('DICOMDIR' in z.namelist())
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
458
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
459 try:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
460 os.remove('/tmp/DICOMDIR')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
461 except:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
462 # The file does not exist
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
463 pass
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
464
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
465 z.extract('DICOMDIR', '/tmp')
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
466 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ],
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
467 stderr = subprocess.STDOUT).split('\n')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
468 self.assertEqual(3, len(a))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
469 self.assertTrue(a[0].startswith('Warning'))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
470 self.assertEqual('BasicDirectory', a[1])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
471 self.assertEqual('', a[2])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
472
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
473 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ],
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
474 stderr = subprocess.STDOUT).split('\n')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
475 self.assertEqual(1, len(a))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
476 self.assertEqual('', a[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
477
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
478 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ])
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
479 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
480 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
481
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
482 os.remove('/tmp/DICOMDIR')
10
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
483
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
484
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
485 def test_protection(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
486 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
487 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
488 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
489 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
490 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
491 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
492 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
493 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
494 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
495 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
496 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
497 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
498
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
499
12
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
500 def test_raw_tags(self):
10
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
501 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
502
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
503 dicom = DoGet(_REMOTE, '/instances/%s/file' % i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
504 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
505
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
506 s = '/instances/%s/content/' % i
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
507
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
508 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
509 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
510
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
511 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
512 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
514 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
515 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
516 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
517 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
518
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
519 for i in DoGet(_REMOTE, '/instances'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
520 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
521 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), ''))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
522
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
523
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
524 def test_raw_tags_mdn(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
525 # Bug reported by Cyril Paulus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
526 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
527 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
528
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
529
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
530 def test_modify_instance(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
531 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
532 modified = DoPost(_REMOTE, '/instances/%s/modify' % i,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
533 json.dumps({
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
534 "Replace" : {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
535 "PatientName" : "hello",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
536 #"PatientID" : "world"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
537 },
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
538 "Remove" : [ "StationName" ],
118
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
539 "RemovePrivateTags" : True
10
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
540 }),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
541 'application/json')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
542 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
543
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
544 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
545 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip())
83
3f2170efa8d2 patches for python3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 81
diff changeset
546 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip())
10
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
547 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
548
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
549 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
550 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
551 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
552 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
553
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
554
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
555 def test_modify_series(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
556 # Upload 4 images from the same series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
557 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
558 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
559
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
560 origSeries = DoGet(_REMOTE, '/series')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
561 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
562 '{"Replace":{"PatientName":"Jodogne"}}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
563 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
564
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
565 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
566 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
567 self.assertEqual(4, len(instances))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
568 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
569 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
570 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
571 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
572
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
573 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
574 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
575
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
576
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
577 def test_modify_study(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
578 # Upload 4 images from the 2 series of the same study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
579 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
580 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
581 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
582
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
583 origStudy = DoGet(_REMOTE, '/studies')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
584 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
585 '{"Replace":{"PatientName":"Jodogne"}}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
586 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
587
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
588 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
589 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
590 self.assertEqual(2, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
591 for s in series:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
592 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
593 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
594 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
595
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
596 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
597 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
598 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
599 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
600 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
601
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
602 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
603 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
604
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
605
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
606 def test_anonymize_series(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
607 # Upload 4 images from the same series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
608 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
609 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
610
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
611 origSeries = DoGet(_REMOTE, '/series')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
612 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
613 '{}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
614 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
615
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
616 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
617 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
618 self.assertEqual(4, len(instances))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
619 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
620 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
621 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
622 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
623
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
624 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
625 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
626
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
627
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
628 def test_anonymize_study(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
629 # Upload 4 images from the 2 series of the same study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
630 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
631 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
632 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
633
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
634 origStudy = DoGet(_REMOTE, '/studies')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
635 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
636 '{"Replace":{"PatientName":"Jodogne"}}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
637 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
638
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
639 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
640 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
641 self.assertEqual(2, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
642 for s in series:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
643 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
644 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
645 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
646
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
647 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
648 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
649 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
650 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
651 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
652
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
653 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
654 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
11
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
655
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
656
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
657
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
658 def test_storescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
659 # Check emptiness
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
660 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
661 self.assertEqual(0, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
662 self.assertEqual(0, e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
663 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
664 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
665 self.assertEqual(0, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
666 self.assertEqual(0, e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
667 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
668
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
669 # Add 1 instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
670 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
671 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
672
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
673 # Export the instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
674 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
675 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
676 self.assertEqual(1, len(DoGet(_LOCAL, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
677 self.assertEqual(1, len(DoGet(_LOCAL, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
678 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
679
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
680 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
681 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
682 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
683 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
684 e = DoGet(_REMOTE, '/exports?limit=1')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
685 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
686 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
687 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
688 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
689 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
690 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
691 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
692 seqInstance = e['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
693
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
694 # Export the series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
695 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
696
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
697 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
698 self.assertEqual(2, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
699 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
700 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
701 seqSeries = e['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
702 self.assertNotEqual(seqInstance, seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
703 e = DoGet(_REMOTE, '/exports?limit=1&since=0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
704 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
705 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
706 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
707 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
708 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
709 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
710 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
711 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
712 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
713 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
714 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
715
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
716 # Export the study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
717 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
718 seqStudy = DoGet(_REMOTE, '/exports')['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
719
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
720 # Export the patient
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
721 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
722 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
723 self.assertEqual(1, len(DoGet(_LOCAL, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
724 self.assertEqual(1, len(DoGet(_LOCAL, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
725 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
726
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
727 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
728 self.assertEqual(4, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
729 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
730 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
731 seqPatient = e['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
732 self.assertNotEqual(seqInstance, seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
733 self.assertNotEqual(seqSeries, seqStudy)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
734 self.assertNotEqual(seqStudy, seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
735 self.assertTrue(seqInstance < seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
736 self.assertTrue(seqSeries < seqStudy)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
737 self.assertTrue(seqStudy < seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
738 e = DoGet(_REMOTE, '/exports?limit=1&since=0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
739 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
740 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
741 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
742 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
743 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
744 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
745 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
746 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
747 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
748 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
749 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
750 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
751 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
752 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
753 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
754 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
755 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
756 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
757 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
758
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
759
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
760 # Check the content of the logged information
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
761 e = DoGet(_REMOTE, '/exports')['Exports']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
762
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
763 if 'PatientID' in e[0]:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
764 # Since Orthanc 0.8.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
765 patient = 'PatientID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
766 study = 'StudyInstanceUID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
767 series = 'SeriesInstanceUID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
768 instance = 'SOPInstanceUID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
769 else:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
770 # Up to Orthanc 0.8.5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
771 patient = 'PatientId'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
772 study = 'StudyInstanceUid'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
773 series = 'SeriesInstanceUid'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
774 instance = 'SopInstanceUid'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
775
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
776 for k in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
777 self.assertTrue('Date' in e[k])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
778 self.assertTrue('Seq' in e[k])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
779 self.assertEqual('orthanctest', e[k]['RemoteModality'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
780
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
781 self.assertEqual(10, len(e[0]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
782 self.assertEqual('Instance', e[0]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
783 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
784 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
785 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
786 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
787 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
788 self.assertEqual('ozp00SjY2xG', e[0][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
789
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
790 self.assertEqual(9, len(e[1]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
791 self.assertEqual('Series', e[1]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
792 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
793 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
794 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
795 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
796 self.assertEqual('ozp00SjY2xG', e[1][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
797
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
798 self.assertEqual(8, len(e[2]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
799 self.assertEqual('Study', e[2]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
800 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
801 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
802 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
803 self.assertEqual('ozp00SjY2xG', e[2][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
804
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
805 self.assertEqual(7, len(e[3]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
806 self.assertEqual('Patient', e[3]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
807 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
808 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
809 self.assertEqual('ozp00SjY2xG', e[3][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
810
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
811 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
812 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
813
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
814
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
815 def test_store_peer(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
816 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
817 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
818
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
819 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
820 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
821 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
822
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
823 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
824 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
825 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
826
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
827 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
828
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
829 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
830 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
831
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
832
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
833 def test_bulk_storescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
834 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
835
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
836 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
837 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
838
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
839 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
840 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
841
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
842 DropOrthanc(_LOCAL)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
843
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
844 # Send using patient's UUID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
845 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
846 j = DoPost(_REMOTE, '/modalities/orthanctest/store',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
847 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
848 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
849
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
850
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
851 def test_color(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
852 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
853 im = GetImage(_REMOTE, '/instances/%s/preview' % i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
854 self.assertEqual("RGB", im.mode)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
855 self.assertEqual(41, im.size[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
856 self.assertEqual(41, im.size[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
857
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
858 # http://effbot.org/zone/pil-comparing-images.htm
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
859 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png'))
11
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
860 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
861
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
862
12
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
863 def test_faking_ruby_put(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
864 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
865 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
866 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
867 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
868 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
869 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
870 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
871 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
872 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
873 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
874 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
875 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
876
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
877
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
878 def test_faking_ruby_delete(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
879 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
880 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
881 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
882 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
883 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
884 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
885 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
886 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
887 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
888
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
889
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
890 def test_faking_google_put(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
891 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
892 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
893 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
894 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
895 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
896 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
897 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
898 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
899 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
900 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
901 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
902 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
903
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
904
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
905 def test_faking_google_delete(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
906 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
907 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
908 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
909 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
910 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
911 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
912 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
913 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
914 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
915
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
916
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
917 def test_lua(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
918 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
919 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
920 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
921
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
922
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
923 def test_metadata(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
924 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
925 p = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
926 i = DoGet(_REMOTE, '/instances')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
927
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
928 m = DoGet(_REMOTE, '/patients/%s/metadata' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
929 self.assertEqual(1, len(m))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
930 self.assertEqual('LastUpdate', m[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
931
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
932 m = DoGet(_REMOTE, '/instances/%s/metadata' % i)
95
a807a4699eb4 testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 92
diff changeset
933 self.assertEqual(6, len(m))
12
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
934 self.assertTrue('IndexInSeries' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
935 self.assertTrue('ReceptionDate' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
936 self.assertTrue('RemoteAET' in m)
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
937 self.assertTrue('Origin' in m)
89
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
938 self.assertTrue('TransferSyntax' in m)
95
a807a4699eb4 testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 92
diff changeset
939 self.assertTrue('SopClassUid' in m)
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
940 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1)
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
941 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi')
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
942 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API
89
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
943 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k
95
a807a4699eb4 testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 92
diff changeset
944 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4')
12
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
945
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
946 # Play with custom metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
947 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
948 m = DoGet(_REMOTE, '/patients/%s/metadata' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
949 self.assertEqual(2, len(m))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
950 self.assertTrue('LastUpdate' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
951 self.assertTrue('5555' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
952 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
953 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
954 self.assertEqual('hello', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
955 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
956 m = DoGet(_REMOTE, '/patients/%s/metadata' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
957 self.assertEqual(1, len(m))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
958 self.assertTrue('LastUpdate' in m)
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
959
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
960
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
961 def test_statistics(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
962 # Upload 16 instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
963 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
964 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
965 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
966 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
967 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
968
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
969 s = DoGet(_REMOTE, '/statistics')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
970 self.assertEqual(16, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
971 self.assertEqual(2, s['CountPatients'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
972 self.assertEqual(2, s['CountStudies'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
973 self.assertEqual(4, s['CountSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
974 d = int(s['TotalUncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
975
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
976 e = 0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
977 for patient in DoGet(_REMOTE, '/patients'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
978 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
979 self.assertEqual(8, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
980 self.assertEqual(1, s['CountStudies'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
981 self.assertEqual(2, s['CountSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
982 e += int(s['UncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
983
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
984 for study in DoGet(_REMOTE, '/studies'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
985 s = DoGet(_REMOTE, '/studies/%s/statistics' % study)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
986 self.assertEqual(8, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
987 self.assertEqual(2, s['CountSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
988 e += int(s['UncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
989
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
990 for series in DoGet(_REMOTE, '/series'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
991 s = DoGet(_REMOTE, '/series/%s/statistics' % series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
992 self.assertEqual(4, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
993 e += int(s['UncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
994
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
995 self.assertEqual(3 * d, e)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
996
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
997
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
998 def test_custom_attachment(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
999 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1000 patient = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1001 instance = DoGet(_REMOTE, '/instances')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1002 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1003 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1004
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1005 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1006 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1007 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1008 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1009
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1010 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1011 hello = 'hellohellohellohellohellohellohellohellohello'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1012 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1013 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1014 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1015 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1016 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1017
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1018 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1019 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1020 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1021 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1022 size +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1023 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1024 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1025
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1026 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1027 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1028 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1029 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1030 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1031 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1032 self.assertEqual('world2', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1033
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1034 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1035 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1036 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1037 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1038 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1039 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1040
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1041 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1042 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1043 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1044
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1045 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1046 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1047
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1048
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1049 def test_incoming_storescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1050 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
1051 subprocess.check_call([ FindExecutable('storescu'),
44
ffa542cce638 Toolbox.FindExecutable()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 43
diff changeset
1052 _REMOTE['Server'], str(_REMOTE['DicomPort']),
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1053 GetDatabasePath('ColorTestImageJ.dcm') ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1054 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1055
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1056 i = DoGet(_REMOTE, '/instances')
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1057 self.assertEqual(1, len(i))
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1058 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0])
95
a807a4699eb4 testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 92
diff changeset
1059 self.assertEqual(6, len(m))
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1060 self.assertTrue('IndexInSeries' in m)
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1061 self.assertTrue('ReceptionDate' in m)
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1062 self.assertTrue('RemoteAET' in m)
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1063 self.assertTrue('Origin' in m)
89
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
1064 self.assertTrue('TransferSyntax' in m)
95
a807a4699eb4 testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 92
diff changeset
1065 self.assertTrue('SopClassUid' in m)
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1066 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1)
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1067 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol')
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1068 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU')
89
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
1069 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1')
95
a807a4699eb4 testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 92
diff changeset
1070 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7')
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1071
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1072
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1073 def test_incoming_findscu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1074 UploadInstance(_REMOTE, 'Multiframe.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1075 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1076
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1077 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1078 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1079 self.assertEqual(2, len(patientNames))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1080 self.assertTrue('Test Patient BG ' in patientNames)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1081 self.assertTrue('Anonymized' in patientNames)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1082
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1083 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1084 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1085 self.assertEqual(2, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1086 self.assertTrue('20070208' in series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1087 self.assertTrue('19980312' in series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1088
56
1059b8de42de ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 55
diff changeset
1089 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'ModalitiesInStudy=MR\\XA' ])
1059b8de42de ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 55
diff changeset
1090 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i)
1059b8de42de ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 55
diff changeset
1091 self.assertEqual(1, len(series))
1059b8de42de ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 55
diff changeset
1092 self.assertTrue('19980312' in series)
1059b8de42de ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 55
diff changeset
1093
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1094 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1095 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1096 self.assertEqual(1, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1097
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1098 # Test the "CaseSentitivePN" flag (false by default)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1099 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1100 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1101 self.assertEqual(1, len(series))
66
821d9eb73c45 Test returning sequence values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
1102
821d9eb73c45 Test returning sequence values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
1103 # Test returning sequence values (only since Orthanc 0.9.5)
821d9eb73c45 Test returning sequence values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
1104 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag
821d9eb73c45 Test returning sequence values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
1105 sequences = re.findall('\(0008,2112\)', i)
821d9eb73c45 Test returning sequence values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
1106 self.assertEqual(1, len(sequences))
70
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1107
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1108 # Test range search (buggy if Orthanc <= 0.9.6)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1109 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ])
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1110 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1111 self.assertEqual(2, len(studies))
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1112 self.assertTrue('20070208' in studies)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1113 self.assertTrue('19980312' in studies)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1114 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ])
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1115 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1116 self.assertEqual(1, len(studies))
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1117 self.assertTrue('19980312' in studies)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1118 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ])
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1119 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1120 self.assertEqual(1, len(studies))
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1121 self.assertTrue('19980312' in studies)
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1122
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1123
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1124 def test_incoming_movescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1125 UploadInstance(_REMOTE, 'Multiframe.dcm')
137
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1126
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1127 # No matching patient, so no job is created
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1128 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1129 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ])
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1130 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
137
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1131
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1132 # 1 Matching patient, track the job
138
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
1133 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
1134 '--patient',
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
1135 '-k', '0008,0052=PATIENT',
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
1136 '-k', 'PatientID=12345678'
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
1137 ])))
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1138 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1139
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1140
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1141 def test_findscu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1142 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1143 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1144 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1145 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1146
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1147 # Test the "find-patient" level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1148 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1149 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1150 self.assertEqual('ozp00SjY2xG', p[0]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1151
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1152 # Test wildcards constraints. The "LO" value representation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1153 # for PatientID is always case-sensitive, but the "PN" for
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1154 # PatientName might depend on the implementation:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1155 # "GenerateConfigurationForTests.py" will force it to be case
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1156 # insensitive (which was the default until Orthanc 0.8.6).
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1157 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1158 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1159
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1160 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1161 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1162
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1163 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1164 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1165
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1166 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1167 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1168
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1169 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1170 self.assertEqual(0, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1171
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1172 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1173 self.assertEqual(0, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1174
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1175 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1176 self.assertEqual(0, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1177
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1178 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1179 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1180 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1181 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { })))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1182
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1183 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1184 self.assertEqual(2, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1185
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1186 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1187 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1188 self.assertEqual(1, len(s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1189 self.assertEqual('20070208', s[0]['StudyDate'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1190
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1191 # Test range searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1192 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1193 'StudyDate' : '-20070101' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1194 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1195
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1196 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1197 'StudyDate' : '20090101-' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1198 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1199
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1200 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1201 'StudyDate' : '20070101-' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1202 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1203
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1204 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1205 'StudyDate' : '-20090101' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1206 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1207
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1208 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1209 'StudyDate' : '20070207-20070207' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1210 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1211
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1212 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1213 'StudyDate' : '20070208-20070208' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1214 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1215
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1216 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1217 'StudyDate' : '20070209-20070209' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1218 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1219
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1220 # Test the ModalitiesInStudy tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1221 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1222 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1223 'ModalitiesInStudy' : 'US' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1224 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1225
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1226 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1227 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1228 'ModalitiesInStudy' : 'CT' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1229 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1230
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1231 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1232 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1233 'ModalitiesInStudy' : 'US\\CT' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1234 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1235
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1236 # Test the "find-series" level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1237 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1238 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1239 'StudyInstanceUID' : s[0]['StudyInstanceUID'] })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1240 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1241
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1242 # Test "\" separator
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1243 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1244 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1245 'StudyInstanceUID' : s[0]['StudyInstanceUID'],
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1246 'Modality' : 'MR\\CT\\US' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1247 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1248
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1249 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1250 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1251 'StudyInstanceUID' : s[0]['StudyInstanceUID'],
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1252 'Modality' : 'MR\\US' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1253 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1254
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1255
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1256 def test_update_modalities(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1257 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1258 DoDelete(_REMOTE, '/modalities/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1259 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1260 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1261 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1262 DoDelete(_REMOTE, '/modalities/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1263 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1264 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1265 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1266 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ])
116
4a196ebc7a4f updated tests for issue #31
amazy
parents: 112
diff changeset
1267 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer
4a196ebc7a4f updated tests for issue #31
amazy
parents: 112
diff changeset
1268 DoDelete(_REMOTE, '/modalities/tata')
124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 123
diff changeset
1269 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ])
121
1a19f953f53c also test GenericNoWildcardInDates
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 120
diff changeset
1270 DoDelete(_REMOTE, '/modalities/tata')
1a19f953f53c also test GenericNoWildcardInDates
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 120
diff changeset
1271 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ])
128
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1272 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand')
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1273 self.assertEqual([ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ], modalitiesReadback['tata'])
116
4a196ebc7a4f updated tests for issue #31
amazy
parents: 112
diff changeset
1274 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ]))
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1275 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1276 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1277 DoDelete(_REMOTE, '/modalities/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1278 DoDelete(_REMOTE, '/modalities/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1279 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1280 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1281
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1282
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1283 def test_update_peers(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1284 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1285 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1286 DoDelete(_REMOTE, '/peers/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1287 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1288 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1289 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1290 DoDelete(_REMOTE, '/peers/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1291 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1292 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1293 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1294 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1295 DoPut(_REMOTE, '/peers/tata', [ 'http://localhost:8042/', 'user', 'pass' ])
128
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1296 self.assertTrue('tata' in DoGet(_REMOTE, '/peers'))
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1297 peersReadback = DoGet(_REMOTE, '/peers?expand')
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1298 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url'])
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1299 self.assertEqual('user', peersReadback['tata']['Username'])
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1300 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1301 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1302 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1303 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1304 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1305 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1306 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1307 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1308 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1309 DoDelete(_REMOTE, '/peers/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1310 DoDelete(_REMOTE, '/peers/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1311 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1312 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1313
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1314
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1315 def test_mesterhazy_modification(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1316 # When I modify a series ( eg. curl
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1317 # http://localhost:8042/series/uidhere/modify -X POST -d
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1318 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1319 # series is added to a new Study, instead of the existing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1320 # Study. Fixed in Orthanc 0.7.5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1321
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1322 u = UploadInstance(_REMOTE, 'DummyCT.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1323 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1324 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1325
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1326 modified = DoPost(_REMOTE, '/series/%s/modify' % series,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1327 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }}))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1328
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1329 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1330
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1331
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1332 def test_create(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1333 i = DoPost(_REMOTE, '/tools/create-dicom',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1334 json.dumps({
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1335 'PatientName' : 'Jodogne',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1336 'Modality' : 'CT',
58
b5518378e23b fix test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
1337 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1',
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1338 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1339 }))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1340
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1341 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1342 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1343
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1344 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1345 self.assertEqual((5, 5), png.size)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1346
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1347 j = DoGet(_REMOTE, i['Path'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1348 self.assertEqual('Instance', j['Type'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1349 self.assertEqual(j['ID'], i['ID'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1350
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1352 def test_pilates(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1353 # "SCU failed error when accessing orthanc with osirix" by
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1354 # Pilates Agentur (Mar 10, 2014 at 9:33 PM)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1355 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1356 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1357 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1358 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1359
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1360
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1361 def test_shared_tags(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1362 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1363 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1364 p = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1365
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1366 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1367 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
136
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1368 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p))
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1369
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1370 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value'])
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1371 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName'])
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1372 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010'])
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1373
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1374 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1375 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1376 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1377 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1378 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1379 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1380
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1381 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1382 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1383
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1384
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1385 def test_modules(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1386 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1387 p = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1388 s = DoGet(_REMOTE, '/studies')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1389 t = DoGet(_REMOTE, '/series')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1390
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1391 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1392 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1393 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1394 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1395 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1396 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1397 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1398 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1399 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1400 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1401
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1402
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1403 def test_auto_directory(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1404 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1405 self.assertTrue('now' in DoGet(_REMOTE, '/tools'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1406 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools'))
87
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
1407 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools'))
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1408 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1409 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1410 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1411 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1412 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1413 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1414 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1415 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1416 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1417 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1418 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a))
79
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
1419 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a))
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1420 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope'))
28
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1421 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope'))
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1422 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html'))
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1423 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status)
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1424 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status)
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1425
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1426
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1427 def test_echo(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1428 DoPost(_REMOTE, '/modalities/orthanctest/echo')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1429
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1430
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1431 def test_xml(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1432 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1433 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' }))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1434 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1435 self.assertEqual(len(items), len(json))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1436
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1437 self.assertTrue('dicom-conformance' in json)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1438
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1439 ok = False
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1440 for i in items:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1441 if i.childNodes[0].data == 'dicom-conformance':
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1442 ok = True
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1443 self.assertTrue(ok)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1444
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1445
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1446 def test_googlecode_issue_16(self):
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1447 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1448 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1449 self.assertEqual('0018,1063', t)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1450
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1451
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1452 def test_googlecode_issue_22(self):
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1453 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1454 a = [
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1455 "f804691f62197040438f4627c6b994f1", # Frame 0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1456 "c69eee9a51eea3e8611e82e578897254",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1457 "315666be83e2d0111c77bc0996d84901",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1458 "3e27aa959d911172c48a1436443c72b1",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1459 "958642c9e7e9d232d3869faff546058c",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1460 "5e7ea8e3e4230cae707d143481355c59",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1461 "eda37f83558d858a596175aed8b2ad47",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1462 "486713bd2895c4ecbe0e97715ac7f80a",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1463 "091ef729eb169e67da8a0faa9631f9a8",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1464 "5aa2b8c7ffe0a483efaa8e12417686ca",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1465 "e2f39e85896fe58876654b94cd0b5013",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1466 "6fd2129e4950abbe1be053bc814d5da8",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1467 "c3331a8ba7a757f3d423735ab7fa81f9",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1468 "746f808582156734dd6b6fdfd3a0b72c",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1469 "8075ea2b227a70c60ea6b7b75a6bb190",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1470 "806b8b3e300c615099c11a5ec23465aa",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1471 "7c836aa298ba6eef96434579af631a11",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1472 "a0357dc9f4f72d73a885c33d7c287446",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1473 "f25ba3be1cc7d7fad95706adc199ea7d",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1474 "8b114c526b8cbed6cad8a3248b7b480c",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1475 "44e6670f127e612a2b4aa60a0d207698",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1476 "b8945f90fe02facf2ace24ca1ecbe0a5",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1477 "95c796c2fa8f59018b15cf2987b1f79b",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1478 "ce0a51ab30224205b44920221dc27351", # Frame 23
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1479 ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1480
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1481 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1482 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1483
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1484 for i in range(len(a)):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1485 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i))))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1486
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1487
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1488 def test_googlecode_issue_19(self):
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1489 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1490 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1491
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1492 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID']
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1493 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview'))
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1494
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1495
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1496 def test_googlecode_issue_37(self):
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1497 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1498 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1499
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1500 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1501 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1502 'Query' : { 'StationName' : 'SMR4-MP3' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1503 self.assertEqual(1, len(a))
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1504
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1505
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1506 def test_rest_find(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1507 # Upload 8 instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1508 for i in range(2):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1509 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1510 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1511 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1512 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1514 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1515 'CaseSensitive' : False,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1516 'Query' : { 'PatientName' : '*n*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1517 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1518
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1519 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1520 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1521 'Query' : { 'PatientName' : '*n*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1522 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1523
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1524 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1525 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1526 'CaseSensitive' : False,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1527 'Query' : { 'PatientName' : '*ne*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1528 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1529 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1530
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1531 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1532 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1533 'Query' : { 'PatientName' : '*ne*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1534 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1535
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1536 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1537 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1538 'Query' : { 'PatientName' : '*NE*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1539 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1540
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1541 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1542 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1543 'Query' : { 'PatientName' : '*NE*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1544 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1545
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1546 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1547 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1548 'Query' : { 'PatientName' : '*NE*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1549 self.assertEqual(4, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1550
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1551 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1552 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1553
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1554 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1555 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1556
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1557 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1558 self.assertEqual(4, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1559
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1560 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1561 self.assertEqual(8, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1562
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1563
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1564 def test_rest_query_retrieve(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1565 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1566
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1567 # Upload 8 instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1568 for i in range(2):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1569 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1570 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1571 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1572 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1573
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1574 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1575 for p in DoGet(_REMOTE, '/patients'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1576 DoPost(_REMOTE, '/modalities/orthanctest/store', p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1577 DoDelete(_REMOTE, '/patients/%s' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1578
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1579 for q in DoGet(_REMOTE, '/queries'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1580 DoDelete(_REMOTE, '/queries/%s' % q)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1581
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1582 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1583 self.assertEqual(0, len(DoGet(_REMOTE, '/queries')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1584 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series',
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1585 'Query' : {
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1586 'PatientName' : '*NE*',
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1587 'StudyDate' : '*',
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1588 }})['ID']
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1589 self.assertEqual(1, len(DoGet(_REMOTE, '/queries')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1590
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1591 b = DoGet(_REMOTE, '/queries/%s' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1592 self.assertTrue('answers' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1593 self.assertTrue('level' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1594 self.assertTrue('modality' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1595 self.assertTrue('query' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1596 self.assertTrue('retrieve' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1597 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1598 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1599
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1600 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a)
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1601 self.assertEqual(2, len(q))
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1602 self.assertTrue('PatientName' in q)
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1603 self.assertTrue('StudyDate' in q)
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1604 self.assertEqual('*NE*', q['PatientName'])
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1605 self.assertEqual('*', q['StudyDate'])
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1606
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1607 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1608
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1609 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1610 self.assertTrue('content' in s)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1611 self.assertTrue('retrieve' in s)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1612
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1613 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1614 self.assertEqual('887', s['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1615 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1616
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1617 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1618 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1619 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1620 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1621 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1622 self.assertEqual(2, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1623
112
9d09f6f21b60 added a test for issue #36
amazy
parents: 111
diff changeset
1624 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type)
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1625 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1626 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1627 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1628 self.assertEqual(4, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1629
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1630 DoDelete(_REMOTE, '/queries/%s' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1631 self.assertEqual(0, len(DoGet(_REMOTE, '/queries')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1632
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1633
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1634 def test_parent(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1635 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1636 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1637 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1638 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1639 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d'
107
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
1640 self.assertEqual(instance, u)
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1641
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1642 a = DoGet(_REMOTE, '/studies/%s/patient' % study)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1643 self.assertEqual('Patient', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1644 self.assertEqual(patient, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1645
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1646 a = DoGet(_REMOTE, '/series/%s/patient' % series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1647 self.assertEqual('Patient', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1648 self.assertEqual(patient, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1649
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1650 a = DoGet(_REMOTE, '/series/%s/study' % series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1651 self.assertEqual('Study', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1652 self.assertEqual(study, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1653
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1654 a = DoGet(_REMOTE, '/instances/%s/patient' % instance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1655 self.assertEqual('Patient', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1656 self.assertEqual(patient, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1657
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1658 a = DoGet(_REMOTE, '/instances/%s/study' % instance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1659 self.assertEqual('Study', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1660 self.assertEqual(study, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1661
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1662 a = DoGet(_REMOTE, '/instances/%s/series' % instance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1663 self.assertEqual('Series', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1664 self.assertEqual(series, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1665
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1666
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1667 def test_shanon(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1668 def Anonymize(instance, replacements = {}):
119
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1669 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1670 'Replace' : replacements,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1671 'Force' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1672 }, 'application/json')
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1673
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1674 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1675 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1676 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1677
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1678 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1679 ids = [ 'ozp00SjY2xG',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1680 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1681 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1682 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1683
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1684 a = ExtractDicomTags(Anonymize(u), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1685 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1686 self.assertNotEqual(ids[i], a[i])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1687 self.assertTrue(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1688
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1689 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1690 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1691 self.assertNotEqual(ids[i], a[i])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1692 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1693
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1694 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1695 self.assertEqual('instance', a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1696 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1697
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1698 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1699 self.assertEqual('series', a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1700 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1701
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1702 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1703 self.assertEqual('study', a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1704 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1705
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1706 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1707 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1708 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1709
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1710 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1711 'StudyInstanceUID' : 'study',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1712 'SeriesInstanceUID' : 'series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1713 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1714 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1715 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1716
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1717 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1718
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1719
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1720 def test_shanon_2(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1721 def Modify(instance, replacements = {}):
119
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1722 return DoPost(_REMOTE, '/instances/%s/modify' % instance, {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1723 'Replace' : replacements,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1724 'Force': True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1725 }, 'application/json')
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1726
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1727 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1728 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1729 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1730
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1731 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1732 ids = [ 'ozp00SjY2xG',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1733 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1734 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1735 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1736
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1737 a = ExtractDicomTags(Modify(u), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1738 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1739 self.assertEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1740 self.assertEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1741 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1742 self.assertEqual(0, len(a[4]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1743
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1744 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1745 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1746 self.assertEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1747 self.assertEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1748 self.assertEqual('instance', a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1749
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1750 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1751 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1752 self.assertEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1753 self.assertEqual('series', a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1754 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1755
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1756 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1757 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1758 self.assertEqual('study', a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1759 self.assertNotEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1760 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1761
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1762 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1763 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1764 self.assertNotEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1765 self.assertNotEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1766 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1767
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1768 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1769 'StudyInstanceUID' : 'study',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1770 'SeriesInstanceUID' : 'series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1771 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1772 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1773 self.assertEqual('study', a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1774 self.assertEqual('series', a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1775 self.assertEqual('instance', a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1776
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1777 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1778
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1779
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1780 def test_instances_tags(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1781 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1782 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1783 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1784 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1785
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1786 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1787 self.assertEqual(2, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1788 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1789 self.assertEqual('887', i[i.keys()[1]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1790
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1791 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1792 self.assertEqual(2, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1793 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1794 self.assertEqual('887', i[i.keys()[1]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1795
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1796 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1797 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1798 self.assertEqual(1, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1799 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1800
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1801 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1802 self.assertEqual(1, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1803 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1804
136
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1805 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1])
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1806 self.assertEqual(1, len(i))
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1807 self.assertEqual('887', i[i.keys()[0]]['0010,0020'])
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1808
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1809
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1810 def test_lookup(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1811 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1812 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1813
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1814 UploadInstance(_REMOTE, 'DummyCT.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1815
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1816 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1817 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1818 self.assertEqual('Patient', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1819 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1820 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1821
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1822 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1823 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1824 self.assertEqual('Study', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1825 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1826 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1827
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1828 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1829 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1830 self.assertEqual('Series', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1831 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1832 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1833
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1834 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1835 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1836 self.assertEqual('Instance', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1837 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1838 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1839
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1840 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1841 a = DoPost(_REMOTE, '/tools/lookup', '3113719P')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1842 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1843
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1844
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1845 def test_autorouting(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1846 knee1 = 'Knee/T1/IM-0001-0001.dcm'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1847 knee2 = 'Knee/T2/IM-0001-0002.dcm'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1848 other = 'Brainix/Flair/IM-0001-0001.dcm'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1849
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1850 # Check that this version is >= 0.8.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1851 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1852 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1853
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1854 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1855 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1856
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1857 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1858 DropOrthanc(_LOCAL)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1859 InstallLuaScript('Lua/Autorouting.lua')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1860 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1861 UploadInstance(_REMOTE, knee2)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1862 UploadInstance(_REMOTE, other)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1863 WaitEmpty(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1864 UninstallLuaCallbacks()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1865 self.assertEqual(3, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1866
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1867 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1868 DropOrthanc(_LOCAL)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1869 InstallLuaScript('Lua/AutoroutingConditional.lua')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1870 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1871 UploadInstance(_REMOTE, knee2)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1872 UploadInstance(_REMOTE, other)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1873 WaitEmpty(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1874 UninstallLuaCallbacks()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1875 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1876
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1877 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1878 DropOrthanc(_LOCAL)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1879 InstallLuaScript('Lua/AutoroutingModification.lua')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1880 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1881 WaitEmpty(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1882 UninstallLuaCallbacks()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1883 i = DoGet(_LOCAL, '/instances')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1884 self.assertEqual(1, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1885
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1886 with tempfile.NamedTemporaryFile(delete = True) as f:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1887 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1888 f.flush()
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
1889 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ])
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1890 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1891 self.assertEqual(None, re.search('"MilitaryRank"', routed))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1892 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag
17
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1893
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1894
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1895 def test_storescu_rf(self):
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1896 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID']
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1897 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1898 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain')
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1899 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
18
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1900
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1901
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1902 def test_anonymize_instance(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1903 def AnonymizeAndUpload(instanceId, parameters):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1904 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1905 'application/json'), 'application/dicom')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1906
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1907 def ModifyAndUpload(instanceId, parameters):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1908 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1909 'application/json'), 'application/dicom')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1910
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1911 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1912 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1913 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1914 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1915 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1916 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1917
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1918 b = AnonymizeAndUpload(a, '{}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1919 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1920 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1921
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1922 # Keep private tag (only OK since Orthanc 0.8.0)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1923 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1924 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1925 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1926
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1927 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1928 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1929 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1930
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1931 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1932 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1933 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1934
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1935 # Examples from the Wiki
118
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
1936 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}')
18
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1937 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1938 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1939 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1940 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1941 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1942 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1943 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1944 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1945
118
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
1946 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}')
18
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1947 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1948 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1949 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1950 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1951 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1952 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1953
118
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
1954 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}')
18
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1955 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1956 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1957 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1958 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1959 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1960 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1961
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1962
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1963 # Test modify non-existing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1964 i = DoPost(_REMOTE, '/tools/create-dicom',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1965 json.dumps({
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1966 'PatientName' : 'Jodogne',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1967 'Modality' : 'CT',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1968 }))['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1969
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1970 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1971 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1972 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1973
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1974 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1975 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1976 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1977 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1978
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1979
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1980 def test_incoming_jpeg(self):
61
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1981 def storescu(image, acceptUnknownSopClassUid):
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1982 if acceptUnknownSopClassUid:
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1983 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ]
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1984 else:
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1985 tmp = [ '-xs' ]
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1986
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1987 with open(os.devnull, 'w') as FNULL:
61
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1988 subprocess.check_call([ FindExecutable('storescu') ] + tmp +
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1989 [ _REMOTE['Server'], str(_REMOTE['DicomPort']),
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1990 GetDatabasePath(image) ],
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1991 stderr = FNULL)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1992
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1993 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1994 InstallLuaScript('Lua/TransferSyntaxDisable.lua')
61
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1995 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False))
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1996 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True))
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1997 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1998 InstallLuaScript('Lua/TransferSyntaxEnable.lua')
62
f9c4ce95756f removal of useless information
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 61
diff changeset
1999 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')")
61
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2000 storescu('Knix/Loc/IM-0001-0001.dcm', False)
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2001 storescu('UnknownSopClassUid.dcm', True)
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2002 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2003
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2004
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2005 def test_storescu_jpeg(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2006 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2007
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2008 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0'
64
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
2009 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID']
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
2010
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
2011 # This is JPEG lossless
136
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
2012 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value'])
64
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
2013 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID'])
136
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
2014 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010'])
64
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
2015
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2016 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm')
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2017 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm')
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2018
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2019 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2020 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2021 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2022 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ])
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2023 self.assertEqual(5, len(DoGet(_LOCAL, '/instances')))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2024
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2025 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports']))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2026
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2027 DropOrthanc(_REMOTE)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2028 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2029
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2030
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2031 def test_pixel_data(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2032 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2033 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2034 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2035
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2036 phenixSize = 358 * 512 * 2
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2037 colorSize = 1000 * 1000 * 3
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2038 jpegSize = 51918
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2039
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2040 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2041 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2042 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2043
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2044 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2045 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2046
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2047 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2048 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2049
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2050
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2051 def test_decode_brainix(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2052 brainix = [
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2053 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2054 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2055 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2056 ]
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2057 h = '6fb11b932d535c2be04beabd99793ff8'
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2058 maxValue = 426.0
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2059
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2060 truth = Image.open(GetDatabasePath('Formats/Brainix.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2061 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2062 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2063 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2064
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2065 truth2 = map(lambda x: min(255, x), truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2066 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2067 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2068
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2069 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2070 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2071 self.AssertSameImages(truth2, '/instances/%s/preview' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2072
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2073 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2074 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2075
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2076
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2077 def test_decode_color(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2078 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2079 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2080
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2081 for i in [ imagej, color ]:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2082 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2083 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2084
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2085 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2086 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2087
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2088 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2089 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2090
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2091
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2092 def test_decode_rf(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2093 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2094 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2095
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2096 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2097 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2098 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2099 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2100
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2101 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2102
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2103
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2104 def test_decode_multiframe(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2105 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2106
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2107 # Test the first frame
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2108 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2109 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2110 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2111 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2112 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2113 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2114
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2115 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2116
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2117 # Test the last frame
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2118 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2119 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2120
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2121
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2122 def test_decode_signed(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2123 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2124 minValue = -2000
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2125 maxValue = 4042
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2126
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2127 truth = Image.open(GetDatabasePath('Formats/SignedCT.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2128 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2129
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2130 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2131 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2132
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2133 truth3 = map(lambda x: 255 if x >= 256 else x, truth2)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2134 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2135
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2136 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2137 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2138 self.AssertSameImages(tmp, '/instances/%s/preview' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2139
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2140 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed)))
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2141
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2142
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
2143 def test_googlecode_issue_32(self):
92
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2144 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2145 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2146 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2147
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2148 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2149 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2150 self.assertEqual(u'Рентгенография', tags['SeriesDescription'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2151 self.assertEqual(u'Таз', tags['BodyPartExamined'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2152 self.assertEqual(u'Прямая', tags['ViewPosition'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2153
92
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2154 # Replay the same test using Latin1 as default encoding: This must fail
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2155 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2156
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2157 DoDelete(_REMOTE, '/instances/%s' % f)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2158 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID']
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2159 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2160 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription'])
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2161
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2162
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2163 def test_encodings(self):
23
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2164 # Latin-1 (ISO_IR 100)
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2165 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2166 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2167 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription'])
23
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2168
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2169 # Latin-2 (ISO_IR 101)
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2170 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID']
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2171 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a)
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2172 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format -
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2173 self.assertEqual('Imię i Nazwisko osoby opisującej',
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2174 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8'))
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2175
26
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2176
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2177 def test_storescu_custom_aet(self):
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2178 # This tests a feature introduced in Orthanc 0.9.1: "Custom
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2179 # setting of the local AET during C-Store SCU (both in Lua and
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2180 # in the REST API)."
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2181 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2182
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2183 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2184
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2185 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2186 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2187 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2188
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2189 j = DoPost(_REMOTE, '/modalities/orthanctest/store', {
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2190 'LocalAet' : 'YOP',
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2191 'Resources' : [ a['ID'], b['ID'] ]
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2192 })
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2193
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2194 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2195 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID']))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2196
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2197 DropOrthanc(_LOCAL)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2198 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2199
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2200 j = DoPost(_REMOTE, '/modalities/orthanctest/store', {
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2201 'Resources' : [ c['ID'] ]
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2202 })
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2203
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2204 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2205 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID']))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2206
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2207 DropOrthanc(_REMOTE)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2208 DropOrthanc(_LOCAL)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2209
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2210 InstallLuaScript('Lua/AutoroutingChangeAet.lua')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2211 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2212
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2213 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2214 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2215 WaitEmpty(_REMOTE)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2216 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2217 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID']))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2218
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2219 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2220 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2221 WaitEmpty(_REMOTE)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2222 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2223 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID']))
34
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2224
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2225 def test_resources_since_limit(self):
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2226 # Upload 16 instances
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2227 for i in range(4):
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2228 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2229 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2230 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2231 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2232
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2233 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2234 self.assertEqual(2, len(DoGet(_REMOTE, '/studies')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2235 self.assertEqual(4, len(DoGet(_REMOTE, '/series')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2236 self.assertEqual(16, len(DoGet(_REMOTE, '/instances')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2237
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2238 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2239 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2240
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2241 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2242 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2243 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2244 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2245 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2246 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2247 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2248 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2249 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2250 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2251 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2252 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2253 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2254 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2255 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2256
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2257 for limit in [ 1, 2, 3, 7, 16, 17 ]:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2258 s = {}
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2259 since = 0
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2260 while True:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2261 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2262 if len(t) == 0:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2263 break
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2264
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2265 since += len(t)
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2266 for i in t:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2267 s[i] = None
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2268
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2269 self.assertEqual(16, len(s))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2270 for instance in DoGet(_REMOTE, '/instances'):
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2271 self.assertTrue(instance in s)
36
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2272
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2273
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2274 def test_create_pdf(self):
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2275 # Upload 4 instances
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2276 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2277 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2278 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2279 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2280
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2281 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0'
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2282 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988'
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2283 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8'
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2284
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2285 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f:
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2286 pdf = f.read()
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2287
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2288 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2289 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2290 'Tags' : {
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2291 'PatientName' : 'Jodogne',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2292 'Modality' : 'CT',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2293 },
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2294 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2295 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2296
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2297 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2298 self.assertEqual('OT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip())
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2299
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2300 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2301 self.assertEqual(len(b), len(pdf) + 1)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2302 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0'))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2303
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2304 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2305 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2306 'Parent' : brainixPatient,
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2307 'Tags' : {
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2308 'PatientName' : 'Jodogne',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2309 }
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2310 })))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2311
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2312 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2313 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2314 'Parent' : brainixPatient,
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2315 'Tags' : { 'StudyDescription' : 'PDF^Patient' },
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2316 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2317 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2318
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2319 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2320
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2321 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2322 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2323 'Parent' : brainixStudy,
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2324 'Tags' : { 'SeriesDescription' : 'PDF^Study' },
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2325 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2326 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2327
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2328 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2329
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2330 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2331 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2332 'Parent' : brainixEpi,
37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 36
diff changeset
2333 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' },
36
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2334 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2335 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2336
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2337 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2338
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2339 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2340 self.assertEqual(len(b), len(pdf))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2341 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2342
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2343 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance))
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2344
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2345
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2346 def test_create_series(self):
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2347 i = DoPost(_REMOTE, '/tools/create-dicom',
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2348 json.dumps({
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2349 'Tags' : {
40
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2350 'SpecificCharacterSet' : 'ISO_IR 100',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2351 'PatientName' : 'Sébastien Jodogne',
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2352 'Modality' : 'CT',
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2353 },
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2354 'Content' : [
40
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2355 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2356 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2357 'Tags' : { 'ImageComments' : 'Tutu' }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2358 },
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2359 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=',
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2360 ]
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2361 }))
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2362
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2363 s = DoGet(_REMOTE, i['Path'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2364 self.assertEqual('Series', s['Type'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2365 self.assertEqual(s['ID'], i['ID'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2366 self.assertEqual(2, len(s['Instances']))
39
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 38
diff changeset
2367 self.assertEqual(2, s['ExpectedNumberOfInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 38
diff changeset
2368 self.assertEqual('Complete', s['Status'])
40
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2369
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2370 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2371 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2372 self.assertTrue('ImageComments' in a or 'ImageComments' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2373 if 'ImageComments' in a:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2374 self.assertEqual('Tutu', a['ImageComments'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2375 else:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2376 self.assertEqual('Tutu', b['ImageComments'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2377
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2378 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2379 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2380 'Sébastien Jodogne')
47
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2381
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2382
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2383 def test_create_binary(self):
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2384 binary = ''.join(map(chr, range(256)))
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2385 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary)
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2386 tags = {
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2387 'PatientName' : 'Jodogne',
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2388 '8899-8899' : encoded
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2389 }
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2390
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2391 i = DoPost(_REMOTE, '/tools/create-dicom',
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2392 json.dumps({
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2393 'Tags' : tags
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2394 }))
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2395
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2396 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2397 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip())
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2398
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2399 i = DoPost(_REMOTE, '/tools/create-dicom',
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2400 json.dumps({
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2401 'InterpretBinaryTags' : False,
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2402 'Tags' : tags
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2403 }))
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2404
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2405 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2406 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1])
48
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2407
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2408
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2409 def test_patient_ids_collision(self):
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2410 # Upload 3 instances from 3 different studies, but with the
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2411 # same PatientID
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2412 for i in range(3):
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2413 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2414
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2415 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2416 'Query' : { 'PatientName' : '*' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2417 self.assertEqual(1, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2418 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2419
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2420 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2421 'CaseSensitive' : True,
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2422 'Query' : { 'PatientName' : 'FOO\\HELLO' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2423 self.assertEqual(2, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2424
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2425 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2426 'CaseSensitive' : False,
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2427 'Query' : { 'PatientName' : 'Foo' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2428 self.assertEqual(1, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2429 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2430 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2431 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2432
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2433 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2434 'Query' : { 'PatientName' : '*' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2435 self.assertEqual(3, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2436 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2437 self.assertTrue('FOO^SERIES' in d)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2438 self.assertTrue('HELLO^SERIES' in d)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2439 self.assertTrue('WORLD^SERIES' in d)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2440
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2441 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2442 self.assertEqual(1, len(set(d)))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2443 self.assertEqual('COMMON', d[0])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2444
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2445 for i in a:
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2446 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription']
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2447 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName']
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2448 self.assertEqual('%s^SERIES' % p, d)
49
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2449
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2450
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2451 def test_bitbucket_issue_4(self):
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2452 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2453 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2454 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2455 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2456 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2457 UploadInstance(_REMOTE, 'Formats/Rle.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2458
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2459 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2460 self.assertEqual(6, len(DoGet(_REMOTE, '/instances')))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2461
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2462 p = DoGet(_REMOTE, '/patients')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2463 self.assertEqual(2, len(p))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2464 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0]))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2465 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1]))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2466 self.assertEqual(3, len(i1))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2467 self.assertEqual(3, len(i2))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2468
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2469 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3])
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2470
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2471 self.assertEqual(6, len(DoGet(_LOCAL, '/instances')))
50
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2472
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2473
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2474 def test_create_sequence(self):
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2475 i = DoPost(_REMOTE, '/tools/create-dicom',
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2476 json.dumps({
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2477 'Tags' : {
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2478 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2479 'PatientName': 'Jodogne^',
51
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2480 'ReferencedStudySequence': GenerateTestSequence(),
50
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2481 }
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2482 }))['ID']
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2483
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2484 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2485 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2486 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2487 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2488 self.assertEqual(u'Sébastien^'.encode('latin-1'),
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2489 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i))
51
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2490
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2491
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2492 def test_modify_sequence(self):
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2493 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID']
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2494 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i))
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2495
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2496 j = DoPost(_REMOTE, '/instances/%s/modify' % i,
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2497 json.dumps({
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2498 "Replace" : {
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2499 "PatientName" : "hello",
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2500 'ReferencedStudySequence': GenerateTestSequence(),
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2501 },
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2502 }),
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2503 'application/json')
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2504 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID']
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2505 DoDelete(_REMOTE, '/instances/%s' % i)
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2506
52
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2507 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j)))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2508
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2509
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2510 def test_compression(self):
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2511 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2512
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2513 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % i)[1]
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2514
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2515 # "StorageCompression" is enabled in the Orthanc to be tested,
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2516 # uncompress the data before running the test
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2517 if DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i) != 0:
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2518 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/uncompress' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2519
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2520 cs = DoGet(_REMOTE, '/statistics')['TotalDiskSize']
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2521 us = DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2522 size = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2523 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2524 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2525 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2526 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2527
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2528 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2529 self.assertTrue('compress' in ops)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2530 self.assertTrue('uncompress' in ops)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2531 self.assertTrue('is-compressed' in ops)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2532 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2533 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2534
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2535 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/compress' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2536 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2537 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2538 self.assertLess(cs, DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2539 self.assertEqual(us, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2540 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1]))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2541 self.assertGreater(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2542 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2543 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2544 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2545
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2546 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/uncompress' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2547 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2548 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2549 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2550 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2551 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2552 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2553 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2554 self.assertEqual(cs, DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2555 self.assertEqual(us, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
53
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2556
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2557
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2558 def test_ordered_slices(self):
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2559 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2560 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2561 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s)
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2562 self.assertEqual('Sequence', o['Type'])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2563 self.assertEqual(1, len(o['Dicom']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2564 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2565 self.assertEqual(76, len(o['Slices']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2566 for j in range(76):
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2567 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2568
68
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2569 self.assertEqual(1, len(o['SlicesShort']))
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2570 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2571 self.assertEqual(0, o['SlicesShort'][0][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2572 self.assertEqual(76, o['SlicesShort'][0][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2573
53
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2574 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2575 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2576 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2577 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2578 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s)
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2579
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2580 self.assertEqual('Volume', o['Type'])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2581 self.assertEqual(3, len(o['Dicom']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2582 self.assertEqual(3, len(o['Slices']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2583 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2584 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2585 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2586 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2587 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2588 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2589
68
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2590 self.assertEqual(3, len(o['SlicesShort']))
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2591 self.assertEqual(k, o['SlicesShort'][0][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2592 self.assertEqual(0, o['SlicesShort'][0][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2593 self.assertEqual(1, o['SlicesShort'][0][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2594 self.assertEqual(j, o['SlicesShort'][1][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2595 self.assertEqual(0, o['SlicesShort'][1][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2596 self.assertEqual(1, o['SlicesShort'][1][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2597 self.assertEqual(i, o['SlicesShort'][2][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2598 self.assertEqual(0, o['SlicesShort'][2][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2599 self.assertEqual(1, o['SlicesShort'][2][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2600
53
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2601 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2602 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2603 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2604 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s)
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2605
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2606 self.assertEqual('Sequence', o['Type'])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2607 self.assertEqual(2, len(o['Dicom']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2608 self.assertEqual(2, len(o['Slices']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2609 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2610 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2611 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2612 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1])
54
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2613
68
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2614 self.assertEqual(2, len(o['SlicesShort']))
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2615 self.assertEqual(i, o['SlicesShort'][0][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2616 self.assertEqual(0, o['SlicesShort'][0][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2617 self.assertEqual(1, o['SlicesShort'][0][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2618 self.assertEqual(j, o['SlicesShort'][1][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2619 self.assertEqual(0, o['SlicesShort'][1][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2620 self.assertEqual(1, o['SlicesShort'][1][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2621
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2622
54
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2623
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2624 def test_incoming_movescu_accession(self):
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2625 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2626
137
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
2627 # No matching patient, so no job is created
54
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2628 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2629 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ])
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2630 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2631 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ])
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2632 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
137
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
2633
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
2634 # 1 Matching patient, track the job
138
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
2635 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
2636 '--study',
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
2637 '-k', '0008,0052=STUDY',
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
2638 '-k', 'AccessionNumber=A10003245599'
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
2639 ])))
137
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
2640
54
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2641 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2642
55
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2643
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2644 def test_dicom_to_json(self):
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2645 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID']
60
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2646 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID']
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2647
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2648 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2649 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f:
80
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
2650 self.assertTrue(CompareTags(t, json.loads(f.read()), [
123
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
2651 # Tags for compatibility with DCMTK 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
2652 'RETIRED_OtherPatientIDs',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
2653 'OtherPatientIDs',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
2654 'ACR_NEMA_2C_VariablePixelDataGroupLength',
80
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
2655 ]))
55
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2656
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2657 t = DoGet(_REMOTE, '/instances/%s/tags' % i)
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2658 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f:
87
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
2659 self.assertTrue(CompareTags(t, json.loads(f.read()), [
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
2660 ]))
55
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2661
60
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2662 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j)
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2663 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f:
80
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
2664 self.assertTrue(CompareTags(t, json.loads(f.read()), [
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
2665 ]))
60
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2666
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2667 t = DoGet(_REMOTE, '/instances/%s/tags' % j)
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2668 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f:
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2669 a = json.loads(f.read())
65
09fc27e0899a patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
2670 aa = json.dumps(a).replace('2e+022', '2e+22')
09fc27e0899a patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
2671 tt = json.dumps(t).replace('2e+022', '2e+22')
09fc27e0899a patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
2672 self.assertEqual(aa, tt)
57
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2673
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2674
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2675 def test_batch_archive(self):
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2676 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2677 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2678 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2679 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2680 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2681 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2682 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2683 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2684
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2685 s = DoPost(_REMOTE, '/tools/create-archive', [ ])
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2686 z = zipfile.ZipFile(StringIO(s), "r")
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2687 self.assertEqual(0, len(z.namelist()))
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2688
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2689 # One patient
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2690 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ])
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2691 z = zipfile.ZipFile(StringIO(s), "r")
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2692 self.assertEqual(4, len(z.namelist()))
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2693
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2694 # One patient + twice its study + one series from other patient
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2695 s = DoPost(_REMOTE, '/tools/create-archive', [
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2696 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17',
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2697 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918',
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2698 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0'
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2699 ])
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2700 z = zipfile.ZipFile(StringIO(s), "r")
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2701 self.assertEqual(6, len(z.namelist()))
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2702
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2703 # One patient + one series + one instance
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2704 s = DoPost(_REMOTE, '/tools/create-archive', [
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2705 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17',
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2706 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0',
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2707 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87'
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2708 ])
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2709 z = zipfile.ZipFile(StringIO(s), "r")
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2710 self.assertEqual(7, len(z.namelist()))
59
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2711
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2712
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2713 def test_decode_brainix_as_jpeg(self):
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2714 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID']
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2715
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2716 j = GetImage(_REMOTE, '/instances/%s/preview' % i)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2717 self.assertEqual('PNG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2718 self.assertEqual(j.size[0], 256)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2719 self.assertEqual(j.size[1], 256)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2720
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2721 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' })
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2722 self.assertEqual('PNG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2723
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2724 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' })
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2725 self.assertEqual('PNG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2726
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2727 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' })
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2728 self.assertEqual('PNG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2729
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2730 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2731 self.assertEqual('JPEG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2732 self.assertEqual(j.size[0], 256)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2733 self.assertEqual(j.size[1], 256)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2734
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2735 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' }))
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2736 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }))
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2737 self.assertLess(a, b)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2738
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2739 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' })
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2740 self.assertEqual('JPEG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2741
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2742 # 16bit encoding is not supported with JPEG
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2743 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' }))
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2744 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' }))
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2745
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2746 # No matching content type
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2747 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' }))
69
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2748
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2749
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2750
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2751 def test_media_encodings(self):
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2752 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2753 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID']
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2754 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID']
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2755
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2756 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2])
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2757 z = zipfile.ZipFile(StringIO(tmp), "r")
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2758
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2759 self.assertEqual(4, len(z.namelist()))
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2760 self.assertTrue('IMAGES/IM0' in z.namelist())
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2761 self.assertTrue('IMAGES/IM1' in z.namelist())
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2762 self.assertTrue('IMAGES/IM2' in z.namelist())
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2763 self.assertTrue('DICOMDIR' in z.namelist())
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2764
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2765 try:
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2766 os.remove('/tmp/DICOMDIR')
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2767 except:
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2768 # The file does not exist
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2769 pass
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2770
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2771 z.extract('DICOMDIR', '/tmp')
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2772 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ],
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2773 stderr = subprocess.STDOUT).split('\n')
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2774
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2775 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ],
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2776 stderr = subprocess.STDOUT).split('\n')
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2777 self.assertEqual(1, len(a))
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2778 self.assertEqual('', a[0])
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2779
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2780 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ])
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2781 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None)
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2782 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None)
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2783 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None)
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2784
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2785 os.remove('/tmp/DICOMDIR')
71
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2786
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2787
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2788 def test_findscu_counters(self):
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2789 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm')
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2790 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm')
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2791 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm')
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2792
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2793 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2794 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2795 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2796 self.assertTrue('1 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2797
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2798 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2799 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2800 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2801 self.assertTrue('2 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2802
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2803 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2804 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2805 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2806 self.assertTrue('3 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2807
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2808 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2809 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2810 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2811 self.assertTrue('2 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2812
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2813 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2814 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2815 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2816 self.assertTrue('3 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2817
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2818 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2819 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2820 self.assertEqual(2, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2821 self.assertTrue('1 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2822 self.assertTrue('2 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2823
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2824 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2825 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2826 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2827 t = map(lambda x: x.strip(), s[0].split('\\'))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2828 self.assertTrue('PT' in t)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2829 self.assertTrue('CT' in t)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2830
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2831 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2832 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2833 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2834 t = map(lambda x: x.strip(), s[0].split('\\'))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2835 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2836 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2837
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2838
78
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2839 def test_decode_transfer_syntax(self):
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2840 def Check(t, md5):
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2841 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID']
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2842
89
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
2843 if t != '1.2.840.10008.1.2': # This file has no meta header
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
2844 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i)
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
2845 self.assertEqual(t, transferSyntax)
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
2846
78
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2847 if md5 == None:
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2848 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i))
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2849 else:
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2850 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i))
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2851 self.assertEqual(m, md5)
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2852
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2853 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2854 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2855 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2856 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2857 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2858 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2859 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2860 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2861 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2862 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2863 Check('1.2.840.10008.1.2.4.90', None) # JPEG-2000 image, not supported
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
2864 Check('1.2.840.10008.1.2.4.91', None) # JPEG-2000 image, not supported
79
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2865
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2866
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2867 def test_raw_frame(self):
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2868 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID']
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2869 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2870 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2871 self.assertEqual(512 * 512 * 2, len(a))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2872 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2873 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2874 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2875
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2876 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID']
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2877 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2878 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2879 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2880 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2881 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2882 self.assertEqual("L", im.mode)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2883 self.assertEqual(512, im.size[0])
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2884 self.assertEqual(512, im.size[1])
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2885
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2886 # Test an image with 2 JPEG frames spread over multiple fragments
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2887 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID']
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2888 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2889 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2890 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2891 self.assertEqual(69214, len(a))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2892 self.assertEqual(ComputeMD5(a), ComputeMD5(b))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2893 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2894 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2895 self.assertEqual("RGB", im.mode)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2896 self.assertEqual(512, im.size[0])
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2897 self.assertEqual(512, im.size[1])
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2898 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2899 self.assertEqual("RGB", im.mode)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2900 self.assertEqual(512, im.size[0])
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
2901 self.assertEqual(512, im.size[1])
81
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2902
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2903
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2904
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2905 def test_rest_movescu(self):
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2906 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2907
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2908 # Upload 4 instances
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2909 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2910 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm')
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2911 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2912 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2913
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2914 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2915 for p in DoGet(_REMOTE, '/patients'):
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2916 DoPost(_REMOTE, '/modalities/orthanctest/store', p)
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2917 DoDelete(_REMOTE, '/patients/%s' % p)
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2918
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2919 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2920
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2921 # Upload instance Brainix/Flair/IM-0001-0001.dcm
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2922 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Instance',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2923 'Resources' : [
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2924 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2925 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2926 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2927 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2928 }
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2929 ]})
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2930
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2931 # Upload series Brainix/Flair/*
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2932 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2933 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2934 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2935 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2936
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2937 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2938 'Resources' : [
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2939 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2940 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2941 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2942 }
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2943 ]})
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2944 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2945 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2946 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2947 self.assertEqual(2, len(DoGet(_REMOTE, '/instances')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2948
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2949 # Upload series Brainix/Epi/*
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2950 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2951 'Resources' : [
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2952 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2953 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2954 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2955 }
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2956 ]})
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2957 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2958 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2959 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2960 self.assertEqual(3, len(DoGet(_REMOTE, '/instances')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2961
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2962 # Upload study Knee/*
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2963 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2964 'Resources' : [
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2965 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2966 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2967 }
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2968 ]})
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2969 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2970 self.assertEqual(2, len(DoGet(_REMOTE, '/studies')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2971 self.assertEqual(3, len(DoGet(_REMOTE, '/series')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2972 self.assertEqual(4, len(DoGet(_REMOTE, '/instances')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2973
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2974 # Reset
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2975 for p in DoGet(_REMOTE, '/patients'):
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2976 DoDelete(_REMOTE, '/patients/%s' % p)
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2977
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2978 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2979
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2980
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2981 # Upload all at once
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2982 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2983 'Resources' : [
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2984 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2985 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2986 },
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2987 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2988 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2989 }
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2990 ]})
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2991 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2992 self.assertEqual(2, len(DoGet(_REMOTE, '/studies')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2993 self.assertEqual(3, len(DoGet(_REMOTE, '/series')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2994 self.assertEqual(4, len(DoGet(_REMOTE, '/instances')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
2995
86
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
2996
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
2997
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
2998 def test_reconstruct_json(self):
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
2999 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3000
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3001 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3002 first = DoGet(_REMOTE, '/instances/%s/tags' % instance)
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3003
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3004 self.assertEqual('TWINOW', first['0008,1010']['Value'])
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3005 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance)))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3006
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3007 # Cannot delete the "DICOM" attachment
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3008 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3009
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3010 # Can delete the "DICOM as JSON" attachment
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3011 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3012 self.assertTrue(type(r) is dict and len(r) == 0)
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3013
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3014 # Only the "DICOM" attachment subsists
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3015 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance)))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3016
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3017 # Cannot manually reconstruct the "DICOM as JSON" attachment
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3018 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello'))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3019
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3020 # Transparently reconstruct the "DICOM as JSON" attachment
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3021 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3022 second = DoGet(_REMOTE, '/instances/%s/tags' % instance)
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3023 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance)))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3024
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3025 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance)
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3026 self.assertEqual(str(first), str(second))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3027 self.assertEqual(str(first), str(third))
87
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3028
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3029
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3030 def test_reconstruct_json2(self):
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3031 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3032
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3033 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3034 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID']
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3035
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3036 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3037 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3038
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3039 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3040 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3041
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3042 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain')
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3043
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3044 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3045 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3046
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3047 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3048 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3049
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3050 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3051 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3052
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3053
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3054 def test_private_tags(self):
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3055 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID']
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3056 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3057 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3058 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3059
92
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3060
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3061 def test_findscu_encoding(self):
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3062 # Check out ../Database/Encodings/Generate.sh
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3063 TEST = u'Test-éüäöòДΘĝדصķћ๛ネİ'
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3064 ENCODINGS = {
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3065 'Arabic' : [ 'ISO_IR 127' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3066 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3067 'Cyrillic' : [ 'ISO_IR 144' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3068 'Greek' : [ 'ISO_IR 126' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3069 'Hebrew' : [ 'ISO_IR 138' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3070 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3071 'Latin1' : [ 'ISO_IR 100' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3072 'Latin2' : [ 'ISO_IR 101' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3073 'Latin3' : [ 'ISO_IR 109' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3074 'Latin4' : [ 'ISO_IR 110' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3075 'Latin5' : [ 'ISO_IR 148' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3076 'Thai' : [ 'ISO_IR 166', 'tis-620' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3077 'Utf8' : [ 'ISO_IR 192' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3078 }
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3079
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3080 for name in ENCODINGS.iterkeys():
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3081 if len(ENCODINGS[name]) == 1:
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3082 ENCODINGS[name].append(name.lower())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3083
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3084 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm')
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3085
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3086 for name in ENCODINGS.iterkeys():
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3087 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3088 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3089
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3090 i = CallFindScu([ '-k', '0008,0052=STUDY',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3091 '-k', 'SpecificCharacterSet',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3092 '-k', 'PatientName' ])
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3093
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3094 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3095 self.assertEqual(1, len(characterSet))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3096 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3097
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3098 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3099 self.assertEqual(1, len(patientName))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3100
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3101 expected = TEST.encode(ENCODINGS[name][1], 'ignore')
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3102 self.assertEqual(expected, patientName[0].strip())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3103
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3104
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3105 #for master in ENCODINGS:
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3106 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3107 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3108 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3109
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3110 for name in ENCODINGS:
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3111 DropOrthanc(_REMOTE)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3112 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1])
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3113
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3114 i = CallFindScu([ '-k', '0008,0052=STUDY',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3115 '-k', 'PatientID',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3116 '-k', 'SpecificCharacterSet',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3117 '-k', 'PatientName' ])
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3118 i = i.decode(ENCODINGS[master][1])
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3119
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3120 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3121 self.assertEqual(1, len(characterSet))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3122 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3123
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3124 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3125 self.assertEqual(1, len(patientId))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3126 self.assertEqual(ENCODINGS[name][1], patientId[0].strip())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3127
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3128 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3129 self.assertEqual(1, len(patientName))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3130
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3131 tmp = ENCODINGS[name][1]
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3132 expected = TEST.encode(tmp, 'ignore').decode(tmp)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3133 tmp = ENCODINGS[master][1]
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3134 expected = expected.encode(tmp, 'ignore').decode(tmp)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3135
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3136 self.assertEqual(expected, patientName[0].strip())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3137
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3138
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3139 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True,
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3140 'Level' : 'Study',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3141 'Query' : { }})
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3142 self.assertEqual(1, len(a))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3143
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3144 tmp = ENCODINGS[name][1]
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3145 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"])
96
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3146
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3147
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3148 def test_reconstruct(self):
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3149 def CompareMainDicomTag(expected, instance, level, tag):
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3150 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip())
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3151
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3152 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3153
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3154 studies = DoGet(_REMOTE, '/studies/')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3155 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3156 self.assertEqual(1, len(studies))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3157 self.assertEqual(1, len(DoGet(_REMOTE, '/series/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3158 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3159
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3160 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], {
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3161 "Replace" : {
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3162 "StudyDescription" : "hello",
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3163 "SeriesDescription" : "world",
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3164 "SOPClassUID" : "test",
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3165 "SOPInstanceUID" : "myid",
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3166 },
119
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
3167 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ],
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
3168 "Force" : True
96
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3169 })
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3170
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3171 instances = DoGet(_REMOTE, '/instances/')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3172 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3173 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3174 self.assertEqual(1, len(DoGet(_REMOTE, '/series/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3175 self.assertEqual(2, len(instances))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3176
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3177 b = instances[0] if instances[1] == a else instances[1]
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3178
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3179 CompareMainDicomTag('Knee (R)', a, 'study', 'StudyDescription')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3180 CompareMainDicomTag('AX. FSE PD', a, 'series', 'SeriesDescription')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3181 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3182 CompareMainDicomTag('myid', b, '', 'SOPInstanceUID')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3183 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % a).strip())
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3184 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % b).strip())
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3185
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3186 DoPost(_REMOTE, '/instances/%s/reconstruct' % b, {})
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3187
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3188 CompareMainDicomTag('hello', a, 'study', 'StudyDescription')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3189 CompareMainDicomTag('world', a, 'series', 'SeriesDescription')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3190 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID')
102
9671578fd4d3 added tests for Lua HttpPost/Put/Get/Delete methods
amazy
parents: 100
diff changeset
3191
104
7530eb50c3c4 renamed HttpPost.lua into HttpClient.lua + fix tests
amazy
parents: 102
diff changeset
3192 def test_httpClient_lua(self):
7530eb50c3c4 renamed HttpPost.lua into HttpClient.lua + fix tests
amazy
parents: 102
diff changeset
3193 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f:
102
9671578fd4d3 added tests for Lua HttpPost/Put/Get/Delete methods
amazy
parents: 100
diff changeset
3194 result = DoPost(_REMOTE, '/tools/execute-script', f.read(), 'application/lua')
9671578fd4d3 added tests for Lua HttpPost/Put/Get/Delete methods
amazy
parents: 100
diff changeset
3195
9671578fd4d3 added tests for Lua HttpPost/Put/Get/Delete methods
amazy
parents: 100
diff changeset
3196 self.assertIn('OK', result)
107
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3197
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3198
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3199 def test_bitbucket_issue_44(self):
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3200 # https://bitbucket.org/sjodogne/orthanc/issues/44/bad-interpretation-of-photometric
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3201 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3202 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm')
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3203
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3204 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3205 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm')
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3206
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3207 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3208 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm')
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3209
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3210 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7'
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3211 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2'
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3212 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab'
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3213 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20'
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3214
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3215 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]:
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3216 im = GetImage(_REMOTE, '/instances/%s/preview' % i)
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3217 self.assertEqual("L", im.mode)
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3218 self.assertEqual(2010, im.size[0])
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3219 self.assertEqual(2446, im.size[1])
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3220
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3221 # This is the chest image, with MONOCHROME1. Raw background is
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3222 # white (255), should be rendered as black (0) => invert
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3223 if i == monochrome1_jpeg:
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3224 # Add some tolerance because of JPEG destructive compression
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3225 self.assertGreater(10, im.getpixel((0,0)))
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3226 else:
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3227 self.assertEqual(0, im.getpixel((0,0)))
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3228
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3229 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2)
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3230 self.assertEqual("L", im.mode)
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3231 self.assertEqual(1572, im.size[0])
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3232 self.assertEqual(2010, im.size[1])
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3233
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3234 # This is the key image, with MONOCHROME2. Raw background is
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3235 # white (255), should be rendered as white (255)
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3236 self.assertEqual(255, im.getpixel((0,0)))
111
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3237
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3238
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3239 def test_bitbucket_issue_42(self):
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3240 # https://bitbucket.org/sjodogne/orthanc/issues/42/fails-to-modify-a-dicom-video-file
123
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
3241 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2
111
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3242 UploadInstance(_REMOTE, 'Issue42.dcm')['ID']
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3243 modified = DoPost(_REMOTE,
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3244 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify',
119
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
3245 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}',
111
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3246 'application/json')
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3247 self.assertTrue('PatientID' in modified)
113
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3248
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3249
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3250 def test_rest_find_limit(self):
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3251 # Check the "Since" and "Limit" parameters in URI "/tools/find"
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3252 # Related to issue 53: https://bitbucket.org/sjodogne/orthanc/issues/53
111
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3253
113
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3254 # Upload 6 instances
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3255 brainix = []
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3256 knee = []
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3257 for i in range(2):
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3258 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID'])
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3259 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID'])
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3260 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID'])
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3261
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3262 # Check using BRAINIX
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3263 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3264 'Query' : { 'PatientName' : 'B*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3265 'Limit' : 10 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3266 self.assertEqual(4, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3267
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3268 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3269 'Query' : { 'PatientName' : 'B*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3270 'Limit' : 4 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3271 self.assertEqual(4, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3272
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3273 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3274 'Query' : { 'PatientName' : 'B*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3275 'Since' : 2,
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3276 'Limit' : 4 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3277 self.assertEqual(2, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3278
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3279 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3280 'Query' : { 'PatientName' : 'B*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3281 'Limit' : 3 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3282 self.assertEqual(3, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3283
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3284 b = []
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3285 for i in range(4):
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3286 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3287 'Query' : { 'PatientName' : 'B*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3288 'Limit' : 1,
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3289 'Since' : i })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3290 self.assertEqual(1, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3291 b.append(a[0])
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3292
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3293 # Check whether the two sets are equal through symmetric difference
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3294 self.assertEqual(0, len(set(b) ^ set(brainix)))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3295
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3296 # Check using KNEE
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3297 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3298 'Query' : { 'PatientName' : 'K*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3299 'Limit' : 10 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3300 self.assertEqual(2, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3301
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3302 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3303 'Query' : { 'PatientName' : 'K*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3304 'Limit' : 2 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3305 self.assertEqual(2, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3306
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3307 b = []
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3308 for i in range(2):
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3309 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3310 'Query' : { 'PatientName' : 'K*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3311 'Limit' : 1,
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3312 'Since' : i })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3313 self.assertEqual(1, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3314 b.append(a[0])
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3315
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3316 self.assertEqual(0, len(set(b) ^ set(knee)))
115
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3317
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3318
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3319 def test_bitbucket_issue_46(self):
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3320 # "PHI remaining after anonymization"
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3321 # https://bitbucket.org/sjodogne/orthanc/issues/46
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3322
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3323 def GetAnonymizedTags(study, version):
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3324 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study,
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3325 { 'DicomVersion' : version },
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3326 'application/json') ['ID']
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3327 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3328 self.assertEqual(1, len(a))
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3329
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3330 instance = a[0]['ID']
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3331
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3332 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance))
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3333
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3334 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3335 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff'
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3336
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3337 # Add the 0032,1033 (Requesting Service) and the 0010,1060
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3338 # (Patient's Mother's Birth Name) tags
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3339 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy,
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3340 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}',
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3341 'application/json')['ID']
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3342
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3343 # Use Table E.1-1 from PS 3.15-2008
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3344 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3345 (instance, tags) = GetAnonymizedTags(newStudy, "2008")
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3346 self.assertTrue('0032,1033' in tags)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3347 self.assertTrue('0010,1060' in tags)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3348
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3349 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3350 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3351 (instance, tags) = GetAnonymizedTags(newStudy, "2017c")
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3352 self.assertFalse('0032,1033' in tags)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3353 self.assertFalse('0010,1060' in tags)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3354
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3355 t = {}
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3356 for (key, value) in tags.iteritems():
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3357 t[value['Name']] = value['Value']
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3358
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3359 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3360 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3361 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3362 self.assertFalse('SeriesDate' in t) # Type 3 tag => null
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3363 self.assertFalse('SeriesTime' in t) # Type 3 tag => null
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3364
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3365 with tempfile.NamedTemporaryFile(delete = True) as f:
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3366 # Run "dciodvfy" on the anonymized file to be sure it is still valid
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3367 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance))
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3368 f.flush()
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3369 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ],
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3370 stderr = subprocess.STDOUT).split('\n')
118
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3371
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3372
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3373 def test_bitbucket_issue_55(self):
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3374 def Run(modify, query):
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3375 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3376
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3377 operation = 'modify' if modify else 'anonymize'
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3378
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3379 self.assertRaises(Exception, lambda: DoPost(
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3380 _REMOTE, '/studies/%s/%s' % (study, operation), query))
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3381 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3382
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3383 query["Force"] = True
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3384 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path']
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3385 self.assertEqual(2, len(DoGet(_REMOTE, '/instances')))
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3386 DoDelete(_REMOTE, a)
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3387
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3388 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3389
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3390 UploadInstance(_REMOTE, 'DummyCT.dcm')
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3391 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0'
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3392
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3393 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3394 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3395 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3396
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3397 Run(False, { "Keep" : [ "StudyInstanceUID" ]})
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3398 Run(False, { "Keep" : [ "SeriesInstanceUID" ]})
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3399 Run(False, { "Keep" : [ "SOPInstanceUID" ]})
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3400
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3401 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3402 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3403 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3404
120
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3405
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3406 def test_bitbucket_issue_56(self):
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3407 # Case-insensitive matching over accents. This test assumes
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3408 # that the "CaseSensitivePN" configuration option of Orthanc
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3409 # is set to "false" (default value).
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3410 # https://bitbucket.org/sjodogne/orthanc/issues/56
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3411
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3412 def Check(name, expected, expectedSensitive):
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3413 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3414 '-k', '0008,0052=PATIENT',
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3415 '-k', 'PatientName=%s' % name ])
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3416 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3417 self.assertEqual(expected, len(patientNames))
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3418
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3419 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3420 'CaseSensitive' : False,
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3421 'Query' : { 'PatientName' : name }})
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3422 self.assertEqual(expected, len(a))
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3423
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3424 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3425 'CaseSensitive' : True,
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3426 'Query' : { 'PatientName' : name }})
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3427 self.assertEqual(expectedSensitive, len(a))
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3428
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3429 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm')
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3430
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3431 # WildcardConstraint
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3432 Check('TeSt*', 1, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3433 Check('TeSt-a*', 0, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3434 Check('TeSt-É*', 1, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3435 Check('TeSt-é*', 1, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3436 Check('Test-é*', 1, 1)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3437
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3438 # ListConstraint
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3439 Check('Test-éüäöò\\nope', 1, 1)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3440 Check('Test-ÉÜÄÖÒ\\nope', 1, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3441
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3442 # ValueConstraint
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3443 Check('Test-éüäöò', 1, 1)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3444 Check('Test-ÉÜÄÖÒ', 1, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3445
125
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3446
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3447 def test_gbk_alias(self):
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3448 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3449 # This test fails on Orthanc <= 1.3.0
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3450 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID']
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3451 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3452 self.assertEqual(tags['PatientName'], u'徐浩凯')
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3453 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心')
126
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3454
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3455
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3456 def test_long_tag(self):
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3457 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID']
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3458 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe'
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3459
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3460 tags = DoGet(_REMOTE, '/instances/%s/tags' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3461 self.assertTrue('0018,1020' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3462 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3463 self.assertEqual('TooLong', tags['0018,1020']['Type'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3464 self.assertEqual(None, tags['0018,1020']['Value'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3465
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3466 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3467 self.assertTrue('0018,1020' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3468 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3469 self.assertEqual('String', tags['0018,1020']['Type'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3470 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet'))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3471
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3472 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3473 self.assertTrue('SoftwareVersions' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3474 self.assertEqual(None, tags['SoftwareVersions'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3475 self.assertTrue('HeartRate' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3476 self.assertEqual(474, int(tags['HeartRate']))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3477
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3478 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3479 self.assertTrue('SoftwareVersions' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3480 self.assertEqual(None, tags['SoftwareVersions'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3481
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3482 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3483 self.assertTrue('SoftwareVersions' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3484 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet'))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3485
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3486 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3487 self.assertTrue('SoftwareVersions' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3488 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet'))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3489
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3490 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3491 self.assertEqual(1, len(tags))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3492 self.assertTrue(i in tags.keys())
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3493 self.assertTrue('0018,1020' in tags[i])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3494 self.assertEqual('TooLong', tags[i]['0018,1020']['Type'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3495
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3496 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3497 self.assertEqual(1, len(tags))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3498 self.assertTrue(i in tags.keys())
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3499 self.assertTrue('0018,1020' in tags[i])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3500 self.assertEqual('String', tags[i]['0018,1020']['Type'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3501 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet'))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3502
127
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3503
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3504 def test_extended_media(self):
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3505 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3506
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3507 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3508 self.assertEqual(2, len(z.namelist()))
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3509 self.assertTrue('IMAGES/IM0' in z.namelist())
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3510 self.assertTrue('DICOMDIR' in z.namelist())
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3511
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3512 try:
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3513 os.remove('/tmp/DICOMDIR')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3514 except:
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3515 # The file does not exist
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3516 pass
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3517
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3518 z.extract('DICOMDIR', '/tmp')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3519 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ],
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3520 stderr = subprocess.STDOUT).split('\n')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3521 self.assertEqual(5, len(a))
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3522 self.assertTrue(a[0].startswith('Warning'))
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3523 self.assertEqual('BasicDirectory', a[1])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3524 self.assertTrue('not present in standard DICOM IOD' in a[2])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3525 self.assertTrue('not present in standard DICOM IOD' in a[3])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3526 self.assertEqual('', a[4])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3527
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3528 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ],
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3529 stderr = subprocess.STDOUT).split('\n')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3530 self.assertEqual(1, len(a))
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3531 self.assertEqual('', a[0])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3532
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3533 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3534 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None)
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3535
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3536 # Check the presence of the series description (extended tag)
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3537 self.assertTrue(re.search('T1W_aTSE', a) != None)
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3538
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3539 os.remove('/tmp/DICOMDIR')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3540
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3541
132
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3542 def test_anonymize_relationships_1(self):
133
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3543 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3544 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')
132
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3545 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3546
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3547 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study,
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3548 '{}',
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3549 'application/json')['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3550
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3551 a = DoGet(_REMOTE, '/studies/%s/instances' % study)
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3552 self.assertEqual(2, len(a))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3553 a1 = a[0]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3554 a2 = a[1]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3555
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3556 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized)
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3557 self.assertEqual(2, len(b))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3558 b1 = b[0]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3559 b2 = b[1]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3560
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3561 SEQUENCE = '/instances/%s/content/ReferencedImageSequence'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3562 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3563 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3564 FRAME = '/instances/%s/content/FrameOfReferenceUID'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3565
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3566 self.assertEqual(DoGet(_REMOTE, FRAME % a1),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3567 DoGet(_REMOTE, FRAME % a2))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3568 self.assertEqual(DoGet(_REMOTE, FRAME % b1),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3569 DoGet(_REMOTE, FRAME % b2))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3570 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3571 DoGet(_REMOTE, FRAME % b1))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3572 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3573 DoGet(_REMOTE, FRAME % b2))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3574
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3575 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3576 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3577 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3578 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3579
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3580 for i in range(3):
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3581 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3582 DoGet(_REMOTE, SOP % (a2, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3583 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3584 DoGet(_REMOTE, SOP % (b2, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3585 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3586 DoGet(_REMOTE, SOP % (b1, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3587 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3588 DoGet(_REMOTE, SOP % (b2, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3589 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3590 DoGet(_REMOTE, CLASS % (b1, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3591 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3592 DoGet(_REMOTE, CLASS % (b2, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3593
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3594
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3595 def test_anonymize_relationships_2(self):
133
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3596 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3597 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm')
132
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3598 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3599
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3600 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study,
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3601 '{}',
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3602 'application/json')['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3603
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3604 a = DoGet(_REMOTE, '/studies/%s/instances' % study)
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3605 self.assertEqual(2, len(a))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3606 a1 = a[0]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3607 a2 = a[1]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3608
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3609 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized)
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3610 self.assertEqual(2, len(b))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3611 b1 = b[0]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3612 b2 = b[1]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3613
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3614 SEQUENCE = '/instances/%s/content/SourceImageSequence'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3615 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3616 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3617
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3618 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3619 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3620 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3621 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3622 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3623 DoGet(_REMOTE, SOP % (a2, 0)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3624 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3625 DoGet(_REMOTE, SOP % (b2, 0)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3626 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3627 DoGet(_REMOTE, SOP % (b1, 0)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3628 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3629 DoGet(_REMOTE, SOP % (b2, 0)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3630 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3631 DoGet(_REMOTE, CLASS % (b1, 0)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3632 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3633 DoGet(_REMOTE, CLASS % (b2, 0)))
133
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3634
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3635
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3636 def test_anonymize_relationships_3(self):
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3637 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3638 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3639 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3640
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3641 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study,
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3642 { "Keep" : [ "ContentSequence" ] }) ['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3643
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3644 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized)
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3645 self.assertEqual(2, len(a))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3646
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3647 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR':
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3648 sr2 = a[0]['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3649 mr2 = a[1]['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3650 else:
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3651 sr2 = a[1]['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3652 mr2 = a[0]['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3653
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3654 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1),
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3655 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3656 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1),
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3657 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3658
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3659 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3660 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3661 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3662 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3663 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3664 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3665
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3666 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3667 PATH2 = PATH1 + '/0/ReferencedSeriesSequence'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3668 PATH3 = PATH2 + '/0/ReferencedSOPSequence'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3669 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3670 PATH5 = PATH3 + '/0/ReferencedSOPClassUID'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3671
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3672 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3673 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3674 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3675 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1)
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3676 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00'))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3677 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00'))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3678
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3679 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3680 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3681 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3682 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3683
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3684 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00'))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3685 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00'))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3686 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00'))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3687
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3688 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3689 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3690 self.assertEqual(str(content1), str(content2))