Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 4694:da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
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| date | Wed, 16 Jun 2021 17:37:47 +0200 |
| parents | b1d87d41874e |
| children | 569d9ef165b1 |
| rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
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6 * |
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7 * This program is free software: you can redistribute it and/or |
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8 * modify it under the terms of the GNU General Public License as |
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9 * published by the Free Software Foundation, either version 3 of the |
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10 * License, or (at your option) any later version. |
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11 * |
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12 * In addition, as a special exception, the copyright holders of this |
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13 * program give permission to link the code of its release with the |
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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15 * that use the same license as the "OpenSSL" library), and distribute |
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16 * the linked executables. You must obey the GNU General Public License |
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17 * in all respects for all of the code used other than "OpenSSL". If you |
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18 * modify file(s) with this exception, you may extend this exception to |
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19 * your version of the file(s), but you are not obligated to do so. If |
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20 * you do not wish to do so, delete this exception statement from your |
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21 * version. If you delete this exception statement from all source files |
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22 * in the program, then also delete it here. |
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23 * |
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24 * This program is distributed in the hope that it will be useful, but |
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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27 * General Public License for more details. |
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28 * |
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29 * You should have received a copy of the GNU General Public License |
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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31 **/ |
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32 |
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33 |
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34 #include "../PrecompiledHeadersServer.h" |
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35 #include "OrthancRestApi.h" |
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36 |
| 4045 | 37 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
| 38 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
| 39 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
| 40 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
| 41 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
| 42 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
| 43 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
| 44 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
| 45 #include "../../../OrthancFramework/Sources/Logging.h" | |
| 46 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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47 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
| 4045 | 48 |
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49 #include "../OrthancConfiguration.h" |
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50 #include "../Search/DatabaseLookup.h" |
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51 #include "../ServerContext.h" |
| 2131 | 52 #include "../ServerToolbox.h" |
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53 #include "../SliceOrdering.h" |
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54 |
| 3687 | 55 // This "include" is mandatory for Release builds using Linux Standard Base |
| 56 #include <boost/math/special_functions/round.hpp> | |
| 57 | |
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58 |
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59 /** |
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60 * This semaphore is used to limit the number of concurrent HTTP |
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61 * requests on CPU-intensive routes of the REST API, in order to |
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62 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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63 **/ |
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64 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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65 |
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66 |
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67 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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68 |
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69 |
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70 namespace Orthanc |
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71 { |
| 4415 | 72 static std::string GetDocumentationSampleResource(ResourceType type) |
| 73 { | |
| 74 switch (type) | |
| 75 { | |
| 76 case Orthanc::ResourceType_Instance: | |
| 77 return "https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2"; | |
| 78 break; | |
| 79 | |
| 80 case Orthanc::ResourceType_Series: | |
| 81 return "https://demo.orthanc-server.com/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; | |
| 82 break; | |
| 83 | |
| 84 case Orthanc::ResourceType_Study: | |
| 85 return "https://demo.orthanc-server.com/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; | |
| 86 break; | |
| 87 | |
| 88 case Orthanc::ResourceType_Patient: | |
| 89 return "https://demo.orthanc-server.com/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; | |
| 90 break; | |
| 91 | |
| 92 default: | |
| 93 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 94 } | |
| 95 } | |
| 96 | |
| 97 | |
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98 static void AnswerDicomAsJson(RestApiCall& call, |
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99 const Json::Value& dicom, |
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100 DicomToJsonFormat mode) |
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101 { |
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102 if (mode != DicomToJsonFormat_Full) |
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103 { |
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104 Json::Value simplified; |
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105 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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106 call.GetOutput().AnswerJson(simplified); |
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107 } |
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108 else |
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109 { |
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110 call.GetOutput().AnswerJson(dicom); |
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111 } |
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112 } |
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113 |
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114 |
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115 static DicomToJsonFormat GetDicomFormat(const RestApiGetCall& call) |
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116 { |
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117 if (call.HasArgument("simplify")) |
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118 { |
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119 return DicomToJsonFormat_Human; |
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120 } |
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121 else if (call.HasArgument("short")) |
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122 { |
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123 return DicomToJsonFormat_Short; |
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124 } |
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125 else |
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126 { |
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127 return DicomToJsonFormat_Full; |
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128 } |
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129 } |
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130 |
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131 |
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132 static void AnswerDicomAsJson(RestApiGetCall& call, |
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133 const Json::Value& dicom) |
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134 { |
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135 AnswerDicomAsJson(call, dicom, GetDicomFormat(call)); |
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136 } |
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137 |
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138 |
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139 static void ParseSetOfTags(std::set<DicomTag>& target, |
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140 const RestApiGetCall& call, |
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141 const std::string& argument) |
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142 { |
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143 target.clear(); |
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144 |
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145 if (call.HasArgument(argument)) |
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146 { |
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147 std::vector<std::string> tags; |
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148 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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149 |
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150 for (size_t i = 0; i < tags.size(); i++) |
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151 { |
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152 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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153 } |
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154 } |
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155 } |
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156 |
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157 |
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158 // List all the patients, studies, series or instances ---------------------- |
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159 |
| 1354 | 160 static void AnswerListOfResources(RestApiOutput& output, |
| 161 ServerIndex& index, | |
| 162 const std::list<std::string>& resources, | |
| 163 ResourceType level, | |
| 164 bool expand) | |
| 165 { | |
| 166 Json::Value answer = Json::arrayValue; | |
| 167 | |
| 168 for (std::list<std::string>::const_iterator | |
| 1384 | 169 resource = resources.begin(); resource != resources.end(); ++resource) |
| 1354 | 170 { |
| 171 if (expand) | |
| 172 { | |
| 4554 | 173 Json::Value expanded; |
| 174 if (index.ExpandResource(expanded, *resource, level)) | |
| 1354 | 175 { |
| 4554 | 176 answer.append(expanded); |
| 1354 | 177 } |
| 178 } | |
| 179 else | |
| 180 { | |
| 181 answer.append(*resource); | |
| 182 } | |
| 183 } | |
| 184 | |
| 185 output.AnswerJson(answer); | |
| 186 } | |
| 187 | |
| 188 | |
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189 template <enum ResourceType resourceType> |
| 974 | 190 static void ListResources(RestApiGetCall& call) |
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191 { |
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192 if (call.IsDocumentation()) |
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193 { |
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194 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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195 call.GetDocumentation() |
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196 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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197 .SetSummary("List the available " + resources) |
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198 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
| 4403 | 199 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
| 200 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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201 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
| 4403 | 202 "If present, retrieve detailed information about the individual " + resources, false) |
| 4404 | 203 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 204 "about the reported " + resources + " (if `expand` argument is provided)") | |
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205 .SetHttpGetSample("https://demo.orthanc-server.com/" + resources + "?since=0&limit=2", true); |
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206 return; |
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207 } |
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208 |
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209 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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210 |
| 1354 | 211 std::list<std::string> result; |
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212 |
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213 if (call.HasArgument("limit") || |
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214 call.HasArgument("since")) |
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215 { |
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216 if (!call.HasArgument("limit")) |
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217 { |
| 2955 | 218 throw OrthancException(ErrorCode_BadRequest, |
| 219 "Missing \"limit\" argument for GET request against: " + | |
| 220 call.FlattenUri()); | |
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221 } |
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222 |
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223 if (!call.HasArgument("since")) |
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224 { |
| 2955 | 225 throw OrthancException(ErrorCode_BadRequest, |
| 226 "Missing \"since\" argument for GET request against: " + | |
| 227 call.FlattenUri()); | |
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228 } |
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229 |
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230 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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231 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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232 index.GetAllUuids(result, resourceType, since, limit); |
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233 } |
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234 else |
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235 { |
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236 index.GetAllUuids(result, resourceType); |
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237 } |
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238 |
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239 |
| 1354 | 240 AnswerListOfResources(call.GetOutput(), index, result, resourceType, call.HasArgument("expand")); |
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241 } |
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242 |
| 4409 | 243 |
| 244 | |
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245 template <enum ResourceType resourceType> |
| 974 | 246 static void GetSingleResource(RestApiGetCall& call) |
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247 { |
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248 if (call.IsDocumentation()) |
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249 { |
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250 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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251 call.GetDocumentation() |
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252 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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253 .SetSummary("Get information about some " + resource) |
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254 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 255 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 4409 | 256 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
| 257 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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258 return; |
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259 } |
|
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260 |
| 4554 | 261 Json::Value json; |
| 262 if (OrthancRestApi::GetIndex(call).ExpandResource(json, call.GetUriComponent("id", ""), resourceType)) | |
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263 { |
| 4554 | 264 call.GetOutput().AnswerJson(json); |
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265 } |
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266 } |
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267 |
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268 template <enum ResourceType resourceType> |
| 974 | 269 static void DeleteSingleResource(RestApiDeleteCall& call) |
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270 { |
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271 if (call.IsDocumentation()) |
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272 { |
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273 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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274 call.GetDocumentation() |
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275 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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276 .SetSummary("Delete some " + resource) |
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277 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 278 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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279 return; |
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280 } |
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281 |
|
4694
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282 Json::Value remainingAncestor; |
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283 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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284 { |
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285 call.GetOutput().AnswerJson(remainingAncestor); |
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286 } |
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287 } |
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288 |
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289 |
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290 // Get information about a single patient ----------------------------------- |
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291 |
| 974 | 292 static void IsProtectedPatient(RestApiGetCall& call) |
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293 { |
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294 if (call.IsDocumentation()) |
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295 { |
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296 call.GetDocumentation() |
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297 .SetTag("Patients") |
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298 .SetSummary("Is the patient protected against recycling?") |
| 4404 | 299 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
| 4403 | 300 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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301 return; |
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302 } |
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303 |
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304 std::string publicId = call.GetUriComponent("id", ""); |
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305 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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306 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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307 } |
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308 |
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309 |
| 974 | 310 static void SetPatientProtection(RestApiPutCall& call) |
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311 { |
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312 if (call.IsDocumentation()) |
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313 { |
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314 call.GetDocumentation() |
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315 .SetTag("Patients") |
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316 .SetSummary("Protect one patient against recycling") |
| 4403 | 317 .SetDescription("Check out configuration options `MaximumStorageSize` and `MaximumPatientCount`") |
| 4404 | 318 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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319 return; |
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320 } |
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321 |
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322 ServerContext& context = OrthancRestApi::GetContext(call); |
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323 |
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324 std::string publicId = call.GetUriComponent("id", ""); |
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325 |
|
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326 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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327 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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328 } |
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329 |
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330 |
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331 // Get information about a single instance ---------------------------------- |
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332 |
| 974 | 333 static void GetInstanceFile(RestApiGetCall& call) |
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334 { |
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335 if (call.IsDocumentation()) |
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336 { |
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337 call.GetDocumentation() |
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338 .SetTag("Instances") |
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339 .SetSummary("Download DICOM") |
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340 .SetDescription("Download one DICOM instance") |
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341 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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342 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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343 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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344 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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345 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
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346 return; |
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347 } |
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348 |
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349 ServerContext& context = OrthancRestApi::GetContext(call); |
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350 |
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351 std::string publicId = call.GetUriComponent("id", ""); |
|
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352 |
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353 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
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354 if (accept != call.GetHttpHeaders().end()) |
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355 { |
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356 // New in Orthanc 1.5.4 |
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357 try |
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358 { |
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359 MimeType mime = StringToMimeType(accept->second.c_str()); |
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360 |
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361 if (mime == MimeType_DicomWebJson || |
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362 mime == MimeType_DicomWebXml) |
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363 { |
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364 DicomWebJsonVisitor visitor; |
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365 |
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366 { |
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367 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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368 locker.GetDicom().Apply(visitor); |
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369 } |
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370 |
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371 if (mime == MimeType_DicomWebJson) |
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372 { |
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373 std::string s = visitor.GetResult().toStyledString(); |
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374 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
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375 } |
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376 else |
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377 { |
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378 std::string xml; |
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379 visitor.FormatXml(xml); |
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380 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
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381 } |
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382 |
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383 return; |
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384 } |
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385 } |
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386 catch (OrthancException&) |
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387 { |
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388 } |
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389 } |
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390 |
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391 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
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392 } |
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393 |
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394 |
| 974 | 395 static void ExportInstanceFile(RestApiPostCall& call) |
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396 { |
| 4421 | 397 if (call.IsDocumentation()) |
| 398 { | |
| 399 call.GetDocumentation() | |
| 400 .SetTag("Instances") | |
| 401 .SetSummary("Write DICOM onto filesystem") | |
| 402 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running") | |
| 403 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 404 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
| 405 return; | |
| 406 } | |
| 407 | |
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408 ServerContext& context = OrthancRestApi::GetContext(call); |
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409 |
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410 std::string publicId = call.GetUriComponent("id", ""); |
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411 |
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412 std::string dicom; |
| 2124 | 413 context.ReadDicom(dicom, publicId); |
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414 |
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415 std::string target; |
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416 call.BodyToString(target); |
| 2140 | 417 SystemToolbox::WriteFile(dicom, target); |
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418 |
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419 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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420 } |
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421 |
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422 |
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423 template <DicomToJsonFormat format> |
| 974 | 424 static void GetInstanceTags(RestApiGetCall& call) |
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425 { |
| 4404 | 426 if (call.IsDocumentation()) |
| 427 { | |
| 428 if (format == DicomToJsonFormat_Human) | |
| 429 { | |
| 430 call.GetDocumentation() | |
| 431 .SetTag("Instances") | |
| 432 .SetSummary("Get human-readable tags") | |
| 433 .SetDescription("Get the DICOM tags in human-readable format") | |
| 434 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
|
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435 .SetHttpGetArgument("ignore-length", RestApiCallDocumentation::Type_JsonListOfStrings, |
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436 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
| 4404 | 437 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
| 4415 | 438 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
| 4404 | 439 return; |
| 440 } | |
| 441 else | |
| 442 { | |
| 443 throw OrthancException(ErrorCode_NotImplemented); | |
| 444 } | |
| 445 } | |
| 446 | |
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447 ServerContext& context = OrthancRestApi::GetContext(call); |
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448 |
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449 std::string publicId = call.GetUriComponent("id", ""); |
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450 |
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451 std::set<DicomTag> ignoreTagLength; |
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452 ParseSetOfTags(ignoreTagLength, call, "ignore-length"); |
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453 |
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454 if (format != DicomToJsonFormat_Full || |
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455 !ignoreTagLength.empty()) |
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456 { |
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457 Json::Value full; |
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458 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
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459 AnswerDicomAsJson(call, full, format); |
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460 } |
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461 else |
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462 { |
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463 // This path allows one to avoid the JSON decoding if no |
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464 // simplification is asked, and if no "ignore-length" argument |
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465 // is present |
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466 Json::Value full; |
| 2127 | 467 context.ReadDicomAsJson(full, publicId); |
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468 call.GetOutput().AnswerJson(full); |
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469 } |
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470 } |
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471 |
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472 |
| 974 | 473 static void GetInstanceTagsBis(RestApiGetCall& call) |
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474 { |
| 4404 | 475 if (call.IsDocumentation()) |
| 476 { | |
| 477 call.GetDocumentation() | |
| 478 .SetTag("Instances") | |
| 479 .SetSummary("Get DICOM tags") | |
| 480 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
| 481 "combines hexadecimal tags with human-readable description.") | |
| 482 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 483 .SetHttpGetArgument("simplify", RestApiCallDocumentation::Type_String, | |
| 484 "If present, report the DICOM tags in human-readable format " | |
| 485 "(same as the `/instances/{id}/simplified-tags` route)", false) | |
| 486 .SetHttpGetArgument("short", RestApiCallDocumentation::Type_String, | |
| 487 "If present, report the DICOM tags indexed in hexadecimal format", false) | |
| 488 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
| 4415 | 489 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
| 4404 | 490 return; |
| 491 } | |
| 492 | |
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493 switch (GetDicomFormat(call)) |
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494 { |
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495 case DicomToJsonFormat_Human: |
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496 GetInstanceTags<DicomToJsonFormat_Human>(call); |
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497 break; |
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498 |
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499 case DicomToJsonFormat_Short: |
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500 GetInstanceTags<DicomToJsonFormat_Short>(call); |
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501 break; |
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502 |
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503 case DicomToJsonFormat_Full: |
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504 GetInstanceTags<DicomToJsonFormat_Full>(call); |
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505 break; |
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506 |
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507 default: |
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508 throw OrthancException(ErrorCode_InternalError); |
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509 } |
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510 } |
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511 |
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512 |
| 974 | 513 static void ListFrames(RestApiGetCall& call) |
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514 { |
| 4414 | 515 if (call.IsDocumentation()) |
| 516 { | |
| 517 call.GetDocumentation() | |
| 518 .SetTag("Instances") | |
| 519 .SetSummary("List available frames") | |
| 520 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
| 521 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 522 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
| 523 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); | |
| 524 return; | |
| 525 } | |
| 526 | |
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527 std::string publicId = call.GetUriComponent("id", ""); |
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528 |
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529 unsigned int numberOfFrames; |
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530 |
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531 { |
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532 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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533 numberOfFrames = locker.GetDicom().GetFramesCount(); |
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534 } |
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535 |
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536 Json::Value result = Json::arrayValue; |
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537 for (unsigned int i = 0; i < numberOfFrames; i++) |
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538 { |
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539 result.append(i); |
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540 } |
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541 |
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542 call.GetOutput().AnswerJson(result); |
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543 } |
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544 |
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545 |
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546 namespace |
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547 { |
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548 class ImageToEncode |
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549 { |
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550 private: |
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551 std::unique_ptr<ImageAccessor>& image_; |
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552 ImageExtractionMode mode_; |
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553 bool invert_; |
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554 MimeType format_; |
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555 std::string answer_; |
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556 |
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557 public: |
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558 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
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559 ImageExtractionMode mode, |
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560 bool invert) : |
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561 image_(image), |
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562 mode_(mode), |
| 4205 | 563 invert_(invert), |
| 564 format_(MimeType_Binary) | |
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565 { |
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566 } |
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567 |
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568 void Answer(RestApiOutput& output) |
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569 { |
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570 output.AnswerBuffer(answer_, format_); |
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571 } |
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572 |
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573 void EncodeUsingPng() |
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574 { |
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575 format_ = MimeType_Png; |
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576 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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577 } |
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578 |
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579 void EncodeUsingPam() |
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580 { |
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581 format_ = MimeType_Pam; |
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582 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
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583 } |
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584 |
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585 void EncodeUsingJpeg(uint8_t quality) |
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586 { |
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587 format_ = MimeType_Jpeg; |
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588 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
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589 } |
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590 }; |
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591 |
|
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592 class EncodePng : public HttpContentNegociation::IHandler |
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593 { |
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594 private: |
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595 ImageToEncode& image_; |
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596 |
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597 public: |
| 4205 | 598 explicit EncodePng(ImageToEncode& image) : image_(image) |
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599 { |
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600 } |
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601 |
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602 virtual void Handle(const std::string& type, |
| 4205 | 603 const std::string& subtype) ORTHANC_OVERRIDE |
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604 { |
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605 assert(type == "image"); |
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606 assert(subtype == "png"); |
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607 image_.EncodeUsingPng(); |
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608 } |
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609 }; |
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610 |
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611 class EncodePam : public HttpContentNegociation::IHandler |
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612 { |
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613 private: |
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614 ImageToEncode& image_; |
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615 |
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616 public: |
| 4205 | 617 explicit EncodePam(ImageToEncode& image) : image_(image) |
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618 { |
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619 } |
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620 |
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621 virtual void Handle(const std::string& type, |
| 4205 | 622 const std::string& subtype) ORTHANC_OVERRIDE |
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623 { |
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624 assert(type == "image"); |
| 2780 | 625 assert(subtype == "x-portable-arbitrarymap"); |
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626 image_.EncodeUsingPam(); |
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627 } |
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628 }; |
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629 |
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630 class EncodeJpeg : public HttpContentNegociation::IHandler |
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631 { |
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632 private: |
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633 ImageToEncode& image_; |
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634 unsigned int quality_; |
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635 |
|
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636 public: |
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637 EncodeJpeg(ImageToEncode& image, |
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638 const RestApiGetCall& call) : |
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639 image_(image) |
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640 { |
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641 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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642 bool ok = false; |
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643 |
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644 try |
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645 { |
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646 quality_ = boost::lexical_cast<unsigned int>(v); |
| 1847 | 647 ok = (quality_ >= 1 && quality_ <= 100); |
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648 } |
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649 catch (boost::bad_lexical_cast&) |
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650 { |
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651 } |
|
2dbf25006f88
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diff
changeset
|
652 |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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|
653 if (!ok) |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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changeset
|
654 { |
| 2955 | 655 throw OrthancException( |
| 656 ErrorCode_BadRequest, | |
| 657 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
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|
658 } |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
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|
659 } |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
changeset
|
660 |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
changeset
|
661 virtual void Handle(const std::string& type, |
| 4205 | 662 const std::string& subtype) ORTHANC_OVERRIDE |
|
1784
2dbf25006f88
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diff
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|
663 { |
|
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diff
changeset
|
664 assert(type == "image"); |
|
2dbf25006f88
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diff
changeset
|
665 assert(subtype == "jpeg"); |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
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|
666 image_.EncodeUsingJpeg(quality_); |
|
1784
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diff
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|
667 } |
|
2dbf25006f88
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diff
changeset
|
668 }; |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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parents:
1773
diff
changeset
|
669 } |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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1773
diff
changeset
|
670 |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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diff
changeset
|
671 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
672 namespace |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
673 { |
|
3683
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skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
674 class IDecodedFrameHandler : public boost::noncopyable |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
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|
675 { |
|
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skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
676 public: |
|
12253ddefe5a
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diff
changeset
|
677 virtual ~IDecodedFrameHandler() |
|
12253ddefe5a
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diff
changeset
|
678 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
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|
679 } |
|
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diff
changeset
|
680 |
|
12253ddefe5a
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3640
diff
changeset
|
681 virtual void Handle(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
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3690
diff
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|
682 std::unique_ptr<ImageAccessor>& decoded, |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
683 const DicomMap& dicom) = 0; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
684 |
|
12253ddefe5a
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3640
diff
changeset
|
685 virtual bool RequiresDicomTags() const = 0; |
|
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skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
686 |
|
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diff
changeset
|
687 static void Apply(RestApiGetCall& call, |
|
4406
4cb9f66a1c7c
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|
688 IDecodedFrameHandler& handler, |
|
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|
689 ImageExtractionMode mode /* for generation of documentation */, |
|
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|
690 bool isRendered /* for generation of documentation */) |
|
3683
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diff
changeset
|
691 { |
|
4406
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diff
changeset
|
692 if (call.IsDocumentation()) |
|
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diff
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|
693 { |
|
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diff
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|
694 std::string m; |
|
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|
695 if (!isRendered) |
|
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|
696 { |
|
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|
697 switch (mode) |
|
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diff
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|
698 { |
|
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diff
changeset
|
699 case ImageExtractionMode_Preview: |
|
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|
700 m = "preview"; |
|
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changeset
|
701 break; |
|
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diff
changeset
|
702 case ImageExtractionMode_UInt8: |
|
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|
703 m = "uint8"; |
|
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diff
changeset
|
704 break; |
|
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diff
changeset
|
705 case ImageExtractionMode_UInt16: |
|
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diff
changeset
|
706 m = "uint16"; |
|
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parents:
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diff
changeset
|
707 break; |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
708 case ImageExtractionMode_Int16: |
|
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documenting generation of images
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diff
changeset
|
709 m = "int16"; |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
710 break; |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
711 default: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
712 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
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parents:
4405
diff
changeset
|
713 } |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
714 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
715 |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
716 std::string description; |
|
4cb9f66a1c7c
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diff
changeset
|
717 std::string verb = (isRendered ? "Render" : "Decode"); |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
718 |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
719 if (call.HasUriComponent("frame")) |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
720 { |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
721 description = verb + " one frame of interest from the given DICOM instance."; |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
722 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
723 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
724 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
725 } |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
726 else |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
727 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
728 description = verb + " the first frame of the given DICOM instance."; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
729 call.GetDocumentation() |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
730 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
731 } |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
732 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
733 if (isRendered) |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
734 { |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
735 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
736 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
737 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
738 call.GetDocumentation() |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
739 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
740 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
|
4cb9f66a1c7c
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diff
changeset
|
741 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
|
4cb9f66a1c7c
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diff
changeset
|
742 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
743 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
744 } |
|
4cb9f66a1c7c
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diff
changeset
|
745 else |
|
4cb9f66a1c7c
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diff
changeset
|
746 { |
|
4cb9f66a1c7c
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diff
changeset
|
747 switch (mode) |
|
4cb9f66a1c7c
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diff
changeset
|
748 { |
|
4cb9f66a1c7c
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diff
changeset
|
749 case ImageExtractionMode_Preview: |
|
4cb9f66a1c7c
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diff
changeset
|
750 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
751 break; |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
752 case ImageExtractionMode_UInt8: |
|
4cb9f66a1c7c
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diff
changeset
|
753 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
754 break; |
|
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
755 case ImageExtractionMode_UInt16: |
|
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
756 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
757 break; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
758 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
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4405
diff
changeset
|
759 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
|
4cb9f66a1c7c
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diff
changeset
|
760 "Negative values must be interpreted according to two's complement."); |
|
4cb9f66a1c7c
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changeset
|
761 break; |
|
4cb9f66a1c7c
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diff
changeset
|
762 default: |
|
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|
763 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
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diff
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|
764 } |
|
4cb9f66a1c7c
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diff
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|
765 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
766 |
|
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diff
changeset
|
767 call.GetDocumentation() |
|
4cb9f66a1c7c
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|
768 .SetTag("Instances") |
|
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|
769 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
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|
770 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
|
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parents:
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771 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
|
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parents:
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diff
changeset
|
772 .AddAnswerType(MimeType_Png, "PNG image") |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
773 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
774 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
|
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parents:
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changeset
|
775 .SetDescription(description); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
776 |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
777 return; |
|
4cb9f66a1c7c
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|
778 } |
|
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parents:
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diff
changeset
|
779 |
|
3683
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|
780 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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changeset
|
781 |
|
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diff
changeset
|
782 std::string frameId = call.GetUriComponent("frame", "0"); |
|
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changeset
|
783 |
|
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skeleton for new route: /instances/{id}/rendered
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changeset
|
784 unsigned int frame; |
|
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skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
785 try |
|
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parents:
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diff
changeset
|
786 { |
|
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diff
changeset
|
787 frame = boost::lexical_cast<unsigned int>(frameId); |
|
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diff
changeset
|
788 } |
|
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diff
changeset
|
789 catch (boost::bad_lexical_cast&) |
|
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|
790 { |
|
12253ddefe5a
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diff
changeset
|
791 return; |
|
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skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
792 } |
|
12253ddefe5a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
793 |
|
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diff
changeset
|
794 DicomMap dicom; |
|
3712
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replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
795 std::unique_ptr<ImageAccessor> decoded; |
|
3683
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skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
796 |
|
12253ddefe5a
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parents:
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diff
changeset
|
797 try |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
798 { |
|
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parents:
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diff
changeset
|
799 std::string publicId = call.GetUriComponent("id", ""); |
|
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parents:
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diff
changeset
|
800 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
801 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
|
3683
12253ddefe5a
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parents:
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diff
changeset
|
802 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
803 if (decoded.get() == NULL) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
804 { |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
805 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
806 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
807 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
808 |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
809 if (handler.RequiresDicomTags()) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
810 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
811 /** |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
812 * Retrieve a summary of the DICOM tags, which is |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
813 * necessary to deal with MONOCHROME1 photometric |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
814 * interpretation, and with windowing parameters. |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
815 **/ |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
816 ServerContext::DicomCacheLocker locker(context, publicId); |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
817 OrthancConfiguration::DefaultExtractDicomSummary(dicom, locker.GetDicom()); |
|
3683
12253ddefe5a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
818 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
819 } |
|
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skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
820 catch (OrthancException& e) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
821 { |
|
12253ddefe5a
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parents:
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diff
changeset
|
822 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
|
12253ddefe5a
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parents:
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diff
changeset
|
823 e.GetErrorCode() == ErrorCode_UnknownResource) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
824 { |
|
12253ddefe5a
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parents:
3640
diff
changeset
|
825 // The frame number is out of the range for this DICOM |
|
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
826 // instance, the resource is not existent |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
827 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
828 else |
|
12253ddefe5a
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parents:
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diff
changeset
|
829 { |
|
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skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
830 std::string root = ""; |
|
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parents:
3640
diff
changeset
|
831 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
832 { |
|
12253ddefe5a
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parents:
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diff
changeset
|
833 root += "../"; |
|
12253ddefe5a
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diff
changeset
|
834 } |
|
12253ddefe5a
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parents:
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diff
changeset
|
835 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
836 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
837 } |
|
12253ddefe5a
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parents:
3640
diff
changeset
|
838 return; |
|
12253ddefe5a
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parents:
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diff
changeset
|
839 } |
|
12253ddefe5a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
840 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
841 handler.Handle(call, decoded, dicom); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
842 } |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
843 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
844 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
845 static void DefaultHandler(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
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parents:
3690
diff
changeset
|
846 std::unique_ptr<ImageAccessor>& decoded, |
|
3685
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
847 ImageExtractionMode mode, |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
848 bool invert) |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
849 { |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
850 ImageToEncode image(decoded, mode, invert); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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3683
diff
changeset
|
851 |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
852 HttpContentNegociation negociation; |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
853 EncodePng png(image); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
854 negociation.Register(MIME_PNG, png); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
855 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
856 EncodeJpeg jpeg(image, call); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
857 negociation.Register(MIME_JPEG, jpeg); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
858 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
859 EncodePam pam(image); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
860 negociation.Register(MIME_PAM, pam); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
861 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
862 if (negociation.Apply(call.GetHttpHeaders())) |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
863 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
864 image.Answer(call.GetOutput()); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
865 } |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
866 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
867 }; |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
868 |
|
4066998150ef
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Alain Mazy <alain@mazy.be>
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869 |
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870 class GetImageHandler : public IDecodedFrameHandler |
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871 { |
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872 private: |
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873 ImageExtractionMode mode_; |
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874 |
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875 public: |
| 4205 | 876 explicit GetImageHandler(ImageExtractionMode mode) : |
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877 mode_(mode) |
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878 { |
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879 } |
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880 |
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881 virtual void Handle(RestApiGetCall& call, |
|
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882 std::unique_ptr<ImageAccessor>& decoded, |
|
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883 const DicomMap& dicom) ORTHANC_OVERRIDE |
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884 { |
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885 bool invert = false; |
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886 |
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887 if (mode_ == ImageExtractionMode_Preview) |
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888 { |
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889 DicomImageInformation info(dicom); |
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890 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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891 } |
|
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892 |
|
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893 DefaultHandler(call, decoded, mode_, invert); |
|
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894 } |
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895 |
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896 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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897 { |
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898 return mode_ == ImageExtractionMode_Preview; |
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899 } |
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900 }; |
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901 |
|
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|
902 |
|
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903 class RenderedFrameHandler : public IDecodedFrameHandler |
|
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904 { |
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905 private: |
|
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906 static void GetDicomParameters(bool& invert, |
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907 float& rescaleSlope, |
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908 float& rescaleIntercept, |
|
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909 float& windowWidth, |
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910 float& windowCenter, |
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|
911 const DicomMap& dicom) |
|
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912 { |
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|
913 DicomImageInformation info(dicom); |
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914 |
|
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915 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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916 |
|
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917 rescaleSlope = 1.0f; |
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918 rescaleIntercept = 0.0f; |
|
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919 |
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920 if (dicom.HasTag(Orthanc::DICOM_TAG_RESCALE_SLOPE) && |
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921 dicom.HasTag(Orthanc::DICOM_TAG_RESCALE_INTERCEPT)) |
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|
922 { |
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923 dicom.ParseFloat(rescaleSlope, Orthanc::DICOM_TAG_RESCALE_SLOPE); |
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924 dicom.ParseFloat(rescaleIntercept, Orthanc::DICOM_TAG_RESCALE_INTERCEPT); |
|
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925 } |
|
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|
926 |
|
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927 windowWidth = static_cast<float>(1 << info.GetBitsStored()) * rescaleSlope; |
|
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|
928 windowCenter = windowWidth / 2.0f + rescaleIntercept; |
|
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|
929 |
|
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|
930 if (dicom.HasTag(Orthanc::DICOM_TAG_WINDOW_CENTER) && |
|
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931 dicom.HasTag(Orthanc::DICOM_TAG_WINDOW_WIDTH)) |
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|
932 { |
|
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|
933 dicom.ParseFirstFloat(windowCenter, Orthanc::DICOM_TAG_WINDOW_CENTER); |
|
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|
934 dicom.ParseFirstFloat(windowWidth, Orthanc::DICOM_TAG_WINDOW_WIDTH); |
|
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|
935 } |
|
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|
936 } |
|
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|
937 |
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|
938 static void GetUserArguments(float& windowWidth /* inout */, |
|
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|
939 float& windowCenter /* inout */, |
|
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|
940 unsigned int& argWidth, |
|
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|
941 unsigned int& argHeight, |
|
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|
942 bool& smooth, |
| 4205 | 943 const RestApiGetCall& call) |
|
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|
944 { |
|
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945 static const char* ARG_WINDOW_CENTER = "window-center"; |
|
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946 static const char* ARG_WINDOW_WIDTH = "window-width"; |
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|
947 static const char* ARG_WIDTH = "width"; |
|
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|
948 static const char* ARG_HEIGHT = "height"; |
|
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|
949 static const char* ARG_SMOOTH = "smooth"; |
|
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|
950 |
|
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|
951 if (call.HasArgument(ARG_WINDOW_WIDTH)) |
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|
952 { |
|
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|
953 try |
|
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|
954 { |
|
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|
955 windowWidth = boost::lexical_cast<float>(call.GetArgument(ARG_WINDOW_WIDTH, "")); |
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|
956 } |
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957 catch (boost::bad_lexical_cast&) |
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958 { |
|
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959 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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|
960 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
|
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|
961 } |
|
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|
962 } |
|
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|
963 |
|
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|
964 if (call.HasArgument(ARG_WINDOW_CENTER)) |
|
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|
965 { |
|
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|
966 try |
|
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|
967 { |
|
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|
968 windowCenter = boost::lexical_cast<float>(call.GetArgument(ARG_WINDOW_CENTER, "")); |
|
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|
969 } |
|
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|
970 catch (boost::bad_lexical_cast&) |
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|
971 { |
|
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changeset
|
972 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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|
973 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
|
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|
974 } |
|
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|
975 } |
|
2cc34837d694
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changeset
|
976 |
|
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|
977 argWidth = 0; |
|
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implementation of "/instances/.../rendered" for grayscale images
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|
978 argHeight = 0; |
|
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|
979 |
|
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
980 if (call.HasArgument(ARG_WIDTH)) |
|
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|
981 { |
|
2cc34837d694
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changeset
|
982 try |
|
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rendering of RGB24
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changeset
|
983 { |
|
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
984 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
|
3685
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rendering of RGB24
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changeset
|
985 if (tmp < 0) |
|
2cc34837d694
rendering of RGB24
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|
986 { |
|
2cc34837d694
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|
987 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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implementation of "/instances/.../rendered" for grayscale images
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|
988 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
|
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|
989 } |
|
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rendering of RGB24
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|
990 else |
|
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rendering of RGB24
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|
991 { |
|
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|
992 argWidth = static_cast<unsigned int>(tmp); |
|
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993 } |
|
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|
994 } |
|
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|
995 catch (boost::bad_lexical_cast&) |
|
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|
996 { |
|
2cc34837d694
rendering of RGB24
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|
997 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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998 "Bad value for argument: " + std::string(ARG_WIDTH)); |
|
3685
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|
999 } |
|
3683
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skeleton for new route: /instances/{id}/rendered
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3640
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|
1000 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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3640
diff
changeset
|
1001 |
|
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1002 if (call.HasArgument(ARG_HEIGHT)) |
|
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|
1003 { |
|
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|
1004 try |
|
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|
1005 { |
|
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|
1006 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
|
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1007 if (tmp < 0) |
|
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|
1008 { |
|
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1009 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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|
1010 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
|
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1011 } |
|
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1012 else |
|
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1013 { |
|
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1014 argHeight = static_cast<unsigned int>(tmp); |
|
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1015 } |
|
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1016 } |
|
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1017 catch (boost::bad_lexical_cast&) |
|
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1018 { |
|
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1019 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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1020 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
|
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1021 } |
|
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1022 } |
|
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|
1023 |
|
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|
1024 smooth = false; |
|
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1025 |
|
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1026 if (call.HasArgument(ARG_SMOOTH)) |
|
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|
1027 { |
|
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
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4460
diff
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|
1028 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
|
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1029 } |
|
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|
1030 } |
|
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|
1031 |
|
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|
1032 |
|
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|
1033 public: |
|
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|
1034 virtual void Handle(RestApiGetCall& call, |
|
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1035 std::unique_ptr<ImageAccessor>& decoded, |
|
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|
1036 const DicomMap& dicom) ORTHANC_OVERRIDE |
|
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1037 { |
|
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|
1038 bool invert; |
|
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1039 float rescaleSlope, rescaleIntercept, windowWidth, windowCenter; |
|
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implementation of "/instances/.../rendered" for grayscale images
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|
1040 GetDicomParameters(invert, rescaleSlope, rescaleIntercept, windowWidth, windowCenter, dicom); |
| 3686 | 1041 |
|
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|
1042 unsigned int argWidth, argHeight; |
|
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|
1043 bool smooth; |
|
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changeset
|
1044 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
|
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|
1045 |
|
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|
1046 unsigned int targetWidth = decoded->GetWidth(); |
|
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|
1047 unsigned int targetHeight = decoded->GetHeight(); |
| 3686 | 1048 |
| 1049 if (decoded->GetWidth() != 0 && | |
| 1050 decoded->GetHeight() != 0) | |
| 1051 { | |
| 1052 float ratio = 1; | |
| 1053 | |
|
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|
1054 if (argWidth != 0 && |
|
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|
1055 argHeight != 0) |
| 3686 | 1056 { |
|
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|
1057 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
|
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|
1058 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
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|
1059 ratio = std::min(ratioX, ratioY); |
| 3686 | 1060 } |
|
3690
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|
1061 else if (argWidth != 0) |
| 3686 | 1062 { |
|
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|
1063 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
| 3686 | 1064 } |
|
3690
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|
1065 else if (argHeight != 0) |
|
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|
1066 { |
|
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|
1067 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
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changeset
|
1068 } |
|
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changeset
|
1069 |
|
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|
1070 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
|
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changeset
|
1071 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
| 3686 | 1072 } |
| 1073 | |
|
3685
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|
1074 if (decoded->GetFormat() == PixelFormat_RGB24) |
|
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|
1075 { |
|
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changeset
|
1076 if (targetWidth == decoded->GetWidth() && |
|
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changeset
|
1077 targetHeight == decoded->GetHeight()) |
|
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|
1078 { |
|
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changeset
|
1079 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
|
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|
1080 } |
|
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|
1081 else |
|
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changeset
|
1082 { |
|
3712
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changeset
|
1083 std::unique_ptr<ImageAccessor> resized( |
|
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changeset
|
1084 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
|
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changeset
|
1085 |
|
3685
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changeset
|
1086 if (smooth && |
|
3690
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changeset
|
1087 (targetWidth < decoded->GetWidth() || |
|
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
1088 targetHeight < decoded->GetHeight())) |
|
3685
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rendering of RGB24
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diff
changeset
|
1089 { |
|
4065
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1090 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
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1091 } |
|
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1092 |
|
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1093 ImageProcessing::Resize(*resized, *decoded); |
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1094 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
|
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1095 } |
|
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1096 } |
| 3686 | 1097 else |
| 1098 { | |
|
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1099 // Grayscale image: (1) convert to Float32, (2) apply |
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1100 // windowing to get a Grayscale8, (3) possibly resize |
|
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1101 |
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1102 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
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1103 ImageProcessing::Convert(converted, *decoded); |
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1104 |
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1105 // Avoid divisions by zero |
|
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1106 if (windowWidth <= 1.0f) |
|
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1107 { |
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1108 windowWidth = 1; |
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1109 } |
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1110 |
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1111 if (std::abs(rescaleSlope) <= 0.1f) |
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1112 { |
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1113 rescaleSlope = 0.1f; |
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1114 } |
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1115 |
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1116 const float scaling = 255.0f * rescaleSlope / windowWidth; |
|
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1117 const float offset = (rescaleIntercept - windowCenter + windowWidth / 2.0f) / rescaleSlope; |
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1118 |
|
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1119 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
|
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1120 ImageProcessing::ShiftScale(*rescaled, converted, offset, scaling, false); |
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1121 |
|
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1122 if (targetWidth == decoded->GetWidth() && |
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1123 targetHeight == decoded->GetHeight()) |
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1124 { |
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1125 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
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1126 } |
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1127 else |
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1128 { |
|
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1129 std::unique_ptr<ImageAccessor> resized( |
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1130 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
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1131 |
|
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1132 if (smooth && |
|
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1133 (targetWidth < decoded->GetWidth() || |
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1134 targetHeight < decoded->GetHeight())) |
|
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|
1135 { |
|
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1136 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
|
3690
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1137 } |
|
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1138 |
|
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1139 ImageProcessing::Resize(*resized, *rescaled); |
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1140 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
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1141 } |
| 3686 | 1142 } |
|
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1143 } |
|
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1144 |
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1145 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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1146 { |
|
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1147 return true; |
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1148 } |
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1149 }; |
|
3600
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1150 } |
|
4066998150ef
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1151 |
|
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1152 |
|
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|
1153 template <enum ImageExtractionMode mode> |
| 974 | 1154 static void GetImage(RestApiGetCall& call) |
|
751
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1155 { |
|
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1156 Semaphore::Locker locker(throttlingSemaphore_); |
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1157 |
|
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1158 GetImageHandler handler(mode); |
|
4406
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1159 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
|
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1160 } |
|
1906
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1161 |
|
1826
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1162 |
|
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1163 static void GetRenderedFrame(RestApiGetCall& call) |
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1164 { |
|
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1165 Semaphore::Locker locker(throttlingSemaphore_); |
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1166 |
|
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|
1167 RenderedFrameHandler handler; |
|
4406
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1168 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
|
751
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|
1169 } |
|
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|
1170 |
|
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1171 |
| 974 | 1172 static void GetMatlabImage(RestApiGetCall& call) |
|
874
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1173 { |
| 4414 | 1174 if (call.IsDocumentation()) |
| 1175 { | |
| 1176 std::string description; | |
| 1177 | |
| 1178 if (call.HasUriComponent("frame")) | |
| 1179 { | |
| 1180 description = "Decode one frame of interest from the given DICOM instance"; | |
| 1181 call.GetDocumentation() | |
| 1182 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
| 1183 } | |
| 1184 else | |
| 1185 { | |
| 1186 description = "Decode the first frame of the given DICOM instance."; | |
| 1187 } | |
| 1188 | |
| 1189 call.GetDocumentation() | |
| 1190 .SetTag("Instances") | |
| 1191 .SetSummary("Decode frame for Matlab") | |
| 1192 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
| 1193 "https://book.orthanc-server.com/faq/matlab.html") | |
| 1194 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 1195 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
| 1196 return; | |
| 1197 } | |
| 1198 | |
|
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|
1199 Semaphore::Locker locker(throttlingSemaphore_); |
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|
1200 |
|
874
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|
1201 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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1202 |
|
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1203 std::string frameId = call.GetUriComponent("frame", "0"); |
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1204 |
|
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|
1205 unsigned int frame; |
|
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1206 try |
|
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1207 { |
|
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1208 frame = boost::lexical_cast<unsigned int>(frameId); |
|
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1209 } |
|
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|
1210 catch (boost::bad_lexical_cast&) |
|
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1211 { |
|
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|
1212 return; |
|
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1213 } |
|
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1214 |
|
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|
1215 std::string publicId = call.GetUriComponent("id", ""); |
|
3928
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|
1216 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
|
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1217 |
|
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1218 if (decoded.get() == NULL) |
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1219 { |
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1220 throw OrthancException(ErrorCode_NotImplemented, |
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1221 "Cannot decode DICOM instance with ID: " + publicId); |
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1222 } |
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1223 else |
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1224 { |
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1225 std::string result; |
|
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1226 decoded->ToMatlabString(result); |
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1227 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
|
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1228 } |
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1229 } |
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1230 |
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1231 |
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1232 template <bool GzipCompression> |
|
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1233 static void GetRawFrame(RestApiGetCall& call) |
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1234 { |
| 4408 | 1235 if (call.IsDocumentation()) |
| 1236 { | |
| 1237 call.GetDocumentation() | |
| 1238 .SetTag("Instances") | |
| 1239 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
| 1240 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
| 1241 "bypassing image decoding. This is notably useful to access the source files " | |
| 1242 "in compressed transfer syntaxes." + | |
| 1243 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
|
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1244 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
| 4408 | 1245 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
| 1246 | |
| 1247 if (GzipCompression) | |
| 1248 { | |
| 1249 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
| 1250 } | |
| 1251 else | |
| 1252 { | |
| 1253 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
| 1254 } | |
| 1255 return; | |
| 1256 } | |
| 1257 | |
|
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1258 std::string frameId = call.GetUriComponent("frame", "0"); |
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1259 |
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1260 unsigned int frame; |
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1261 try |
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1262 { |
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1263 frame = boost::lexical_cast<unsigned int>(frameId); |
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1264 } |
|
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1265 catch (boost::bad_lexical_cast&) |
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1266 { |
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1267 return; |
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1268 } |
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1269 |
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1270 std::string publicId = call.GetUriComponent("id", ""); |
|
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1271 std::string raw; |
|
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1272 MimeType mime; |
|
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1273 |
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1274 { |
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1275 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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1276 locker.GetDicom().GetRawFrame(raw, mime, frame); |
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1277 } |
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1278 |
|
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1279 if (GzipCompression) |
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1280 { |
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1281 GzipCompressor gzip; |
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1282 std::string compressed; |
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1283 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
|
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1284 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
|
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1285 } |
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1286 else |
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1287 { |
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1288 call.GetOutput().AnswerBuffer(raw, mime); |
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1289 } |
|
1924
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1290 } |
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1291 |
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1292 |
| 974 | 1293 static void GetResourceStatistics(RestApiGetCall& call) |
|
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1294 { |
| 4418 | 1295 if (call.IsDocumentation()) |
| 1296 { | |
| 1297 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1298 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1299 call.GetDocumentation() | |
| 1300 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1301 .SetSummary("Get " + r + " statistics") | |
| 1302 .SetDescription("Get statistics about the given " + r) | |
| 1303 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1304 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
| 1305 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1306 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1307 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
| 1308 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1309 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1310 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1311 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
| 1312 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
| 1313 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
| 1314 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1315 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1316 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1317 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1318 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1319 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1320 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1321 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
| 1322 | |
| 1323 switch (t) | |
| 1324 { | |
| 1325 // Do NOT add "break" below this point! | |
| 1326 case ResourceType_Patient: | |
| 1327 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
| 1328 "Number of child studies within this " + r); | |
| 1329 | |
| 1330 case ResourceType_Study: | |
| 1331 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
| 1332 "Number of child series within this " + r); | |
| 1333 | |
| 1334 case ResourceType_Series: | |
| 1335 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
| 1336 "Number of child instances within this " + r); | |
| 1337 | |
| 1338 case ResourceType_Instance: | |
| 1339 default: | |
| 1340 break; | |
| 1341 } | |
| 1342 | |
| 1343 return; | |
| 1344 } | |
| 1345 | |
|
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1346 static const uint64_t MEGA_BYTES = 1024 * 1024; |
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1347 |
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1348 std::string publicId = call.GetUriComponent("id", ""); |
|
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1349 |
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1350 ResourceType type; |
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1351 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
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1352 unsigned int countStudies, countSeries, countInstances; |
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1353 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
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1354 type, diskSize, uncompressedSize, countStudies, countSeries, |
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1355 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
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1356 |
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1357 Json::Value result = Json::objectValue; |
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1358 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1359 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1360 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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1361 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
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1362 |
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1363 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
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1364 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1365 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
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1366 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
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1367 |
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1368 switch (type) |
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1369 { |
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1370 // Do NOT add "break" below this point! |
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1371 case ResourceType_Patient: |
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1372 result["CountStudies"] = countStudies; |
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1373 |
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1374 case ResourceType_Study: |
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1375 result["CountSeries"] = countSeries; |
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1376 |
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1377 case ResourceType_Series: |
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1378 result["CountInstances"] = countInstances; |
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1379 |
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1380 case ResourceType_Instance: |
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1381 default: |
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1382 break; |
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1383 } |
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1384 |
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1385 call.GetOutput().AnswerJson(result); |
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1386 } |
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1387 |
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1388 |
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1389 |
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1390 // Handling of metadata ----------------------------------------------------- |
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1391 |
| 4205 | 1392 static void CheckValidResourceType(const RestApiCall& call) |
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1393 { |
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1394 assert(!call.GetFullUri().empty()); |
| 4409 | 1395 const std::string resourceType = call.GetFullUri() [0]; |
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1396 StringToResourceType(resourceType.c_str()); |
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1397 } |
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1398 |
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1399 |
| 974 | 1400 static void ListMetadata(RestApiGetCall& call) |
|
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1401 { |
| 4414 | 1402 if (call.IsDocumentation()) |
| 1403 { | |
| 1404 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1405 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1406 call.GetDocumentation() | |
| 1407 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1408 .SetSummary("List metadata") | |
| 1409 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
| 1410 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1411 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
| 1412 "If present, also retrieve the value of the individual metadata", false) | |
| 1413 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " | |
| 1414 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
| 1415 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
| 1416 return; | |
| 1417 } | |
| 1418 | |
|
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1419 assert(!call.GetFullUri().empty()); |
| 4554 | 1420 const std::string publicId = call.GetUriComponent("id", ""); |
| 1421 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
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1422 |
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1423 typedef std::map<MetadataType, std::string> Metadata; |
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1424 |
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1425 Metadata metadata; |
| 4554 | 1426 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
|
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1427 |
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1428 Json::Value result; |
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1429 |
|
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1430 if (call.HasArgument("expand")) |
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1431 { |
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1432 result = Json::objectValue; |
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1433 |
|
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1434 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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1435 { |
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1436 std::string key = EnumerationToString(it->first); |
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1437 result[key] = it->second; |
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1438 } |
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1439 } |
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1440 else |
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1441 { |
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1442 result = Json::arrayValue; |
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1443 |
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1444 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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1445 { |
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1446 result.append(EnumerationToString(it->first)); |
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1447 } |
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1448 } |
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1449 |
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1450 call.GetOutput().AnswerJson(result); |
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1451 } |
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1452 |
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1453 |
| 4657 | 1454 static void SetStringContentETag(const RestApiOutput& output, |
| 1455 int64_t revision, | |
| 1456 const std::string& value) | |
|
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1457 { |
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1458 std::string md5; |
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1459 Toolbox::ComputeMD5(md5, value); |
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1460 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1461 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1462 } |
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1463 |
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1464 |
| 4657 | 1465 static void SetBufferContentETag(const RestApiOutput& output, |
|
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1466 int64_t revision, |
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1467 const void* data, |
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1468 size_t size) |
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1469 { |
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1470 std::string md5; |
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1471 Toolbox::ComputeMD5(md5, data, size); |
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1472 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1473 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1474 } |
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1475 |
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1476 |
| 4657 | 1477 static void SetAttachmentETag(const RestApiOutput& output, |
|
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1478 int64_t revision, |
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1479 const FileInfo& info) |
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1480 { |
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1481 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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1482 info.GetUncompressedMD5() + "\""); |
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1483 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1484 } |
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1485 |
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1486 |
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1487 static std::string GetMD5(const std::string& value) |
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1488 { |
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1489 std::string md5; |
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1490 Toolbox::ComputeMD5(md5, value); |
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1491 return md5; |
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1492 } |
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1493 |
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1494 |
|
4623
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|
1495 static bool GetRevisionHeader(int64_t& revision /* out */, |
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1496 std::string& md5 /* out */, |
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1497 const RestApiCall& call, |
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1498 const std::string& header) |
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1499 { |
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1500 std::string lower; |
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1501 Toolbox::ToLowerCase(lower, header); |
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1502 |
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1503 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1504 if (found == call.GetHttpHeaders().end()) |
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1505 { |
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1506 return false; |
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1507 } |
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1508 else |
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1509 { |
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1510 std::string value = Toolbox::StripSpaces(found->second); |
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1511 Toolbox::RemoveSurroundingQuotes(value); |
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1512 |
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1513 try |
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1514 { |
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1515 size_t comma = value.find('-'); |
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1516 if (comma != std::string::npos) |
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1517 { |
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1518 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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1519 md5 = value.substr(comma + 1); |
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1520 return true; |
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1521 } |
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1522 } |
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1523 catch (boost::bad_lexical_cast&) |
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1524 { |
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1525 } |
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1526 |
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1527 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1528 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
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1529 } |
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1530 } |
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1531 |
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1532 |
| 974 | 1533 static void GetMetadata(RestApiGetCall& call) |
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1534 { |
| 4414 | 1535 if (call.IsDocumentation()) |
| 1536 { | |
| 1537 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1538 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1539 call.GetDocumentation() | |
| 1540 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1541 .SetSummary("Get metadata") | |
| 1542 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
| 1543 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1544 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1545 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1546 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1547 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4414 | 1548 return; |
| 1549 } | |
| 1550 | |
|
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1551 assert(!call.GetFullUri().empty()); |
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1552 const std::string publicId = call.GetUriComponent("id", ""); |
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1553 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1554 |
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1555 std::string name = call.GetUriComponent("name", ""); |
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1556 MetadataType metadata = StringToMetadata(name); |
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1557 |
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1558 std::string value; |
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1559 int64_t revision; |
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1560 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1561 { |
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1562 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
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1563 |
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1564 int64_t userRevision; |
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1565 std::string userMD5; |
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1566 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1567 userRevision == revision && |
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1568 userMD5 == GetMD5(value)) |
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1569 { |
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1570 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1571 } |
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1572 else |
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1573 { |
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1574 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1575 } |
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1576 } |
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1577 } |
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1578 |
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1579 |
| 974 | 1580 static void DeleteMetadata(RestApiDeleteCall& call) |
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1581 { |
| 4414 | 1582 if (call.IsDocumentation()) |
| 1583 { | |
| 1584 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1585 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1586 call.GetDocumentation() | |
| 1587 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1588 .SetSummary("Delete metadata") | |
| 1589 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
| 1590 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
| 1591 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
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1592 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
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1593 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
|
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1594 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4414 | 1595 return; |
| 1596 } | |
| 1597 | |
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1598 CheckValidResourceType(call); |
|
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1599 const std::string publicId = call.GetUriComponent("id", ""); |
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1600 |
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1601 std::string name = call.GetUriComponent("name", ""); |
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1602 MetadataType metadata = StringToMetadata(name); |
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1603 |
|
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1604 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
|
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1605 { |
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1606 bool found; |
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1607 int64_t revision; |
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1608 std::string md5; |
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1609 if (GetRevisionHeader(revision, md5, call, "if-match")) |
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1610 { |
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1611 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
|
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1612 } |
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1613 else |
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1614 { |
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1615 OrthancConfiguration::ReaderLock lock; |
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1616 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1617 { |
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1618 throw OrthancException(ErrorCode_Revision, |
|
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1619 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
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1620 } |
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1621 else |
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|
1622 { |
|
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1623 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
|
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1624 } |
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1625 } |
|
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|
1626 |
|
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1627 if (found) |
|
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1628 { |
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1629 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1630 } |
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1631 else |
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1632 { |
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1633 throw OrthancException(ErrorCode_UnknownResource); |
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1634 } |
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1635 } |
|
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1636 else |
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1637 { |
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1638 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1639 } |
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1640 } |
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1641 |
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1642 |
| 974 | 1643 static void SetMetadata(RestApiPutCall& call) |
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1644 { |
| 4414 | 1645 if (call.IsDocumentation()) |
| 1646 { | |
| 1647 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1648 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1649 call.GetDocumentation() | |
| 1650 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1651 .SetSummary("Set metadata") | |
| 1652 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
| 1653 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
| 1654 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1655 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
|
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1656 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
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1657 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
| 4414 | 1658 return; |
| 1659 } | |
| 1660 | |
|
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1661 CheckValidResourceType(call); |
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1662 |
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1663 std::string publicId = call.GetUriComponent("id", ""); |
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1664 std::string name = call.GetUriComponent("name", ""); |
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1665 MetadataType metadata = StringToMetadata(name); |
|
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1666 |
|
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1667 std::string value; |
|
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1668 call.BodyToString(value); |
|
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1669 |
|
1773
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|
1670 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
|
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1671 { |
|
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1672 int64_t oldRevision; |
|
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1673 std::string oldMD5; |
|
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1674 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
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1675 |
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1676 if (!hasOldRevision) |
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1677 { |
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1678 OrthancConfiguration::ReaderLock lock; |
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1679 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1680 { |
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1681 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
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1682 // the actual value of "oldRevision" if the metadata is |
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1683 // inexistent as expected |
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1684 hasOldRevision = true; |
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1685 oldRevision = -1; // dummy value |
|
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1686 oldMD5.clear(); // dummy value |
|
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1687 } |
|
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1688 } |
|
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1689 |
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1690 int64_t newRevision; |
|
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|
1691 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
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1692 hasOldRevision, oldRevision, oldMD5); |
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1693 |
|
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|
1694 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
|
2908
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|
1695 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1696 } |
|
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1697 else |
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1698 { |
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1699 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1700 } |
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1701 } |
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1702 |
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1703 |
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1704 |
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|
1705 |
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1706 // Handling of attached files ----------------------------------------------- |
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1707 |
| 974 | 1708 static void ListAttachments(RestApiGetCall& call) |
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1709 { |
| 4409 | 1710 if (call.IsDocumentation()) |
| 1711 { | |
| 1712 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1713 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1714 call.GetDocumentation() | |
| 1715 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1716 .SetSummary("List attachments") | |
| 1717 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
| 1718 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1719 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") | |
| 1720 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
| 1721 return; | |
| 1722 } | |
| 1723 | |
| 1724 const std::string resourceType = call.GetFullUri() [0]; | |
| 1725 const std::string publicId = call.GetUriComponent("id", ""); | |
|
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|
1726 std::set<FileContentType> attachments; |
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1727 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
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1728 |
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1729 Json::Value result = Json::arrayValue; |
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1730 |
|
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1731 for (std::set<FileContentType>::const_iterator |
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1732 it = attachments.begin(); it != attachments.end(); ++it) |
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1733 { |
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|
1734 result.append(EnumerationToString(*it)); |
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1735 } |
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|
1736 |
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|
1737 call.GetOutput().AnswerJson(result); |
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1738 } |
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|
1739 |
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1740 |
|
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1741 static void AddAttachmentDocumentation(RestApiGetCall& call, |
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1742 const std::string& resourceType) |
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1743 { |
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1744 call.GetDocumentation() |
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1745 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
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1746 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
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1747 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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1748 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
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1749 } |
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1750 |
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1751 |
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|
1752 static bool GetAttachmentInfo(FileInfo& info, |
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1753 RestApiGetCall& call) |
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1754 { |
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1755 CheckValidResourceType(call); |
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1756 |
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1757 const std::string publicId = call.GetUriComponent("id", ""); |
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1758 const std::string name = call.GetUriComponent("name", ""); |
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1759 FileContentType contentType = StringToContentType(name); |
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1760 |
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1761 int64_t revision; |
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1762 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
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1763 { |
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1764 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
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1765 |
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1766 int64_t userRevision; |
|
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1767 std::string userMD5; |
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1768 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1769 revision == userRevision && |
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1770 info.GetUncompressedMD5() == userMD5) |
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1771 { |
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1772 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1773 return false; |
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1774 } |
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1775 else |
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1776 { |
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1777 return true; |
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1778 } |
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1779 } |
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1780 else |
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1781 { |
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1782 throw OrthancException(ErrorCode_UnknownResource); |
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1783 } |
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1784 } |
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1785 |
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1786 |
| 974 | 1787 static void GetAttachmentOperations(RestApiGetCall& call) |
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1788 { |
| 4409 | 1789 if (call.IsDocumentation()) |
| 1790 { | |
| 1791 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1792 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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1793 AddAttachmentDocumentation(call, r); |
| 4409 | 1794 call.GetDocumentation() |
| 1795 .SetTag("Other") | |
| 4414 | 1796 .SetSummary("List operations on attachments") |
| 1797 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
| 4409 | 1798 .AddAnswerType(MimeType_Json, "List of the available operations") |
| 1799 .SetHttpGetSample("https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2/attachments/dicom", true); | |
| 1800 return; | |
| 1801 } | |
| 1802 | |
|
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1803 FileInfo info; |
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1804 if (GetAttachmentInfo(info, call)) |
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1805 { |
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1806 Json::Value operations = Json::arrayValue; |
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1807 |
|
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1808 operations.append("compress"); |
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1809 operations.append("compressed-data"); |
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1810 |
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1811 if (info.GetCompressedMD5() != "") |
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1812 { |
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1813 operations.append("compressed-md5"); |
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1814 } |
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1815 |
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1816 operations.append("compressed-size"); |
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1817 operations.append("data"); |
|
1700
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1818 operations.append("is-compressed"); |
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1819 |
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1820 if (info.GetUncompressedMD5() != "") |
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1821 { |
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1822 operations.append("md5"); |
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1823 } |
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1824 |
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1825 operations.append("size"); |
|
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1826 operations.append("uncompress"); |
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1827 |
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1828 if (info.GetCompressedMD5() != "" && |
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1829 info.GetUncompressedMD5() != "") |
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1830 { |
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1831 operations.append("verify-md5"); |
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1832 } |
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1833 |
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1834 call.GetOutput().AnswerJson(operations); |
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1835 } |
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1836 } |
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1837 |
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1838 |
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1839 template <int uncompress> |
| 974 | 1840 static void GetAttachmentData(RestApiGetCall& call) |
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1841 { |
| 4409 | 1842 if (call.IsDocumentation()) |
| 1843 { | |
| 1844 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1845 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1846 call.GetDocumentation() | |
| 1847 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1848 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
| 1849 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
| 4418 | 1850 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
| 4409 | 1851 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 1852 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
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1853 .AddAnswerType(MimeType_Binary, "The attachment") |
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1854 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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1855 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4409 | 1856 return; |
| 1857 } | |
| 1858 | |
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1859 ServerContext& context = OrthancRestApi::GetContext(call); |
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1860 |
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1861 CheckValidResourceType(call); |
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1862 |
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1863 std::string publicId = call.GetUriComponent("id", ""); |
|
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1864 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
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1865 |
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1866 FileInfo info; |
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1867 if (GetAttachmentInfo(info, call)) |
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1868 { |
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1869 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
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1870 |
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1871 if (uncompress) |
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1872 { |
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1873 context.AnswerAttachment(call.GetOutput(), publicId, type); |
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1874 } |
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1875 else |
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1876 { |
|
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1877 // Return the raw data (possibly compressed), as stored on the filesystem |
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1878 std::string content; |
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1879 int64_t revision; |
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1880 context.ReadAttachment(content, revision, publicId, type, false); |
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1881 |
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1882 int64_t userRevision; |
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1883 std::string userMD5; |
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1884 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1885 revision == userRevision && |
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1886 info.GetUncompressedMD5() == userMD5) |
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1887 { |
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1888 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1889 } |
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1890 else |
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1891 { |
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1892 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
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1893 } |
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1894 } |
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1895 } |
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1896 } |
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1897 |
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1898 |
| 974 | 1899 static void GetAttachmentSize(RestApiGetCall& call) |
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1900 { |
| 4409 | 1901 if (call.IsDocumentation()) |
| 1902 { | |
| 1903 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1904 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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1905 AddAttachmentDocumentation(call, r); |
| 4409 | 1906 call.GetDocumentation() |
| 1907 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1908 .SetSummary("Get size of attachment") | |
| 1909 .SetDescription("Get the size of one attachment associated with the given " + r) | |
| 1910 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
| 1911 return; | |
| 1912 } | |
| 1913 | |
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1914 FileInfo info; |
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1915 if (GetAttachmentInfo(info, call)) |
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1916 { |
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1917 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
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1918 } |
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1919 } |
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1920 |
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1921 |
| 974 | 1922 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
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1923 { |
| 4409 | 1924 if (call.IsDocumentation()) |
| 1925 { | |
| 1926 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1927 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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1928 AddAttachmentDocumentation(call, r); |
| 4409 | 1929 call.GetDocumentation() |
| 1930 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 4410 | 1931 .SetSummary("Get size of attachment on disk") |
| 4409 | 1932 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
| 4413 | 1933 "This is different from `.../size` iff `EnableStorage` is `true`.") |
| 4410 | 1934 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
| 4409 | 1935 return; |
| 1936 } | |
| 1937 | |
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1938 FileInfo info; |
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1939 if (GetAttachmentInfo(info, call)) |
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1940 { |
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1941 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
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1942 } |
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1943 } |
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1944 |
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1945 |
| 974 | 1946 static void GetAttachmentMD5(RestApiGetCall& call) |
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1947 { |
| 4410 | 1948 if (call.IsDocumentation()) |
| 1949 { | |
| 1950 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1951 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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1952 AddAttachmentDocumentation(call, r); |
| 4410 | 1953 call.GetDocumentation() |
| 1954 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1955 .SetSummary("Get MD5 of attachment") | |
| 1956 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
| 1957 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
| 1958 return; | |
| 1959 } | |
| 1960 | |
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1961 FileInfo info; |
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1962 if (GetAttachmentInfo(info, call) && |
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1963 info.GetUncompressedMD5() != "") |
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1964 { |
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1965 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
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1966 } |
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1967 } |
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1968 |
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1969 |
| 974 | 1970 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
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1971 { |
| 4410 | 1972 if (call.IsDocumentation()) |
| 1973 { | |
| 1974 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1975 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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1976 AddAttachmentDocumentation(call, r); |
| 4410 | 1977 call.GetDocumentation() |
| 1978 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1979 .SetSummary("Get MD5 of attachment on disk") | |
| 1980 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
| 4413 | 1981 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
| 4410 | 1982 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
| 1983 return; | |
| 1984 } | |
| 1985 | |
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1986 FileInfo info; |
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1987 if (GetAttachmentInfo(info, call) && |
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1988 info.GetCompressedMD5() != "") |
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1989 { |
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1990 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
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1991 } |
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1992 } |
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1993 |
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1994 |
| 974 | 1995 static void VerifyAttachment(RestApiPostCall& call) |
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1996 { |
| 4410 | 1997 if (call.IsDocumentation()) |
| 1998 { | |
| 1999 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2000 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2001 call.GetDocumentation() | |
| 2002 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2003 .SetSummary("Verify attachment") | |
| 2004 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
| 2005 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2006 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 2007 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
| 2008 return; | |
| 2009 } | |
| 2010 | |
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2011 ServerContext& context = OrthancRestApi::GetContext(call); |
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2012 CheckValidResourceType(call); |
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2013 |
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2014 std::string publicId = call.GetUriComponent("id", ""); |
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2015 std::string name = call.GetUriComponent("name", ""); |
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2016 FileContentType contentType = StringToContentType(name); |
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2017 |
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2018 FileInfo info; |
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2019 int64_t revision; // Ignored |
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2020 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
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2021 info.GetCompressedMD5() == "" || |
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2022 info.GetUncompressedMD5() == "") |
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2023 { |
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2024 // Inexistent resource, or no MD5 available |
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2025 return; |
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2026 } |
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2027 |
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2028 bool ok = false; |
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2029 |
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2030 // First check whether the compressed data is correctly stored in the disk |
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2031 std::string data; |
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2032 context.ReadAttachment(data, revision, publicId, StringToContentType(name), false); |
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2033 |
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2034 std::string actualMD5; |
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2035 Toolbox::ComputeMD5(actualMD5, data); |
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2036 |
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2037 if (actualMD5 == info.GetCompressedMD5()) |
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2038 { |
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2039 // The compressed data is OK. If a compression algorithm was |
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2040 // applied to it, now check the MD5 of the uncompressed data. |
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2041 if (info.GetCompressionType() == CompressionType_None) |
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2042 { |
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2043 ok = true; |
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2044 } |
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2045 else |
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2046 { |
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2047 context.ReadAttachment(data, revision, publicId, StringToContentType(name), true); |
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2048 Toolbox::ComputeMD5(actualMD5, data); |
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2049 ok = (actualMD5 == info.GetUncompressedMD5()); |
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2050 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2051 } |
|
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|
2052 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2053 if (ok) |
|
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parents:
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|
2054 { |
|
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Alain Mazy <alain@mazy.be>
parents:
4272
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|
2055 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
|
2908
9d277f8ad698
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2905
diff
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|
2056 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2057 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2058 else |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2059 { |
|
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Alain Mazy <alain@mazy.be>
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4272
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|
2060 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2061 } |
|
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diff
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|
2062 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2063 |
|
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|
2064 |
| 974 | 2065 static void UploadAttachment(RestApiPutCall& call) |
|
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|
2066 { |
| 4414 | 2067 if (call.IsDocumentation()) |
| 2068 { | |
| 2069 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2070 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2071 call.GetDocumentation() | |
| 2072 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2073 .SetSummary("Set attachment") | |
| 2074 .SetDescription("Attach a file to the given DICOM " + r + | |
| 2075 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
| 2076 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 2077 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
| 2078 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
|
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2079 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
|
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2080 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
| 4414 | 2081 return; |
| 2082 } | |
| 2083 | |
|
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2084 ServerContext& context = OrthancRestApi::GetContext(call); |
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|
2085 CheckValidResourceType(call); |
|
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2086 |
|
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|
2087 std::string publicId = call.GetUriComponent("id", ""); |
|
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|
2088 std::string name = call.GetUriComponent("name", ""); |
|
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|
2089 |
|
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|
2090 FileContentType contentType = StringToContentType(name); |
|
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2091 if (IsUserContentType(contentType)) // It is forbidden to modify internal attachments |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2092 { |
|
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|
2093 int64_t oldRevision; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2094 std::string oldMD5; |
|
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|
2095 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
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2096 |
|
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2097 if (!hasOldRevision) |
|
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|
2098 { |
|
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|
2099 OrthancConfiguration::ReaderLock lock; |
|
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|
2100 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
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|
2101 { |
|
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|
2102 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
|
f7d5372b59b3
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|
2103 // the actual value of "oldRevision" if the metadata is |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2104 // inexistent as expected |
|
f7d5372b59b3
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4623
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|
2105 hasOldRevision = true; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2106 oldRevision = -1; // dummy value |
|
4640
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4627
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|
2107 oldMD5.clear(); // dummy value |
|
4627
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|
2108 } |
|
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|
2109 } |
|
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|
2110 |
|
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|
2111 int64_t newRevision; |
|
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|
2112 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
|
4640
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Sebastien Jodogne <s.jodogne@gmail.com>
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4627
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|
2113 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
|
66109d24d26e
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|
2114 |
|
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4627
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|
2115 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
|
2908
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Sebastien Jodogne <s.jodogne@gmail.com>
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2905
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|
2116 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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2117 } |
|
2128
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
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|
2118 else |
|
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
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|
2119 { |
|
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
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|
2120 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
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|
2121 } |
|
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|
2122 } |
|
5197fd35333c
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diff
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|
2123 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2124 |
| 974 | 2125 static void DeleteAttachment(RestApiDeleteCall& call) |
|
751
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parents:
diff
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|
2126 { |
| 4413 | 2127 if (call.IsDocumentation()) |
| 2128 { | |
| 2129 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2130 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2131 call.GetDocumentation() | |
| 2132 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2133 .SetSummary("Delete attachment") | |
| 4414 | 2134 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
| 2135 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
| 4413 | 2136 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4627
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4623
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|
2137 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
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4623
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|
2138 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2139 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4413 | 2140 return; |
| 2141 } | |
| 2142 | |
|
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2143 CheckValidResourceType(call); |
|
5197fd35333c
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diff
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|
2144 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2145 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2146 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2147 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
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diff
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|
2148 |
|
2128
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
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|
2149 bool allowed; |
|
9329ba17a069
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2127
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|
2150 if (IsUserContentType(contentType)) |
|
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2127
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|
2151 { |
|
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2127
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|
2152 allowed = true; |
|
9329ba17a069
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|
2153 } |
|
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|
2154 else |
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2127
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|
2155 { |
|
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2935
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|
2156 OrthancConfiguration::ReaderLock lock; |
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|
2157 |
|
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2935
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changeset
|
2158 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
|
4767d36679ed
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|
2159 contentType == FileContentType_DicomAsJson) |
|
4767d36679ed
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|
2160 { |
|
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|
2161 allowed = true; |
|
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|
2162 } |
|
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|
2163 else |
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|
2164 { |
|
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|
2165 // It is forbidden to delete internal attachments, except for |
|
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|
2166 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
|
4767d36679ed
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|
2167 // would be automatically reconstructed on the next GET call) |
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|
2168 allowed = false; |
|
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2169 } |
|
2128
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|
2170 } |
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|
2171 |
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|
2172 if (allowed) |
|
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|
2173 { |
|
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|
2174 bool found; |
|
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|
2175 int64_t revision; |
|
4640
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|
2176 std::string md5; |
|
66109d24d26e
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changeset
|
2177 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
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|
2178 { |
|
4640
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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changeset
|
2179 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
|
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4623
diff
changeset
|
2180 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2181 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2182 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2183 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2184 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2185 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2186 throw OrthancException(ErrorCode_Revision, |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2187 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2188 } |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2189 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2190 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2191 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
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|
2192 false, -1 /* dummy value */, "" /* dummy value */); |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2193 } |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2194 } |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2195 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2196 if (found) |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2197 { |
|
f7d5372b59b3
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parents:
4623
diff
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|
2198 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
f7d5372b59b3
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4623
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|
2199 } |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2200 else |
|
f7d5372b59b3
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parents:
4623
diff
changeset
|
2201 { |
|
f7d5372b59b3
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4623
diff
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|
2202 throw OrthancException(ErrorCode_UnknownResource); |
|
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|
2203 } |
|
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2204 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
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|
2205 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2206 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
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|
2207 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
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|
2208 } |
|
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2209 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2210 |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2211 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2212 template <enum CompressionType compression> |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2213 static void ChangeAttachmentCompression(RestApiPostCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2214 { |
| 4413 | 2215 if (call.IsDocumentation()) |
| 2216 { | |
| 2217 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2218 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2219 call.GetDocumentation() | |
| 2220 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2221 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
| 2222 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
| 2223 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2224 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
| 4413 | 2225 return; |
| 2226 } | |
| 2227 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2228 CheckValidResourceType(call); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2229 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2230 std::string publicId = call.GetUriComponent("id", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2231 std::string name = call.GetUriComponent("name", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2232 FileContentType contentType = StringToContentType(name); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
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|
2233 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2234 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2235 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2236 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2237 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2238 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2239 static void IsAttachmentCompressed(RestApiGetCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2240 { |
| 4413 | 2241 if (call.IsDocumentation()) |
| 2242 { | |
| 2243 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2244 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
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4623
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|
2245 AddAttachmentDocumentation(call, r); |
| 4413 | 2246 call.GetDocumentation() |
| 2247 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2248 .SetSummary("Is attachment compressed?") | |
| 2249 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
| 2250 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
| 2251 return; | |
| 2252 } | |
| 2253 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2254 FileInfo info; |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
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|
2255 if (GetAttachmentInfo(info, call)) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2256 { |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2257 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2258 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
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|
2259 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2260 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2261 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2262 |
| 782 | 2263 // Raw access to the DICOM tags of an instance ------------------------------ |
| 2264 | |
| 974 | 2265 static void GetRawContent(RestApiGetCall& call) |
| 782 | 2266 { |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
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4404
diff
changeset
|
2267 if (call.IsDocumentation()) |
|
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4404
diff
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|
2268 { |
|
5466f336b09f
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4404
diff
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|
2269 call.GetDocumentation() |
|
5466f336b09f
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diff
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|
2270 .SetTag("Instances") |
|
5466f336b09f
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4404
diff
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|
2271 .SetSummary("Get raw tag") |
|
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4404
diff
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|
2272 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
|
5466f336b09f
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4404
diff
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|
2273 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
5466f336b09f
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diff
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|
2274 .SetUriArgument("...", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
|
5466f336b09f
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diff
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|
2275 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
|
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diff
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|
2276 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
|
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diff
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|
2277 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
|
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|
2278 "or JSON array containing the list of available tags if accessing a dataset"); |
|
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|
2279 return; |
|
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changeset
|
2280 } |
|
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diff
changeset
|
2281 |
| 782 | 2282 std::string id = call.GetUriComponent("id", ""); |
| 2283 | |
| 2284 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
| 2285 | |
| 2286 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
| 2287 } | |
| 2288 | |
|
751
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changeset
|
2289 |
|
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diff
changeset
|
2290 |
|
960
abac5c83134f
simplified and extensive shared-tags
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parents:
959
diff
changeset
|
2291 static bool ExtractSharedTags(Json::Value& shared, |
|
abac5c83134f
simplified and extensive shared-tags
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|
2292 ServerContext& context, |
|
abac5c83134f
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changeset
|
2293 const std::string& publicId) |
|
958
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|
2294 { |
|
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diff
changeset
|
2295 // Retrieve all the instances of this patient/study/series |
|
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|
2296 typedef std::list<std::string> Instances; |
|
1fbe89dc18b5
extraction of the shared tags
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|
2297 Instances instances; |
|
959
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fix possible race condition
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diff
changeset
|
2298 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
958
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extraction of the shared tags
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|
2299 |
|
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|
2300 // Loop over the instances |
|
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|
2301 bool isFirst = true; |
|
960
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diff
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|
2302 shared = Json::objectValue; |
|
958
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|
2303 |
|
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changeset
|
2304 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2305 it != instances.end(); ++it) |
|
958
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|
2306 { |
|
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|
2307 // Get the tags of the current instance, in the simplified format |
|
960
abac5c83134f
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changeset
|
2308 Json::Value tags; |
|
959
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fix possible race condition
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|
2309 |
|
bd5659f2a50a
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diff
changeset
|
2310 try |
|
bd5659f2a50a
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diff
changeset
|
2311 { |
| 2124 | 2312 context.ReadDicomAsJson(tags, *it); |
|
959
bd5659f2a50a
fix possible race condition
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diff
changeset
|
2313 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2314 catch (OrthancException&) |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2315 { |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2316 // Race condition: This instance has been removed since |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2317 // (*). Ignore this instance. |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2318 continue; |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2319 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2320 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2321 if (tags.type() != Json::objectValue) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2322 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2323 return false; // Error |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2324 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2325 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2326 // Only keep the tags that are mapped to a string |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2327 Json::Value::Members members = tags.getMemberNames(); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2328 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2329 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2330 const Json::Value& tag = tags[members[i]]; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2331 if (tag.type() != Json::objectValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2332 tag["Type"].type() != Json::stringValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2333 tag["Type"].asString() != "String") |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2334 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2335 tags.removeMember(members[i]); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2336 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2337 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2338 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2339 if (isFirst) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2340 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2341 // This is the first instance, keep its tags as such |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2342 shared = tags; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2343 isFirst = false; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2344 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2345 else |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2346 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2347 // Loop over all the members of the shared tags extracted so |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2348 // far. If the value of one of these tags does not match its |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2349 // value in the current instance, remove it. |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2350 members = shared.getMemberNames(); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2351 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2352 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2353 if (!tags.isMember(members[i]) || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2354 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2355 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2356 shared.removeMember(members[i]); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2357 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2358 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2359 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2360 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2361 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2362 return true; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2363 } |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2364 |
|
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2365 |
| 974 | 2366 static void GetSharedTags(RestApiGetCall& call) |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2367 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2368 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2369 { |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2370 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2371 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2372 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2373 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2374 .SetSummary("Get shared tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2375 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2376 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
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parents:
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diff
changeset
|
2377 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2378 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2379 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
|
0b27841950d5
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parents:
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diff
changeset
|
2380 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2381 } |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2382 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2383 ServerContext& context = OrthancRestApi::GetContext(call); |
|
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2384 std::string publicId = call.GetUriComponent("id", ""); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2385 |
|
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2386 Json::Value sharedTags; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2387 if (ExtractSharedTags(sharedTags, context, publicId)) |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2388 { |
|
abac5c83134f
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parents:
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diff
changeset
|
2389 // Success: Send the value of the shared tags |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
2390 AnswerDicomAsJson(call, sharedTags); |
|
960
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2391 } |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2392 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2393 |
|
1fbe89dc18b5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2394 |
|
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2395 static void GetModuleInternal(RestApiGetCall& call, |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
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parents:
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diff
changeset
|
2396 ResourceType resourceType, |
|
1276
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parents:
1201
diff
changeset
|
2397 DicomModule module) |
|
963
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retrieve values of modules
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parents:
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diff
changeset
|
2398 { |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2399 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2400 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2401 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2402 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2403 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2404 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
|
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2405 { |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2406 throw OrthancException(ErrorCode_NotImplemented); |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2407 } |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2408 |
|
963
81134ea872ff
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parents:
960
diff
changeset
|
2409 ServerContext& context = OrthancRestApi::GetContext(call); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2410 std::string publicId = call.GetUriComponent("id", ""); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2411 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2412 std::set<DicomTag> ignoreTagLength; |
|
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2413 ParseSetOfTags(ignoreTagLength, call, "ignore-length"); |
|
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2414 |
|
1276
6164f7200c43
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parents:
1201
diff
changeset
|
2415 typedef std::set<DicomTag> ModuleTags; |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2416 ModuleTags moduleTags; |
| 1368 | 2417 DicomTag::AddTagsForModule(moduleTags, module); |
|
963
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parents:
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diff
changeset
|
2418 |
|
81134ea872ff
retrieve values of modules
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parents:
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diff
changeset
|
2419 Json::Value tags; |
|
81134ea872ff
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diff
changeset
|
2420 |
|
81134ea872ff
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parents:
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diff
changeset
|
2421 if (resourceType != ResourceType_Instance) |
|
81134ea872ff
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parents:
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diff
changeset
|
2422 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2423 // Retrieve all the instances of this patient/study/series |
|
81134ea872ff
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parents:
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diff
changeset
|
2424 typedef std::list<std::string> Instances; |
|
81134ea872ff
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diff
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|
2425 Instances instances; |
|
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|
2426 context.GetIndex().GetChildInstances(instances, publicId); |
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2427 |
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|
2428 if (instances.empty()) |
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2429 { |
|
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|
2430 return; // Error: No instance (should never happen) |
|
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|
2431 } |
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|
2432 |
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|
2433 // Select one child instance |
|
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diff
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|
2434 publicId = instances.front(); |
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2435 } |
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|
2436 |
|
2409
e4045b3c9772
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2437 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
|
963
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2438 |
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|
2439 // Filter the tags of the instance according to the module |
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2440 Json::Value result = Json::objectValue; |
| 1303 | 2441 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
|
963
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|
2442 { |
|
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|
2443 std::string s = tag->Format(); |
|
963
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2444 if (tags.isMember(s)) |
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|
2445 { |
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|
2446 result[s] = tags[s]; |
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2447 } |
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2448 } |
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|
2449 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
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|
2450 AnswerDicomAsJson(call, result); |
|
1054
1701dcb6f554
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|
2451 } |
|
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2452 |
|
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|
2453 |
|
1701dcb6f554
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2454 |
|
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|
2455 template <enum ResourceType resourceType, |
|
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|
2456 enum DicomModule module> |
|
1054
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2457 static void GetModule(RestApiGetCall& call) |
|
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|
2458 { |
| 4419 | 2459 if (call.IsDocumentation()) |
| 2460 { | |
| 2461 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); | |
| 2462 std::string m; | |
| 2463 switch (module) | |
| 2464 { | |
| 2465 case DicomModule_Patient: | |
| 2466 m = "patient"; | |
| 2467 break; | |
| 2468 case DicomModule_Study: | |
| 2469 m = "study"; | |
| 2470 break; | |
| 2471 case DicomModule_Series: | |
| 2472 m = "series"; | |
| 2473 break; | |
| 2474 case DicomModule_Instance: | |
| 2475 m = "instance"; | |
| 2476 break; | |
| 2477 default: | |
| 2478 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 2479 } | |
| 2480 call.GetDocumentation() | |
| 2481 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) | |
| 2482 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) | |
| 2483 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") | |
| 2484 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") | |
| 2485 .SetHttpGetArgument("ignore-length", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 2486 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) | |
| 2487 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) | |
| 2488 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); | |
| 2489 return; | |
| 2490 } | |
| 2491 | |
|
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|
2492 GetModuleInternal(call, resourceType, module); |
|
963
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|
2493 } |
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|
2494 |
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|
2495 |
| 1722 | 2496 namespace |
| 2497 { | |
| 2498 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
| 2499 } | |
| 2500 | |
| 2501 | |
| 2502 static void AccumulateLookupResults(LookupResults& result, | |
|
1718
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diff
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|
2503 ServerIndex& index, |
|
2b812969e136
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|
2504 const DicomTag& tag, |
|
1719
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fix Orthanc.test_lookup
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parents:
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|
2505 const std::string& value, |
|
3b1f7e706d38
fix Orthanc.test_lookup
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diff
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|
2506 ResourceType level) |
|
1718
2b812969e136
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parents:
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diff
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|
2507 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2508 std::vector<std::string> tmp; |
|
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
2509 index.LookupIdentifierExact(tmp, level, tag, value); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
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parents:
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diff
changeset
|
2510 |
|
3034
54e422fe31ce
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diff
changeset
|
2511 for (size_t i = 0; i < tmp.size(); i++) |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
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diff
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|
2512 { |
|
3034
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parents:
3033
diff
changeset
|
2513 result.push_back(std::make_pair(level, tmp[i])); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
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parents:
1718
diff
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|
2514 } |
|
1718
2b812969e136
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diff
changeset
|
2515 } |
|
2b812969e136
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diff
changeset
|
2516 |
|
2b812969e136
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diff
changeset
|
2517 |
|
1139
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diff
changeset
|
2518 static void Lookup(RestApiPostCall& call) |
|
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diff
changeset
|
2519 { |
| 4422 | 2520 if (call.IsDocumentation()) |
| 2521 { | |
| 2522 call.GetDocumentation() | |
| 2523 .SetTag("System") | |
| 2524 .SetSummary("Look for DICOM identifiers") | |
| 2525 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
| 2526 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
| 2527 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
| 2528 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
| 2529 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
| 2530 "DICOM resource that is stored by Orthanc"); | |
| 2531 return; | |
| 2532 } | |
| 2533 | |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
2534 std::string tag; |
|
8dc80ba768aa
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
2535 call.BodyToString(tag); |
|
1139
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diff
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|
2536 |
| 1722 | 2537 LookupResults resources; |
|
1718
2b812969e136
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parents:
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diff
changeset
|
2538 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
1719
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fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2539 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
|
3b1f7e706d38
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parents:
1718
diff
changeset
|
2540 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
|
3b1f7e706d38
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parents:
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diff
changeset
|
2541 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2542 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
|
1718
2b812969e136
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diff
changeset
|
2543 |
|
2b812969e136
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diff
changeset
|
2544 Json::Value result = Json::arrayValue; |
| 1722 | 2545 for (LookupResults::const_iterator |
|
1718
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diff
changeset
|
2546 it = resources.begin(); it != resources.end(); ++it) |
|
1139
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|
2547 { |
|
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diff
changeset
|
2548 ResourceType type = it->first; |
|
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diff
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|
2549 const std::string& id = it->second; |
|
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2550 |
|
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diff
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|
2551 Json::Value item = Json::objectValue; |
|
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|
2552 item["Type"] = EnumerationToString(type); |
|
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diff
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|
2553 item["ID"] = id; |
|
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diff
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|
2554 item["Path"] = GetBasePath(type, id); |
|
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|
2555 |
|
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diff
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|
2556 result.append(item); |
|
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|
2557 } |
|
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|
2558 |
|
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diff
changeset
|
2559 call.GetOutput().AnswerJson(result); |
|
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|
2560 } |
|
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changeset
|
2561 |
|
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changeset
|
2562 |
|
3001
7695a9c81099
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|
2563 namespace |
|
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|
2564 { |
|
3021
2cbafb5d5a62
renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
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diff
changeset
|
2565 class FindVisitor : public ServerContext::ILookupVisitor |
|
3001
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changeset
|
2566 { |
|
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|
2567 private: |
|
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changeset
|
2568 bool isComplete_; |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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|
2569 std::list<std::string> resources_; |
|
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changeset
|
2570 |
|
7695a9c81099
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changeset
|
2571 public: |
|
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changeset
|
2572 FindVisitor() : |
|
7695a9c81099
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|
2573 isComplete_(false) |
|
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|
2574 { |
|
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|
2575 } |
| 4205 | 2576 |
| 2577 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
|
3012
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2578 { |
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|
2579 return false; // (*) |
|
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|
2580 } |
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|
2581 |
| 4205 | 2582 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
|
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|
2583 { |
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|
2584 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
|
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|
2585 } |
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|
2586 |
|
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|
2587 virtual void Visit(const std::string& publicId, |
|
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|
2588 const std::string& instanceId /* unused */, |
|
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|
2589 const DicomMap& mainDicomTags /* unused */, |
| 4205 | 2590 const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE |
|
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|
2591 { |
|
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|
2592 resources_.push_back(publicId); |
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|
2593 } |
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|
2594 |
|
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|
2595 void Answer(RestApiOutput& output, |
|
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|
2596 ServerIndex& index, |
|
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|
2597 ResourceType level, |
|
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|
2598 bool expand) const |
|
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|
2599 { |
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|
2600 AnswerListOfResources(output, index, resources_, level, expand); |
|
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2601 } |
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|
2602 }; |
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|
2603 } |
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|
2604 |
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|
2605 |
| 1354 | 2606 static void Find(RestApiPostCall& call) |
| 2607 { | |
| 2998 | 2608 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
| 2609 static const char* const KEY_EXPAND = "Expand"; | |
| 2610 static const char* const KEY_LEVEL = "Level"; | |
| 2611 static const char* const KEY_LIMIT = "Limit"; | |
| 2612 static const char* const KEY_QUERY = "Query"; | |
| 2613 static const char* const KEY_SINCE = "Since"; | |
| 2614 | |
| 4421 | 2615 if (call.IsDocumentation()) |
| 2616 { | |
| 2617 call.GetDocumentation() | |
| 2618 .SetTag("System") | |
| 2619 .SetSummary("Look for local resources") | |
| 2620 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
| 2621 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
| 2622 "https://book.orthanc-server.com/users/rest.html#performing-finds-within-orthanc") | |
| 2623 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, | |
| 2624 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
| 2625 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
| 2626 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
| 2627 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
| 2628 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
| 2629 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
| 2630 "Limit the number of reported resources", false) | |
| 2631 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
| 2632 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
| 2633 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, | |
| 2634 "Associative array containing the filter on the values of the DICOM tags", true) | |
| 2635 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " | |
| 2636 "about the reported resources (if `Expand` argument is `true`)"); | |
| 2637 return; | |
| 2638 } | |
| 2639 | |
| 1358 | 2640 ServerContext& context = OrthancRestApi::GetContext(call); |
| 1354 | 2641 |
| 2642 Json::Value request; | |
|
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2643 if (!call.ParseJsonRequest(request) || |
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2644 request.type() != Json::objectValue) |
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|
2645 { |
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|
2646 throw OrthancException(ErrorCode_BadRequest, |
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|
2647 "The body must contain a JSON object"); |
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|
2648 } |
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2649 else if (!request.isMember(KEY_LEVEL) || |
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|
2650 request[KEY_LEVEL].type() != Json::stringValue) |
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|
2651 { |
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|
2652 throw OrthancException(ErrorCode_BadRequest, |
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|
2653 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
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2654 } |
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|
2655 else if (!request.isMember(KEY_QUERY) && |
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|
2656 request[KEY_QUERY].type() != Json::objectValue) |
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|
2657 { |
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|
2658 throw OrthancException(ErrorCode_BadRequest, |
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|
2659 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
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2660 } |
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2661 else if (request.isMember(KEY_CASE_SENSITIVE) && |
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|
2662 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
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|
2663 { |
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|
2664 throw OrthancException(ErrorCode_BadRequest, |
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|
2665 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" should be a Boolean"); |
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|
2666 } |
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2667 else if (request.isMember(KEY_LIMIT) && |
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|
2668 request[KEY_LIMIT].type() != Json::intValue) |
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|
2669 { |
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|
2670 throw OrthancException(ErrorCode_BadRequest, |
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|
2671 "Field \"" + std::string(KEY_LIMIT) + "\" should be an integer"); |
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2672 } |
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2673 else if (request.isMember(KEY_SINCE) && |
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|
2674 request[KEY_SINCE].type() != Json::intValue) |
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2675 { |
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2676 throw OrthancException(ErrorCode_BadRequest, |
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2677 "Field \"" + std::string(KEY_SINCE) + "\" should be an integer"); |
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2678 } |
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2679 else |
| 1354 | 2680 { |
| 2681 bool expand = false; | |
| 2998 | 2682 if (request.isMember(KEY_EXPAND)) |
| 1354 | 2683 { |
| 2998 | 2684 expand = request[KEY_EXPAND].asBool(); |
| 1354 | 2685 } |
| 2686 | |
|
1374
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|
2687 bool caseSensitive = false; |
| 2998 | 2688 if (request.isMember(KEY_CASE_SENSITIVE)) |
|
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2689 { |
| 2998 | 2690 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
|
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2691 } |
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2692 |
| 1758 | 2693 size_t limit = 0; |
| 2998 | 2694 if (request.isMember(KEY_LIMIT)) |
| 1758 | 2695 { |
| 2998 | 2696 int tmp = request[KEY_LIMIT].asInt(); |
| 1847 | 2697 if (tmp < 0) |
| 1758 | 2698 { |
|
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2699 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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2700 "Field \"" + std::string(KEY_LIMIT) + "\" should be a positive integer"); |
| 1758 | 2701 } |
| 1847 | 2702 |
| 2703 limit = static_cast<size_t>(tmp); | |
| 1758 | 2704 } |
| 2705 | |
|
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2706 size_t since = 0; |
| 2998 | 2707 if (request.isMember(KEY_SINCE)) |
|
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|
2708 { |
| 2998 | 2709 int tmp = request[KEY_SINCE].asInt(); |
|
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2710 if (tmp < 0) |
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2711 { |
|
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2712 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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2713 "Field \"" + std::string(KEY_SINCE) + "\" should be a positive integer"); |
|
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|
2714 } |
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2715 |
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|
2716 since = static_cast<size_t>(tmp); |
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2717 } |
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2718 |
|
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|
2719 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
| 1360 | 2720 |
|
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|
2721 DatabaseLookup query; |
| 1358 | 2722 |
| 2998 | 2723 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
| 1354 | 2724 for (size_t i = 0; i < members.size(); i++) |
| 2725 { | |
| 2998 | 2726 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
| 1354 | 2727 { |
|
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changeset
|
2728 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
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|
2729 "Tag \"" + members[i] + "\" should be associated with a string"); |
| 1354 | 2730 } |
| 2731 | |
|
3163
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
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parents:
3094
diff
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|
2732 const std::string value = request[KEY_QUERY][members[i]].asString(); |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2733 |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
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parents:
3094
diff
changeset
|
2734 if (!value.empty()) |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2735 { |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2736 // An empty string corresponds to an universal constraint, |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2737 // so we ignore it. This mimics the behavior of class |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2738 // "OrthancFindRequestHandler" |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2739 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
|
cf91b6f22278
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2740 value, caseSensitive, true); |
|
cf91b6f22278
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parents:
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|
2741 } |
|
1361
94ffb597d297
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1360
diff
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|
2742 } |
| 2876 | 2743 |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2744 FindVisitor visitor; |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2745 context.Apply(visitor, query, level, since, limit); |
|
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
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|
2746 visitor.Answer(call.GetOutput(), context.GetIndex(), level, expand); |
| 1354 | 2747 } |
| 2748 } | |
| 2749 | |
| 2750 | |
|
1140
94c5f6623b3a
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diff
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|
2751 template <enum ResourceType start, |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2752 enum ResourceType end> |
|
94c5f6623b3a
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diff
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|
2753 static void GetChildResources(RestApiGetCall& call) |
|
94c5f6623b3a
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diff
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|
2754 { |
| 4415 | 2755 if (call.IsDocumentation()) |
| 2756 { | |
| 2757 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); | |
| 2758 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 2759 call.GetDocumentation() | |
| 2760 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 2761 .SetSummary("Get child " + children) | |
| 2762 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
|
4416
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diff
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|
2763 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 2764 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 2765 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) | |
| 2766 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
| 2767 return; | |
| 2768 } | |
| 2769 | |
|
1140
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2770 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
94c5f6623b3a
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diff
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|
2771 |
|
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1139
diff
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|
2772 std::list<std::string> a, b, c; |
|
94c5f6623b3a
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diff
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|
2773 a.push_back(call.GetUriComponent("id", "")); |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2774 |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2775 ResourceType type = start; |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2776 while (type != end) |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2777 { |
|
94c5f6623b3a
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diff
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|
2778 b.clear(); |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2779 |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
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|
2780 for (std::list<std::string>::const_iterator |
| 1303 | 2781 it = a.begin(); it != a.end(); ++it) |
|
1140
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2782 { |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2783 index.GetChildren(c, *it); |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2784 b.splice(b.begin(), c); |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2785 } |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2786 |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2787 type = GetChildResourceType(type); |
|
1140
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diff
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|
2788 |
|
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diff
changeset
|
2789 a.clear(); |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2790 a.splice(a.begin(), b); |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2791 } |
|
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parents:
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diff
changeset
|
2792 |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
2793 Json::Value result = Json::arrayValue; |
|
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2794 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
2795 for (std::list<std::string>::const_iterator |
| 1303 | 2796 it = a.begin(); it != a.end(); ++it) |
|
1140
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2797 { |
| 4554 | 2798 Json::Value resource; |
| 2799 if (OrthancRestApi::GetIndex(call).ExpandResource(resource, *it, end)) | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
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parents:
1139
diff
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|
2800 { |
| 4554 | 2801 result.append(resource); |
|
1140
94c5f6623b3a
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diff
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|
2802 } |
|
94c5f6623b3a
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parents:
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diff
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|
2803 } |
|
94c5f6623b3a
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diff
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|
2804 |
|
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diff
changeset
|
2805 call.GetOutput().AnswerJson(result); |
|
94c5f6623b3a
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diff
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|
2806 } |
|
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|
2807 |
|
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|
2808 |
|
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diff
changeset
|
2809 static void GetChildInstancesTags(RestApiGetCall& call) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2810 { |
|
4416
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2811 if (call.IsDocumentation()) |
|
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|
2812 { |
|
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diff
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|
2813 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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|
2814 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
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diff
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|
2815 call.GetDocumentation() |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2816 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
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|
2817 .SetSummary("Get tags of instances") |
|
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2818 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
|
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|
2819 " whose Orthanc identifier is provided in the URL") |
|
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|
2820 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
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|
2821 .SetHttpGetArgument("ignore-length", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
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|
2822 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
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2823 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
|
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|
2824 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
|
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|
2825 return; |
|
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2826 } |
|
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2827 |
|
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2828 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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|
2829 std::string publicId = call.GetUriComponent("id", ""); |
|
2622
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|
2830 DicomToJsonFormat format = GetDicomFormat(call); |
|
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2831 |
|
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|
2832 std::set<DicomTag> ignoreTagLength; |
|
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|
2833 ParseSetOfTags(ignoreTagLength, call, "ignore-length"); |
|
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|
2834 |
|
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|
2835 // Retrieve all the instances of this patient/study/series |
|
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|
2836 typedef std::list<std::string> Instances; |
|
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|
2837 Instances instances; |
|
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2838 |
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changeset
|
2839 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
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2840 |
|
1201
09aa7c126be9
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1172
diff
changeset
|
2841 Json::Value result = Json::objectValue; |
|
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|
2842 |
|
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|
2843 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2844 it != instances.end(); ++it) |
|
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|
2845 { |
|
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changeset
|
2846 Json::Value full; |
|
2409
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|
2847 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
|
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2848 |
|
2622
3603a2e14592
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
2849 if (format != DicomToJsonFormat_Full) |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2850 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2851 Json::Value simplified; |
|
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
2852 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
2853 result[*it] = simplified; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2854 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2855 else |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2856 { |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
2857 result[*it] = full; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2858 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2859 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2860 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2861 call.GetOutput().AnswerJson(result); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2862 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2863 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
2864 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2865 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2866 template <enum ResourceType start, |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2867 enum ResourceType end> |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2868 static void GetParentResource(RestApiGetCall& call) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2869 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2870 assert(start > end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2871 |
| 4415 | 2872 if (call.IsDocumentation()) |
| 2873 { | |
| 2874 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); | |
| 2875 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 2876 call.GetDocumentation() | |
| 2877 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 2878 .SetSummary("Get parent " + parent) | |
| 2879 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2880 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 2881 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 2882 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
| 2883 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
| 2884 return; | |
| 2885 } | |
| 2886 | |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2887 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2888 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2889 std::string current = call.GetUriComponent("id", ""); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2890 ResourceType currentType = start; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2891 while (currentType > end) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2892 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2893 std::string parent; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2894 if (!index.LookupParent(parent, current)) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2895 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2896 // Error that could happen if the resource gets deleted by |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2897 // another concurrent call |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2898 return; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2899 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2900 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2901 current = parent; |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2902 currentType = GetParentResourceType(currentType); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2903 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2904 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2905 assert(currentType == end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2906 |
| 4554 | 2907 Json::Value resource; |
| 2908 if (OrthancRestApi::GetIndex(call).ExpandResource(resource, current, end)) | |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2909 { |
| 4554 | 2910 call.GetOutput().AnswerJson(resource); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2911 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2912 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2913 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2914 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2915 static void ExtractPdf(RestApiGetCall& call) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2916 { |
| 4407 | 2917 if (call.IsDocumentation()) |
| 2918 { | |
| 2919 call.GetDocumentation() | |
| 2920 .SetTag("Instances") | |
| 2921 .SetSummary("Get embedded PDF") | |
| 2922 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
| 2923 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
| 2924 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
| 2925 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
| 2926 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
| 2927 return; | |
| 2928 } | |
| 2929 | |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2930 const std::string id = call.GetUriComponent("id", ""); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2931 std::string pdf; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2932 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2933 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2934 if (locker.GetDicom().ExtractPdf(pdf)) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2935 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2936 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2937 return; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2938 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2939 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2940 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2941 |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2942 static void OrderSlices(RestApiGetCall& call) |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2943 { |
| 4421 | 2944 if (call.IsDocumentation()) |
| 2945 { | |
| 2946 call.GetDocumentation() | |
| 2947 .SetDeprecated() | |
| 2948 .SetTag("Series") | |
| 2949 .SetSummary("Order the slices") | |
| 2950 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
| 2951 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
| 2952 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
| 2953 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 2954 "Ordered list of paths to DICOM instances") | |
| 2955 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 2956 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
| 2957 "in the case of multiframe images.") | |
| 2958 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
| 2959 "Same information as the `Slices` field, but in a compact form") | |
| 2960 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
| 2961 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
| 2962 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); | |
| 2963 return; | |
| 2964 } | |
| 2965 | |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2966 const std::string id = call.GetUriComponent("id", ""); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2967 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2968 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2969 SliceOrdering ordering(index, id); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2970 |
|
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
2971 Json::Value result; |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
2972 ordering.Format(result); |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
2973 call.GetOutput().AnswerJson(result); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2974 } |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2975 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2976 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2977 static void GetInstanceHeader(RestApiGetCall& call) |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2978 { |
| 4404 | 2979 if (call.IsDocumentation()) |
| 2980 { | |
| 2981 call.GetDocumentation() | |
| 2982 .SetTag("Instances") | |
| 2983 .SetSummary("Get DICOM meta-header") | |
| 2984 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
| 2985 "combines hexadecimal tags with human-readable description.") | |
| 2986 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 2987 .SetHttpGetArgument("simplify", RestApiCallDocumentation::Type_String, | |
| 2988 "If present, report the DICOM tags in human-readable format", false) | |
| 2989 .SetHttpGetArgument("short", RestApiCallDocumentation::Type_String, | |
| 2990 "If present, report the DICOM tags indexed in hexadecimal format", false) | |
| 2991 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
| 2992 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); | |
| 2993 return; | |
| 2994 } | |
| 2995 | |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2996 ServerContext& context = OrthancRestApi::GetContext(call); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2997 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2998 std::string publicId = call.GetUriComponent("id", ""); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2999 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3000 std::string dicomContent; |
| 2124 | 3001 context.ReadDicom(dicomContent, publicId); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3002 |
|
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3003 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3004 // speed up things here |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3005 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3006 ParsedDicomFile dicom(dicomContent); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3007 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3008 Json::Value header; |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3009 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3010 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3011 AnswerDicomAsJson(call, header); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3012 } |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3013 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3014 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3015 static void InvalidateTags(RestApiPostCall& call) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3016 { |
| 4420 | 3017 if (call.IsDocumentation()) |
| 3018 { | |
| 3019 call.GetDocumentation() | |
| 3020 .SetTag("System") | |
| 3021 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
| 3022 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
| 3023 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
| 3024 "This is notably useful after changes to the `Dictionary` configuration option. " | |
| 3025 "https://book.orthanc-server.com/faq/orthanc-storage.html#storage-area"); | |
| 3026 return; | |
| 3027 } | |
| 3028 | |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3029 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3030 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3031 // Loop over the instances, grouping them by parent studies so as |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3032 // to avoid large memory consumption |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3033 std::list<std::string> studies; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3034 index.GetAllUuids(studies, ResourceType_Study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3035 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3036 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3037 study = studies.begin(); study != studies.end(); ++study) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3038 { |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3039 std::list<std::string> instances; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3040 index.GetChildInstances(instances, *study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3041 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3042 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3043 instance = instances.begin(); instance != instances.end(); ++instance) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3044 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3045 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3046 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3047 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3048 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3049 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3050 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3051 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3052 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3053 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3054 template <enum ResourceType type> |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3055 static void ReconstructResource(RestApiPostCall& call) |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3056 { |
| 4420 | 3057 if (call.IsDocumentation()) |
| 3058 { | |
| 3059 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
| 3060 call.GetDocumentation() | |
| 3061 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
| 3062 .SetSummary("Reconstruct tags of " + resource) | |
| 3063 .SetDescription("Reconstruct the main DICOM tags of the " + resource + " whose Orthanc identifier is provided " | |
| 3064 "in the URL. This is useful if child studies/series/instances have inconsistent values for " | |
| 3065 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
| 3066 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
| 3067 "parsed again, and the Orthanc index will be updated accordingly.") | |
| 3068 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
| 3069 return; | |
| 3070 } | |
| 3071 | |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3072 ServerContext& context = OrthancRestApi::GetContext(call); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3073 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", "")); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3074 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3075 } |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3076 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3077 |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3078 static void ReconstructAllResources(RestApiPostCall& call) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3079 { |
| 4420 | 3080 if (call.IsDocumentation()) |
| 3081 { | |
| 3082 call.GetDocumentation() | |
| 3083 .SetTag("System") | |
| 3084 .SetSummary("Reconstruct all the index") | |
| 3085 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
| 3086 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
| 3087 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
| 3088 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated."); | |
| 3089 return; | |
| 3090 } | |
| 3091 | |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3092 ServerContext& context = OrthancRestApi::GetContext(call); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3093 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3094 std::list<std::string> studies; |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3095 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3096 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3097 for (std::list<std::string>::const_iterator |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3098 study = studies.begin(); study != studies.end(); ++study) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3099 { |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3100 ServerToolbox::ReconstructResource(context, *study); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3101 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3102 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3103 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3104 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3105 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3106 |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3107 static void BulkDelete(RestApiPostCall& call) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3108 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3109 if (call.IsDocumentation()) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3110 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3111 call.GetDocumentation() |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3112 .SetTag("System") |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3113 .SetSummary("Delete a set of instances") |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3114 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3115 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", false) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3116 .SetDescription("Dellete all the DICOM patients, studies, series or instances " |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3117 "whose identifiers are provided in the `Resources` field."); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3118 return; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3119 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3120 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3121 ServerContext& context = OrthancRestApi::GetContext(call); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3122 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3123 Json::Value request; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3124 if (!call.ParseJsonRequest(request) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3125 request.type() != Json::objectValue) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3126 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3127 throw OrthancException(ErrorCode_BadRequest, |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3128 "The body must contain a JSON object"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3129 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3130 else |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3131 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3132 std::set<std::string> resources; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3133 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3134 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3135 for (std::set<std::string>::const_iterator |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3136 it = resources.begin(); it != resources.end(); ++it) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3137 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3138 ResourceType type; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3139 Json::Value remainingAncestor; // Unused |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3140 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3141 if (!context.GetIndex().LookupResourceType(type, *it) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3142 !context.DeleteResource(remainingAncestor, *it, type)) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3143 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3144 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3145 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3146 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3147 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3148 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3149 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3150 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3151 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3152 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3153 void OrthancRestApi::RegisterResources() |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3154 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3155 Register("/instances", ListResources<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3156 Register("/patients", ListResources<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3157 Register("/series", ListResources<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3158 Register("/studies", ListResources<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3159 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3160 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3161 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3162 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3163 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3164 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3165 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3166 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3167 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3168 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3169 Register("/instances/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3170 Register("/patients/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3171 Register("/studies/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3172 Register("/series/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3173 |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3174 Register("/patients/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3175 Register("/series/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3176 Register("/studies/{id}/shared-tags", GetSharedTags); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
3177 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3178 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3179 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3180 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3181 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3182 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3183 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3184 Register("/instances/{id}/file", GetInstanceFile); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3185 Register("/instances/{id}/export", ExportInstanceFile); |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3186 Register("/instances/{id}/tags", GetInstanceTagsBis); |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3187 Register("/instances/{id}/simplified-tags", GetInstanceTags<DicomToJsonFormat_Human>); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3188 Register("/instances/{id}/frames", ListFrames); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3189 |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
3190 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3191 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3192 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3193 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3194 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3195 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3196 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3197 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3198 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3199 Register("/instances/{id}/pdf", ExtractPdf); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3200 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3201 Register("/instances/{id}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3202 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3203 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3204 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3205 Register("/instances/{id}/matlab", GetMatlabImage); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3206 Register("/instances/{id}/header", GetInstanceHeader); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3207 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3208 Register("/patients/{id}/protected", IsProtectedPatient); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3209 Register("/patients/{id}/protected", SetPatientProtection); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3210 |
| 4409 | 3211 std::vector<std::string> resourceTypes; |
| 3212 resourceTypes.push_back("patients"); | |
| 3213 resourceTypes.push_back("studies"); | |
| 3214 resourceTypes.push_back("series"); | |
| 3215 resourceTypes.push_back("instances"); | |
| 3216 | |
| 3217 for (size_t i = 0; i < resourceTypes.size(); i++) | |
| 3218 { | |
| 3219 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
| 3220 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
| 3221 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
| 3222 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3223 |
| 4409 | 3224 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
| 3225 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
| 3226 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
| 3227 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
| 3228 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
| 3229 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
| 3230 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
| 3231 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
| 3232 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
| 3233 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
| 3234 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
| 3235 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
| 3236 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
| 3237 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); | |
| 3238 } | |
| 782 | 3239 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3240 Register("/tools/invalidate-tags", InvalidateTags); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3241 Register("/tools/lookup", Lookup); |
| 1354 | 3242 Register("/tools/find", Find); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3243 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3244 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3245 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3246 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3247 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3248 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3249 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3250 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3251 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3252 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3253 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3254 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3255 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3256 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3257 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3258 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3259 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3260 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3261 |
| 782 | 3262 Register("/instances/{id}/content/*", GetRawContent); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3263 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3264 Register("/series/{id}/ordered-slices", OrderSlices); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3265 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3266 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3267 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3268 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3269 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3270 Register("/tools/reconstruct", ReconstructAllResources); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3271 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3272 Register("/tools/bulk-delete", BulkDelete); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3273 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3274 } |