Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 5833:58c549b881ae find-refactoring-clean
merged find-refactoring -> find-refactoring-clean
| author | Alain Mazy <am@orthanc.team> |
|---|---|
| date | Wed, 09 Oct 2024 11:01:11 +0200 |
| parents | 593e110de3d8 dd2af8692cbc |
| children | 7df3d533c294 |
| rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2024-2024 Orthanc Team SRL, Belgium |
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7 * Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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8 * |
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9 * This program is free software: you can redistribute it and/or |
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10 * modify it under the terms of the GNU General Public License as |
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11 * published by the Free Software Foundation, either version 3 of the |
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12 * License, or (at your option) any later version. |
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13 * |
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14 * This program is distributed in the hope that it will be useful, but |
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15 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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17 * General Public License for more details. |
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18 * |
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19 * You should have received a copy of the GNU General Public License |
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20 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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21 **/ |
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22 |
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23 |
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24 #include "../PrecompiledHeadersServer.h" |
| 5608 | 25 #include "../ResourceFinder.h" |
| 26 | |
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27 #include "OrthancRestApi.h" |
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28 |
| 4045 | 29 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
| 30 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
| 31 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
| 32 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
| 33 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
| 34 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
| 35 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
| 36 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
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37 #include "../../../OrthancFramework/Sources/Images/NumpyWriter.h" |
| 4045 | 38 #include "../../../OrthancFramework/Sources/Logging.h" |
| 39 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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40 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
| 4045 | 41 |
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42 #include "../OrthancConfiguration.h" |
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43 #include "../Search/DatabaseLookup.h" |
| 5828 | 44 #include "../Search/DatabaseMetadataConstraint.h" |
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45 #include "../ServerContext.h" |
| 2131 | 46 #include "../ServerToolbox.h" |
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47 #include "../SliceOrdering.h" |
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48 |
| 3687 | 49 // This "include" is mandatory for Release builds using Linux Standard Base |
| 50 #include <boost/math/special_functions/round.hpp> | |
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51 #include <boost/shared_ptr.hpp> |
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52 |
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53 /** |
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54 * This semaphore is used to limit the number of concurrent HTTP |
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55 * requests on CPU-intensive routes of the REST API, in order to |
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56 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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57 **/ |
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58 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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59 |
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60 |
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61 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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62 |
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63 static const char* const IGNORE_LENGTH = "ignore-length"; |
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64 static const char* const RECONSTRUCT_FILES = "ReconstructFiles"; |
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65 static const char* const LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS = "LimitToThisLevelMainDicomTags"; |
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66 static const char* const ARG_WHOLE = "whole"; |
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67 |
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68 |
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69 namespace Orthanc |
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70 { |
| 4415 | 71 static std::string GetDocumentationSampleResource(ResourceType type) |
| 72 { | |
| 73 switch (type) | |
| 74 { | |
| 75 case Orthanc::ResourceType_Instance: | |
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76 return "https://orthanc.uclouvain.be/demo/instances/6582b1c0-292ad5ab-ba0f088f-f7a1766f-9a29a54f"; |
| 4415 | 77 break; |
| 78 | |
| 79 case Orthanc::ResourceType_Series: | |
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80 return "https://orthanc.uclouvain.be/demo/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; |
| 4415 | 81 break; |
| 82 | |
| 83 case Orthanc::ResourceType_Study: | |
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84 return "https://orthanc.uclouvain.be/demo/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; |
| 4415 | 85 break; |
| 86 | |
| 87 case Orthanc::ResourceType_Patient: | |
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88 return "https://orthanc.uclouvain.be/demo/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; |
| 4415 | 89 break; |
| 90 | |
| 91 default: | |
| 92 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 93 } | |
| 94 } | |
| 95 | |
| 96 | |
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97 static void AnswerDicomAsJson(RestApiCall& call, |
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98 const Json::Value& dicom, |
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99 DicomToJsonFormat mode) |
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100 { |
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101 if (mode != DicomToJsonFormat_Full) |
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102 { |
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103 Json::Value simplified; |
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104 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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105 call.GetOutput().AnswerJson(simplified); |
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106 } |
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107 else |
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108 { |
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109 call.GetOutput().AnswerJson(dicom); |
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110 } |
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111 } |
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112 |
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113 |
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114 static void ParseSetOfTags(std::set<DicomTag>& target, |
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115 const RestApiGetCall& call, |
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116 const std::string& argument) |
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117 { |
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118 target.clear(); |
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119 |
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120 if (call.HasArgument(argument)) |
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121 { |
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122 std::vector<std::string> tags; |
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123 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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124 |
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125 for (size_t i = 0; i < tags.size(); i++) |
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126 { |
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127 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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128 } |
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129 } |
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130 } |
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131 |
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132 |
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133 static bool ExpandResource(Json::Value& target, |
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134 ServerContext& context, |
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135 ResourceType level, |
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136 const std::string& identifier, |
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137 DicomToJsonFormat format, |
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138 bool retrieveMetadata) |
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139 { |
| 5832 | 140 ResponseContentFlags responseContent = ResponseContentFlags_ExpandTrue; |
| 5829 | 141 |
| 142 if (retrieveMetadata) | |
| 143 { | |
| 144 responseContent = static_cast<ResponseContentFlags>(static_cast<uint32_t>(responseContent) | ResponseContentFlags_Metadata); | |
| 145 } | |
| 146 | |
| 147 ResourceFinder finder(level, responseContent); | |
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148 finder.SetOrthancId(level, identifier); |
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149 finder.SetRetrieveMetadata(retrieveMetadata); |
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150 |
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151 return finder.ExecuteOneResource(target, context, format, retrieveMetadata); |
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152 } |
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153 |
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154 |
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155 // List all the patients, studies, series or instances ---------------------- |
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156 |
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157 template <enum ResourceType resourceType> |
| 974 | 158 static void ListResources(RestApiGetCall& call) |
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159 { |
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160 if (call.IsDocumentation()) |
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161 { |
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162 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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163 OrthancRestApi::DocumentRequestedTags(call); |
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164 |
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165 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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166 call.GetDocumentation() |
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167 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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168 .SetSummary("List the available " + resources) |
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169 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
| 4403 | 170 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
| 171 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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172 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
| 4403 | 173 "If present, retrieve detailed information about the individual " + resources, false) |
| 4404 | 174 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 175 "about the reported " + resources + " (if `expand` argument is provided)") | |
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176 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/" + resources + "?since=0&limit=2", true); |
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177 return; |
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178 } |
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179 |
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180 // TODO-FIND: include the FindRequest options parsing in a method (parse from get-arguments and from post payload) |
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181 // TODO-FIND: support other values for expand like expand=MainDicomTags,Labels,Parent,SeriesStatus |
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182 const bool expand = (call.HasArgument("expand") && |
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183 call.GetBooleanArgument("expand", true)); |
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184 |
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185 std::set<DicomTag> requestedTags; |
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186 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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187 |
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188 ResourceFinder finder(resourceType, (expand ? ResponseContentFlags_ExpandTrue : ResponseContentFlags_ID)); |
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189 finder.AddRequestedTags(requestedTags); |
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190 |
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191 if (call.HasArgument("limit") || |
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192 call.HasArgument("since")) |
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193 { |
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194 if (!call.HasArgument("limit")) |
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195 { |
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196 throw OrthancException(ErrorCode_BadRequest, |
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197 "Missing \"limit\" argument for GET request against: " + |
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198 call.FlattenUri()); |
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199 } |
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200 |
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201 if (!call.HasArgument("since")) |
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202 { |
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203 throw OrthancException(ErrorCode_BadRequest, |
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204 "Missing \"since\" argument for GET request against: " + |
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205 call.FlattenUri()); |
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206 } |
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207 |
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208 uint64_t since = boost::lexical_cast<uint64_t>(call.GetArgument("since", "")); |
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209 uint64_t limit = boost::lexical_cast<uint64_t>(call.GetArgument("limit", "")); |
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210 finder.SetLimitsSince(since); |
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211 finder.SetLimitsCount(limit); |
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212 } |
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213 |
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214 Json::Value answer; |
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215 finder.Execute(answer, OrthancRestApi::GetContext(call), |
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216 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), false /* no "Metadata" field */); |
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217 call.GetOutput().AnswerJson(answer); |
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218 } |
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219 |
| 4409 | 220 |
| 221 | |
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222 template <enum ResourceType resourceType> |
| 974 | 223 static void GetSingleResource(RestApiGetCall& call) |
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224 { |
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225 if (call.IsDocumentation()) |
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226 { |
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227 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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228 OrthancRestApi::DocumentRequestedTags(call); |
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229 |
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230 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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231 call.GetDocumentation() |
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232 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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233 .SetSummary("Get information about some " + resource) |
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234 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 235 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 4409 | 236 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
| 237 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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238 return; |
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239 } |
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240 |
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241 std::set<DicomTag> requestedTags; |
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242 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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243 |
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244 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
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245 |
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246 ResourceFinder finder(resourceType, ResponseContentFlags_ExpandTrue); |
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247 finder.AddRequestedTags(requestedTags); |
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248 finder.SetOrthancId(resourceType, call.GetUriComponent("id", "")); |
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249 |
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250 Json::Value json; |
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251 if (finder.ExecuteOneResource(json, OrthancRestApi::GetContext(call), format, false /* no "Metadata" field */)) |
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252 { |
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253 call.GetOutput().AnswerJson(json); |
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254 } |
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255 } |
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256 |
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257 template <enum ResourceType resourceType> |
| 974 | 258 static void DeleteSingleResource(RestApiDeleteCall& call) |
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259 { |
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260 if (call.IsDocumentation()) |
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261 { |
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262 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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263 call.GetDocumentation() |
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264 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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265 .SetSummary("Delete some " + resource) |
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266 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 267 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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268 return; |
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269 } |
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270 |
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271 Json::Value remainingAncestor; |
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272 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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273 { |
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274 call.GetOutput().AnswerJson(remainingAncestor); |
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275 } |
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276 } |
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277 |
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278 |
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279 // Get information about a single patient ----------------------------------- |
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280 |
| 974 | 281 static void IsProtectedPatient(RestApiGetCall& call) |
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282 { |
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283 if (call.IsDocumentation()) |
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284 { |
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285 call.GetDocumentation() |
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286 .SetTag("Patients") |
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287 .SetSummary("Is the patient protected against recycling?") |
| 4404 | 288 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
| 4403 | 289 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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290 return; |
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291 } |
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292 |
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293 std::string publicId = call.GetUriComponent("id", ""); |
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294 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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295 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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296 } |
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297 |
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298 |
| 974 | 299 static void SetPatientProtection(RestApiPutCall& call) |
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300 { |
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301 if (call.IsDocumentation()) |
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302 { |
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303 call.GetDocumentation() |
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304 .SetTag("Patients") |
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305 .SetSummary("Protect/Unprotect a patient against recycling") |
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306 .SetDescription("Protects a patient by sending `1` or `true` in the payload request. " |
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307 "Unprotects a patient by sending `0` or `false` in the payload requests. " |
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308 "More info: https://orthanc.uclouvain.be/book/faq/features.html#recycling-protection") |
| 4404 | 309 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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310 return; |
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311 } |
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312 |
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313 ServerContext& context = OrthancRestApi::GetContext(call); |
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314 |
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315 std::string publicId = call.GetUriComponent("id", ""); |
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316 |
|
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317 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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318 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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319 } |
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320 |
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321 |
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322 // Get information about a single instance ---------------------------------- |
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323 |
| 974 | 324 static void GetInstanceFile(RestApiGetCall& call) |
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325 { |
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326 static const char* const TRANSCODE = "transcode"; |
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327 |
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328 if (call.IsDocumentation()) |
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329 { |
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330 call.GetDocumentation() |
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331 .SetTag("Instances") |
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332 .SetSummary("Download DICOM") |
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333 .SetDescription("Download one DICOM instance") |
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334 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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335 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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336 .SetHttpGetArgument(TRANSCODE, RestApiCallDocumentation::Type_String, |
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337 "If present, the DICOM file will be transcoded to the provided " |
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338 "transfer syntax: https://orthanc.uclouvain.be/book/faq/transcoding.html", false) |
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339 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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340 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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341 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
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342 return; |
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343 } |
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344 |
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345 ServerContext& context = OrthancRestApi::GetContext(call); |
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346 |
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347 std::string publicId = call.GetUriComponent("id", ""); |
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348 |
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349 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
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350 if (accept != call.GetHttpHeaders().end()) |
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351 { |
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352 // New in Orthanc 1.5.4 |
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353 try |
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354 { |
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355 MimeType mime = StringToMimeType(accept->second.c_str()); |
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356 |
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357 if (mime == MimeType_DicomWebJson || |
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358 mime == MimeType_DicomWebXml) |
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359 { |
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360 DicomWebJsonVisitor visitor; |
|
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361 |
|
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362 { |
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363 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
810772486249
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364 locker.GetDicom().Apply(visitor); |
|
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365 } |
|
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366 |
|
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367 if (mime == MimeType_DicomWebJson) |
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368 { |
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369 std::string s = visitor.GetResult().toStyledString(); |
|
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370 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
|
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371 } |
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372 else |
|
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373 { |
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374 std::string xml; |
|
810772486249
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375 visitor.FormatXml(xml); |
|
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376 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
|
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377 } |
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378 |
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|
379 return; |
|
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380 } |
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381 } |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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|
382 catch (OrthancException&) |
|
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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383 { |
|
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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384 } |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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|
385 } |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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diff
changeset
|
386 |
|
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
387 if (call.HasArgument(TRANSCODE)) |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
388 { |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
389 std::string source; |
| 5427 | 390 std::string attachmentId; |
|
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
391 std::string transcoded; |
| 5427 | 392 context.ReadDicom(source, attachmentId, publicId); |
| 393 | |
| 394 if (context.TranscodeWithCache(transcoded, source, publicId, attachmentId, GetTransferSyntax(call.GetArgument(TRANSCODE, "")))) | |
|
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
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diff
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|
395 { |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
396 call.GetOutput().AnswerBuffer(transcoded, MimeType_Dicom); |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
397 } |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
398 } |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
399 else |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
400 { |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
401 // return the attachment without any transcoding |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
402 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
403 } |
|
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
404 } |
|
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
405 |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
406 |
| 974 | 407 static void ExportInstanceFile(RestApiPostCall& call) |
|
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
408 { |
| 4421 | 409 if (call.IsDocumentation()) |
| 410 { | |
| 411 call.GetDocumentation() | |
| 412 .SetTag("Instances") | |
| 413 .SetSummary("Write DICOM onto filesystem") | |
|
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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parents:
5185
diff
changeset
|
414 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running. This is insecure for " |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
415 "Orthanc servers that are remotely accessible since one could overwrite any system file. " |
|
5275
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
416 "Since Orthanc 1.12.0, this route is disabled by default, but can be enabled using " |
|
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
417 "the `RestApiWriteToFileSystemEnabled` configuration option.") |
| 4421 | 418 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
| 419 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
| 420 return; | |
| 421 } | |
| 422 | |
|
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
423 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
424 |
|
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
425 if (!context.IsRestApiWriteToFileSystemEnabled()) |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
426 { |
|
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New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
427 LOG(ERROR) << "The URI /instances/../export is disallowed for security, " |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
428 << "check your configuration option `RestApiWriteToFileSystemEnabled`"; |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
429 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
430 return; |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
431 } |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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5185
diff
changeset
|
432 |
|
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
433 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
434 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
435 std::string dicom; |
| 2124 | 436 context.ReadDicom(dicom, publicId); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
437 |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
438 std::string target; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
439 call.BodyToString(target); |
| 2140 | 440 SystemToolbox::WriteFile(dicom, target); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
441 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
442 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
443 } |
|
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
444 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
445 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
446 template <DicomToJsonFormat format> |
|
5647
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
447 static void GetInstanceTagsInternal(RestApiGetCall& call, |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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diff
changeset
|
448 bool whole) |
|
751
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parents:
diff
changeset
|
449 { |
|
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parents:
diff
changeset
|
450 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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parents:
diff
changeset
|
451 |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
452 std::string publicId = call.GetUriComponent("id", ""); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
453 |
|
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
454 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
455 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
5647
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
456 |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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parents:
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diff
changeset
|
457 if (whole) |
|
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
458 { |
|
5647
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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parents:
5640
diff
changeset
|
459 // This is new in Orthanc 1.12.4. Reference: |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
460 // https://discourse.orthanc-server.org/t/private-tags-with-group-7fe0-are-not-provided-via-rest-api/4744 |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
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5640
diff
changeset
|
461 const DicomToJsonFlags flags = static_cast<DicomToJsonFlags>(DicomToJsonFlags_Default & ~DicomToJsonFlags_StopAfterPixelData); |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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parents:
5640
diff
changeset
|
462 |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
463 Json::Value answer; |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
464 |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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parents:
5640
diff
changeset
|
465 { |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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parents:
5640
diff
changeset
|
466 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
467 locker.GetDicom().DatasetToJson(answer, format, flags, |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
468 ORTHANC_MAXIMUM_TAG_LENGTH, ignoreTagLength); |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
469 } |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
470 |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
471 call.GetOutput().AnswerJson(answer); |
|
751
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472 } |
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473 else |
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474 { |
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475 if (format != DicomToJsonFormat_Full || |
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476 !ignoreTagLength.empty()) |
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477 { |
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478 Json::Value full; |
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479 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
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480 AnswerDicomAsJson(call, full, format); |
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481 } |
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482 else |
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483 { |
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484 // This path allows one to avoid the JSON decoding if no |
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485 // simplification is asked, and if no "ignore-length" argument |
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486 // is present |
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487 Json::Value full; |
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488 context.ReadDicomAsJson(full, publicId); |
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489 call.GetOutput().AnswerJson(full); |
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490 } |
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491 } |
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492 } |
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493 |
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494 |
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495 static void DocumentGetInstanceTags(RestApiGetCall& call) |
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496 { |
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497 call.GetDocumentation() |
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498 .SetTag("Instances") |
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499 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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500 .SetHttpGetArgument( |
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501 IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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502 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
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503 .SetHttpGetArgument( |
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504 ARG_WHOLE, RestApiCallDocumentation::Type_Boolean, "Whether to read the whole DICOM file from the " |
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505 "storage area (new in Orthanc 1.12.4). If set to \"false\" (default value), the DICOM file is read " |
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506 "until the pixel data tag (7fe0,0010) to optimize access to storage. Setting the option " |
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507 "to \"true\" provides access to the DICOM tags stored after the pixel data tag.", false) |
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508 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value"); |
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509 } |
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510 |
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511 |
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512 static void GetInstanceTags(RestApiGetCall& call) |
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513 { |
| 4404 | 514 if (call.IsDocumentation()) |
| 515 { | |
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516 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
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517 DocumentGetInstanceTags(call); |
| 4404 | 518 call.GetDocumentation() |
| 519 .SetSummary("Get DICOM tags") | |
| 520 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
| 521 "combines hexadecimal tags with human-readable description.") | |
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522 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
| 4404 | 523 return; |
| 524 } | |
| 525 | |
|
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526 const bool whole = call.GetBooleanArgument(ARG_WHOLE, false); |
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527 |
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528 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
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529 { |
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530 case DicomToJsonFormat_Human: |
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531 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call, whole); |
|
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532 break; |
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533 |
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534 case DicomToJsonFormat_Short: |
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535 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call, whole); |
|
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536 break; |
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537 |
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538 case DicomToJsonFormat_Full: |
|
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539 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call, whole); |
|
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540 break; |
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541 |
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542 default: |
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543 throw OrthancException(ErrorCode_InternalError); |
|
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544 } |
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545 } |
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|
546 |
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547 |
|
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548 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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549 { |
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550 if (call.IsDocumentation()) |
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551 { |
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552 DocumentGetInstanceTags(call); |
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553 call.GetDocumentation() |
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554 .SetSummary("Get human-readable tags") |
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555 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
|
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556 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
|
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557 return; |
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558 } |
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559 else |
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560 { |
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561 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call, call.GetBooleanArgument(ARG_WHOLE, false)); |
|
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562 } |
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563 } |
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564 |
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|
565 |
| 974 | 566 static void ListFrames(RestApiGetCall& call) |
|
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567 { |
| 4414 | 568 if (call.IsDocumentation()) |
| 569 { | |
| 570 call.GetDocumentation() | |
| 571 .SetTag("Instances") | |
| 572 .SetSummary("List available frames") | |
| 573 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
| 574 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 575 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
|
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576 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); |
| 4414 | 577 return; |
| 578 } | |
| 579 | |
|
1950
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580 std::string publicId = call.GetUriComponent("id", ""); |
|
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581 |
|
1950
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582 unsigned int numberOfFrames; |
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583 |
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584 { |
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585 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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586 numberOfFrames = locker.GetDicom().GetFramesCount(); |
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587 } |
|
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588 |
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589 Json::Value result = Json::arrayValue; |
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590 for (unsigned int i = 0; i < numberOfFrames; i++) |
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591 { |
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592 result.append(i); |
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593 } |
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594 |
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595 call.GetOutput().AnswerJson(result); |
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596 } |
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597 |
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598 |
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599 namespace |
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600 { |
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601 class ImageToEncode |
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602 { |
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603 private: |
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604 std::unique_ptr<ImageAccessor>& image_; |
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605 ImageExtractionMode mode_; |
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606 bool invert_; |
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607 MimeType format_; |
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608 std::string answer_; |
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609 |
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610 public: |
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611 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
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612 ImageExtractionMode mode, |
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613 bool invert) : |
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614 image_(image), |
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615 mode_(mode), |
| 4205 | 616 invert_(invert), |
| 617 format_(MimeType_Binary) | |
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618 { |
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619 } |
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620 |
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621 void Answer(RestApiOutput& output) |
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622 { |
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623 output.AnswerBuffer(answer_, format_); |
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624 } |
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625 |
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626 void EncodeUsingPng() |
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627 { |
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628 format_ = MimeType_Png; |
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629 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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630 } |
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631 |
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632 void EncodeUsingPam() |
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633 { |
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634 format_ = MimeType_Pam; |
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635 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
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636 } |
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637 |
|
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638 void EncodeUsingJpeg(uint8_t quality) |
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639 { |
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640 format_ = MimeType_Jpeg; |
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641 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
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642 } |
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643 }; |
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644 |
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645 class EncodePng : public HttpContentNegociation::IHandler |
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646 { |
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647 private: |
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648 ImageToEncode& image_; |
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649 |
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650 public: |
| 4205 | 651 explicit EncodePng(ImageToEncode& image) : image_(image) |
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652 { |
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653 } |
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654 |
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655 virtual void Handle(const std::string& type, |
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656 const std::string& subtype, |
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657 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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658 { |
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659 assert(type == "image"); |
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660 assert(subtype == "png"); |
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661 image_.EncodeUsingPng(); |
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662 } |
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663 }; |
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664 |
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665 class EncodePam : public HttpContentNegociation::IHandler |
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666 { |
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667 private: |
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668 ImageToEncode& image_; |
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669 |
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670 public: |
| 4205 | 671 explicit EncodePam(ImageToEncode& image) : image_(image) |
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672 { |
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673 } |
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674 |
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|
675 virtual void Handle(const std::string& type, |
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676 const std::string& subtype, |
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677 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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678 { |
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679 assert(type == "image"); |
| 2780 | 680 assert(subtype == "x-portable-arbitrarymap"); |
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681 image_.EncodeUsingPam(); |
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682 } |
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683 }; |
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|
684 |
|
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685 class EncodeJpeg : public HttpContentNegociation::IHandler |
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686 { |
|
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687 private: |
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688 ImageToEncode& image_; |
|
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689 unsigned int quality_; |
|
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690 |
|
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691 public: |
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692 EncodeJpeg(ImageToEncode& image, |
|
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693 const RestApiGetCall& call) : |
|
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694 image_(image) |
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695 { |
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696 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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697 bool ok = false; |
|
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698 |
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699 try |
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700 { |
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701 quality_ = boost::lexical_cast<unsigned int>(v); |
| 1847 | 702 ok = (quality_ >= 1 && quality_ <= 100); |
|
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703 } |
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704 catch (boost::bad_lexical_cast&) |
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705 { |
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706 } |
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707 |
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708 if (!ok) |
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709 { |
| 2955 | 710 throw OrthancException( |
| 711 ErrorCode_BadRequest, | |
| 712 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
|
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713 } |
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714 } |
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715 |
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716 virtual void Handle(const std::string& type, |
|
5338
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717 const std::string& subtype, |
|
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718 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
|
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719 { |
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720 assert(type == "image"); |
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721 assert(subtype == "jpeg"); |
|
1902
8b0ee8d5e6d0
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722 image_.EncodeUsingJpeg(quality_); |
|
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723 } |
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724 }; |
|
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725 } |
|
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726 |
|
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|
727 |
|
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|
728 namespace |
|
3600
4066998150ef
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|
729 { |
|
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730 class IDecodedFrameHandler : public boost::noncopyable |
|
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731 { |
|
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732 public: |
|
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733 virtual ~IDecodedFrameHandler() |
|
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734 { |
|
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735 } |
|
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|
736 |
|
4769
9da6ca57a977
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737 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
|
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738 virtual void Handle(RestApiGetCall& call, |
|
3712
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replacing std::auto_ptr by std::unique_ptr
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739 std::unique_ptr<ImageAccessor>& decoded, |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
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740 const ParsedDicomFile* dicom, |
|
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741 unsigned int frame) = 0; |
|
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742 |
|
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743 virtual bool RequiresDicomTags() const = 0; |
|
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744 |
|
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745 static void Apply(RestApiGetCall& call, |
|
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746 IDecodedFrameHandler& handler, |
|
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747 ImageExtractionMode mode /* for generation of documentation */, |
|
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748 bool isRendered /* for generation of documentation */) |
|
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749 { |
|
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750 if (call.IsDocumentation()) |
|
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751 { |
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752 std::string m; |
|
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753 if (!isRendered) |
|
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754 { |
|
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755 switch (mode) |
|
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756 { |
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757 case ImageExtractionMode_Preview: |
|
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758 m = "preview"; |
|
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759 break; |
|
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760 case ImageExtractionMode_UInt8: |
|
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761 m = "uint8"; |
|
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762 break; |
|
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763 case ImageExtractionMode_UInt16: |
|
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764 m = "uint16"; |
|
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765 break; |
|
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766 case ImageExtractionMode_Int16: |
|
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767 m = "int16"; |
|
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768 break; |
|
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|
769 default: |
|
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770 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
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771 } |
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772 } |
|
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|
773 |
|
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774 std::string description; |
|
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|
775 std::string verb = (isRendered ? "Render" : "Decode"); |
|
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|
776 |
|
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777 if (call.HasUriComponent("frame")) |
|
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778 { |
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779 description = verb + " one frame of interest from the given DICOM instance."; |
|
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780 call.GetDocumentation() |
|
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781 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
|
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782 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
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|
783 } |
|
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|
784 else |
|
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|
785 { |
|
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|
786 description = verb + " the first frame of the given DICOM instance."; |
|
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|
787 call.GetDocumentation() |
|
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|
788 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
|
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789 } |
|
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|
790 |
|
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|
791 if (isRendered) |
|
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|
792 { |
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|
793 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
|
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diff
changeset
|
794 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
|
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parents:
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diff
changeset
|
795 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
|
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diff
changeset
|
796 call.GetDocumentation() |
|
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diff
changeset
|
797 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
|
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diff
changeset
|
798 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
|
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parents:
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diff
changeset
|
799 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
|
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documenting generation of images
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parents:
4405
diff
changeset
|
800 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
|
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documenting generation of images
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parents:
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diff
changeset
|
801 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
802 } |
|
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parents:
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diff
changeset
|
803 else |
|
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documenting generation of images
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parents:
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diff
changeset
|
804 { |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
805 switch (mode) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
806 { |
|
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documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
807 case ImageExtractionMode_Preview: |
|
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documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
808 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
809 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
810 case ImageExtractionMode_UInt8: |
|
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documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
811 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
812 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
813 case ImageExtractionMode_UInt16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
814 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
815 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
816 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
817 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
818 "Negative values must be interpreted according to two's complement."); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
819 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
820 default: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
821 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
822 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
823 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
824 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
825 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
826 .SetTag("Instances") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
827 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
828 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
829 .SetHttpGetArgument("returnUnsupportedImage", RestApiCallDocumentation::Type_Boolean, "Returns an unsupported.png placeholder image if unable to provide the image instead of returning a 415 HTTP error (defaults to false)", false) |
|
4406
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
830 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
831 .AddAnswerType(MimeType_Png, "PNG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
832 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
833 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
834 .SetDescription(description); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
835 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
836 return; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
837 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
838 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
839 ServerContext& context = OrthancRestApi::GetContext(call); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
840 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
841 std::string frameId = call.GetUriComponent("frame", "0"); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
842 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
843 unsigned int frame; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
844 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
845 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
846 frame = boost::lexical_cast<unsigned int>(frameId); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
847 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
848 catch (boost::bad_lexical_cast&) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
849 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
850 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
851 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
852 |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
853 std::unique_ptr<ImageAccessor> decoded; |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
854 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
855 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
856 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
857 std::string publicId = call.GetUriComponent("id", ""); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
858 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
859 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
860 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
861 if (decoded.get() == NULL) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
862 { |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
863 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
864 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
865 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
866 |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
867 if (handler.RequiresDicomTags()) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
868 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
869 /** |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
870 * Retrieve a summary of the DICOM tags, which is |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
871 * necessary to deal with MONOCHROME1 photometric |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
872 * interpretation, and with windowing parameters. |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
873 **/ |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
874 ServerContext::DicomCacheLocker locker(context, publicId); |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
875 handler.Handle(call, decoded, &locker.GetDicom(), frame); |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
876 } |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
877 else |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
878 { |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
879 handler.Handle(call, decoded, NULL, frame); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
880 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
881 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
882 catch (OrthancException& e) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
883 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
884 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
885 e.GetErrorCode() == ErrorCode_UnknownResource) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
886 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
887 // The frame number is out of the range for this DICOM |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
888 // instance, the resource is not existent |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
889 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
890 else |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
891 { |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
892 if (call.HasArgument("returnUnsupportedImage")) |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
893 { |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
894 std::string root = ""; |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
895 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
896 { |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
897 root += "../"; |
|
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898 } |
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|
899 |
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|
900 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
|
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901 } |
|
4804
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|
902 else |
|
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|
903 { |
|
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|
904 call.GetOutput().SignalError(HttpStatus_415_UnsupportedMediaType); |
|
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|
905 } |
|
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|
906 } |
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|
907 return; |
|
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|
908 } |
|
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|
909 |
|
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|
910 } |
|
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|
911 |
|
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|
912 |
|
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changeset
|
913 static void DefaultHandler(RestApiGetCall& call, |
|
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|
914 std::unique_ptr<ImageAccessor>& decoded, |
|
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|
915 ImageExtractionMode mode, |
|
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|
916 bool invert) |
|
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|
917 { |
|
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|
918 ImageToEncode image(decoded, mode, invert); |
|
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|
919 |
|
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|
920 HttpContentNegociation negociation; |
|
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|
921 EncodePng png(image); |
|
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|
922 negociation.Register(MIME_PNG, png); |
|
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923 |
|
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|
924 EncodeJpeg jpeg(image, call); |
|
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|
925 negociation.Register(MIME_JPEG, jpeg); |
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926 |
|
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|
927 EncodePam pam(image); |
|
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|
928 negociation.Register(MIME_PAM, pam); |
|
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|
929 |
|
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|
930 if (negociation.Apply(call.GetHttpHeaders())) |
|
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|
931 { |
|
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|
932 image.Answer(call.GetOutput()); |
|
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933 } |
|
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|
934 } |
|
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|
935 }; |
|
3600
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|
936 |
|
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|
937 |
|
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|
938 class GetImageHandler : public IDecodedFrameHandler |
|
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|
939 { |
|
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|
940 private: |
|
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|
941 ImageExtractionMode mode_; |
|
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|
942 |
|
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|
943 public: |
| 4205 | 944 explicit GetImageHandler(ImageExtractionMode mode) : |
|
3683
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|
945 mode_(mode) |
|
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|
946 { |
|
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|
947 } |
|
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|
948 |
|
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changeset
|
949 virtual void Handle(RestApiGetCall& call, |
|
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|
950 std::unique_ptr<ImageAccessor>& decoded, |
|
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|
951 const ParsedDicomFile* dicom, |
|
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|
952 unsigned int frame) ORTHANC_OVERRIDE |
|
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|
953 { |
|
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|
954 bool invert = false; |
|
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|
955 |
|
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|
956 if (mode_ == ImageExtractionMode_Preview) |
|
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|
957 { |
|
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|
958 if (dicom == NULL) |
|
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changeset
|
959 { |
|
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changeset
|
960 throw OrthancException(ErrorCode_InternalError); |
|
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diff
changeset
|
961 } |
|
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changeset
|
962 |
|
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|
963 DicomMap tags; |
|
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changeset
|
964 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
|
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changeset
|
965 |
|
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changeset
|
966 DicomImageInformation info(tags); |
|
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967 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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|
968 } |
|
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|
969 |
|
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changeset
|
970 DefaultHandler(call, decoded, mode_, invert); |
|
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|
971 } |
|
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|
972 |
|
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|
973 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
|
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|
974 { |
|
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|
975 return mode_ == ImageExtractionMode_Preview; |
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976 } |
|
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|
977 }; |
|
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changeset
|
978 |
|
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changeset
|
979 |
|
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changeset
|
980 class RenderedFrameHandler : public IDecodedFrameHandler |
|
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|
981 { |
|
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|
982 private: |
|
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|
983 static void GetUserArguments(double& windowWidth /* inout */, |
|
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|
984 double& windowCenter /* inout */, |
|
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|
985 unsigned int& argWidth, |
|
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|
986 unsigned int& argHeight, |
|
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|
987 bool& smooth, |
| 4205 | 988 const RestApiGetCall& call) |
|
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|
989 { |
|
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|
990 static const char* ARG_WINDOW_CENTER = "window-center"; |
|
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|
991 static const char* ARG_WINDOW_WIDTH = "window-width"; |
|
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|
992 static const char* ARG_WIDTH = "width"; |
|
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|
993 static const char* ARG_HEIGHT = "height"; |
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|
994 static const char* ARG_SMOOTH = "smooth"; |
|
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|
995 |
|
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|
996 if (call.HasArgument(ARG_WINDOW_WIDTH) && |
|
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|
997 !SerializationToolbox::ParseDouble(windowWidth, call.GetArgument(ARG_WINDOW_WIDTH, ""))) |
|
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|
998 { |
|
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|
999 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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|
1000 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
|
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|
1001 } |
|
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|
1002 |
|
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|
1003 if (call.HasArgument(ARG_WINDOW_CENTER) && |
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|
1004 !SerializationToolbox::ParseDouble(windowCenter, call.GetArgument(ARG_WINDOW_CENTER, ""))) |
|
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1005 { |
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1006 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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|
1007 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
|
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1008 } |
|
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1009 |
|
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|
1010 argWidth = 0; |
|
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|
1011 argHeight = 0; |
|
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|
1012 |
|
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|
1013 if (call.HasArgument(ARG_WIDTH)) |
|
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|
1014 { |
|
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|
1015 try |
|
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|
1016 { |
|
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1017 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
|
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1018 if (tmp < 0) |
|
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1019 { |
|
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1020 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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1021 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
|
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1022 } |
|
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1023 else |
|
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1024 { |
|
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1025 argWidth = static_cast<unsigned int>(tmp); |
|
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1026 } |
|
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1027 } |
|
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1028 catch (boost::bad_lexical_cast&) |
|
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1029 { |
|
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1030 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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|
1031 "Bad value for argument: " + std::string(ARG_WIDTH)); |
|
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|
1032 } |
|
3683
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|
1033 } |
|
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|
1034 |
|
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|
1035 if (call.HasArgument(ARG_HEIGHT)) |
|
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|
1036 { |
|
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|
1037 try |
|
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changeset
|
1038 { |
|
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1039 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
|
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1040 if (tmp < 0) |
|
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|
1041 { |
|
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|
1042 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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1043 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
|
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1044 } |
|
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1045 else |
|
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|
1046 { |
|
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1047 argHeight = static_cast<unsigned int>(tmp); |
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1048 } |
|
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1049 } |
|
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|
1050 catch (boost::bad_lexical_cast&) |
|
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1051 { |
|
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1052 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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1053 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
|
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1054 } |
|
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1055 } |
|
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|
1056 |
|
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1057 smooth = false; |
|
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1058 |
|
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1059 if (call.HasArgument(ARG_SMOOTH)) |
|
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|
1060 { |
|
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
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diff
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|
1061 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
|
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1062 } |
|
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1063 } |
|
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1064 |
|
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1065 |
|
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|
1066 public: |
|
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1067 virtual void Handle(RestApiGetCall& call, |
|
3712
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replacing std::auto_ptr by std::unique_ptr
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1068 std::unique_ptr<ImageAccessor>& decoded, |
|
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|
1069 const ParsedDicomFile* dicom, |
|
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|
1070 unsigned int frame) ORTHANC_OVERRIDE |
|
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1071 { |
|
4769
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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changeset
|
1072 if (dicom == NULL) |
|
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changeset
|
1073 { |
|
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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changeset
|
1074 throw OrthancException(ErrorCode_InternalError); |
|
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changeset
|
1075 } |
|
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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changeset
|
1076 |
|
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|
1077 PhotometricInterpretation photometric; |
|
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1078 const bool invert = (dicom->LookupPhotometricInterpretation(photometric) && |
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|
1079 photometric == PhotometricInterpretation_Monochrome1); |
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1080 |
|
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|
1081 double rescaleIntercept, rescaleSlope, windowCenter, windowWidth; |
|
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changeset
|
1082 dicom->GetRescale(rescaleIntercept, rescaleSlope, frame); |
|
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changeset
|
1083 dicom->GetDefaultWindowing(windowCenter, windowWidth, frame); |
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changeset
|
1084 |
|
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|
1085 unsigned int argWidth, argHeight; |
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|
1086 bool smooth; |
|
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|
1087 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
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|
1088 |
|
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|
1089 unsigned int targetWidth = decoded->GetWidth(); |
|
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|
1090 unsigned int targetHeight = decoded->GetHeight(); |
| 3686 | 1091 |
| 1092 if (decoded->GetWidth() != 0 && | |
| 1093 decoded->GetHeight() != 0) | |
| 1094 { | |
| 1095 float ratio = 1; | |
| 1096 | |
|
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|
1097 if (argWidth != 0 && |
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|
1098 argHeight != 0) |
| 3686 | 1099 { |
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1100 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
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1101 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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|
1102 ratio = std::min(ratioX, ratioY); |
| 3686 | 1103 } |
|
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1104 else if (argWidth != 0) |
| 3686 | 1105 { |
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1106 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
| 3686 | 1107 } |
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1108 else if (argHeight != 0) |
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|
1109 { |
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1110 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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|
1111 } |
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|
1112 |
|
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changeset
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1113 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
|
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changeset
|
1114 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
| 3686 | 1115 } |
| 1116 | |
|
5054
255b02c68908
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
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1117 if (decoded->GetFormat() == PixelFormat_RGB24 || decoded->GetFormat() == PixelFormat_RGB48) |
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1118 { |
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1119 if (targetWidth == decoded->GetWidth() && |
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1120 targetHeight == decoded->GetHeight()) |
|
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1121 { |
|
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1122 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
|
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1123 } |
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1124 else |
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1125 { |
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replacing std::auto_ptr by std::unique_ptr
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1126 std::unique_ptr<ImageAccessor> resized( |
|
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1127 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
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1128 |
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1129 if (smooth && |
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1130 (targetWidth < decoded->GetWidth() || |
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1131 targetHeight < decoded->GetHeight())) |
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1132 { |
|
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1133 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
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1134 } |
|
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1135 |
|
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1136 ImageProcessing::Resize(*resized, *decoded); |
|
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1137 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
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1138 } |
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1139 } |
| 3686 | 1140 else |
| 1141 { | |
|
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1142 // Grayscale image: (1) convert to Float32, (2) apply |
|
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1143 // windowing to get a Grayscale8, (3) possibly resize |
|
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1144 |
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1145 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
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1146 ImageProcessing::Convert(converted, *decoded); |
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1147 |
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1148 // Avoid divisions by zero |
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1149 if (windowWidth <= 1.0f) |
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1150 { |
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1151 windowWidth = 1; |
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1152 } |
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1153 |
|
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1154 if (std::abs(rescaleSlope) <= 0.0001) |
|
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1155 { |
|
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1156 rescaleSlope = 0.0001; |
|
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1157 } |
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1158 |
|
4777
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Support detection of windowing and rescale in Philips multiframe images
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1159 const double scaling = 255.0 * rescaleSlope / windowWidth; |
|
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1160 const double offset = (rescaleIntercept - windowCenter + windowWidth / 2.0) / rescaleSlope; |
|
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1161 |
|
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1162 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
|
4777
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1163 ImageProcessing::ShiftScale(*rescaled, converted, static_cast<float>(offset), static_cast<float>(scaling), false); |
|
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1164 |
|
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1165 if (targetWidth == decoded->GetWidth() && |
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1166 targetHeight == decoded->GetHeight()) |
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1167 { |
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1168 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
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1169 } |
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1170 else |
|
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1171 { |
|
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1172 std::unique_ptr<ImageAccessor> resized( |
|
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1173 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
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1174 |
|
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1175 if (smooth && |
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1176 (targetWidth < decoded->GetWidth() || |
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1177 targetHeight < decoded->GetHeight())) |
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1178 { |
|
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1179 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
|
3690
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1180 } |
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1181 |
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1182 ImageProcessing::Resize(*resized, *rescaled); |
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1183 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
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1184 } |
| 3686 | 1185 } |
|
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1186 } |
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1187 |
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1188 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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1189 { |
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1190 return true; |
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1191 } |
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1192 }; |
|
3600
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1193 } |
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1194 |
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1195 |
|
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1196 template <enum ImageExtractionMode mode> |
| 974 | 1197 static void GetImage(RestApiGetCall& call) |
|
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1198 { |
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1199 Semaphore::Locker locker(throttlingSemaphore_); |
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1200 |
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1201 GetImageHandler handler(mode); |
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1202 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
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1203 } |
|
1906
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1204 |
|
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1205 |
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1206 static void GetRenderedFrame(RestApiGetCall& call) |
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1207 { |
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1208 Semaphore::Locker locker(throttlingSemaphore_); |
|
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1209 |
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|
1210 RenderedFrameHandler handler; |
|
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1211 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
|
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1212 } |
|
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1213 |
|
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1214 |
|
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1215 static void DocumentSharedNumpy(RestApiGetCall& call) |
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1216 { |
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1217 call.GetDocumentation() |
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1218 .SetUriArgument("id", "Orthanc identifier of the DICOM resource of interest") |
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1219 .SetHttpGetArgument("compress", RestApiCallDocumentation::Type_Boolean, "Compress the file as `.npz`", false) |
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1220 .SetHttpGetArgument("rescale", RestApiCallDocumentation::Type_Boolean, |
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1221 "On grayscale images, apply the rescaling and return floating-point values", false) |
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1222 .AddAnswerType(MimeType_PlainText, "Numpy file: https://numpy.org/devdocs/reference/generated/numpy.lib.format.html"); |
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1223 } |
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1224 |
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1225 |
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1226 namespace |
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1227 { |
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1228 class NumpyVisitor : public boost::noncopyable |
|
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1229 { |
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1230 private: |
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1231 bool rescale_; |
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1232 unsigned int depth_; |
|
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|
1233 unsigned int currentDepth_; |
| 4858 | 1234 unsigned int width_; |
|
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1235 unsigned int height_; |
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1236 PixelFormat format_; |
|
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1237 ChunkedBuffer buffer_; |
|
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1238 |
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1239 public: |
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1240 NumpyVisitor(unsigned int depth /* can be zero if 2D frame */, |
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1241 bool rescale) : |
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1242 rescale_(rescale), |
|
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1243 depth_(depth), |
| 4858 | 1244 currentDepth_(0), |
| 1245 width_(0), // dummy initialization | |
| 1246 height_(0), // dummy initialization | |
| 1247 format_(PixelFormat_Grayscale8) // dummy initialization | |
|
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1248 { |
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1249 } |
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1250 |
| 4858 | 1251 void WriteFrame(const ParsedDicomFile& dicom, |
|
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1252 unsigned int frame) |
|
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1253 { |
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1254 std::unique_ptr<ImageAccessor> decoded(dicom.DecodeFrame(frame)); |
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1255 |
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1256 if (decoded.get() == NULL) |
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1257 { |
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1258 throw OrthancException(ErrorCode_NotImplemented, "Cannot decode DICOM instance"); |
|
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1259 } |
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1260 |
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1261 if (currentDepth_ == 0) |
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1262 { |
|
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1263 width_ = decoded->GetWidth(); |
|
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1264 height_ = decoded->GetHeight(); |
|
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1265 format_ = decoded->GetFormat(); |
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1266 } |
|
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1267 else if (width_ != decoded->GetWidth() || |
|
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1268 height_ != decoded->GetHeight()) |
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1269 { |
|
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1270 throw OrthancException(ErrorCode_IncompatibleImageSize, "The size of the frames varies across the instance(s)"); |
|
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1271 } |
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1272 else if (format_ != decoded->GetFormat()) |
|
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1273 { |
|
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1274 throw OrthancException(ErrorCode_IncompatibleImageFormat, "The pixel format of the frames varies across the instance(s)"); |
|
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1275 } |
|
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1276 |
|
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1277 if (rescale_ && |
|
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1278 decoded->GetFormat() != PixelFormat_RGB24) |
|
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1279 { |
|
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1280 if (currentDepth_ == 0) |
|
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1281 { |
|
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|
1282 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, PixelFormat_Float32); |
|
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1283 } |
|
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|
1284 |
|
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|
1285 double rescaleIntercept, rescaleSlope; |
|
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1286 dicom.GetRescale(rescaleIntercept, rescaleSlope, frame); |
|
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|
1287 |
|
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|
1288 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
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1289 ImageProcessing::Convert(converted, *decoded); |
|
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|
1290 ImageProcessing::ShiftScale2(converted, static_cast<float>(rescaleIntercept), static_cast<float>(rescaleSlope), false); |
|
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1291 |
|
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|
1292 NumpyWriter::WritePixels(buffer_, converted); |
|
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1293 } |
|
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1294 else |
|
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1295 { |
|
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1296 if (currentDepth_ == 0) |
|
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1297 { |
|
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1298 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, format_); |
|
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1299 } |
|
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|
1300 |
|
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1301 NumpyWriter::WritePixels(buffer_, *decoded); |
|
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1302 } |
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1303 |
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1304 currentDepth_ ++; |
|
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1305 } |
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1306 |
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|
1307 void Answer(RestApiOutput& output, |
|
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1308 bool compress) |
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1309 { |
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1310 if ((depth_ == 0 && currentDepth_ != 1) || |
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1311 (depth_ != 0 && currentDepth_ != depth_)) |
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1312 { |
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1313 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
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1314 } |
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1315 else |
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1316 { |
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1317 std::string answer; |
|
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1318 NumpyWriter::Finalize(answer, buffer_, compress); |
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1319 output.AnswerBuffer(answer, MimeType_Binary); |
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1320 } |
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1321 } |
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1322 }; |
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1323 } |
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1324 |
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1325 |
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1326 static void GetNumpyFrame(RestApiGetCall& call) |
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1327 { |
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1328 if (call.IsDocumentation()) |
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1329 { |
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1330 DocumentSharedNumpy(call); |
|
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1331 call.GetDocumentation() |
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1332 .SetTag("Instances") |
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1333 .SetSummary("Decode frame for numpy") |
|
4836
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1334 .SetDescription("Decode one frame of interest from the given DICOM instance, for use with numpy in Python. " |
|
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1335 "The numpy array has 3 dimensions: (height, width, color channel).") |
|
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|
1336 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
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1337 } |
|
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1338 else |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1339 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1340 const std::string instanceId = call.GetUriComponent("id", ""); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1341 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1342 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1343 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1344 uint32_t frame; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1345 if (!SerializationToolbox::ParseUnsignedInteger32(frame, call.GetUriComponent("frame", "0"))) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1346 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1347 throw OrthancException(ErrorCode_ParameterOutOfRange, "Expected an unsigned integer for the \"frame\" argument"); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1348 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1349 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1350 NumpyVisitor visitor(0 /* no depth, 2D frame */, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1351 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1352 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1353 Semaphore::Locker throttling(throttlingSemaphore_); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1354 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1355 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1356 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1357 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1358 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1359 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1360 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1361 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1362 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1363 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1364 static void GetNumpyInstance(RestApiGetCall& call) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1365 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1366 if (call.IsDocumentation()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1367 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1368 DocumentSharedNumpy(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1369 call.GetDocumentation() |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1370 .SetTag("Instances") |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1371 .SetSummary("Decode instance for numpy") |
|
4836
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1372 .SetDescription("Decode the given DICOM instance, for use with numpy in Python. " |
|
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1373 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1374 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1375 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1376 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1377 const std::string instanceId = call.GetUriComponent("id", ""); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1378 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1379 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1380 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1381 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1382 Semaphore::Locker throttling(throttlingSemaphore_); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1383 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1384 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1385 const unsigned int depth = locker.GetDicom().GetFramesCount(); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1386 if (depth == 0) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1387 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1388 throw OrthancException(ErrorCode_BadFileFormat, "Empty DICOM instance"); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1389 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1390 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1391 NumpyVisitor visitor(depth, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1392 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1393 for (unsigned int frame = 0; frame < depth; frame++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1394 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1395 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1396 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1397 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1398 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1399 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1400 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1401 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1402 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1403 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1404 static void GetNumpySeries(RestApiGetCall& call) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1405 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1406 if (call.IsDocumentation()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1407 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1408 DocumentSharedNumpy(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1409 call.GetDocumentation() |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1410 .SetTag("Series") |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1411 .SetSummary("Decode series for numpy") |
|
4836
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1412 .SetDescription("Decode the given DICOM series, for use with numpy in Python. " |
|
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1413 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1414 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1415 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1416 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1417 const std::string seriesId = call.GetUriComponent("id", ""); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1418 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1419 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1420 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1421 Semaphore::Locker throttling(throttlingSemaphore_); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1422 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1423 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1424 SliceOrdering ordering(index, seriesId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1425 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1426 unsigned int depth = 0; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1427 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1428 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1429 depth += ordering.GetFramesCount(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1430 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1431 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1432 ServerContext& context = OrthancRestApi::GetContext(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1433 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1434 NumpyVisitor visitor(depth, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1435 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1436 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1437 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1438 const std::string& instanceId = ordering.GetInstanceId(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1439 unsigned int framesCount = ordering.GetFramesCount(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1440 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1441 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1442 ServerContext::DicomCacheLocker locker(context, instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1443 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1444 for (unsigned int frame = 0; frame < framesCount; frame++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1445 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1446 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1447 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1448 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1449 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1450 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1451 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1452 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1453 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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4831
diff
changeset
|
1454 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1455 |
| 974 | 1456 static void GetMatlabImage(RestApiGetCall& call) |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1457 { |
| 4414 | 1458 if (call.IsDocumentation()) |
| 1459 { | |
| 1460 std::string description; | |
| 1461 | |
| 1462 if (call.HasUriComponent("frame")) | |
| 1463 { | |
| 1464 description = "Decode one frame of interest from the given DICOM instance"; | |
| 1465 call.GetDocumentation() | |
| 1466 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
| 1467 } | |
| 1468 else | |
| 1469 { | |
| 1470 description = "Decode the first frame of the given DICOM instance."; | |
| 1471 } | |
| 1472 | |
| 1473 call.GetDocumentation() | |
| 1474 .SetTag("Instances") | |
| 1475 .SetSummary("Decode frame for Matlab") | |
| 1476 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
1477 "https://orthanc.uclouvain.be/book/faq/matlab.html") |
| 4414 | 1478 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
| 1479 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
| 1480 return; | |
| 1481 } | |
| 1482 | |
|
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1483 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1484 |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1485 ServerContext& context = OrthancRestApi::GetContext(call); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1486 |
|
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1487 std::string frameId = call.GetUriComponent("frame", "0"); |
|
87791ebc1f50
download matlab images
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diff
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|
1488 |
|
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1489 unsigned int frame; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1490 try |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1491 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1492 frame = boost::lexical_cast<unsigned int>(frameId); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1493 } |
|
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1494 catch (boost::bad_lexical_cast&) |
|
874
87791ebc1f50
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diff
changeset
|
1495 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1496 return; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1497 } |
|
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1498 |
|
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1499 std::string publicId = call.GetUriComponent("id", ""); |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1500 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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831
diff
changeset
|
1501 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1502 if (decoded.get() == NULL) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1503 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1504 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1505 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1506 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1507 else |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1508 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1509 std::string result; |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1510 decoded->ToMatlabString(result); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1511 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1512 } |
|
874
87791ebc1f50
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diff
changeset
|
1513 } |
|
87791ebc1f50
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diff
changeset
|
1514 |
|
87791ebc1f50
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diff
changeset
|
1515 |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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2382
diff
changeset
|
1516 template <bool GzipCompression> |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1517 static void GetRawFrame(RestApiGetCall& call) |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1518 { |
| 4408 | 1519 if (call.IsDocumentation()) |
| 1520 { | |
| 1521 call.GetDocumentation() | |
| 1522 .SetTag("Instances") | |
| 1523 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
| 1524 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
| 1525 "bypassing image decoding. This is notably useful to access the source files " | |
| 1526 "in compressed transfer syntaxes." + | |
| 1527 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
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4422
diff
changeset
|
1528 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
| 4408 | 1529 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
| 1530 | |
| 1531 if (GzipCompression) | |
| 1532 { | |
| 1533 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
| 1534 } | |
| 1535 else | |
| 1536 { | |
| 1537 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
| 1538 } | |
| 1539 return; | |
| 1540 } | |
| 1541 | |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1542 std::string frameId = call.GetUriComponent("frame", "0"); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1543 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1544 unsigned int frame; |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1545 try |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1546 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1547 frame = boost::lexical_cast<unsigned int>(frameId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1548 } |
|
2836
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fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
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2804
diff
changeset
|
1549 catch (boost::bad_lexical_cast&) |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1550 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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1906
diff
changeset
|
1551 return; |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1552 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1553 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1554 std::string publicId = call.GetUriComponent("id", ""); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
1555 std::string raw; |
|
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
1556 MimeType mime; |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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1906
diff
changeset
|
1557 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1558 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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1906
diff
changeset
|
1559 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1560 locker.GetDicom().GetRawFrame(raw, mime, frame); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1561 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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parents:
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diff
changeset
|
1562 |
|
2408
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New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
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2382
diff
changeset
|
1563 if (GzipCompression) |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1564 { |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1565 GzipCompressor gzip; |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1566 std::string compressed; |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1567 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
1568 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1569 } |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1570 else |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1571 { |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1572 call.GetOutput().AnswerBuffer(raw, mime); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1573 } |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1574 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1575 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1576 |
| 974 | 1577 static void GetResourceStatistics(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1578 { |
| 4418 | 1579 if (call.IsDocumentation()) |
| 1580 { | |
| 1581 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1582 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1583 call.GetDocumentation() | |
| 1584 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1585 .SetSummary("Get " + r + " statistics") | |
| 1586 .SetDescription("Get statistics about the given " + r) | |
| 1587 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1588 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
| 1589 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1590 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1591 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
| 1592 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1593 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1594 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1595 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
| 1596 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
| 1597 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
| 1598 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1599 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1600 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1601 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1602 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1603 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1604 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1605 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
| 1606 | |
| 1607 switch (t) | |
| 1608 { | |
| 1609 // Do NOT add "break" below this point! | |
| 1610 case ResourceType_Patient: | |
| 1611 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
| 1612 "Number of child studies within this " + r); | |
| 1613 | |
| 1614 case ResourceType_Study: | |
| 1615 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
| 1616 "Number of child series within this " + r); | |
| 1617 | |
| 1618 case ResourceType_Series: | |
| 1619 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
| 1620 "Number of child instances within this " + r); | |
| 1621 | |
| 1622 case ResourceType_Instance: | |
| 1623 default: | |
| 1624 break; | |
| 1625 } | |
| 1626 | |
| 1627 return; | |
| 1628 } | |
| 1629 | |
|
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|
1630 static const uint64_t MEGA_BYTES = 1024 * 1024; |
|
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|
1631 |
|
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|
1632 std::string publicId = call.GetUriComponent("id", ""); |
|
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|
1633 |
|
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primitives to collect metrics in Orthanc
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|
1634 ResourceType type; |
|
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|
1635 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
|
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|
1636 unsigned int countStudies, countSeries, countInstances; |
|
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|
1637 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
|
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|
1638 type, diskSize, uncompressedSize, countStudies, countSeries, |
|
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|
1639 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
|
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|
1640 |
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|
1641 Json::Value result = Json::objectValue; |
|
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1642 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1643 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1644 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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|
1645 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
|
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1646 |
|
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1647 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
|
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|
1648 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
|
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|
1649 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
|
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|
1650 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
|
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1651 |
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|
1652 switch (type) |
|
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|
1653 { |
|
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1654 // Do NOT add "break" below this point! |
|
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|
1655 case ResourceType_Patient: |
|
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|
1656 result["CountStudies"] = countStudies; |
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|
1657 |
|
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|
1658 case ResourceType_Study: |
|
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primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1659 result["CountSeries"] = countSeries; |
|
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|
1660 |
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|
1661 case ResourceType_Series: |
|
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|
1662 result["CountInstances"] = countInstances; |
|
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|
1663 |
|
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|
1664 case ResourceType_Instance: |
|
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|
1665 default: |
|
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|
1666 break; |
|
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|
1667 } |
|
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|
1668 |
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|
1669 call.GetOutput().AnswerJson(result); |
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|
1670 } |
|
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|
1671 |
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|
1672 |
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|
1673 |
|
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|
1674 // Handling of metadata ----------------------------------------------------- |
|
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|
1675 |
| 4205 | 1676 static void CheckValidResourceType(const RestApiCall& call) |
|
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|
1677 { |
|
4460
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New metadata automatically computed at the series level: "RemoteAET"
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|
1678 assert(!call.GetFullUri().empty()); |
| 4409 | 1679 const std::string resourceType = call.GetFullUri() [0]; |
|
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|
1680 StringToResourceType(resourceType.c_str()); |
|
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|
1681 } |
|
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|
1682 |
|
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|
1683 |
| 974 | 1684 static void ListMetadata(RestApiGetCall& call) |
|
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|
1685 { |
| 4414 | 1686 if (call.IsDocumentation()) |
| 1687 { | |
| 1688 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1689 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1690 call.GetDocumentation() | |
| 1691 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1692 .SetSummary("List metadata") | |
| 1693 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
| 1694 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1695 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
| 1696 "If present, also retrieve the value of the individual metadata", false) | |
|
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|
1697 .SetHttpGetArgument("numeric", RestApiCallDocumentation::Type_String, |
|
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Added option "?numeric" if listing metadata
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changeset
|
1698 "If present, use the numeric identifier of the metadata instead of its symbolic name", false) |
| 4414 | 1699 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " |
| 1700 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
| 1701 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
| 1702 return; | |
| 1703 } | |
| 1704 | |
|
4460
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New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
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4437
diff
changeset
|
1705 assert(!call.GetFullUri().empty()); |
| 4554 | 1706 const std::string publicId = call.GetUriComponent("id", ""); |
| 1707 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
|
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testing replay of transactions
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|
1708 |
|
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|
1709 typedef std::map<MetadataType, std::string> Metadata; |
|
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|
1710 |
|
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diff
changeset
|
1711 Metadata metadata; |
| 4554 | 1712 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
|
2726
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diff
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|
1713 |
|
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diff
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|
1714 Json::Value result; |
|
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|
1715 |
|
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|
1716 bool isNumeric = call.HasArgument("numeric"); |
|
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|
1717 |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
1718 if (call.HasArgument("expand") && call.GetBooleanArgument("expand", true)) |
|
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|
1719 { |
|
2726
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|
1720 result = Json::objectValue; |
|
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|
1721 |
|
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|
1722 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
|
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|
1723 { |
|
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|
1724 std::string key; |
|
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|
1725 if (isNumeric) |
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|
1726 { |
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|
1727 key = boost::lexical_cast<std::string>(it->first); |
|
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|
1728 } |
|
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|
1729 else |
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|
1730 { |
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|
1731 key = EnumerationToString(it->first); |
|
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|
1732 } |
|
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|
1733 |
|
3187
4bbadcd03966
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|
1734 result[key] = it->second; |
|
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|
1735 } |
|
2726
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|
1736 } |
|
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|
1737 else |
|
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|
1738 { |
|
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|
1739 result = Json::arrayValue; |
|
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|
1740 |
|
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4514
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|
1741 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
|
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|
1742 { |
|
5274
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|
1743 if (isNumeric) |
|
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|
1744 { |
|
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Added option "?numeric" if listing metadata
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|
1745 result.append(it->first); |
|
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|
1746 } |
|
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|
1747 else |
|
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Added option "?numeric" if listing metadata
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changeset
|
1748 { |
|
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changeset
|
1749 result.append(EnumerationToString(it->first)); |
|
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Added option "?numeric" if listing metadata
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|
1750 } |
|
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changeset
|
1751 } |
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1752 } |
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1753 |
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1754 call.GetOutput().AnswerJson(result); |
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1755 } |
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1756 |
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1757 |
| 4657 | 1758 static void SetStringContentETag(const RestApiOutput& output, |
| 1759 int64_t revision, | |
| 1760 const std::string& value) | |
|
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1761 { |
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1762 std::string md5; |
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1763 Toolbox::ComputeMD5(md5, value); |
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1764 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1765 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1766 } |
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1767 |
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1768 |
| 4657 | 1769 static void SetBufferContentETag(const RestApiOutput& output, |
|
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1770 int64_t revision, |
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1771 const void* data, |
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1772 size_t size) |
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1773 { |
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1774 std::string md5; |
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1775 Toolbox::ComputeMD5(md5, data, size); |
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1776 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1777 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1778 } |
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1779 |
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1780 |
| 4657 | 1781 static void SetAttachmentETag(const RestApiOutput& output, |
|
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1782 int64_t revision, |
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1783 const FileInfo& info) |
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1784 { |
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1785 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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1786 info.GetUncompressedMD5() + "\""); |
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1787 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1788 } |
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1789 |
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1790 |
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1791 static std::string GetMD5(const std::string& value) |
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1792 { |
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1793 std::string md5; |
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1794 Toolbox::ComputeMD5(md5, value); |
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1795 return md5; |
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1796 } |
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1797 |
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1798 |
|
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1799 static bool GetRevisionHeader(int64_t& revision /* out */, |
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1800 std::string& md5 /* out */, |
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1801 const RestApiCall& call, |
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1802 const std::string& header) |
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1803 { |
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1804 std::string lower; |
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1805 Toolbox::ToLowerCase(lower, header); |
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1806 |
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1807 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1808 if (found == call.GetHttpHeaders().end()) |
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1809 { |
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1810 return false; |
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1811 } |
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1812 else |
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1813 { |
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1814 std::string value = Toolbox::StripSpaces(found->second); |
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1815 Toolbox::RemoveSurroundingQuotes(value); |
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1816 |
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1817 try |
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1818 { |
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1819 size_t comma = value.find('-'); |
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1820 if (comma != std::string::npos) |
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1821 { |
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1822 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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1823 md5 = value.substr(comma + 1); |
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1824 return true; |
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1825 } |
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1826 } |
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1827 catch (boost::bad_lexical_cast&) |
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1828 { |
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1829 } |
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1830 |
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1831 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1832 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
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1833 } |
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1834 } |
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1835 |
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1836 |
| 974 | 1837 static void GetMetadata(RestApiGetCall& call) |
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1838 { |
| 4414 | 1839 if (call.IsDocumentation()) |
| 1840 { | |
| 1841 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1842 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1843 call.GetDocumentation() | |
| 1844 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1845 .SetSummary("Get metadata") | |
| 1846 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
| 1847 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1848 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1849 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1850 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1851 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4414 | 1852 return; |
| 1853 } | |
| 1854 | |
|
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1855 assert(!call.GetFullUri().empty()); |
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1856 const std::string publicId = call.GetUriComponent("id", ""); |
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1857 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1858 |
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1859 std::string name = call.GetUriComponent("name", ""); |
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1860 MetadataType metadata = StringToMetadata(name); |
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1861 |
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1862 std::string value; |
|
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1863 int64_t revision; |
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1864 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1865 { |
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1866 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
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1867 |
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1868 int64_t userRevision; |
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1869 std::string userMD5; |
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1870 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1871 userRevision == revision && |
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1872 userMD5 == GetMD5(value)) |
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1873 { |
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1874 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1875 } |
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1876 else |
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1877 { |
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1878 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1879 } |
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1880 } |
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1881 } |
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1882 |
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1883 |
| 974 | 1884 static void DeleteMetadata(RestApiDeleteCall& call) |
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1885 { |
| 4414 | 1886 if (call.IsDocumentation()) |
| 1887 { | |
| 1888 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1889 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1890 call.GetDocumentation() | |
| 1891 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1892 .SetSummary("Delete metadata") | |
| 1893 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
| 1894 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
| 1895 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
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1896 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
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1897 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
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1898 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4414 | 1899 return; |
| 1900 } | |
| 1901 | |
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1902 CheckValidResourceType(call); |
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1903 const std::string publicId = call.GetUriComponent("id", ""); |
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1904 |
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1905 std::string name = call.GetUriComponent("name", ""); |
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1906 MetadataType metadata = StringToMetadata(name); |
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1907 |
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1908 if (IsUserMetadata(metadata) || // It is forbidden to delete internal metadata... |
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1909 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
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1910 { |
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1911 bool found; |
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1912 int64_t revision; |
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1913 std::string md5; |
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1914 if (GetRevisionHeader(revision, md5, call, "if-match")) |
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1915 { |
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1916 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
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1917 } |
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1918 else |
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1919 { |
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1920 OrthancConfiguration::ReaderLock lock; |
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1921 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1922 { |
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1923 throw OrthancException(ErrorCode_Revision, |
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1924 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
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1925 } |
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1926 else |
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1927 { |
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1928 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
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1929 } |
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1930 } |
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1931 |
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1932 if (found) |
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1933 { |
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1934 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1935 } |
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1936 else |
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1937 { |
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1938 throw OrthancException(ErrorCode_UnknownResource); |
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1939 } |
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1940 } |
|
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1941 else |
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1942 { |
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1943 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1944 } |
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1945 } |
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1946 |
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1947 |
| 974 | 1948 static void SetMetadata(RestApiPutCall& call) |
|
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1949 { |
| 4414 | 1950 if (call.IsDocumentation()) |
| 1951 { | |
| 1952 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1953 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1954 call.GetDocumentation() | |
| 1955 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1956 .SetSummary("Set metadata") | |
| 1957 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
| 1958 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
| 1959 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1960 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
|
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1961 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
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1962 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
| 4414 | 1963 return; |
| 1964 } | |
| 1965 | |
|
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1966 CheckValidResourceType(call); |
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|
1967 |
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1968 std::string publicId = call.GetUriComponent("id", ""); |
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1969 std::string name = call.GetUriComponent("name", ""); |
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1970 MetadataType metadata = StringToMetadata(name); |
|
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|
1971 |
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1972 std::string value; |
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|
1973 call.BodyToString(value); |
|
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|
1974 |
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1975 if (IsUserMetadata(metadata) || // It is forbidden to modify internal metadata... |
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1976 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
|
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1977 { |
|
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1978 int64_t oldRevision; |
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1979 std::string oldMD5; |
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1980 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
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1981 |
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1982 if (!hasOldRevision) |
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1983 { |
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1984 OrthancConfiguration::ReaderLock lock; |
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1985 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1986 { |
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1987 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
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1988 // the actual value of "oldRevision" if the metadata is |
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1989 // inexistent as expected |
|
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1990 hasOldRevision = true; |
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1991 oldRevision = -1; // dummy value |
|
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1992 oldMD5.clear(); // dummy value |
|
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1993 } |
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1994 } |
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|
1995 |
|
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|
1996 int64_t newRevision; |
|
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1997 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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parents:
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diff
changeset
|
1998 hasOldRevision, oldRevision, oldMD5); |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1999 |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2000 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2001 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2002 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2003 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2004 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2005 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2006 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2007 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2008 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2009 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2010 |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2011 // Handling of labels ------------------------------------------------------- |
|
d0f7c742d397
started implementation of labels
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diff
changeset
|
2012 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2013 static void ListLabels(RestApiGetCall& call) |
|
d0f7c742d397
started implementation of labels
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parents:
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diff
changeset
|
2014 { |
|
d0f7c742d397
started implementation of labels
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parents:
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diff
changeset
|
2015 if (call.IsDocumentation()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2016 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2017 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2018 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2019 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2020 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
5275
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
2021 .SetSummary("List labels") |
|
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
2022 .SetDescription("Get the labels that are associated with the given " + r + " (new in Orthanc 1.12.0)") |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2023 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2024 .AddAnswerType(MimeType_Json, "JSON array containing the names of the labels") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2025 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/labels", true); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2026 return; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2027 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2028 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2029 assert(!call.GetFullUri().empty()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2030 const std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2031 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2032 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2033 std::set<std::string> labels; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2034 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2035 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2036 Json::Value result = Json::arrayValue; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2037 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2038 for (std::set<std::string>::const_iterator it = labels.begin(); it != labels.end(); ++it) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2039 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2040 result.append(*it); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2041 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2042 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2043 call.GetOutput().AnswerJson(result); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2044 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2045 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2046 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2047 static void GetLabel(RestApiGetCall& call) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2048 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2049 if (call.IsDocumentation()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2050 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2051 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2052 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2053 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2054 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2055 .SetSummary("Test label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2056 .SetDescription("Test whether the " + r + " is associated with the given label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2057 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2058 .SetUriArgument("label", "The label of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2059 .AddAnswerType(MimeType_PlainText, "Empty string is returned in the case of presence, error 404 in the case of absence"); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2060 return; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2061 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2062 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2063 CheckValidResourceType(call); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2064 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2065 assert(!call.GetFullUri().empty()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2066 const std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2067 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2068 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2069 std::string label = call.GetUriComponent("label", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2070 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2071 std::set<std::string> labels; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2072 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2073 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2074 if (labels.find(label) != labels.end()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2075 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2076 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2077 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2078 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2079 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2080 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2081 static void AddLabel(RestApiPutCall& call) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2082 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2083 if (call.IsDocumentation()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2084 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2085 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2086 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2087 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2088 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2089 .SetSummary("Add label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2090 .SetDescription("Associate a label with a " + r) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2091 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2092 .SetUriArgument("label", "The label to be added"); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2093 return; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2094 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2095 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2096 CheckValidResourceType(call); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2097 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2098 std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2099 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2100 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2101 std::string label = call.GetUriComponent("label", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2102 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Add); |
|
d0f7c742d397
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diff
changeset
|
2103 |
|
d0f7c742d397
started implementation of labels
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diff
changeset
|
2104 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2105 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2106 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2107 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2108 static void RemoveLabel(RestApiDeleteCall& call) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2109 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2110 if (call.IsDocumentation()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2111 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2112 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2113 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2114 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2115 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2116 .SetSummary("Remove label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2117 .SetDescription("Remove a label associated with a " + r) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2118 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2119 .SetUriArgument("label", "The label to be removed"); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2120 return; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2121 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2122 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2123 CheckValidResourceType(call); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2124 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2125 std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2126 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2127 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2128 std::string label = call.GetUriComponent("label", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2129 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Remove); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2130 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2131 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2132 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2133 |
|
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2134 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2135 // Handling of attached files ----------------------------------------------- |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2136 |
| 974 | 2137 static void ListAttachments(RestApiGetCall& call) |
|
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2138 { |
| 4409 | 2139 if (call.IsDocumentation()) |
| 2140 { | |
| 2141 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2142 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2143 call.GetDocumentation() | |
| 2144 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2145 .SetSummary("List attachments") | |
| 2146 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
| 2147 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
4853
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2148 .SetHttpGetArgument("full", RestApiCallDocumentation::Type_String, |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2149 "If present, retrieve the attachments list and their numerical ids", false) |
| 4409 | 2150 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") |
| 2151 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
| 2152 return; | |
| 2153 } | |
| 2154 | |
| 2155 const std::string resourceType = call.GetFullUri() [0]; | |
| 2156 const std::string publicId = call.GetUriComponent("id", ""); | |
|
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
2157 std::set<FileContentType> attachments; |
|
751
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2158 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2159 |
|
4853
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2160 Json::Value result; |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2161 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2162 if (call.HasArgument("full")) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2163 { |
|
4853
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2164 result = Json::objectValue; |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2165 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2166 for (std::set<FileContentType>::const_iterator |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2167 it = attachments.begin(); it != attachments.end(); ++it) |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2168 { |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2169 std::string key = EnumerationToString(*it); |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2170 result[key] = static_cast<uint16_t>(*it); |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2171 } |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2172 } |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2173 else |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2174 { |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2175 result = Json::arrayValue; |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2176 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2177 for (std::set<FileContentType>::const_iterator |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2178 it = attachments.begin(); it != attachments.end(); ++it) |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2179 { |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2180 result.append(EnumerationToString(*it)); |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2181 } |
|
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2182 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2183 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2184 call.GetOutput().AnswerJson(result); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2185 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2186 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2187 |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2188 static void AddAttachmentDocumentation(RestApiGetCall& call, |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2189 const std::string& resourceType) |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2190 { |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2191 call.GetDocumentation() |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2192 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2193 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2194 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2195 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2196 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2197 |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
2198 |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2199 static bool GetAttachmentInfo(FileInfo& info, |
|
f7d5372b59b3
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changeset
|
2200 RestApiGetCall& call) |
|
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changeset
|
2201 { |
|
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changeset
|
2202 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
2203 |
|
4627
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4623
diff
changeset
|
2204 const std::string publicId = call.GetUriComponent("id", ""); |
|
f7d5372b59b3
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diff
changeset
|
2205 const std::string name = call.GetUriComponent("name", ""); |
|
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diff
changeset
|
2206 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
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diff
changeset
|
2207 |
|
4627
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handling revisions of attachments
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diff
changeset
|
2208 int64_t revision; |
|
f7d5372b59b3
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4623
diff
changeset
|
2209 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2210 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2211 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
|
4627
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
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2212 |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2213 int64_t userRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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parents:
4627
diff
changeset
|
2214 std::string userMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2215 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2216 revision == userRevision && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2217 info.GetUncompressedMD5() == userMD5) |
|
4627
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2218 { |
|
f7d5372b59b3
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diff
changeset
|
2219 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
2220 return false; |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
2221 } |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
2222 else |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2223 { |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2224 return true; |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2225 } |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
2226 } |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
2227 else |
|
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handling revisions of attachments
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diff
changeset
|
2228 { |
|
f7d5372b59b3
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4623
diff
changeset
|
2229 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2230 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2231 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2232 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2233 |
| 974 | 2234 static void GetAttachmentOperations(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2235 { |
| 4409 | 2236 if (call.IsDocumentation()) |
| 2237 { | |
| 2238 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2239 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2240 AddAttachmentDocumentation(call, r); |
| 4409 | 2241 call.GetDocumentation() |
| 2242 .SetTag("Other") | |
| 4414 | 2243 .SetSummary("List operations on attachments") |
| 2244 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
| 4409 | 2245 .AddAnswerType(MimeType_Json, "List of the available operations") |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
2246 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/6582b1c0-292ad5ab-ba0f088f-f7a1766f-9a29a54f/attachments/dicom", true); |
| 4409 | 2247 return; |
| 2248 } | |
| 2249 | |
|
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parents:
diff
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|
2250 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2251 if (GetAttachmentInfo(info, call)) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2252 { |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2253 Json::Value operations = Json::arrayValue; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2254 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2255 operations.append("compress"); |
|
751
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diff
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|
2256 operations.append("compressed-data"); |
|
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diff
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|
2257 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2258 if (info.GetCompressedMD5() != "") |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2259 { |
|
5197fd35333c
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diff
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|
2260 operations.append("compressed-md5"); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2261 } |
|
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diff
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|
2262 |
|
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|
2263 operations.append("compressed-size"); |
|
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diff
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|
2264 operations.append("data"); |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2265 operations.append("info"); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
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|
2266 operations.append("is-compressed"); |
|
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|
2267 |
|
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|
2268 if (info.GetUncompressedMD5() != "") |
|
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|
2269 { |
|
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diff
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|
2270 operations.append("md5"); |
|
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|
2271 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2272 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2273 operations.append("size"); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
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|
2274 operations.append("uncompress"); |
|
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|
2275 |
|
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parents:
diff
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|
2276 if (info.GetCompressedMD5() != "" && |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2277 info.GetUncompressedMD5() != "") |
|
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|
2278 { |
|
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|
2279 operations.append("verify-md5"); |
|
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|
2280 } |
|
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|
2281 |
|
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diff
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|
2282 call.GetOutput().AnswerJson(operations); |
|
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|
2283 } |
|
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|
2284 } |
|
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diff
changeset
|
2285 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2286 |
|
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|
2287 template <int uncompress> |
| 974 | 2288 static void GetAttachmentData(RestApiGetCall& call) |
|
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diff
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|
2289 { |
| 4409 | 2290 if (call.IsDocumentation()) |
| 2291 { | |
| 2292 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2293 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2294 call.GetDocumentation() | |
| 2295 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2296 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
| 2297 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
| 4418 | 2298 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
| 4409 | 2299 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 2300 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
4627
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2301 .AddAnswerType(MimeType_Binary, "The attachment") |
|
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4623
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|
2302 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
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4623
diff
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|
2303 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4409 | 2304 return; |
| 2305 } | |
| 2306 | |
|
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|
2307 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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|
2308 |
|
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|
2309 CheckValidResourceType(call); |
|
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|
2310 |
|
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|
2311 std::string publicId = call.GetUriComponent("id", ""); |
|
1146
200fcac0deb4
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Sebastien Jodogne <s.jodogne@gmail.com>
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1145
diff
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|
2312 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
|
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|
2313 |
|
4640
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2314 FileInfo info; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2315 if (GetAttachmentInfo(info, call)) |
|
1146
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optimization for access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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1145
diff
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|
2316 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2317 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
|
66109d24d26e
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diff
changeset
|
2318 |
|
66109d24d26e
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4627
diff
changeset
|
2319 if (uncompress) |
|
4627
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4623
diff
changeset
|
2320 { |
|
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4623
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|
2321 context.AnswerAttachment(call.GetOutput(), publicId, type); |
|
f7d5372b59b3
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|
2322 } |
|
f7d5372b59b3
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|
2323 else |
|
f7d5372b59b3
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4623
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changeset
|
2324 { |
|
4640
66109d24d26e
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diff
changeset
|
2325 // Return the raw data (possibly compressed), as stored on the filesystem |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
2326 std::string content; |
| 5427 | 2327 std::string attachmentId; |
|
4640
66109d24d26e
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4627
diff
changeset
|
2328 int64_t revision; |
| 5427 | 2329 context.ReadAttachment(content, revision, attachmentId, publicId, type, false, true /* skipCache when you absolutely need the compressed data */); |
|
4640
66109d24d26e
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|
2330 |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2331 int64_t userRevision; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
2332 std::string userMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
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|
2333 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
2334 revision == userRevision && |
|
66109d24d26e
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4627
diff
changeset
|
2335 info.GetUncompressedMD5() == userMD5) |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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changeset
|
2336 { |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
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changeset
|
2337 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
66109d24d26e
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|
2338 } |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
2339 else |
|
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
2340 { |
|
66109d24d26e
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diff
changeset
|
2341 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
|
66109d24d26e
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|
2342 } |
|
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|
2343 } |
|
1146
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|
2344 } |
|
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|
2345 } |
|
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|
2346 |
|
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|
2347 |
| 974 | 2348 static void GetAttachmentSize(RestApiGetCall& call) |
|
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|
2349 { |
| 4409 | 2350 if (call.IsDocumentation()) |
| 2351 { | |
| 2352 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2353 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
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4623
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changeset
|
2354 AddAttachmentDocumentation(call, r); |
| 4409 | 2355 call.GetDocumentation() |
| 2356 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2357 .SetSummary("Get size of attachment") | |
| 2358 .SetDescription("Get the size of one attachment associated with the given " + r) | |
| 2359 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
| 2360 return; | |
| 2361 } | |
| 2362 | |
|
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|
2363 FileInfo info; |
|
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|
2364 if (GetAttachmentInfo(info, call)) |
|
5197fd35333c
refactoring of OrthancRestApi
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diff
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|
2365 { |
|
2908
9d277f8ad698
new enumeration: MimeType
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2905
diff
changeset
|
2366 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
|
751
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|
2367 } |
|
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|
2368 } |
|
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changeset
|
2369 |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2370 static void GetAttachmentInfo(RestApiGetCall& call) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2371 { |
|
504624b0a062
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2372 if (call.IsDocumentation()) |
|
504624b0a062
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Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2373 { |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2374 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2375 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2376 AddAttachmentDocumentation(call, r); |
|
504624b0a062
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Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2377 call.GetDocumentation() |
|
504624b0a062
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Alain Mazy <am@osimis.io>
parents:
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diff
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|
2378 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
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diff
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|
2379 .SetSummary("Get info about the attachment") |
|
504624b0a062
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Alain Mazy <am@osimis.io>
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diff
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|
2380 .SetDescription("Get all the information about the attachment associated with the given " + r) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
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diff
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|
2381 .AddAnswerType(MimeType_Json, "JSON object containing the information about the attachment") |
|
5432
59e3b6f8c5be
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2382 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/attachments/dicom/info", true); |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2383 return; |
|
504624b0a062
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Alain Mazy <am@osimis.io>
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diff
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|
2384 } |
|
504624b0a062
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Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2385 |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2386 FileInfo info; |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2387 if (GetAttachmentInfo(info, call)) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2388 { |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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parents:
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diff
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|
2389 Json::Value result = Json::objectValue; |
|
504624b0a062
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diff
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|
2390 result["Uuid"] = info.GetUuid(); |
|
504624b0a062
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|
2391 result["ContentType"] = info.GetContentType(); |
|
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Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2392 result["UncompressedSize"] = Json::Value::UInt64(info.GetUncompressedSize()); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
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|
2393 result["CompressedSize"] = Json::Value::UInt64(info.GetCompressedSize()); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
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|
2394 result["UncompressedMD5"] = info.GetUncompressedMD5(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2395 result["CompressedMD5"] = info.GetCompressedMD5(); |
|
504624b0a062
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parents:
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diff
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|
2396 |
|
504624b0a062
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Alain Mazy <am@osimis.io>
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|
2397 call.GetOutput().AnswerJson(result); |
|
504624b0a062
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Alain Mazy <am@osimis.io>
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|
2398 } |
|
504624b0a062
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|
2399 } |
|
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|
2400 |
| 974 | 2401 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
|
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|
2402 { |
| 4409 | 2403 if (call.IsDocumentation()) |
| 2404 { | |
| 2405 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2406 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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|
2407 AddAttachmentDocumentation(call, r); |
| 4409 | 2408 call.GetDocumentation() |
| 2409 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 4410 | 2410 .SetSummary("Get size of attachment on disk") |
| 4409 | 2411 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
| 4413 | 2412 "This is different from `.../size` iff `EnableStorage` is `true`.") |
| 4410 | 2413 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
| 4409 | 2414 return; |
| 2415 } | |
| 2416 | |
|
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|
2417 FileInfo info; |
|
5197fd35333c
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|
2418 if (GetAttachmentInfo(info, call)) |
|
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|
2419 { |
|
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|
2420 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
|
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|
2421 } |
|
5197fd35333c
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|
2422 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2423 |
|
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|
2424 |
| 974 | 2425 static void GetAttachmentMD5(RestApiGetCall& call) |
|
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|
2426 { |
| 4410 | 2427 if (call.IsDocumentation()) |
| 2428 { | |
| 2429 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2430 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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|
2431 AddAttachmentDocumentation(call, r); |
| 4410 | 2432 call.GetDocumentation() |
| 2433 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2434 .SetSummary("Get MD5 of attachment") | |
| 2435 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
| 2436 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
| 2437 return; | |
| 2438 } | |
| 2439 | |
|
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|
2440 FileInfo info; |
|
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|
2441 if (GetAttachmentInfo(info, call) && |
|
5197fd35333c
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parents:
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|
2442 info.GetUncompressedMD5() != "") |
|
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refactoring of OrthancRestApi
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diff
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|
2443 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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2905
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changeset
|
2444 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
|
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|
2445 } |
|
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diff
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|
2446 } |
|
5197fd35333c
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|
2447 |
|
5197fd35333c
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diff
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|
2448 |
| 974 | 2449 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
|
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|
2450 { |
| 4410 | 2451 if (call.IsDocumentation()) |
| 2452 { | |
| 2453 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2454 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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|
2455 AddAttachmentDocumentation(call, r); |
| 4410 | 2456 call.GetDocumentation() |
| 2457 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2458 .SetSummary("Get MD5 of attachment on disk") | |
| 2459 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
| 4413 | 2460 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
| 4410 | 2461 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
| 2462 return; | |
| 2463 } | |
| 2464 | |
|
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|
2465 FileInfo info; |
|
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|
2466 if (GetAttachmentInfo(info, call) && |
|
5197fd35333c
refactoring of OrthancRestApi
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|
2467 info.GetCompressedMD5() != "") |
|
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refactoring of OrthancRestApi
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|
2468 { |
|
2908
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|
2469 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
|
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|
2470 } |
|
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|
2471 } |
|
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|
2472 |
|
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diff
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|
2473 |
| 974 | 2474 static void VerifyAttachment(RestApiPostCall& call) |
|
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|
2475 { |
| 4410 | 2476 if (call.IsDocumentation()) |
| 2477 { | |
| 2478 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2479 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2480 call.GetDocumentation() | |
| 2481 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2482 .SetSummary("Verify attachment") | |
| 2483 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
| 2484 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2485 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 2486 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
| 2487 return; | |
| 2488 } | |
| 2489 | |
|
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|
2490 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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|
2491 CheckValidResourceType(call); |
|
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|
2492 |
|
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diff
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|
2493 std::string publicId = call.GetUriComponent("id", ""); |
|
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refactoring of OrthancRestApi
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diff
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|
2494 std::string name = call.GetUriComponent("name", ""); |
|
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|
2495 FileContentType contentType = StringToContentType(name); |
|
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|
2496 |
|
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|
2497 FileInfo info; |
|
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4623
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|
2498 int64_t revision; // Ignored |
|
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handling revisions of attachments
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4623
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|
2499 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
|
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|
2500 info.GetCompressedMD5() == "" || |
|
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|
2501 info.GetUncompressedMD5() == "") |
|
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|
2502 { |
|
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|
2503 // Inexistent resource, or no MD5 available |
|
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|
2504 return; |
|
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|
2505 } |
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|
2506 |
|
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|
2507 bool ok = false; |
|
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|
2508 |
|
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|
2509 // First check whether the compressed data is correctly stored in the disk |
|
5197fd35333c
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|
2510 std::string data; |
| 5427 | 2511 std::string attachmentId; |
| 2512 | |
| 2513 context.ReadAttachment(data, revision, attachmentId, publicId, StringToContentType(name), false, true /* skipCache when you absolutely need the compressed data */); | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2514 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2515 std::string actualMD5; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2516 Toolbox::ComputeMD5(actualMD5, data); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2517 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2518 if (actualMD5 == info.GetCompressedMD5()) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2519 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2520 // The compressed data is OK. If a compression algorithm was |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2521 // applied to it, now check the MD5 of the uncompressed data. |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2522 if (info.GetCompressionType() == CompressionType_None) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2523 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2524 ok = true; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2525 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2526 else |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2527 { |
| 5427 | 2528 context.ReadAttachment(data, revision, attachmentId, publicId, StringToContentType(name), true, true /* skipCache when you absolutely need the compressed data */); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2529 Toolbox::ComputeMD5(actualMD5, data); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2530 ok = (actualMD5 == info.GetUncompressedMD5()); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2531 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2532 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2533 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2534 if (ok) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2535 { |
|
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2536 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2537 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2538 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2539 else |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2540 { |
|
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2541 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2542 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2543 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2544 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2545 |
| 974 | 2546 static void UploadAttachment(RestApiPutCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2547 { |
| 4414 | 2548 if (call.IsDocumentation()) |
| 2549 { | |
| 2550 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2551 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2552 call.GetDocumentation() | |
| 2553 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2554 .SetSummary("Set attachment") | |
| 2555 .SetDescription("Attach a file to the given DICOM " + r + | |
| 2556 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
| 2557 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 2558 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
| 2559 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2560 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2561 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
| 4414 | 2562 return; |
| 2563 } | |
| 2564 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2565 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2566 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2567 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2568 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2569 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2570 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2571 FileContentType contentType = StringToContentType(name); |
|
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2572 if (IsUserContentType(contentType) || // It is forbidden to modify internal attachments... |
|
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2573 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2574 { |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2575 int64_t oldRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2576 std::string oldMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2577 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2578 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2579 if (!hasOldRevision) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2580 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2581 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2582 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2583 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2584 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2585 // the actual value of "oldRevision" if the metadata is |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2586 // inexistent as expected |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2587 hasOldRevision = true; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2588 oldRevision = -1; // dummy value |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2589 oldMD5.clear(); // dummy value |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2590 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2591 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2592 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2593 int64_t newRevision; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2594 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2595 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2596 |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2597 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2598 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2599 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2600 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2601 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2602 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2603 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2604 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2605 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2606 |
| 974 | 2607 static void DeleteAttachment(RestApiDeleteCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2608 { |
| 4413 | 2609 if (call.IsDocumentation()) |
| 2610 { | |
| 2611 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2612 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2613 call.GetDocumentation() | |
| 2614 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2615 .SetSummary("Delete attachment") | |
| 4414 | 2616 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
| 2617 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
| 4413 | 2618 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2619 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2620 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2621 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4413 | 2622 return; |
| 2623 } | |
| 2624 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2625 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2626 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2627 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2628 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2629 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2630 |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2631 bool allowed; |
|
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2632 if (IsUserContentType(contentType) || // It is forbidden to delete internal attachments... |
|
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2633 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2634 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2635 allowed = true; |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2636 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2637 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2638 { |
|
2940
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2639 OrthancConfiguration::ReaderLock lock; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2640 |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2641 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2642 contentType == FileContentType_DicomAsJson) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2643 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2644 allowed = true; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2645 } |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2646 else |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2647 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2648 // It is forbidden to delete internal attachments, except for |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2649 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2650 // would be automatically reconstructed on the next GET call) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2651 allowed = false; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2652 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2653 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2654 |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2655 if (allowed) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2656 { |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2657 bool found; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2658 int64_t revision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2659 std::string md5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2660 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2661 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2662 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2663 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2664 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2665 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2666 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2667 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2668 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2669 throw OrthancException(ErrorCode_Revision, |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2670 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2671 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2672 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2673 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2674 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2675 false, -1 /* dummy value */, "" /* dummy value */); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2676 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2677 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2678 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2679 if (found) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2680 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2681 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2682 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2683 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2684 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2685 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2686 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2687 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2688 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2689 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2690 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2691 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2692 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2693 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2694 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2695 template <enum CompressionType compression> |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2696 static void ChangeAttachmentCompression(RestApiPostCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2697 { |
| 4413 | 2698 if (call.IsDocumentation()) |
| 2699 { | |
| 2700 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2701 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2702 call.GetDocumentation() | |
| 2703 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2704 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
| 2705 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
| 2706 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2707 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
| 4413 | 2708 return; |
| 2709 } | |
| 2710 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2711 CheckValidResourceType(call); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2712 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2713 std::string publicId = call.GetUriComponent("id", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2714 std::string name = call.GetUriComponent("name", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2715 FileContentType contentType = StringToContentType(name); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2716 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2717 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2718 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2719 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2720 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2721 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2722 static void IsAttachmentCompressed(RestApiGetCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2723 { |
| 4413 | 2724 if (call.IsDocumentation()) |
| 2725 { | |
| 2726 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2727 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2728 AddAttachmentDocumentation(call, r); |
| 4413 | 2729 call.GetDocumentation() |
| 2730 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2731 .SetSummary("Is attachment compressed?") | |
| 2732 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
| 2733 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
| 2734 return; | |
| 2735 } | |
| 2736 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2737 FileInfo info; |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2738 if (GetAttachmentInfo(info, call)) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2739 { |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2740 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2741 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2742 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2743 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2744 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2745 |
| 782 | 2746 // Raw access to the DICOM tags of an instance ------------------------------ |
| 2747 | |
| 974 | 2748 static void GetRawContent(RestApiGetCall& call) |
| 782 | 2749 { |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2750 if (call.IsDocumentation()) |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2751 { |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2752 call.GetDocumentation() |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2753 .SetTag("Instances") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2754 .SetSummary("Get raw tag") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2755 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2756 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
5393
c5c00bee291a
in openapi generator: renamed '...' into 'path' since '...' is an invalid name
Alain Mazy <am@osimis.io>
parents:
5392
diff
changeset
|
2757 .SetUriArgument("path", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2758 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2759 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2760 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2761 "or JSON array containing the list of available tags if accessing a dataset"); |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2762 return; |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2763 } |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2764 |
| 782 | 2765 std::string id = call.GetUriComponent("id", ""); |
| 2766 | |
| 2767 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
| 2768 | |
| 2769 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
| 2770 } | |
| 2771 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2772 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2773 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2774 static bool ExtractSharedTags(Json::Value& shared, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2775 ServerContext& context, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2776 const std::string& publicId) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2777 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2778 // Retrieve all the instances of this patient/study/series |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2779 typedef std::list<std::string> Instances; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2780 Instances instances; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2781 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2782 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2783 // Loop over the instances |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2784 bool isFirst = true; |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2785 shared = Json::objectValue; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2786 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2787 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2788 it != instances.end(); ++it) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2789 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2790 // Get the tags of the current instance, in the simplified format |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2791 Json::Value tags; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2792 |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2793 try |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2794 { |
| 2124 | 2795 context.ReadDicomAsJson(tags, *it); |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2796 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2797 catch (OrthancException&) |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2798 { |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2799 // Race condition: This instance has been removed since |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2800 // (*). Ignore this instance. |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2801 continue; |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2802 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2803 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2804 if (tags.type() != Json::objectValue) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2805 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2806 return false; // Error |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2807 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2808 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2809 // Only keep the tags that are mapped to a string |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2810 Json::Value::Members members = tags.getMemberNames(); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2811 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2812 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2813 const Json::Value& tag = tags[members[i]]; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
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|
2814 if (tag.type() != Json::objectValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2815 tag["Type"].type() != Json::stringValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2816 tag["Type"].asString() != "String") |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2817 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2818 tags.removeMember(members[i]); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2819 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2820 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2821 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2822 if (isFirst) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2823 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2824 // This is the first instance, keep its tags as such |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2825 shared = tags; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2826 isFirst = false; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2827 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2828 else |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2829 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2830 // Loop over all the members of the shared tags extracted so |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2831 // far. If the value of one of these tags does not match its |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2832 // value in the current instance, remove it. |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2833 members = shared.getMemberNames(); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2834 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2835 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2836 if (!tags.isMember(members[i]) || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2837 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2838 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2839 shared.removeMember(members[i]); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2840 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2841 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2842 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2843 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2844 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2845 return true; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2846 } |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2847 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2848 |
| 974 | 2849 static void GetSharedTags(RestApiGetCall& call) |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2850 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2851 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2852 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2853 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2854 |
|
4416
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2855 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2856 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
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parents:
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diff
changeset
|
2857 call.GetDocumentation() |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2858 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
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parents:
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diff
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|
2859 .SetSummary("Get shared tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2860 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
|
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diff
changeset
|
2861 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
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changeset
|
2862 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2863 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2864 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2865 return; |
|
0b27841950d5
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|
2866 } |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2867 |
|
960
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2868 ServerContext& context = OrthancRestApi::GetContext(call); |
|
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2869 std::string publicId = call.GetUriComponent("id", ""); |
|
abac5c83134f
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diff
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|
2870 |
|
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2871 Json::Value sharedTags; |
|
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2872 if (ExtractSharedTags(sharedTags, context, publicId)) |
|
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2873 { |
|
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2874 // Success: Send the value of the shared tags |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2875 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
960
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2876 } |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2877 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2878 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2879 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2880 template <enum ResourceType resourceType, |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2881 enum DicomModule module> |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2882 static void GetModule(RestApiGetCall& call) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2883 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2884 if (call.IsDocumentation()) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2885 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2886 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2887 std::string m; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2888 switch (module) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2889 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2890 case DicomModule_Patient: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2891 m = "patient"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2892 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2893 case DicomModule_Study: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2894 m = "study"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2895 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2896 case DicomModule_Series: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2897 m = "series"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2898 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2899 case DicomModule_Instance: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2900 m = "instance"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2901 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2902 default: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2903 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2904 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2905 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2906 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2907 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2908 call.GetDocumentation() |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2909 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2910 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2911 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2912 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2913 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2914 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2915 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2916 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2917 return; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2918 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2919 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2920 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2921 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2922 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2923 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2924 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2925 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
|
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2926 { |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2927 throw OrthancException(ErrorCode_NotImplemented); |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2928 } |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2929 |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2930 ServerContext& context = OrthancRestApi::GetContext(call); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2931 std::string publicId = call.GetUriComponent("id", ""); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2932 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2933 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2934 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2935 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2936 typedef std::set<DicomTag> ModuleTags; |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2937 ModuleTags moduleTags; |
| 1368 | 2938 DicomTag::AddTagsForModule(moduleTags, module); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2939 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2940 Json::Value tags; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2941 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2942 if (resourceType != ResourceType_Instance) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2943 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2944 // Retrieve all the instances of this patient/study/series |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2945 typedef std::list<std::string> Instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2946 Instances instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2947 context.GetIndex().GetChildInstances(instances, publicId); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2948 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2949 if (instances.empty()) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2950 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2951 return; // Error: No instance (should never happen) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2952 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2953 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2954 // Select one child instance |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2955 publicId = instances.front(); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2956 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2957 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2958 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2959 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2960 // Filter the tags of the instance according to the module |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2961 Json::Value result = Json::objectValue; |
| 1303 | 2962 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2963 { |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2964 std::string s = tag->Format(); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2965 if (tags.isMember(s)) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2966 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2967 result[s] = tags[s]; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2968 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2969 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2970 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2971 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2972 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2973 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2974 |
| 1722 | 2975 namespace |
| 2976 { | |
| 2977 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
| 2978 } | |
| 2979 | |
| 2980 | |
| 2981 static void AccumulateLookupResults(LookupResults& result, | |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2982 ServerIndex& index, |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2983 const DicomTag& tag, |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2984 const std::string& value, |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2985 ResourceType level) |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2986 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2987 std::vector<std::string> tmp; |
|
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
2988 index.LookupIdentifierExact(tmp, level, tag, value); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2989 |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2990 for (size_t i = 0; i < tmp.size(); i++) |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2991 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2992 result.push_back(std::make_pair(level, tmp[i])); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2993 } |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2994 } |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2995 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2996 |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2997 static void Lookup(RestApiPostCall& call) |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2998 { |
| 4422 | 2999 if (call.IsDocumentation()) |
| 3000 { | |
| 3001 call.GetDocumentation() | |
| 3002 .SetTag("System") | |
| 3003 .SetSummary("Look for DICOM identifiers") | |
| 3004 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
| 3005 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
| 3006 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
| 3007 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
| 3008 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
| 3009 "DICOM resource that is stored by Orthanc"); | |
| 3010 return; | |
| 3011 } | |
| 3012 | |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
3013 std::string tag; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
3014 call.BodyToString(tag); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3015 |
| 1722 | 3016 LookupResults resources; |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3017 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3018 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3019 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3020 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3021 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3022 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3023 Json::Value result = Json::arrayValue; |
| 1722 | 3024 for (LookupResults::const_iterator |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3025 it = resources.begin(); it != resources.end(); ++it) |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3026 { |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3027 ResourceType type = it->first; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3028 const std::string& id = it->second; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3029 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3030 Json::Value item = Json::objectValue; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3031 item["Type"] = EnumerationToString(type); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3032 item["ID"] = id; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3033 item["Path"] = GetBasePath(type, id); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3034 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3035 result.append(item); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3036 } |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3037 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3038 call.GetOutput().AnswerJson(result); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3039 } |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3040 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3041 |
| 1354 | 3042 static void Find(RestApiPostCall& call) |
| 3043 { | |
| 2998 | 3044 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
| 3045 static const char* const KEY_EXPAND = "Expand"; | |
| 3046 static const char* const KEY_LEVEL = "Level"; | |
| 3047 static const char* const KEY_LIMIT = "Limit"; | |
| 3048 static const char* const KEY_QUERY = "Query"; | |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3049 static const char* const KEY_REQUESTED_TAGS = "RequestedTags"; |
| 2998 | 3050 static const char* const KEY_SINCE = "Since"; |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3051 static const char* const KEY_LABELS = "Labels"; // New in Orthanc 1.12.0 |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3052 static const char* const KEY_LABELS_CONSTRAINT = "LabelsConstraint"; // New in Orthanc 1.12.0 |
|
5825
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3053 static const char* const KEY_ORDER_BY = "OrderBy"; // New in Orthanc 1.12.5 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3054 static const char* const KEY_ORDER_BY_KEY = "Key"; // New in Orthanc 1.12.5 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3055 static const char* const KEY_ORDER_BY_TYPE = "Type"; // New in Orthanc 1.12.5 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3056 static const char* const KEY_ORDER_BY_DIRECTION = "Direction"; // New in Orthanc 1.12.5 |
|
5826
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3057 static const char* const KEY_PARENT_PATIENT = "ParentPatient"; // New in Orthanc 1.12.5 |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3058 static const char* const KEY_PARENT_STUDY = "ParentStudy"; // New in Orthanc 1.12.5 |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3059 static const char* const KEY_PARENT_SERIES = "ParentSeries"; // New in Orthanc 1.12.5 |
| 5828 | 3060 static const char* const KEY_QUERY_METADATA = "QueryMetadata"; // New in Orthanc 1.12.5 |
| 5829 | 3061 static const char* const KEY_RESPONSE_CONTENT = "ResponseContent"; // New in Orthanc 1.12.5 |
| 2998 | 3062 |
| 4421 | 3063 if (call.IsDocumentation()) |
| 3064 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3065 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3066 |
| 4421 | 3067 call.GetDocumentation() |
| 3068 .SetTag("System") | |
| 3069 .SetSummary("Look for local resources") | |
| 3070 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
| 3071 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3072 "https://orthanc.uclouvain.be/book/users/rest.html#performing-finds-within-orthanc") |
| 4421 | 3073 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, |
| 3074 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
| 3075 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
| 3076 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
| 3077 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
| 3078 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
| 3079 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
| 3080 "Limit the number of reported resources", false) | |
| 3081 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
| 3082 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3083 .SetRequestField(KEY_REQUESTED_TAGS, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3084 "A list of DICOM tags to include in the response (applicable only if \"Expand\" is set to true). " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3085 "The tags requested tags are returned in the 'RequestedTags' field in the response. " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3086 "Note that, if you are requesting tags that are not listed in the Main Dicom Tags stored in DB, building the response " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3087 "might be slow since Orthanc will need to access the DICOM files. If not specified, Orthanc will return " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3088 "all Main Dicom Tags to keep backward compatibility with Orthanc prior to 1.11.0.", false) |
| 4421 | 3089 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, |
| 3090 "Associative array containing the filter on the values of the DICOM tags", true) | |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3091 .SetRequestField(KEY_LABELS, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3092 "List of strings specifying which labels to look for in the resources (new in Orthanc 1.12.0)", true) |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3093 .SetRequestField(KEY_LABELS_CONSTRAINT, RestApiCallDocumentation::Type_String, |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3094 "Constraint on the labels, can be `All`, `Any`, or `None` (defaults to `All`, new in Orthanc 1.12.0)", true) |
|
5825
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3095 .SetRequestField(KEY_ORDER_BY, RestApiCallDocumentation::Type_JsonListOfObjects, |
|
5826
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3096 "Array of associative arrays containing the requested ordering (new in Orthanc 1.12.5)", true) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3097 .SetRequestField(KEY_PARENT_PATIENT, RestApiCallDocumentation::Type_String, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3098 "Limit the reported resources to descendants of this patient (new in Orthanc 1.12.5)", true) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3099 .SetRequestField(KEY_PARENT_STUDY, RestApiCallDocumentation::Type_String, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3100 "Limit the reported resources to descendants of this study (new in Orthanc 1.12.5)", true) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3101 .SetRequestField(KEY_PARENT_SERIES, RestApiCallDocumentation::Type_String, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3102 "Limit the reported resources to descendants of this series (new in Orthanc 1.12.5)", true) |
| 5828 | 3103 .SetRequestField(KEY_QUERY_METADATA, RestApiCallDocumentation::Type_JsonObject, |
| 3104 "Associative array containing the filter on the values of the metadata (new in Orthanc 1.12.5)", true) | |
| 5829 | 3105 .SetRequestField(KEY_RESPONSE_CONTENT, RestApiCallDocumentation::Type_JsonListOfStrings, |
| 3106 "Defines the content of response for each returned resource. Allowed values are `MainDicomTags`, " | |
| 3107 "`Metadata`, `Children`, `Parent`, `Labels`, `Status`, `IsStable`, `Attachments`. " | |
| 3108 "(new in Orthanc 1.12.5)", true) | |
| 4421 | 3109 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 3110 "about the reported resources (if `Expand` argument is `true`)"); | |
| 3111 return; | |
| 3112 } | |
| 3113 | |
| 1358 | 3114 ServerContext& context = OrthancRestApi::GetContext(call); |
| 1354 | 3115 |
| 3116 Json::Value request; | |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3117 if (!call.ParseJsonRequest(request) || |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3118 request.type() != Json::objectValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3119 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3120 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3121 "The body must contain a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3122 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3123 else if (!request.isMember(KEY_LEVEL) || |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3124 request[KEY_LEVEL].type() != Json::stringValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3125 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3126 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3127 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3128 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3129 else if (!request.isMember(KEY_QUERY) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3130 request[KEY_QUERY].type() != Json::objectValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3131 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3132 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3133 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3134 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3135 else if (request.isMember(KEY_CASE_SENSITIVE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3136 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3137 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3138 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3139 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" must be a Boolean"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3140 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3141 else if (request.isMember(KEY_LIMIT) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3142 request[KEY_LIMIT].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3143 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3144 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3145 "Field \"" + std::string(KEY_LIMIT) + "\" must be an integer"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3146 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3147 else if (request.isMember(KEY_SINCE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3148 request[KEY_SINCE].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3149 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3150 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3151 "Field \"" + std::string(KEY_SINCE) + "\" must be an integer"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3152 } |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3153 else if (request.isMember(KEY_REQUESTED_TAGS) && |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3154 request[KEY_REQUESTED_TAGS].type() != Json::arrayValue) |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3155 { |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3156 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3157 "Field \"" + std::string(KEY_REQUESTED_TAGS) + "\" must be an array"); |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3158 } |
| 5829 | 3159 else if (request.isMember(KEY_RESPONSE_CONTENT) && |
| 3160 request[KEY_RESPONSE_CONTENT].type() != Json::arrayValue) | |
| 3161 { | |
| 3162 throw OrthancException(ErrorCode_BadRequest, | |
| 3163 "Field \"" + std::string(KEY_RESPONSE_CONTENT) + "\" must be an array"); | |
| 3164 } | |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3165 else if (request.isMember(KEY_LABELS) && |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3166 request[KEY_LABELS].type() != Json::arrayValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3167 { |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3168 throw OrthancException(ErrorCode_BadRequest, |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3169 "Field \"" + std::string(KEY_LABELS) + "\" must be an array of strings"); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3170 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3171 else if (request.isMember(KEY_LABELS_CONSTRAINT) && |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3172 request[KEY_LABELS_CONSTRAINT].type() != Json::stringValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3173 { |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3174 throw OrthancException(ErrorCode_BadRequest, |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3175 "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be an array of strings"); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3176 } |
|
5825
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3177 else if (request.isMember(KEY_ORDER_BY) && |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3178 request[KEY_ORDER_BY].type() != Json::arrayValue) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3179 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3180 throw OrthancException(ErrorCode_BadRequest, |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3181 "Field \"" + std::string(KEY_ORDER_BY) + "\" must be an array"); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3182 } |
| 5828 | 3183 else if (request.isMember(KEY_QUERY_METADATA) && |
| 3184 request[KEY_QUERY_METADATA].type() != Json::objectValue) | |
| 3185 { | |
| 3186 throw OrthancException(ErrorCode_BadRequest, | |
| 3187 "Field \"" + std::string(KEY_QUERY_METADATA) + "\" must be an JSON object"); | |
| 3188 } | |
|
5826
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3189 else if (request.isMember(KEY_PARENT_PATIENT) && |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3190 request[KEY_PARENT_PATIENT].type() != Json::stringValue) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3191 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3192 throw OrthancException(ErrorCode_BadRequest, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3193 "Field \"" + std::string(KEY_PARENT_PATIENT) + "\" must be a string"); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3194 } |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3195 else if (request.isMember(KEY_PARENT_STUDY) && |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3196 request[KEY_PARENT_STUDY].type() != Json::stringValue) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3197 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3198 throw OrthancException(ErrorCode_BadRequest, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3199 "Field \"" + std::string(KEY_PARENT_STUDY) + "\" must be a string"); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3200 } |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3201 else if (request.isMember(KEY_PARENT_SERIES) && |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3202 request[KEY_PARENT_SERIES].type() != Json::stringValue) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3203 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3204 throw OrthancException(ErrorCode_BadRequest, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3205 "Field \"" + std::string(KEY_PARENT_SERIES) + "\" must be a string"); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3206 } |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3207 else if (true) |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3208 { |
| 5829 | 3209 ResponseContentFlags responseContent = ResponseContentFlags_ID; |
| 3210 | |
| 3211 if (request.isMember(KEY_RESPONSE_CONTENT)) | |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3212 { |
| 5832 | 3213 responseContent = ResponseContentFlags_Default; |
| 3214 | |
| 5829 | 3215 for (Json::ArrayIndex i = 0; i < request[KEY_RESPONSE_CONTENT].size(); ++i) |
| 3216 { | |
| 3217 responseContent = static_cast<ResponseContentFlags>(static_cast<uint32_t>(responseContent) | StringToResponseContent(request[KEY_RESPONSE_CONTENT][i].asString())); | |
| 3218 } | |
| 3219 } | |
| 3220 else if (request.isMember(KEY_EXPAND) && request[KEY_EXPAND].asBool()) | |
| 3221 { | |
| 5832 | 3222 responseContent = ResponseContentFlags_ExpandTrue; |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3223 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3224 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3225 const ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3226 |
| 5829 | 3227 ResourceFinder finder(level, responseContent); |
|
5688
d0a264b803f1
first implementation of database paging
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5684
diff
changeset
|
3228 finder.SetDatabaseLimits(context.GetDatabaseLimits(level)); |
|
5709
476b1db52110
removed the "format_" member from ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5708
diff
changeset
|
3229 |
|
476b1db52110
removed the "format_" member from ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5708
diff
changeset
|
3230 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3231 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3232 if (request.isMember(KEY_LIMIT)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3233 { |
| 5693 | 3234 int64_t tmp = request[KEY_LIMIT].asInt64(); |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3235 if (tmp < 0) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3236 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3237 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3238 "Field \"" + std::string(KEY_LIMIT) + "\" must be a positive integer"); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3239 } |
| 5695 | 3240 else if (tmp != 0) // This is for compatibility with Orthanc 1.12.4 |
| 5693 | 3241 { |
| 3242 finder.SetLimitsCount(static_cast<uint64_t>(tmp)); | |
| 3243 } | |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3244 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3245 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3246 if (request.isMember(KEY_SINCE)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3247 { |
| 5693 | 3248 int64_t tmp = request[KEY_SINCE].asInt64(); |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3249 if (tmp < 0) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3250 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3251 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3252 "Field \"" + std::string(KEY_SINCE) + "\" must be a positive integer"); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3253 } |
| 5693 | 3254 else |
| 3255 { | |
| 3256 finder.SetLimitsSince(static_cast<uint64_t>(tmp)); | |
| 3257 } | |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3258 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3259 |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3260 { |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3261 bool caseSensitive = false; |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3262 if (request.isMember(KEY_CASE_SENSITIVE)) |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3263 { |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3264 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3265 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3266 |
| 5828 | 3267 { // DICOM Tag query |
| 3268 DatabaseLookup dicomTagLookup; | |
| 3269 | |
| 3270 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); | |
| 3271 for (size_t i = 0; i < members.size(); i++) | |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3272 { |
| 5828 | 3273 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
| 3274 { | |
| 3275 throw OrthancException(ErrorCode_BadRequest, | |
| 3276 "Tag \"" + members[i] + "\" must be associated with a string"); | |
| 3277 } | |
| 3278 | |
| 3279 const std::string value = request[KEY_QUERY][members[i]].asString(); | |
| 3280 | |
| 3281 if (!value.empty()) | |
| 3282 { | |
| 3283 // An empty string corresponds to an universal constraint, | |
| 3284 // so we ignore it. This mimics the behavior of class | |
| 3285 // "OrthancFindRequestHandler" | |
| 3286 dicomTagLookup.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), | |
| 3287 value, caseSensitive, true); | |
| 3288 } | |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3289 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3290 |
| 5828 | 3291 finder.SetDatabaseLookup(dicomTagLookup); |
| 3292 } | |
| 3293 | |
| 3294 { // Metadata query | |
| 3295 Json::Value::Members members = request[KEY_QUERY_METADATA].getMemberNames(); | |
| 3296 for (size_t i = 0; i < members.size(); i++) | |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3297 { |
| 5828 | 3298 if (request[KEY_QUERY_METADATA][members[i]].type() != Json::stringValue) |
| 3299 { | |
| 3300 throw OrthancException(ErrorCode_BadRequest, | |
| 3301 "Tag \"" + members[i] + "\" must be associated with a string"); | |
| 3302 } | |
| 3303 MetadataType metadata = StringToMetadata(members[i]); | |
| 3304 | |
| 3305 const std::string value = request[KEY_QUERY_METADATA][members[i]].asString(); | |
| 3306 | |
| 3307 if (!value.empty()) | |
| 3308 { | |
| 3309 if (value.find('\\') != std::string::npos) | |
| 3310 { | |
| 3311 std::vector<std::string> items; | |
| 3312 Toolbox::TokenizeString(items, value, '\\'); | |
| 3313 | |
| 3314 finder.AddMetadataConstraint(new DatabaseMetadataConstraint(metadata, ConstraintType_List, items, caseSensitive)); | |
| 3315 } | |
| 3316 else if (value.find('*') != std::string::npos || value.find('?') != std::string::npos) | |
| 3317 { | |
| 3318 finder.AddMetadataConstraint(new DatabaseMetadataConstraint(metadata, ConstraintType_Wildcard, value, caseSensitive)); | |
| 3319 } | |
| 3320 else | |
| 3321 { | |
| 3322 finder.AddMetadataConstraint(new DatabaseMetadataConstraint(metadata, ConstraintType_Equal, value, caseSensitive)); | |
| 3323 } | |
| 3324 } | |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3325 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3326 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3327 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3328 |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3329 if (request.isMember(KEY_REQUESTED_TAGS)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3330 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3331 std::set<DicomTag> requestedTags; |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3332 FromDcmtkBridge::ParseListOfTags(requestedTags, request[KEY_REQUESTED_TAGS]); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3333 finder.AddRequestedTags(requestedTags); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3334 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3335 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3336 if (request.isMember(KEY_LABELS)) // New in Orthanc 1.12.0 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3337 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3338 for (Json::Value::ArrayIndex i = 0; i < request[KEY_LABELS].size(); i++) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3339 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3340 if (request[KEY_LABELS][i].type() != Json::stringValue) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3341 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3342 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS) + "\" must contain strings"); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3343 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3344 else |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3345 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3346 finder.AddLabel(request[KEY_LABELS][i].asString()); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3347 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3348 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3349 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3350 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3351 finder.SetLabelsConstraint(LabelsConstraint_All); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3352 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3353 if (request.isMember(KEY_LABELS_CONSTRAINT)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3354 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3355 const std::string& s = request[KEY_LABELS_CONSTRAINT].asString(); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3356 if (s == "All") |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3357 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3358 finder.SetLabelsConstraint(LabelsConstraint_All); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3359 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3360 else if (s == "Any") |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3361 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3362 finder.SetLabelsConstraint(LabelsConstraint_Any); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3363 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3364 else if (s == "None") |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3365 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3366 finder.SetLabelsConstraint(LabelsConstraint_None); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3367 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3368 else |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3369 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3370 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be \"All\", \"Any\", or \"None\""); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3371 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3372 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3373 |
|
5826
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3374 if (request.isMember(KEY_PARENT_PATIENT)) // New in Orthanc 1.12.5 |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3375 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3376 finder.SetOrthancId(ResourceType_Patient, request[KEY_PARENT_PATIENT].asString()); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3377 } |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3378 else if (request.isMember(KEY_PARENT_STUDY)) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3379 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3380 finder.SetOrthancId(ResourceType_Study, request[KEY_PARENT_STUDY].asString()); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3381 } |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3382 else if (request.isMember(KEY_PARENT_SERIES)) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3383 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3384 finder.SetOrthancId(ResourceType_Series, request[KEY_PARENT_SERIES].asString()); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3385 } |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3386 |
|
5825
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3387 if (request.isMember(KEY_ORDER_BY)) // New in Orthanc 1.12.5 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3388 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3389 for (Json::Value::ArrayIndex i = 0; i < request[KEY_ORDER_BY].size(); i++) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3390 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3391 if (request[KEY_ORDER_BY][i].type() != Json::objectValue) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3392 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3393 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY) + "\" must contain objects"); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3394 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3395 else |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3396 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3397 const Json::Value& order = request[KEY_ORDER_BY][i]; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3398 FindRequest::OrderingDirection direction; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3399 std::string directionString; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3400 std::string typeString; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3401 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3402 if (!order.isMember(KEY_ORDER_BY_KEY) || order[KEY_ORDER_BY_KEY].type() != Json::stringValue) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3403 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3404 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY_KEY) + "\" must be a string"); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3405 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3406 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3407 if (!order.isMember(KEY_ORDER_BY_DIRECTION) || order[KEY_ORDER_BY_DIRECTION].type() != Json::stringValue) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3408 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3409 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY_DIRECTION) + "\" must be \"ASC\" or \"DESC\""); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3410 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3411 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3412 Toolbox::ToLowerCase(directionString, order[KEY_ORDER_BY_DIRECTION].asString()); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3413 if (directionString == "asc") |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3414 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3415 direction = FindRequest::OrderingDirection_Ascending; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3416 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3417 else if (directionString == "desc") |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3418 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3419 direction = FindRequest::OrderingDirection_Descending; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3420 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3421 else |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3422 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3423 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY_DIRECTION) + "\" must be \"ASC\" or \"DESC\""); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3424 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3425 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3426 if (!order.isMember(KEY_ORDER_BY_TYPE) || order[KEY_ORDER_BY_TYPE].type() != Json::stringValue) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3427 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3428 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY_TYPE) + "\" must be \"DicomTag\" or \"Metadata\""); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3429 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3430 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3431 Toolbox::ToLowerCase(typeString, order[KEY_ORDER_BY_TYPE].asString()); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3432 if (typeString == "dicomtag") |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3433 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3434 DicomTag tag = FromDcmtkBridge::ParseTag(order[KEY_ORDER_BY_KEY].asString()); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3435 finder.AddOrdering(tag, direction); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3436 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3437 else if (typeString == "metadata") |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3438 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3439 MetadataType metadata = StringToMetadata(order[KEY_ORDER_BY_KEY].asString()); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3440 finder.AddOrdering(metadata, direction); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3441 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3442 else |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3443 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3444 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY_TYPE) + "\" must be \"DicomTag\" or \"Metadata\""); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3445 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3446 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3447 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3448 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3449 |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3450 Json::Value answer; |
|
5713
d851a54e49b7
removed "includeAllMetadata_" member from ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5709
diff
changeset
|
3451 finder.Execute(answer, context, format, false /* no "Metadata" field */); |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3452 call.GetOutput().AnswerJson(answer); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3453 } |
| 1354 | 3454 } |
| 3455 | |
| 3456 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3457 template <enum ResourceType start, |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3458 enum ResourceType end> |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3459 static void GetChildResources(RestApiGetCall& call) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3460 { |
| 4415 | 3461 if (call.IsDocumentation()) |
| 3462 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3463 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3464 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3465 |
| 4415 | 3466 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
| 3467 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3468 call.GetDocumentation() | |
| 3469 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3470 .SetSummary("Get child " + children) | |
| 3471 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3472 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3473 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3474 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
|
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3475 "If false or missing, only retrieve the list of child " + children, false) |
| 4415 | 3476 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) |
| 3477 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
| 3478 return; | |
| 3479 } | |
| 3480 | |
|
5617
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3481 const bool expand = (!call.HasArgument("expand") || |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3482 // this "expand" is the only one to have a false default value to keep backward compatibility |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3483 call.GetBooleanArgument("expand", false)); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3484 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3485 |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3486 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3487 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3488 |
|
5833
58c549b881ae
merged find-refactoring -> find-refactoring-clean
Alain Mazy <am@orthanc.team>
diff
changeset
|
3489 ResourceFinder finder(end, (expand ? ResponseContentFlags_ExpandTrue : ResponseContentFlags_ID)); |
|
5704
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3490 finder.SetOrthancId(start, call.GetUriComponent("id", "")); |
|
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3491 finder.AddRequestedTags(requestedTags); |
|
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3492 |
|
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3493 Json::Value answer; |
|
5715
593e110de3d8
integration find-refactoring->find-refactoring-clean
Sebastien Jodogne <s.jodogne@gmail.com>
diff
changeset
|
3494 finder.Execute(answer, OrthancRestApi::GetContext(call), format, false /* no "Metadata" field */); |
|
5704
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3495 call.GetOutput().AnswerJson(answer); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3496 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3497 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3498 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3499 static void GetChildInstancesTags(RestApiGetCall& call) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3500 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3501 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3502 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3503 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3504 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3505 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3506 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3507 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3508 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3509 .SetSummary("Get tags of instances") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3510 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3511 " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3512 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3513 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3514 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3515 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3516 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3517 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3518 } |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3519 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3520 ServerContext& context = OrthancRestApi::GetContext(call); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3521 std::string publicId = call.GetUriComponent("id", ""); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3522 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3523 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3524 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3525 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3526 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3527 // Retrieve all the instances of this patient/study/series |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3528 typedef std::list<std::string> Instances; |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3529 Instances instances; |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3530 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3531 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3532 |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3533 Json::Value result = Json::objectValue; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3534 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3535 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 3536 it != instances.end(); ++it) |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3537 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3538 Json::Value full; |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3539 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3540 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3541 if (format != DicomToJsonFormat_Full) |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3542 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3543 Json::Value simplified; |
|
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
3544 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3545 result[*it] = simplified; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3546 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3547 else |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3548 { |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3549 result[*it] = full; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3550 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3551 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3552 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3553 call.GetOutput().AnswerJson(result); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3554 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3555 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3556 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3557 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3558 template <enum ResourceType start, |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3559 enum ResourceType end> |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3560 static void GetParentResource(RestApiGetCall& call) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3561 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3562 assert(start > end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3563 |
| 4415 | 3564 if (call.IsDocumentation()) |
| 3565 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3566 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3567 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3568 |
| 4415 | 3569 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
| 3570 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3571 call.GetDocumentation() | |
| 3572 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3573 .SetSummary("Get parent " + parent) | |
| 3574 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3575 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3576 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 3577 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
| 3578 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
| 3579 return; | |
| 3580 } | |
| 3581 | |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3582 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3583 |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3584 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3585 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3586 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3587 std::string current = call.GetUriComponent("id", ""); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3588 ResourceType currentType = start; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3589 while (currentType > end) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3590 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3591 std::string parent; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3592 if (!index.LookupParent(parent, current)) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3593 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3594 // Error that could happen if the resource gets deleted by |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3595 // another concurrent call |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3596 return; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3597 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3598 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3599 current = parent; |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3600 currentType = GetParentResourceType(currentType); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3601 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3602 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3603 assert(currentType == end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3604 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3605 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3606 |
| 4554 | 3607 Json::Value resource; |
|
5715
593e110de3d8
integration find-refactoring->find-refactoring-clean
Sebastien Jodogne <s.jodogne@gmail.com>
diff
changeset
|
3608 if (ExpandResource(resource, OrthancRestApi::GetContext(call), currentType, current, format, false)) |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3609 { |
| 4554 | 3610 call.GetOutput().AnswerJson(resource); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3611 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3612 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3613 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3614 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3615 static void ExtractPdf(RestApiGetCall& call) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3616 { |
| 4407 | 3617 if (call.IsDocumentation()) |
| 3618 { | |
| 3619 call.GetDocumentation() | |
| 3620 .SetTag("Instances") | |
| 3621 .SetSummary("Get embedded PDF") | |
| 3622 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
| 3623 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
| 3624 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
| 3625 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
| 3626 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
| 3627 return; | |
| 3628 } | |
| 3629 | |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3630 const std::string id = call.GetUriComponent("id", ""); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3631 std::string pdf; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3632 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3633 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3634 if (locker.GetDicom().ExtractPdf(pdf)) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3635 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3636 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3637 return; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3638 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3639 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3640 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3641 |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3642 static void OrderSlices(RestApiGetCall& call) |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3643 { |
| 4421 | 3644 if (call.IsDocumentation()) |
| 3645 { | |
| 3646 call.GetDocumentation() | |
| 3647 .SetDeprecated() | |
| 3648 .SetTag("Series") | |
| 3649 .SetSummary("Order the slices") | |
| 3650 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
| 3651 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
| 3652 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
| 3653 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3654 "Ordered list of paths to DICOM instances") | |
| 3655 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3656 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
| 3657 "in the case of multiframe images.") | |
| 3658 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
| 3659 "Same information as the `Slices` field, but in a compact form") | |
| 3660 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
| 3661 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3662 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); |
| 4421 | 3663 return; |
| 3664 } | |
| 3665 | |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3666 const std::string id = call.GetUriComponent("id", ""); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3667 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3668 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3669 SliceOrdering ordering(index, id); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3670 |
|
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3671 Json::Value result; |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3672 ordering.Format(result); |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3673 call.GetOutput().AnswerJson(result); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3674 } |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3675 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3676 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3677 static void GetInstanceHeader(RestApiGetCall& call) |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3678 { |
| 4404 | 3679 if (call.IsDocumentation()) |
| 3680 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3681 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 3682 call.GetDocumentation() |
| 3683 .SetTag("Instances") | |
| 3684 .SetSummary("Get DICOM meta-header") | |
| 3685 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
| 3686 "combines hexadecimal tags with human-readable description.") | |
| 3687 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 3688 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3689 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); |
| 4404 | 3690 return; |
| 3691 } | |
| 3692 | |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3693 ServerContext& context = OrthancRestApi::GetContext(call); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3694 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3695 std::string publicId = call.GetUriComponent("id", ""); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3696 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3697 std::string dicomContent; |
|
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
3698 context.ReadDicomForHeader(dicomContent, publicId); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3699 |
|
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3700 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3701 // speed up things here |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3702 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3703 ParsedDicomFile dicom(dicomContent); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3704 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3705 Json::Value header; |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3706 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3707 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3708 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3709 } |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3710 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3711 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3712 static void InvalidateTags(RestApiPostCall& call) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3713 { |
| 4420 | 3714 if (call.IsDocumentation()) |
| 3715 { | |
| 3716 call.GetDocumentation() | |
| 3717 .SetTag("System") | |
| 3718 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
| 3719 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
| 3720 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
| 3721 "This is notably useful after changes to the `Dictionary` configuration option. " | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3722 "https://orthanc.uclouvain.be/book/faq/orthanc-storage.html#storage-area"); |
| 4420 | 3723 return; |
| 3724 } | |
| 3725 | |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3726 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3727 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3728 // Loop over the instances, grouping them by parent studies so as |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3729 // to avoid large memory consumption |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3730 std::list<std::string> studies; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3731 index.GetAllUuids(studies, ResourceType_Study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3732 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3733 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3734 study = studies.begin(); study != studies.end(); ++study) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3735 { |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3736 std::list<std::string> instances; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3737 index.GetChildInstances(instances, *study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3738 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3739 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3740 instance = instances.begin(); instance != instances.end(); ++instance) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3741 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3742 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3743 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3744 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3745 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3746 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3747 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3748 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3749 |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3750 void DocumentReconstructFilesField(RestApiPostCall& call, bool documentLimitField) |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3751 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3752 call.GetDocumentation() |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3753 .SetRequestField(RECONSTRUCT_FILES, RestApiCallDocumentation::Type_Boolean, |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3754 "Also reconstruct the files of the resources (e.g: apply IngestTranscoding, StorageCompression). " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3755 "'false' by default. (New in Orthanc 1.11.0)", false); |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3756 if (documentLimitField) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3757 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3758 call.GetDocumentation() |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3759 .SetRequestField(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS, RestApiCallDocumentation::Type_Boolean, |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3760 "Only reconstruct this level MainDicomTags by re-reading them from a random child instance of the resource. " |
| 5655 | 3761 "This option is much faster than a full reconstruct and is useful e.g. if you have modified the " |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3762 "'ExtraMainDicomTags' at the Study level to optimize the speed of some C-Find. " |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3763 "'false' by default. (New in Orthanc 1.12.4)", false); |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3764 } |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3765 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3766 |
| 4994 | 3767 bool GetReconstructFilesField(const RestApiPostCall& call) |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3768 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3769 bool reconstructFiles = false; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3770 Json::Value request; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3771 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3772 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(RECONSTRUCT_FILES)) // allow "" payload to keep backward compatibility |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3773 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3774 if (!request[RECONSTRUCT_FILES].isBool()) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3775 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3776 throw OrthancException(ErrorCode_BadFileFormat, |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3777 "The field " + std::string(RECONSTRUCT_FILES) + " must contain a Boolean"); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3778 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3779 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3780 reconstructFiles = request[RECONSTRUCT_FILES].asBool(); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3781 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3782 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3783 return reconstructFiles; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3784 } |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3785 |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3786 bool GetLimitToThisLevelMainDicomTags(const RestApiPostCall& call) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3787 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3788 bool limitToThisLevel = false; |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3789 Json::Value request; |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3790 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3791 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS)) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3792 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3793 if (!request[LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS].isBool()) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3794 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3795 throw OrthancException(ErrorCode_BadFileFormat, |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3796 "The field " + std::string(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS) + " must contain a Boolean"); |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3797 } |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3798 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3799 limitToThisLevel = request[LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS].asBool(); |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3800 } |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3801 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3802 return limitToThisLevel; |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3803 } |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3804 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3805 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3806 template <enum ResourceType type> |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3807 static void ReconstructResource(RestApiPostCall& call) |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3808 { |
| 4420 | 3809 if (call.IsDocumentation()) |
| 3810 { | |
| 3811 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
| 3812 call.GetDocumentation() | |
| 3813 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3814 .SetSummary("Reconstruct tags & optionally files of " + resource) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3815 .SetDescription("Reconstruct the main DICOM tags in DB of the " + resource + " whose Orthanc identifier is provided " |
| 4420 | 3816 "in the URL. This is useful if child studies/series/instances have inconsistent values for " |
| 3817 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
| 3818 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
| 3819 "parsed again, and the Orthanc index will be updated accordingly.") | |
| 3820 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3821 DocumentReconstructFilesField(call, true); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3822 |
| 4420 | 3823 return; |
| 3824 } | |
| 3825 | |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3826 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3827 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", ""), GetReconstructFilesField(call), GetLimitToThisLevelMainDicomTags(call), type); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3828 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3829 } |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3830 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3831 |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3832 static void ReconstructAllResources(RestApiPostCall& call) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3833 { |
| 4420 | 3834 if (call.IsDocumentation()) |
| 3835 { | |
| 3836 call.GetDocumentation() | |
| 3837 .SetTag("System") | |
| 3838 .SetSummary("Reconstruct all the index") | |
| 3839 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
| 3840 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
| 3841 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3842 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated. " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3843 "If you have a large database to process, it is advised to use the Housekeeper plugin to perform " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3844 "this action resource by resource"); |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3845 DocumentReconstructFilesField(call, false); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3846 |
| 4420 | 3847 return; |
| 3848 } | |
| 3849 | |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3850 ServerContext& context = OrthancRestApi::GetContext(call); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3851 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3852 std::list<std::string> studies; |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3853 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3854 bool reconstructFiles = GetReconstructFilesField(call); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3855 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3856 for (std::list<std::string>::const_iterator |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3857 study = studies.begin(); study != studies.end(); ++study) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3858 { |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3859 ServerToolbox::ReconstructResource(context, *study, reconstructFiles, false, ResourceType_Study /* dummy */); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3860 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3861 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3862 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3863 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3864 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3865 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3866 static void GetBulkChildren(std::set<std::string>& target, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3867 ServerIndex& index, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3868 const std::set<std::string>& source) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3869 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3870 target.clear(); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3871 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3872 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3873 it = source.begin(); it != source.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3874 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3875 std::list<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3876 index.GetChildren(children, *it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3877 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3878 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3879 child = children.begin(); child != children.end(); ++child) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3880 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3881 target.insert(*child); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3882 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3883 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3884 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3885 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3886 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3887 static void BulkContent(RestApiPostCall& call) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3888 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3889 static const char* const LEVEL = "Level"; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3890 static const char* const METADATA = "Metadata"; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3891 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3892 if (call.IsDocumentation()) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3893 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3894 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3895 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3896 call.GetDocumentation() |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3897 .SetTag("System") |
| 4879 | 3898 .SetSummary("Describe a set of resources") |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3899 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3900 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3901 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3902 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3903 "`Instance`). Orthanc will loop over the items inside `Resources`, and explore upward or " |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3904 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3905 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3906 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3907 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3908 "whose identifiers are provided in the `Resources` field, in one single call."); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3909 return; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3910 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3911 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3912 Json::Value request; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3913 if (!call.ParseJsonRequest(request) || |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3914 request.type() != Json::objectValue) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3915 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3916 throw OrthancException(ErrorCode_BadRequest, |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3917 "The body must contain a JSON object"); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3918 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3919 else |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3920 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3921 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3922 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3923 bool metadata = true; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3924 if (request.isMember(METADATA)) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3925 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3926 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3927 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3928 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3929 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3930 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3931 Json::Value answer = Json::arrayValue; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3932 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3933 if (request.isMember(LEVEL)) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3934 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3935 // Complex case: Need to explore the DICOM hierarchy |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3936 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3937 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3938 std::set<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3939 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3940 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3941 std::set<std::string> interest; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3942 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3943 assert(ResourceType_Patient < ResourceType_Study && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3944 ResourceType_Study < ResourceType_Series && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3945 ResourceType_Series < ResourceType_Instance); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3946 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3947 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3948 it = resources.begin(); it != resources.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3949 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3950 ResourceType type; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3951 if (index.LookupResourceType(type, *it)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3952 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3953 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3954 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3955 // This resource is already from the level of interest |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3956 interest.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3957 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3958 else if (type < level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3959 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3960 // Need to explore children |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3961 std::set<std::string> current; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3962 current.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3963 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3964 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3965 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3966 std::set<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3967 GetBulkChildren(children, index, current); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3968 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3969 type = GetChildResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3970 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3971 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3972 for (std::set<std::string>::const_iterator |
| 4716 | 3973 it2 = children.begin(); it2 != children.end(); ++it2) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3974 { |
| 4716 | 3975 interest.insert(*it2); |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3976 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3977 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3978 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3979 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3980 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3981 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3982 current.swap(children); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3983 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3984 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3985 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3986 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3987 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3988 // Need to explore parents |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3989 std::string current = *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3990 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3991 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3992 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3993 std::string parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3994 if (index.LookupParent(parent, current)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3995 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3996 type = GetParentResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3997 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3998 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3999 interest.insert(parent); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4000 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4001 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4002 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4003 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4004 current = parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4005 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4006 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4007 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4008 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4009 break; // The resource has been deleted during the exploration |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4010 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4011 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4012 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4013 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4014 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4015 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4016 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4017 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4018 } |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4019 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4020 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4021 it = interest.begin(); it != interest.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4022 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4023 Json::Value item; |
|
5715
593e110de3d8
integration find-refactoring->find-refactoring-clean
Sebastien Jodogne <s.jodogne@gmail.com>
diff
changeset
|
4024 if (ExpandResource(item, OrthancRestApi::GetContext(call), level, *it, format, metadata)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4025 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4026 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4027 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4028 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4029 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4030 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4031 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4032 // Simple case: We return the queried resources as such |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4033 std::list<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4034 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4035 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4036 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4037 it = resources.begin(); it != resources.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4038 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4039 ResourceType level; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4040 Json::Value item; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
4041 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4042 if (index.LookupResourceType(level, *it) && |
|
5715
593e110de3d8
integration find-refactoring->find-refactoring-clean
Sebastien Jodogne <s.jodogne@gmail.com>
diff
changeset
|
4043 ExpandResource(item, OrthancRestApi::GetContext(call), level, *it, format, metadata)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4044 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4045 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4046 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4047 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4048 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4049 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4050 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4051 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4052 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4053 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4054 call.GetOutput().AnswerJson(answer); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4055 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4056 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4057 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4058 |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4059 static void BulkDelete(RestApiPostCall& call) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4060 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4061 if (call.IsDocumentation()) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4062 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4063 call.GetDocumentation() |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4064 .SetTag("System") |
| 4879 | 4065 .SetSummary("Delete a set of resources") |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4066 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4067 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4068 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4069 "whose identifiers are provided in the `Resources` field."); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4070 return; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4071 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4072 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4073 ServerContext& context = OrthancRestApi::GetContext(call); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4074 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4075 Json::Value request; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4076 if (!call.ParseJsonRequest(request) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4077 request.type() != Json::objectValue) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4078 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4079 throw OrthancException(ErrorCode_BadRequest, |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4080 "The body must contain a JSON object"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4081 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4082 else |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4083 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4084 std::set<std::string> resources; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4085 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4086 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4087 for (std::set<std::string>::const_iterator |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4088 it = resources.begin(); it != resources.end(); ++it) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4089 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4090 ResourceType type; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4091 Json::Value remainingAncestor; // Unused |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4092 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4093 if (!context.GetIndex().LookupResourceType(type, *it) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4094 !context.DeleteResource(remainingAncestor, *it, type)) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4095 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4096 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4097 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4098 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4099 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4100 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4101 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4102 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4103 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4104 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4105 void OrthancRestApi::RegisterResources() |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4106 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4107 Register("/instances", ListResources<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4108 Register("/patients", ListResources<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4109 Register("/series", ListResources<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4110 Register("/studies", ListResources<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4111 |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4112 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4113 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4114 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4115 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4116 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4117 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4118 |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4119 Register("/tools/bulk-delete", BulkDelete); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4120 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4121 else |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4122 { |
| 5817 | 4123 LOG(WARNING) << "READ-ONLY SYSTEM: deactivating DELETE routes"; |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4124 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4125 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4126 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4127 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4128 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4129 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4130 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4131 Register("/instances/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4132 Register("/patients/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4133 Register("/studies/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4134 Register("/series/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4135 |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4136 Register("/patients/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4137 Register("/series/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4138 Register("/studies/{id}/shared-tags", GetSharedTags); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
4139 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4140 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4141 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4142 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4143 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4144 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
4145 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4146 Register("/instances/{id}/file", GetInstanceFile); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4147 Register("/instances/{id}/export", ExportInstanceFile); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4148 Register("/instances/{id}/tags", GetInstanceTags); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4149 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4150 Register("/instances/{id}/frames", ListFrames); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4151 |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
4152 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4153 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4154 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4155 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4156 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4157 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4158 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4159 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4160 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4161 Register("/instances/{id}/frames/{frame}/numpy", GetNumpyFrame); // New in Orthanc 1.10.0 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
4162 Register("/instances/{id}/pdf", ExtractPdf); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4163 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4164 Register("/instances/{id}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4165 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4166 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4167 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4168 Register("/instances/{id}/matlab", GetMatlabImage); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4169 Register("/instances/{id}/header", GetInstanceHeader); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4170 Register("/instances/{id}/numpy", GetNumpyInstance); // New in Orthanc 1.10.0 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4171 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4172 Register("/patients/{id}/protected", IsProtectedPatient); |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4173 |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4174 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4175 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4176 Register("/patients/{id}/protected", SetPatientProtection); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4177 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4178 else |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4179 { |
| 5817 | 4180 LOG(WARNING) << "READ-ONLY SYSTEM: deactivating PUT /patients/{id}/protected route"; |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4181 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4182 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4183 |
| 4409 | 4184 std::vector<std::string> resourceTypes; |
| 4185 resourceTypes.push_back("patients"); | |
| 4186 resourceTypes.push_back("studies"); | |
| 4187 resourceTypes.push_back("series"); | |
| 4188 resourceTypes.push_back("instances"); | |
| 4189 | |
| 4190 for (size_t i = 0; i < resourceTypes.size(); i++) | |
| 4191 { | |
| 4192 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
| 4193 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
| 4194 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
| 4195 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4196 |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4197 // New in Orthanc 1.12.0 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4198 Register("/" + resourceTypes[i] + "/{id}/labels", ListLabels); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4199 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", GetLabel); |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4200 |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4201 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4202 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4203 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", RemoveLabel); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4204 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", AddLabel); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4205 } |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4206 |
| 4409 | 4207 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
| 4208 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
| 4209 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
| 4210 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
| 4211 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
| 4212 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
| 4213 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
| 4214 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
| 4215 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
4216 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/info", GetAttachmentInfo); |
| 4409 | 4217 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4218 |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4219 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4220 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4221 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4222 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4223 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4224 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4225 } |
| 4409 | 4226 } |
| 782 | 4227 |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4228 if (context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4229 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4230 LOG(WARNING) << "READ-ONLY SYSTEM: deactivating PUT, POST and DELETE attachments routes"; |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4231 LOG(WARNING) << "READ-ONLY SYSTEM: deactivating PUT and DELETE labels routes"; |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4232 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4233 |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4234 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4235 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4236 Register("/tools/invalidate-tags", InvalidateTags); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4237 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4238 |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4239 Register("/tools/lookup", Lookup); |
| 1354 | 4240 Register("/tools/find", Find); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4241 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4242 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4243 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4244 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4245 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4246 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4247 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4248 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4249 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4250 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4251 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4252 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4253 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4254 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4255 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4256 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4257 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4258 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4259 |
| 782 | 4260 Register("/instances/{id}/content/*", GetRawContent); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4261 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4262 Register("/series/{id}/ordered-slices", OrderSlices); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4263 Register("/series/{id}/numpy", GetNumpySeries); // New in Orthanc 1.10.0 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4264 |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4265 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4266 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4267 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4268 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4269 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4270 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4271 Register("/tools/reconstruct", ReconstructAllResources); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4272 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4273 else |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4274 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4275 LOG(WARNING) << "READ-ONLY SYSTEM: deactivating /reconstruct routes"; |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4276 } |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4277 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4278 Register("/tools/bulk-content", BulkContent); |
|
5804
25df40a274fd
/changes: allowing filtering on multiple changes
Alain Mazy <am@orthanc.team>
parents:
5783
diff
changeset
|
4279 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4280 } |