Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 4769:9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Wed, 25 Aug 2021 15:20:48 +0200 |
| parents | 2b4da0ee6b73 |
| children | 3b78ba359db3 |
| rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
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6 * |
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7 * This program is free software: you can redistribute it and/or |
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8 * modify it under the terms of the GNU General Public License as |
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9 * published by the Free Software Foundation, either version 3 of the |
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10 * License, or (at your option) any later version. |
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11 * |
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12 * In addition, as a special exception, the copyright holders of this |
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13 * program give permission to link the code of its release with the |
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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15 * that use the same license as the "OpenSSL" library), and distribute |
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16 * the linked executables. You must obey the GNU General Public License |
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17 * in all respects for all of the code used other than "OpenSSL". If you |
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18 * modify file(s) with this exception, you may extend this exception to |
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19 * your version of the file(s), but you are not obligated to do so. If |
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20 * you do not wish to do so, delete this exception statement from your |
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21 * version. If you delete this exception statement from all source files |
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22 * in the program, then also delete it here. |
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23 * |
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24 * This program is distributed in the hope that it will be useful, but |
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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27 * General Public License for more details. |
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28 * |
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29 * You should have received a copy of the GNU General Public License |
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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31 **/ |
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32 |
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33 |
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34 #include "../PrecompiledHeadersServer.h" |
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35 #include "OrthancRestApi.h" |
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36 |
| 4045 | 37 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
| 38 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
| 39 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
| 40 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
| 41 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
| 42 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
| 43 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
| 44 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
| 45 #include "../../../OrthancFramework/Sources/Logging.h" | |
| 46 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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47 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
| 4045 | 48 |
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49 #include "../OrthancConfiguration.h" |
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50 #include "../Search/DatabaseLookup.h" |
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51 #include "../ServerContext.h" |
| 2131 | 52 #include "../ServerToolbox.h" |
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53 #include "../SliceOrdering.h" |
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54 |
| 3687 | 55 // This "include" is mandatory for Release builds using Linux Standard Base |
| 56 #include <boost/math/special_functions/round.hpp> | |
| 57 | |
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58 |
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59 /** |
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60 * This semaphore is used to limit the number of concurrent HTTP |
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61 * requests on CPU-intensive routes of the REST API, in order to |
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62 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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63 **/ |
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64 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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65 |
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66 |
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67 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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68 |
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69 static const char* const IGNORE_LENGTH = "ignore-length"; |
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70 |
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71 |
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72 namespace Orthanc |
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73 { |
| 4415 | 74 static std::string GetDocumentationSampleResource(ResourceType type) |
| 75 { | |
| 76 switch (type) | |
| 77 { | |
| 78 case Orthanc::ResourceType_Instance: | |
| 79 return "https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2"; | |
| 80 break; | |
| 81 | |
| 82 case Orthanc::ResourceType_Series: | |
| 83 return "https://demo.orthanc-server.com/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; | |
| 84 break; | |
| 85 | |
| 86 case Orthanc::ResourceType_Study: | |
| 87 return "https://demo.orthanc-server.com/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; | |
| 88 break; | |
| 89 | |
| 90 case Orthanc::ResourceType_Patient: | |
| 91 return "https://demo.orthanc-server.com/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; | |
| 92 break; | |
| 93 | |
| 94 default: | |
| 95 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 96 } | |
| 97 } | |
| 98 | |
| 99 | |
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100 static void AnswerDicomAsJson(RestApiCall& call, |
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101 const Json::Value& dicom, |
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102 DicomToJsonFormat mode) |
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103 { |
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104 if (mode != DicomToJsonFormat_Full) |
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105 { |
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106 Json::Value simplified; |
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107 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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108 call.GetOutput().AnswerJson(simplified); |
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109 } |
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110 else |
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111 { |
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112 call.GetOutput().AnswerJson(dicom); |
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113 } |
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114 } |
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115 |
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116 |
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117 static void ParseSetOfTags(std::set<DicomTag>& target, |
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118 const RestApiGetCall& call, |
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119 const std::string& argument) |
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120 { |
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121 target.clear(); |
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122 |
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123 if (call.HasArgument(argument)) |
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124 { |
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125 std::vector<std::string> tags; |
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126 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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127 |
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128 for (size_t i = 0; i < tags.size(); i++) |
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129 { |
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130 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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131 } |
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132 } |
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133 } |
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134 |
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135 |
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136 // List all the patients, studies, series or instances ---------------------- |
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137 |
| 1354 | 138 static void AnswerListOfResources(RestApiOutput& output, |
| 139 ServerIndex& index, | |
| 140 const std::list<std::string>& resources, | |
| 141 ResourceType level, | |
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142 bool expand, |
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143 DicomToJsonFormat format) |
| 1354 | 144 { |
| 145 Json::Value answer = Json::arrayValue; | |
| 146 | |
| 147 for (std::list<std::string>::const_iterator | |
| 1384 | 148 resource = resources.begin(); resource != resources.end(); ++resource) |
| 1354 | 149 { |
| 150 if (expand) | |
| 151 { | |
| 4554 | 152 Json::Value expanded; |
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153 if (index.ExpandResource(expanded, *resource, level, format)) |
| 1354 | 154 { |
| 4554 | 155 answer.append(expanded); |
| 1354 | 156 } |
| 157 } | |
| 158 else | |
| 159 { | |
| 160 answer.append(*resource); | |
| 161 } | |
| 162 } | |
| 163 | |
| 164 output.AnswerJson(answer); | |
| 165 } | |
| 166 | |
| 167 | |
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168 template <enum ResourceType resourceType> |
| 974 | 169 static void ListResources(RestApiGetCall& call) |
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170 { |
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171 if (call.IsDocumentation()) |
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172 { |
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173 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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174 |
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175 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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176 call.GetDocumentation() |
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177 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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178 .SetSummary("List the available " + resources) |
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179 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
| 4403 | 180 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
| 181 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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182 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
| 4403 | 183 "If present, retrieve detailed information about the individual " + resources, false) |
| 4404 | 184 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 185 "about the reported " + resources + " (if `expand` argument is provided)") | |
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186 .SetHttpGetSample("https://demo.orthanc-server.com/" + resources + "?since=0&limit=2", true); |
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187 return; |
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188 } |
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189 |
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190 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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191 |
| 1354 | 192 std::list<std::string> result; |
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193 |
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194 if (call.HasArgument("limit") || |
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195 call.HasArgument("since")) |
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196 { |
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197 if (!call.HasArgument("limit")) |
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198 { |
| 2955 | 199 throw OrthancException(ErrorCode_BadRequest, |
| 200 "Missing \"limit\" argument for GET request against: " + | |
| 201 call.FlattenUri()); | |
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202 } |
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203 |
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204 if (!call.HasArgument("since")) |
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205 { |
| 2955 | 206 throw OrthancException(ErrorCode_BadRequest, |
| 207 "Missing \"since\" argument for GET request against: " + | |
| 208 call.FlattenUri()); | |
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209 } |
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210 |
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211 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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212 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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213 index.GetAllUuids(result, resourceType, since, limit); |
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214 } |
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215 else |
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216 { |
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217 index.GetAllUuids(result, resourceType); |
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218 } |
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219 |
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220 AnswerListOfResources(call.GetOutput(), index, result, resourceType, call.HasArgument("expand"), |
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221 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human)); |
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222 } |
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223 |
| 4409 | 224 |
| 225 | |
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226 template <enum ResourceType resourceType> |
| 974 | 227 static void GetSingleResource(RestApiGetCall& call) |
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228 { |
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229 if (call.IsDocumentation()) |
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230 { |
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231 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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232 |
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233 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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234 call.GetDocumentation() |
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235 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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236 .SetSummary("Get information about some " + resource) |
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237 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 238 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 4409 | 239 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
| 240 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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241 return; |
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242 } |
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243 |
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244 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
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245 |
| 4554 | 246 Json::Value json; |
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247 if (OrthancRestApi::GetIndex(call).ExpandResource( |
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248 json, call.GetUriComponent("id", ""), resourceType, format)) |
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249 { |
| 4554 | 250 call.GetOutput().AnswerJson(json); |
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251 } |
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252 } |
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253 |
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254 template <enum ResourceType resourceType> |
| 974 | 255 static void DeleteSingleResource(RestApiDeleteCall& call) |
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256 { |
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257 if (call.IsDocumentation()) |
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258 { |
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259 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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260 call.GetDocumentation() |
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261 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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262 .SetSummary("Delete some " + resource) |
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263 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 264 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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265 return; |
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266 } |
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267 |
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268 Json::Value remainingAncestor; |
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269 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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270 { |
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271 call.GetOutput().AnswerJson(remainingAncestor); |
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272 } |
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273 } |
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274 |
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275 |
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276 // Get information about a single patient ----------------------------------- |
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277 |
| 974 | 278 static void IsProtectedPatient(RestApiGetCall& call) |
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279 { |
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280 if (call.IsDocumentation()) |
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281 { |
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282 call.GetDocumentation() |
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283 .SetTag("Patients") |
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284 .SetSummary("Is the patient protected against recycling?") |
| 4404 | 285 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
| 4403 | 286 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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287 return; |
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288 } |
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289 |
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290 std::string publicId = call.GetUriComponent("id", ""); |
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291 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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292 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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293 } |
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294 |
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295 |
| 974 | 296 static void SetPatientProtection(RestApiPutCall& call) |
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297 { |
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298 if (call.IsDocumentation()) |
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299 { |
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300 call.GetDocumentation() |
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301 .SetTag("Patients") |
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302 .SetSummary("Protect one patient against recycling") |
| 4403 | 303 .SetDescription("Check out configuration options `MaximumStorageSize` and `MaximumPatientCount`") |
| 4404 | 304 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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305 return; |
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306 } |
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307 |
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308 ServerContext& context = OrthancRestApi::GetContext(call); |
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309 |
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310 std::string publicId = call.GetUriComponent("id", ""); |
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311 |
|
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312 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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313 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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314 } |
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315 |
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316 |
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317 // Get information about a single instance ---------------------------------- |
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318 |
| 974 | 319 static void GetInstanceFile(RestApiGetCall& call) |
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320 { |
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321 if (call.IsDocumentation()) |
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322 { |
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323 call.GetDocumentation() |
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324 .SetTag("Instances") |
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325 .SetSummary("Download DICOM") |
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326 .SetDescription("Download one DICOM instance") |
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327 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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328 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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329 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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330 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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331 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
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332 return; |
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333 } |
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334 |
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335 ServerContext& context = OrthancRestApi::GetContext(call); |
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336 |
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337 std::string publicId = call.GetUriComponent("id", ""); |
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338 |
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339 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
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340 if (accept != call.GetHttpHeaders().end()) |
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341 { |
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342 // New in Orthanc 1.5.4 |
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343 try |
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344 { |
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345 MimeType mime = StringToMimeType(accept->second.c_str()); |
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346 |
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347 if (mime == MimeType_DicomWebJson || |
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348 mime == MimeType_DicomWebXml) |
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349 { |
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350 DicomWebJsonVisitor visitor; |
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351 |
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352 { |
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353 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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354 locker.GetDicom().Apply(visitor); |
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355 } |
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356 |
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357 if (mime == MimeType_DicomWebJson) |
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358 { |
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359 std::string s = visitor.GetResult().toStyledString(); |
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360 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
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361 } |
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362 else |
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363 { |
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364 std::string xml; |
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365 visitor.FormatXml(xml); |
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366 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
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367 } |
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368 |
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369 return; |
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370 } |
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371 } |
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372 catch (OrthancException&) |
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373 { |
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374 } |
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375 } |
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376 |
|
1146
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377 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
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378 } |
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379 |
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380 |
| 974 | 381 static void ExportInstanceFile(RestApiPostCall& call) |
|
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382 { |
| 4421 | 383 if (call.IsDocumentation()) |
| 384 { | |
| 385 call.GetDocumentation() | |
| 386 .SetTag("Instances") | |
| 387 .SetSummary("Write DICOM onto filesystem") | |
| 388 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running") | |
| 389 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 390 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
| 391 return; | |
| 392 } | |
| 393 | |
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394 ServerContext& context = OrthancRestApi::GetContext(call); |
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395 |
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396 std::string publicId = call.GetUriComponent("id", ""); |
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397 |
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398 std::string dicom; |
| 2124 | 399 context.ReadDicom(dicom, publicId); |
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400 |
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401 std::string target; |
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402 call.BodyToString(target); |
| 2140 | 403 SystemToolbox::WriteFile(dicom, target); |
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404 |
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405 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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406 } |
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407 |
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408 |
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409 template <DicomToJsonFormat format> |
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410 static void GetInstanceTagsInternal(RestApiGetCall& call) |
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411 { |
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412 ServerContext& context = OrthancRestApi::GetContext(call); |
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413 |
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414 std::string publicId = call.GetUriComponent("id", ""); |
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415 |
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416 std::set<DicomTag> ignoreTagLength; |
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417 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
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418 |
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419 if (format != DicomToJsonFormat_Full || |
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420 !ignoreTagLength.empty()) |
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421 { |
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422 Json::Value full; |
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423 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
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424 AnswerDicomAsJson(call, full, format); |
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425 } |
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426 else |
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427 { |
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428 // This path allows one to avoid the JSON decoding if no |
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429 // simplification is asked, and if no "ignore-length" argument |
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430 // is present |
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431 Json::Value full; |
| 2127 | 432 context.ReadDicomAsJson(full, publicId); |
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433 call.GetOutput().AnswerJson(full); |
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434 } |
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435 } |
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436 |
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437 |
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438 static void GetInstanceTags(RestApiGetCall& call) |
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439 { |
| 4404 | 440 if (call.IsDocumentation()) |
| 441 { | |
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442 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 443 call.GetDocumentation() |
| 444 .SetTag("Instances") | |
| 445 .SetSummary("Get DICOM tags") | |
| 446 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
| 447 "combines hexadecimal tags with human-readable description.") | |
| 448 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
|
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449 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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450 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
| 4404 | 451 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
| 4415 | 452 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
| 4404 | 453 return; |
| 454 } | |
| 455 | |
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456 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
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457 { |
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458 case DicomToJsonFormat_Human: |
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459 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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460 break; |
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461 |
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462 case DicomToJsonFormat_Short: |
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463 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call); |
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464 break; |
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465 |
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466 case DicomToJsonFormat_Full: |
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467 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call); |
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468 break; |
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469 |
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470 default: |
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471 throw OrthancException(ErrorCode_InternalError); |
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472 } |
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473 } |
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474 |
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475 |
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476 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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477 { |
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478 if (call.IsDocumentation()) |
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479 { |
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480 call.GetDocumentation() |
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481 .SetTag("Instances") |
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482 .SetSummary("Get human-readable tags") |
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483 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
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484 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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485 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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486 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
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487 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
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488 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
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489 return; |
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490 } |
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491 else |
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492 { |
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493 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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494 } |
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495 } |
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496 |
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497 |
| 974 | 498 static void ListFrames(RestApiGetCall& call) |
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499 { |
| 4414 | 500 if (call.IsDocumentation()) |
| 501 { | |
| 502 call.GetDocumentation() | |
| 503 .SetTag("Instances") | |
| 504 .SetSummary("List available frames") | |
| 505 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
| 506 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 507 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
| 508 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); | |
| 509 return; | |
| 510 } | |
| 511 | |
|
1950
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512 std::string publicId = call.GetUriComponent("id", ""); |
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513 |
|
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514 unsigned int numberOfFrames; |
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515 |
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516 { |
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517 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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518 numberOfFrames = locker.GetDicom().GetFramesCount(); |
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519 } |
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520 |
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521 Json::Value result = Json::arrayValue; |
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522 for (unsigned int i = 0; i < numberOfFrames; i++) |
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523 { |
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524 result.append(i); |
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525 } |
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526 |
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527 call.GetOutput().AnswerJson(result); |
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528 } |
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529 |
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530 |
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531 namespace |
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532 { |
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533 class ImageToEncode |
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534 { |
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535 private: |
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536 std::unique_ptr<ImageAccessor>& image_; |
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537 ImageExtractionMode mode_; |
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538 bool invert_; |
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539 MimeType format_; |
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540 std::string answer_; |
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541 |
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542 public: |
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543 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
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544 ImageExtractionMode mode, |
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545 bool invert) : |
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546 image_(image), |
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547 mode_(mode), |
| 4205 | 548 invert_(invert), |
| 549 format_(MimeType_Binary) | |
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550 { |
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551 } |
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552 |
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553 void Answer(RestApiOutput& output) |
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554 { |
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555 output.AnswerBuffer(answer_, format_); |
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556 } |
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557 |
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558 void EncodeUsingPng() |
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559 { |
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560 format_ = MimeType_Png; |
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561 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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562 } |
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563 |
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564 void EncodeUsingPam() |
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565 { |
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566 format_ = MimeType_Pam; |
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567 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
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568 } |
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569 |
|
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570 void EncodeUsingJpeg(uint8_t quality) |
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571 { |
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572 format_ = MimeType_Jpeg; |
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573 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
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574 } |
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575 }; |
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576 |
|
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577 class EncodePng : public HttpContentNegociation::IHandler |
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578 { |
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579 private: |
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580 ImageToEncode& image_; |
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581 |
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|
582 public: |
| 4205 | 583 explicit EncodePng(ImageToEncode& image) : image_(image) |
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584 { |
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585 } |
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586 |
|
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587 virtual void Handle(const std::string& type, |
| 4205 | 588 const std::string& subtype) ORTHANC_OVERRIDE |
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589 { |
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590 assert(type == "image"); |
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591 assert(subtype == "png"); |
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592 image_.EncodeUsingPng(); |
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593 } |
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594 }; |
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595 |
|
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596 class EncodePam : public HttpContentNegociation::IHandler |
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597 { |
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598 private: |
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599 ImageToEncode& image_; |
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600 |
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601 public: |
| 4205 | 602 explicit EncodePam(ImageToEncode& image) : image_(image) |
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603 { |
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604 } |
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605 |
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|
606 virtual void Handle(const std::string& type, |
| 4205 | 607 const std::string& subtype) ORTHANC_OVERRIDE |
|
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608 { |
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|
609 assert(type == "image"); |
| 2780 | 610 assert(subtype == "x-portable-arbitrarymap"); |
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611 image_.EncodeUsingPam(); |
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612 } |
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613 }; |
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|
614 |
|
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615 class EncodeJpeg : public HttpContentNegociation::IHandler |
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616 { |
|
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617 private: |
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|
618 ImageToEncode& image_; |
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619 unsigned int quality_; |
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620 |
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621 public: |
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622 EncodeJpeg(ImageToEncode& image, |
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623 const RestApiGetCall& call) : |
|
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624 image_(image) |
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625 { |
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626 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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627 bool ok = false; |
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628 |
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629 try |
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630 { |
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631 quality_ = boost::lexical_cast<unsigned int>(v); |
| 1847 | 632 ok = (quality_ >= 1 && quality_ <= 100); |
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633 } |
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634 catch (boost::bad_lexical_cast&) |
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635 { |
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636 } |
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637 |
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638 if (!ok) |
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639 { |
| 2955 | 640 throw OrthancException( |
| 641 ErrorCode_BadRequest, | |
| 642 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
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643 } |
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644 } |
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645 |
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646 virtual void Handle(const std::string& type, |
| 4205 | 647 const std::string& subtype) ORTHANC_OVERRIDE |
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648 { |
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649 assert(type == "image"); |
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650 assert(subtype == "jpeg"); |
|
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651 image_.EncodeUsingJpeg(quality_); |
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652 } |
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653 }; |
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654 } |
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655 |
|
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656 |
|
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657 namespace |
|
3600
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658 { |
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659 class IDecodedFrameHandler : public boost::noncopyable |
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660 { |
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661 public: |
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662 virtual ~IDecodedFrameHandler() |
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663 { |
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664 } |
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665 |
|
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666 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
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667 virtual void Handle(RestApiGetCall& call, |
|
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668 std::unique_ptr<ImageAccessor>& decoded, |
|
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669 const ParsedDicomFile* dicom) = 0; |
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670 |
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671 virtual bool RequiresDicomTags() const = 0; |
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672 |
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673 static void Apply(RestApiGetCall& call, |
|
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674 IDecodedFrameHandler& handler, |
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675 ImageExtractionMode mode /* for generation of documentation */, |
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676 bool isRendered /* for generation of documentation */) |
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677 { |
|
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678 if (call.IsDocumentation()) |
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679 { |
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680 std::string m; |
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681 if (!isRendered) |
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682 { |
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683 switch (mode) |
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684 { |
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685 case ImageExtractionMode_Preview: |
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686 m = "preview"; |
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687 break; |
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688 case ImageExtractionMode_UInt8: |
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689 m = "uint8"; |
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690 break; |
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691 case ImageExtractionMode_UInt16: |
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692 m = "uint16"; |
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693 break; |
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694 case ImageExtractionMode_Int16: |
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695 m = "int16"; |
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696 break; |
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697 default: |
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698 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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699 } |
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700 } |
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701 |
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702 std::string description; |
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703 std::string verb = (isRendered ? "Render" : "Decode"); |
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704 |
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705 if (call.HasUriComponent("frame")) |
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706 { |
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707 description = verb + " one frame of interest from the given DICOM instance."; |
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708 call.GetDocumentation() |
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709 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
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710 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
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711 } |
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712 else |
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713 { |
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714 description = verb + " the first frame of the given DICOM instance."; |
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715 call.GetDocumentation() |
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716 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
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717 } |
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718 |
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719 if (isRendered) |
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720 { |
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721 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
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722 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
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723 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
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724 call.GetDocumentation() |
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725 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
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changeset
|
726 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
727 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
728 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
729 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
730 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
731 else |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
732 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
733 switch (mode) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
734 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
735 case ImageExtractionMode_Preview: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
736 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
737 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
738 case ImageExtractionMode_UInt8: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
739 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
740 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
741 case ImageExtractionMode_UInt16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
742 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
743 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
744 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
745 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
746 "Negative values must be interpreted according to two's complement."); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
747 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
748 default: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
749 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
750 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
751 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
752 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
753 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
754 .SetTag("Instances") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
755 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
756 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
757 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
758 .AddAnswerType(MimeType_Png, "PNG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
759 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
760 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
761 .SetDescription(description); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
762 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
763 return; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
764 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
765 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
766 ServerContext& context = OrthancRestApi::GetContext(call); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
767 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
768 std::string frameId = call.GetUriComponent("frame", "0"); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
769 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
770 unsigned int frame; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
771 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
772 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
773 frame = boost::lexical_cast<unsigned int>(frameId); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
774 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
775 catch (boost::bad_lexical_cast&) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
776 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
777 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
778 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
779 |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
780 std::unique_ptr<ImageAccessor> decoded; |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
781 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
782 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
783 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
784 std::string publicId = call.GetUriComponent("id", ""); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
785 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
786 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
787 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
788 if (decoded.get() == NULL) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
789 { |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
790 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
791 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
792 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
793 |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
794 if (handler.RequiresDicomTags()) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
795 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
796 /** |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
797 * Retrieve a summary of the DICOM tags, which is |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
798 * necessary to deal with MONOCHROME1 photometric |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
799 * interpretation, and with windowing parameters. |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
800 **/ |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
801 ServerContext::DicomCacheLocker locker(context, publicId); |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
802 handler.Handle(call, decoded, &locker.GetDicom()); |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
803 } |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
804 else |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
805 { |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
806 handler.Handle(call, decoded, NULL); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
807 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
808 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
809 catch (OrthancException& e) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
810 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
811 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
812 e.GetErrorCode() == ErrorCode_UnknownResource) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
813 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
814 // The frame number is out of the range for this DICOM |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
815 // instance, the resource is not existent |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
816 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
817 else |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
818 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
819 std::string root = ""; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
820 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
821 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
822 root += "../"; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
823 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
824 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
825 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
826 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
827 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
828 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
829 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
830 } |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
831 |
|
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832 |
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833 static void DefaultHandler(RestApiGetCall& call, |
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834 std::unique_ptr<ImageAccessor>& decoded, |
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835 ImageExtractionMode mode, |
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836 bool invert) |
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837 { |
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838 ImageToEncode image(decoded, mode, invert); |
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839 |
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840 HttpContentNegociation negociation; |
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841 EncodePng png(image); |
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842 negociation.Register(MIME_PNG, png); |
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843 |
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844 EncodeJpeg jpeg(image, call); |
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845 negociation.Register(MIME_JPEG, jpeg); |
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846 |
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847 EncodePam pam(image); |
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848 negociation.Register(MIME_PAM, pam); |
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849 |
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850 if (negociation.Apply(call.GetHttpHeaders())) |
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851 { |
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852 image.Answer(call.GetOutput()); |
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853 } |
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854 } |
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855 }; |
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856 |
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857 |
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858 class GetImageHandler : public IDecodedFrameHandler |
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859 { |
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860 private: |
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861 ImageExtractionMode mode_; |
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862 |
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863 public: |
| 4205 | 864 explicit GetImageHandler(ImageExtractionMode mode) : |
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865 mode_(mode) |
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866 { |
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867 } |
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868 |
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869 virtual void Handle(RestApiGetCall& call, |
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870 std::unique_ptr<ImageAccessor>& decoded, |
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871 const ParsedDicomFile* dicom) ORTHANC_OVERRIDE |
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872 { |
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873 bool invert = false; |
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874 |
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875 if (mode_ == ImageExtractionMode_Preview) |
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876 { |
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877 if (dicom == NULL) |
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878 { |
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879 throw OrthancException(ErrorCode_InternalError); |
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880 } |
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881 |
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882 DicomMap tags; |
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883 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
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884 |
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885 DicomImageInformation info(tags); |
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886 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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887 } |
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888 |
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889 DefaultHandler(call, decoded, mode_, invert); |
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890 } |
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891 |
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892 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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893 { |
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894 return mode_ == ImageExtractionMode_Preview; |
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895 } |
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896 }; |
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897 |
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898 |
|
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899 class RenderedFrameHandler : public IDecodedFrameHandler |
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900 { |
|
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901 private: |
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902 static void GetDicomParameters(bool& invert, |
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903 float& rescaleSlope, |
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904 float& rescaleIntercept, |
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905 float& windowWidth, |
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906 float& windowCenter, |
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907 const ParsedDicomFile& dicom) |
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908 { |
|
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909 DicomMap tags; |
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910 OrthancConfiguration::DefaultExtractDicomSummary(tags, dicom); |
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911 |
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912 DicomImageInformation info(tags); |
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913 |
|
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914 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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915 |
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916 rescaleSlope = 1.0f; |
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917 rescaleIntercept = 0.0f; |
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918 |
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919 if (dicom.HasTag(Orthanc::DICOM_TAG_RESCALE_SLOPE) && |
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920 dicom.HasTag(Orthanc::DICOM_TAG_RESCALE_INTERCEPT)) |
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921 { |
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922 tags.ParseFloat(rescaleSlope, Orthanc::DICOM_TAG_RESCALE_SLOPE); |
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923 tags.ParseFloat(rescaleIntercept, Orthanc::DICOM_TAG_RESCALE_INTERCEPT); |
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924 } |
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925 |
|
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926 windowWidth = static_cast<float>(1 << info.GetBitsStored()) * rescaleSlope; |
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927 windowCenter = windowWidth / 2.0f + rescaleIntercept; |
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928 |
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929 if (tags.HasTag(Orthanc::DICOM_TAG_WINDOW_CENTER) && |
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930 tags.HasTag(Orthanc::DICOM_TAG_WINDOW_WIDTH)) |
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931 { |
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932 tags.ParseFirstFloat(windowCenter, Orthanc::DICOM_TAG_WINDOW_CENTER); |
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933 tags.ParseFirstFloat(windowWidth, Orthanc::DICOM_TAG_WINDOW_WIDTH); |
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934 } |
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935 } |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
936 |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
937 static void GetUserArguments(float& windowWidth /* inout */, |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
938 float& windowCenter /* inout */, |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
939 unsigned int& argWidth, |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
940 unsigned int& argHeight, |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
941 bool& smooth, |
| 4205 | 942 const RestApiGetCall& call) |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
943 { |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
944 static const char* ARG_WINDOW_CENTER = "window-center"; |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
945 static const char* ARG_WINDOW_WIDTH = "window-width"; |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
946 static const char* ARG_WIDTH = "width"; |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
947 static const char* ARG_HEIGHT = "height"; |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
948 static const char* ARG_SMOOTH = "smooth"; |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
949 |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
950 if (call.HasArgument(ARG_WINDOW_WIDTH)) |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
951 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
952 try |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
953 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
954 windowWidth = boost::lexical_cast<float>(call.GetArgument(ARG_WINDOW_WIDTH, "")); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
955 } |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
956 catch (boost::bad_lexical_cast&) |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
957 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
958 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
959 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
960 } |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
961 } |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
962 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
963 if (call.HasArgument(ARG_WINDOW_CENTER)) |
|
3683
12253ddefe5a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
964 { |
|
3685
2cc34837d694
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
965 try |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
966 { |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
967 windowCenter = boost::lexical_cast<float>(call.GetArgument(ARG_WINDOW_CENTER, "")); |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
968 } |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
969 catch (boost::bad_lexical_cast&) |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
970 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
971 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
972 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
|
2cc34837d694
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parents:
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diff
changeset
|
973 } |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
974 } |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
975 |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
976 argWidth = 0; |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
977 argHeight = 0; |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
978 |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
979 if (call.HasArgument(ARG_WIDTH)) |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
980 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
981 try |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
982 { |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
983 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
984 if (tmp < 0) |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
985 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
986 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
987 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
988 } |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
989 else |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
990 { |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
991 argWidth = static_cast<unsigned int>(tmp); |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
992 } |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
993 } |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
994 catch (boost::bad_lexical_cast&) |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
995 { |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
996 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
997 "Bad value for argument: " + std::string(ARG_WIDTH)); |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
998 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
999 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1000 |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1001 if (call.HasArgument(ARG_HEIGHT)) |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1002 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1003 try |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1004 { |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1005 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
|
3685
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1006 if (tmp < 0) |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1007 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1008 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1009 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1010 } |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1011 else |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1012 { |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
1013 argHeight = static_cast<unsigned int>(tmp); |
|
3685
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rendering of RGB24
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diff
changeset
|
1014 } |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1015 } |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
1016 catch (boost::bad_lexical_cast&) |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
1017 { |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1018 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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3687
diff
changeset
|
1019 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
|
3685
2cc34837d694
rendering of RGB24
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diff
changeset
|
1020 } |
|
2cc34837d694
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parents:
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diff
changeset
|
1021 } |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
1022 |
|
3690
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changeset
|
1023 smooth = false; |
|
3685
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diff
changeset
|
1024 |
|
2cc34837d694
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3683
diff
changeset
|
1025 if (call.HasArgument(ARG_SMOOTH)) |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
1026 { |
|
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4460
diff
changeset
|
1027 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
|
3685
2cc34837d694
rendering of RGB24
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diff
changeset
|
1028 } |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1029 } |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1030 |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1031 |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1032 public: |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1033 virtual void Handle(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
1034 std::unique_ptr<ImageAccessor>& decoded, |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1035 const ParsedDicomFile* dicom) ORTHANC_OVERRIDE |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1036 { |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1037 if (dicom == NULL) |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1038 { |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1039 throw OrthancException(ErrorCode_InternalError); |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1040 } |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1041 |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1042 bool invert; |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1043 float rescaleSlope, rescaleIntercept, windowWidth, windowCenter; |
|
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|
1044 GetDicomParameters(invert, rescaleSlope, rescaleIntercept, windowWidth, windowCenter, *dicom); |
| 3686 | 1045 |
|
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|
1046 unsigned int argWidth, argHeight; |
|
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|
1047 bool smooth; |
|
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|
1048 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
|
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|
1049 |
|
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|
1050 unsigned int targetWidth = decoded->GetWidth(); |
|
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|
1051 unsigned int targetHeight = decoded->GetHeight(); |
| 3686 | 1052 |
| 1053 if (decoded->GetWidth() != 0 && | |
| 1054 decoded->GetHeight() != 0) | |
| 1055 { | |
| 1056 float ratio = 1; | |
| 1057 | |
|
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1058 if (argWidth != 0 && |
|
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|
1059 argHeight != 0) |
| 3686 | 1060 { |
|
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|
1061 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
|
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1062 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
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|
1063 ratio = std::min(ratioX, ratioY); |
| 3686 | 1064 } |
|
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|
1065 else if (argWidth != 0) |
| 3686 | 1066 { |
|
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|
1067 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
| 3686 | 1068 } |
|
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changeset
|
1069 else if (argHeight != 0) |
|
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|
1070 { |
|
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|
1071 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
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|
1072 } |
|
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|
1073 |
|
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1074 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
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1075 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
| 3686 | 1076 } |
| 1077 | |
|
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1078 if (decoded->GetFormat() == PixelFormat_RGB24) |
|
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1079 { |
|
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1080 if (targetWidth == decoded->GetWidth() && |
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1081 targetHeight == decoded->GetHeight()) |
|
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1082 { |
|
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1083 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
|
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1084 } |
|
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1085 else |
|
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1086 { |
|
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|
1087 std::unique_ptr<ImageAccessor> resized( |
|
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1088 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
|
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1089 |
|
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|
1090 if (smooth && |
|
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1091 (targetWidth < decoded->GetWidth() || |
|
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|
1092 targetHeight < decoded->GetHeight())) |
|
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|
1093 { |
|
4065
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changeset
|
1094 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
|
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|
1095 } |
|
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changeset
|
1096 |
|
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changeset
|
1097 ImageProcessing::Resize(*resized, *decoded); |
|
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|
1098 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
|
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1099 } |
|
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|
1100 } |
| 3686 | 1101 else |
| 1102 { | |
|
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|
1103 // Grayscale image: (1) convert to Float32, (2) apply |
|
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|
1104 // windowing to get a Grayscale8, (3) possibly resize |
|
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changeset
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1105 |
|
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changeset
|
1106 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
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|
1107 ImageProcessing::Convert(converted, *decoded); |
|
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1108 |
|
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|
1109 // Avoid divisions by zero |
|
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|
1110 if (windowWidth <= 1.0f) |
|
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|
1111 { |
|
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|
1112 windowWidth = 1; |
|
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|
1113 } |
|
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changeset
|
1114 |
|
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1115 if (std::abs(rescaleSlope) <= 0.1f) |
|
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|
1116 { |
|
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|
1117 rescaleSlope = 0.1f; |
|
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1118 } |
|
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1119 |
|
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1120 const float scaling = 255.0f * rescaleSlope / windowWidth; |
|
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1121 const float offset = (rescaleIntercept - windowCenter + windowWidth / 2.0f) / rescaleSlope; |
|
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1122 |
|
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|
1123 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
|
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|
1124 ImageProcessing::ShiftScale(*rescaled, converted, offset, scaling, false); |
|
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1125 |
|
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1126 if (targetWidth == decoded->GetWidth() && |
|
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1127 targetHeight == decoded->GetHeight()) |
|
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|
1128 { |
|
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|
1129 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
|
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1130 } |
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1131 else |
|
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1132 { |
|
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|
1133 std::unique_ptr<ImageAccessor> resized( |
|
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1134 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
|
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1135 |
|
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|
1136 if (smooth && |
|
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1137 (targetWidth < decoded->GetWidth() || |
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1138 targetHeight < decoded->GetHeight())) |
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|
1139 { |
|
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|
1140 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
|
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1141 } |
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|
1142 |
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|
1143 ImageProcessing::Resize(*resized, *rescaled); |
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|
1144 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
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|
1145 } |
| 3686 | 1146 } |
|
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1147 } |
|
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1148 |
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1149 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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1150 { |
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|
1151 return true; |
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changeset
|
1152 } |
|
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|
1153 }; |
|
3600
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diff
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|
1154 } |
|
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
1155 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1156 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1157 template <enum ImageExtractionMode mode> |
| 974 | 1158 static void GetImage(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1159 { |
|
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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3816
diff
changeset
|
1160 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3816
diff
changeset
|
1161 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1162 GetImageHandler handler(mode); |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
1163 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1164 } |
|
1906
d7c1cb559431
optimization for multi-frame images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1902
diff
changeset
|
1165 |
|
1826
ac5b0b4e2434
refactoring of DicomImageDecoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1824
diff
changeset
|
1166 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1167 static void GetRenderedFrame(RestApiGetCall& call) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1168 { |
|
3926
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Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3816
diff
changeset
|
1169 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3816
diff
changeset
|
1170 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1171 RenderedFrameHandler handler; |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
1172 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1173 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1174 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1175 |
| 974 | 1176 static void GetMatlabImage(RestApiGetCall& call) |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1177 { |
| 4414 | 1178 if (call.IsDocumentation()) |
| 1179 { | |
| 1180 std::string description; | |
| 1181 | |
| 1182 if (call.HasUriComponent("frame")) | |
| 1183 { | |
| 1184 description = "Decode one frame of interest from the given DICOM instance"; | |
| 1185 call.GetDocumentation() | |
| 1186 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
| 1187 } | |
| 1188 else | |
| 1189 { | |
| 1190 description = "Decode the first frame of the given DICOM instance."; | |
| 1191 } | |
| 1192 | |
| 1193 call.GetDocumentation() | |
| 1194 .SetTag("Instances") | |
| 1195 .SetSummary("Decode frame for Matlab") | |
| 1196 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
| 1197 "https://book.orthanc-server.com/faq/matlab.html") | |
| 1198 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 1199 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
| 1200 return; | |
| 1201 } | |
| 1202 | |
|
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3816
diff
changeset
|
1203 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
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parents:
3816
diff
changeset
|
1204 |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1205 ServerContext& context = OrthancRestApi::GetContext(call); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1206 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1207 std::string frameId = call.GetUriComponent("frame", "0"); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1208 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1209 unsigned int frame; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1210 try |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1211 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1212 frame = boost::lexical_cast<unsigned int>(frameId); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1213 } |
|
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2804
diff
changeset
|
1214 catch (boost::bad_lexical_cast&) |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1215 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1216 return; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1217 } |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1218 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1219 std::string publicId = call.GetUriComponent("id", ""); |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1220 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1221 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1222 if (decoded.get() == NULL) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1223 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1224 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1225 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1226 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1227 else |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1228 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1229 std::string result; |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1230 decoded->ToMatlabString(result); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1231 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1232 } |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1233 } |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1234 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1235 |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1236 template <bool GzipCompression> |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1237 static void GetRawFrame(RestApiGetCall& call) |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1238 { |
| 4408 | 1239 if (call.IsDocumentation()) |
| 1240 { | |
| 1241 call.GetDocumentation() | |
| 1242 .SetTag("Instances") | |
| 1243 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
| 1244 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
| 1245 "bypassing image decoding. This is notably useful to access the source files " | |
| 1246 "in compressed transfer syntaxes." + | |
| 1247 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
1248 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
| 4408 | 1249 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
| 1250 | |
| 1251 if (GzipCompression) | |
| 1252 { | |
| 1253 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
| 1254 } | |
| 1255 else | |
| 1256 { | |
| 1257 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
| 1258 } | |
| 1259 return; | |
| 1260 } | |
| 1261 | |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1262 std::string frameId = call.GetUriComponent("frame", "0"); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1263 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1264 unsigned int frame; |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1265 try |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1266 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1267 frame = boost::lexical_cast<unsigned int>(frameId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1268 } |
|
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2804
diff
changeset
|
1269 catch (boost::bad_lexical_cast&) |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1270 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1271 return; |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1272 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1273 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1274 std::string publicId = call.GetUriComponent("id", ""); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
1275 std::string raw; |
|
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
1276 MimeType mime; |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1277 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1278 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1279 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1280 locker.GetDicom().GetRawFrame(raw, mime, frame); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1281 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1282 |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1283 if (GzipCompression) |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1284 { |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1285 GzipCompressor gzip; |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1286 std::string compressed; |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1287 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
1288 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1289 } |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1290 else |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1291 { |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1292 call.GetOutput().AnswerBuffer(raw, mime); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1293 } |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1294 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1295 |
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1296 |
| 974 | 1297 static void GetResourceStatistics(RestApiGetCall& call) |
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1298 { |
| 4418 | 1299 if (call.IsDocumentation()) |
| 1300 { | |
| 1301 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1302 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1303 call.GetDocumentation() | |
| 1304 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1305 .SetSummary("Get " + r + " statistics") | |
| 1306 .SetDescription("Get statistics about the given " + r) | |
| 1307 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1308 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
| 1309 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1310 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1311 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
| 1312 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1313 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1314 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1315 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
| 1316 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
| 1317 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
| 1318 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1319 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1320 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1321 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1322 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1323 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1324 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1325 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
| 1326 | |
| 1327 switch (t) | |
| 1328 { | |
| 1329 // Do NOT add "break" below this point! | |
| 1330 case ResourceType_Patient: | |
| 1331 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
| 1332 "Number of child studies within this " + r); | |
| 1333 | |
| 1334 case ResourceType_Study: | |
| 1335 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
| 1336 "Number of child series within this " + r); | |
| 1337 | |
| 1338 case ResourceType_Series: | |
| 1339 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
| 1340 "Number of child instances within this " + r); | |
| 1341 | |
| 1342 case ResourceType_Instance: | |
| 1343 default: | |
| 1344 break; | |
| 1345 } | |
| 1346 | |
| 1347 return; | |
| 1348 } | |
| 1349 | |
|
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1350 static const uint64_t MEGA_BYTES = 1024 * 1024; |
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1351 |
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1352 std::string publicId = call.GetUriComponent("id", ""); |
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1353 |
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1354 ResourceType type; |
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1355 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
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1356 unsigned int countStudies, countSeries, countInstances; |
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1357 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
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1358 type, diskSize, uncompressedSize, countStudies, countSeries, |
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1359 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
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1360 |
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1361 Json::Value result = Json::objectValue; |
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1362 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1363 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1364 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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1365 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
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1366 |
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1367 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
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1368 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1369 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
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1370 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
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1371 |
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1372 switch (type) |
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1373 { |
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1374 // Do NOT add "break" below this point! |
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1375 case ResourceType_Patient: |
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1376 result["CountStudies"] = countStudies; |
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1377 |
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1378 case ResourceType_Study: |
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1379 result["CountSeries"] = countSeries; |
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1380 |
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1381 case ResourceType_Series: |
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1382 result["CountInstances"] = countInstances; |
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1383 |
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1384 case ResourceType_Instance: |
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1385 default: |
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1386 break; |
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1387 } |
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1388 |
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1389 call.GetOutput().AnswerJson(result); |
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1390 } |
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1391 |
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1392 |
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1393 |
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1394 // Handling of metadata ----------------------------------------------------- |
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1395 |
| 4205 | 1396 static void CheckValidResourceType(const RestApiCall& call) |
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1397 { |
|
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1398 assert(!call.GetFullUri().empty()); |
| 4409 | 1399 const std::string resourceType = call.GetFullUri() [0]; |
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1400 StringToResourceType(resourceType.c_str()); |
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1401 } |
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1402 |
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1403 |
| 974 | 1404 static void ListMetadata(RestApiGetCall& call) |
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1405 { |
| 4414 | 1406 if (call.IsDocumentation()) |
| 1407 { | |
| 1408 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1409 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1410 call.GetDocumentation() | |
| 1411 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1412 .SetSummary("List metadata") | |
| 1413 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
| 1414 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1415 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
| 1416 "If present, also retrieve the value of the individual metadata", false) | |
| 1417 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " | |
| 1418 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
| 1419 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
| 1420 return; | |
| 1421 } | |
| 1422 | |
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1423 assert(!call.GetFullUri().empty()); |
| 4554 | 1424 const std::string publicId = call.GetUriComponent("id", ""); |
| 1425 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
|
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1426 |
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1427 typedef std::map<MetadataType, std::string> Metadata; |
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1428 |
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1429 Metadata metadata; |
| 4554 | 1430 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
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1431 |
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1432 Json::Value result; |
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1433 |
|
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1434 if (call.HasArgument("expand")) |
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1435 { |
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1436 result = Json::objectValue; |
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1437 |
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1438 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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1439 { |
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1440 std::string key = EnumerationToString(it->first); |
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1441 result[key] = it->second; |
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1442 } |
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1443 } |
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1444 else |
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1445 { |
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1446 result = Json::arrayValue; |
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1447 |
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1448 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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1449 { |
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1450 result.append(EnumerationToString(it->first)); |
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1451 } |
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1452 } |
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1453 |
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1454 call.GetOutput().AnswerJson(result); |
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1455 } |
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1456 |
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1457 |
| 4657 | 1458 static void SetStringContentETag(const RestApiOutput& output, |
| 1459 int64_t revision, | |
| 1460 const std::string& value) | |
|
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1461 { |
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1462 std::string md5; |
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1463 Toolbox::ComputeMD5(md5, value); |
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1464 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1465 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1466 } |
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1467 |
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1468 |
| 4657 | 1469 static void SetBufferContentETag(const RestApiOutput& output, |
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1470 int64_t revision, |
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1471 const void* data, |
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1472 size_t size) |
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1473 { |
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1474 std::string md5; |
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1475 Toolbox::ComputeMD5(md5, data, size); |
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1476 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1477 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1478 } |
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1479 |
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1480 |
| 4657 | 1481 static void SetAttachmentETag(const RestApiOutput& output, |
|
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1482 int64_t revision, |
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1483 const FileInfo& info) |
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1484 { |
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1485 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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1486 info.GetUncompressedMD5() + "\""); |
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1487 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1488 } |
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1489 |
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1490 |
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1491 static std::string GetMD5(const std::string& value) |
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1492 { |
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1493 std::string md5; |
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1494 Toolbox::ComputeMD5(md5, value); |
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1495 return md5; |
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1496 } |
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1497 |
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1498 |
|
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1499 static bool GetRevisionHeader(int64_t& revision /* out */, |
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1500 std::string& md5 /* out */, |
|
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1501 const RestApiCall& call, |
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1502 const std::string& header) |
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1503 { |
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1504 std::string lower; |
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1505 Toolbox::ToLowerCase(lower, header); |
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1506 |
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1507 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1508 if (found == call.GetHttpHeaders().end()) |
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1509 { |
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1510 return false; |
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1511 } |
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1512 else |
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1513 { |
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1514 std::string value = Toolbox::StripSpaces(found->second); |
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1515 Toolbox::RemoveSurroundingQuotes(value); |
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1516 |
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1517 try |
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1518 { |
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1519 size_t comma = value.find('-'); |
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1520 if (comma != std::string::npos) |
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1521 { |
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1522 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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1523 md5 = value.substr(comma + 1); |
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1524 return true; |
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1525 } |
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1526 } |
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1527 catch (boost::bad_lexical_cast&) |
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1528 { |
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1529 } |
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1530 |
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1531 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1532 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
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1533 } |
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1534 } |
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1535 |
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1536 |
| 974 | 1537 static void GetMetadata(RestApiGetCall& call) |
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1538 { |
| 4414 | 1539 if (call.IsDocumentation()) |
| 1540 { | |
| 1541 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1542 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1543 call.GetDocumentation() | |
| 1544 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1545 .SetSummary("Get metadata") | |
| 1546 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
| 1547 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1548 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1549 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1550 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1551 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4414 | 1552 return; |
| 1553 } | |
| 1554 | |
|
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1555 assert(!call.GetFullUri().empty()); |
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1556 const std::string publicId = call.GetUriComponent("id", ""); |
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1557 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1558 |
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1559 std::string name = call.GetUriComponent("name", ""); |
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1560 MetadataType metadata = StringToMetadata(name); |
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1561 |
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1562 std::string value; |
|
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1563 int64_t revision; |
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1564 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1565 { |
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1566 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
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1567 |
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1568 int64_t userRevision; |
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1569 std::string userMD5; |
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1570 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1571 userRevision == revision && |
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1572 userMD5 == GetMD5(value)) |
|
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1573 { |
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1574 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
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1575 } |
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1576 else |
|
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1577 { |
|
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1578 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
|
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1579 } |
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1580 } |
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1581 } |
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1582 |
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1583 |
| 974 | 1584 static void DeleteMetadata(RestApiDeleteCall& call) |
|
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1585 { |
| 4414 | 1586 if (call.IsDocumentation()) |
| 1587 { | |
| 1588 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1589 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1590 call.GetDocumentation() | |
| 1591 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1592 .SetSummary("Delete metadata") | |
| 1593 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
| 1594 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
| 1595 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
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1596 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
|
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1597 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
|
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1598 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4414 | 1599 return; |
| 1600 } | |
| 1601 | |
|
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1602 CheckValidResourceType(call); |
|
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1603 const std::string publicId = call.GetUriComponent("id", ""); |
|
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1604 |
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1605 std::string name = call.GetUriComponent("name", ""); |
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1606 MetadataType metadata = StringToMetadata(name); |
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1607 |
|
1773
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1608 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
|
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1609 { |
|
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1610 bool found; |
|
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1611 int64_t revision; |
|
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1612 std::string md5; |
|
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1613 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
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1614 { |
|
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1615 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
|
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1616 } |
|
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1617 else |
|
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1618 { |
|
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1619 OrthancConfiguration::ReaderLock lock; |
|
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1620 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
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|
1621 { |
|
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|
1622 throw OrthancException(ErrorCode_Revision, |
|
4661
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|
1623 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
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1624 } |
|
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1625 else |
|
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1626 { |
|
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|
1627 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
|
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1628 } |
|
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1629 } |
|
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|
1630 |
|
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|
1631 if (found) |
|
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|
1632 { |
|
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1633 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
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1634 } |
|
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1635 else |
|
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1636 { |
|
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1637 throw OrthancException(ErrorCode_UnknownResource); |
|
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1638 } |
|
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1639 } |
|
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|
1640 else |
|
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|
1641 { |
|
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|
1642 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
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|
1643 } |
|
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1644 } |
|
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|
1645 |
|
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|
1646 |
| 974 | 1647 static void SetMetadata(RestApiPutCall& call) |
|
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|
1648 { |
| 4414 | 1649 if (call.IsDocumentation()) |
| 1650 { | |
| 1651 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1652 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1653 call.GetDocumentation() | |
| 1654 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1655 .SetSummary("Set metadata") | |
| 1656 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
| 1657 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
| 1658 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1659 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
|
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1660 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
|
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1661 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
| 4414 | 1662 return; |
| 1663 } | |
| 1664 | |
|
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|
1665 CheckValidResourceType(call); |
|
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|
1666 |
|
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|
1667 std::string publicId = call.GetUriComponent("id", ""); |
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|
1668 std::string name = call.GetUriComponent("name", ""); |
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|
1669 MetadataType metadata = StringToMetadata(name); |
|
1446
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|
1670 |
|
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1437
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|
1671 std::string value; |
|
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1437
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|
1672 call.BodyToString(value); |
|
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1673 |
|
1773
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|
1674 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
|
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|
1675 { |
|
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|
1676 int64_t oldRevision; |
|
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|
1677 std::string oldMD5; |
|
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|
1678 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
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1679 |
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1680 if (!hasOldRevision) |
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1681 { |
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|
1682 OrthancConfiguration::ReaderLock lock; |
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1683 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1684 { |
|
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|
1685 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
|
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|
1686 // the actual value of "oldRevision" if the metadata is |
|
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1687 // inexistent as expected |
|
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1688 hasOldRevision = true; |
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|
1689 oldRevision = -1; // dummy value |
|
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|
1690 oldMD5.clear(); // dummy value |
|
4623
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1691 } |
|
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1692 } |
|
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1693 |
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|
1694 int64_t newRevision; |
|
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|
1695 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
|
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|
1696 hasOldRevision, oldRevision, oldMD5); |
|
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1697 |
|
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|
1698 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
|
2908
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|
1699 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
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1700 } |
|
2128
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1701 else |
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1702 { |
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1703 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1704 } |
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1705 } |
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1706 |
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1707 |
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1708 |
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1709 |
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1710 // Handling of attached files ----------------------------------------------- |
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1711 |
| 974 | 1712 static void ListAttachments(RestApiGetCall& call) |
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1713 { |
| 4409 | 1714 if (call.IsDocumentation()) |
| 1715 { | |
| 1716 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1717 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1718 call.GetDocumentation() | |
| 1719 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1720 .SetSummary("List attachments") | |
| 1721 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
| 1722 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1723 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") | |
| 1724 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
| 1725 return; | |
| 1726 } | |
| 1727 | |
| 1728 const std::string resourceType = call.GetFullUri() [0]; | |
| 1729 const std::string publicId = call.GetUriComponent("id", ""); | |
|
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1730 std::set<FileContentType> attachments; |
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1731 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
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1732 |
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1733 Json::Value result = Json::arrayValue; |
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1734 |
|
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1735 for (std::set<FileContentType>::const_iterator |
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1736 it = attachments.begin(); it != attachments.end(); ++it) |
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1737 { |
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1738 result.append(EnumerationToString(*it)); |
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1739 } |
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1740 |
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1741 call.GetOutput().AnswerJson(result); |
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1742 } |
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1743 |
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1744 |
|
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1745 static void AddAttachmentDocumentation(RestApiGetCall& call, |
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1746 const std::string& resourceType) |
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1747 { |
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1748 call.GetDocumentation() |
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1749 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
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1750 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
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1751 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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1752 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
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1753 } |
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1754 |
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1755 |
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1756 static bool GetAttachmentInfo(FileInfo& info, |
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1757 RestApiGetCall& call) |
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1758 { |
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1759 CheckValidResourceType(call); |
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1760 |
|
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1761 const std::string publicId = call.GetUriComponent("id", ""); |
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1762 const std::string name = call.GetUriComponent("name", ""); |
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1763 FileContentType contentType = StringToContentType(name); |
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1764 |
|
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1765 int64_t revision; |
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1766 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
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1767 { |
|
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1768 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
|
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1769 |
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1770 int64_t userRevision; |
|
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1771 std::string userMD5; |
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1772 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1773 revision == userRevision && |
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1774 info.GetUncompressedMD5() == userMD5) |
|
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1775 { |
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1776 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1777 return false; |
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1778 } |
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1779 else |
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1780 { |
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1781 return true; |
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1782 } |
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1783 } |
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1784 else |
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1785 { |
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1786 throw OrthancException(ErrorCode_UnknownResource); |
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1787 } |
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1788 } |
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1789 |
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1790 |
| 974 | 1791 static void GetAttachmentOperations(RestApiGetCall& call) |
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1792 { |
| 4409 | 1793 if (call.IsDocumentation()) |
| 1794 { | |
| 1795 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1796 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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1797 AddAttachmentDocumentation(call, r); |
| 4409 | 1798 call.GetDocumentation() |
| 1799 .SetTag("Other") | |
| 4414 | 1800 .SetSummary("List operations on attachments") |
| 1801 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
| 4409 | 1802 .AddAnswerType(MimeType_Json, "List of the available operations") |
| 1803 .SetHttpGetSample("https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2/attachments/dicom", true); | |
| 1804 return; | |
| 1805 } | |
| 1806 | |
|
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1807 FileInfo info; |
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1808 if (GetAttachmentInfo(info, call)) |
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1809 { |
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1810 Json::Value operations = Json::arrayValue; |
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1811 |
|
1700
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1812 operations.append("compress"); |
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1813 operations.append("compressed-data"); |
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1814 |
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1815 if (info.GetCompressedMD5() != "") |
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1816 { |
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1817 operations.append("compressed-md5"); |
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1818 } |
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1819 |
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1820 operations.append("compressed-size"); |
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1821 operations.append("data"); |
|
1700
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1822 operations.append("is-compressed"); |
|
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1823 |
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1824 if (info.GetUncompressedMD5() != "") |
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1825 { |
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1826 operations.append("md5"); |
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1827 } |
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1828 |
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1829 operations.append("size"); |
|
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1830 operations.append("uncompress"); |
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1831 |
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1832 if (info.GetCompressedMD5() != "" && |
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1833 info.GetUncompressedMD5() != "") |
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1834 { |
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1835 operations.append("verify-md5"); |
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1836 } |
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1837 |
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1838 call.GetOutput().AnswerJson(operations); |
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1839 } |
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1840 } |
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1841 |
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1842 |
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1843 template <int uncompress> |
| 974 | 1844 static void GetAttachmentData(RestApiGetCall& call) |
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1845 { |
| 4409 | 1846 if (call.IsDocumentation()) |
| 1847 { | |
| 1848 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1849 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1850 call.GetDocumentation() | |
| 1851 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1852 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
| 1853 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
| 4418 | 1854 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
| 4409 | 1855 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 1856 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
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1857 .AddAnswerType(MimeType_Binary, "The attachment") |
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1858 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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1859 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4409 | 1860 return; |
| 1861 } | |
| 1862 | |
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1863 ServerContext& context = OrthancRestApi::GetContext(call); |
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1864 |
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1865 CheckValidResourceType(call); |
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1866 |
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1867 std::string publicId = call.GetUriComponent("id", ""); |
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1868 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
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1869 |
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1870 FileInfo info; |
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1871 if (GetAttachmentInfo(info, call)) |
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1872 { |
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1873 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
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1874 |
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1875 if (uncompress) |
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1876 { |
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1877 context.AnswerAttachment(call.GetOutput(), publicId, type); |
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1878 } |
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1879 else |
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1880 { |
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1881 // Return the raw data (possibly compressed), as stored on the filesystem |
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1882 std::string content; |
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1883 int64_t revision; |
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1884 context.ReadAttachment(content, revision, publicId, type, false); |
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1885 |
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1886 int64_t userRevision; |
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1887 std::string userMD5; |
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1888 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1889 revision == userRevision && |
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1890 info.GetUncompressedMD5() == userMD5) |
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1891 { |
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1892 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1893 } |
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1894 else |
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1895 { |
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1896 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
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1897 } |
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1898 } |
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1899 } |
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1900 } |
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1901 |
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1902 |
| 974 | 1903 static void GetAttachmentSize(RestApiGetCall& call) |
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1904 { |
| 4409 | 1905 if (call.IsDocumentation()) |
| 1906 { | |
| 1907 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1908 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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1909 AddAttachmentDocumentation(call, r); |
| 4409 | 1910 call.GetDocumentation() |
| 1911 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1912 .SetSummary("Get size of attachment") | |
| 1913 .SetDescription("Get the size of one attachment associated with the given " + r) | |
| 1914 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
| 1915 return; | |
| 1916 } | |
| 1917 | |
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1918 FileInfo info; |
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1919 if (GetAttachmentInfo(info, call)) |
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1920 { |
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1921 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
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1922 } |
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1923 } |
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1924 |
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1925 |
| 974 | 1926 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
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1927 { |
| 4409 | 1928 if (call.IsDocumentation()) |
| 1929 { | |
| 1930 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1931 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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1932 AddAttachmentDocumentation(call, r); |
| 4409 | 1933 call.GetDocumentation() |
| 1934 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 4410 | 1935 .SetSummary("Get size of attachment on disk") |
| 4409 | 1936 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
| 4413 | 1937 "This is different from `.../size` iff `EnableStorage` is `true`.") |
| 4410 | 1938 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
| 4409 | 1939 return; |
| 1940 } | |
| 1941 | |
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1942 FileInfo info; |
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1943 if (GetAttachmentInfo(info, call)) |
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1944 { |
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1945 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
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1946 } |
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1947 } |
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1948 |
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1949 |
| 974 | 1950 static void GetAttachmentMD5(RestApiGetCall& call) |
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1951 { |
| 4410 | 1952 if (call.IsDocumentation()) |
| 1953 { | |
| 1954 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1955 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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1956 AddAttachmentDocumentation(call, r); |
| 4410 | 1957 call.GetDocumentation() |
| 1958 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1959 .SetSummary("Get MD5 of attachment") | |
| 1960 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
| 1961 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
| 1962 return; | |
| 1963 } | |
| 1964 | |
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1965 FileInfo info; |
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1966 if (GetAttachmentInfo(info, call) && |
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1967 info.GetUncompressedMD5() != "") |
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1968 { |
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1969 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
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1970 } |
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1971 } |
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1972 |
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1973 |
| 974 | 1974 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
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1975 { |
| 4410 | 1976 if (call.IsDocumentation()) |
| 1977 { | |
| 1978 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1979 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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1980 AddAttachmentDocumentation(call, r); |
| 4410 | 1981 call.GetDocumentation() |
| 1982 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1983 .SetSummary("Get MD5 of attachment on disk") | |
| 1984 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
| 4413 | 1985 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
| 4410 | 1986 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
| 1987 return; | |
| 1988 } | |
| 1989 | |
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1990 FileInfo info; |
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1991 if (GetAttachmentInfo(info, call) && |
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1992 info.GetCompressedMD5() != "") |
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1993 { |
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1994 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
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1995 } |
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1996 } |
|
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1997 |
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1998 |
| 974 | 1999 static void VerifyAttachment(RestApiPostCall& call) |
|
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2000 { |
| 4410 | 2001 if (call.IsDocumentation()) |
| 2002 { | |
| 2003 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2004 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2005 call.GetDocumentation() | |
| 2006 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2007 .SetSummary("Verify attachment") | |
| 2008 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
| 2009 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2010 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 2011 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
| 2012 return; | |
| 2013 } | |
| 2014 | |
|
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2015 ServerContext& context = OrthancRestApi::GetContext(call); |
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2016 CheckValidResourceType(call); |
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2017 |
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2018 std::string publicId = call.GetUriComponent("id", ""); |
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2019 std::string name = call.GetUriComponent("name", ""); |
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2020 FileContentType contentType = StringToContentType(name); |
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2021 |
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2022 FileInfo info; |
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2023 int64_t revision; // Ignored |
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2024 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
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2025 info.GetCompressedMD5() == "" || |
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2026 info.GetUncompressedMD5() == "") |
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2027 { |
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2028 // Inexistent resource, or no MD5 available |
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2029 return; |
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2030 } |
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|
2031 |
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2032 bool ok = false; |
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2033 |
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2034 // First check whether the compressed data is correctly stored in the disk |
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2035 std::string data; |
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2036 context.ReadAttachment(data, revision, publicId, StringToContentType(name), false); |
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2037 |
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2038 std::string actualMD5; |
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2039 Toolbox::ComputeMD5(actualMD5, data); |
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2040 |
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2041 if (actualMD5 == info.GetCompressedMD5()) |
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2042 { |
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2043 // The compressed data is OK. If a compression algorithm was |
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2044 // applied to it, now check the MD5 of the uncompressed data. |
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2045 if (info.GetCompressionType() == CompressionType_None) |
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2046 { |
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2047 ok = true; |
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2048 } |
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2049 else |
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2050 { |
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2051 context.ReadAttachment(data, revision, publicId, StringToContentType(name), true); |
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2052 Toolbox::ComputeMD5(actualMD5, data); |
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2053 ok = (actualMD5 == info.GetUncompressedMD5()); |
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2054 } |
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2055 } |
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2056 |
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2057 if (ok) |
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2058 { |
|
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2059 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
|
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2060 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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2061 } |
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2062 else |
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2063 { |
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2064 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
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2065 } |
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2066 } |
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2067 |
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2068 |
| 974 | 2069 static void UploadAttachment(RestApiPutCall& call) |
|
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2070 { |
| 4414 | 2071 if (call.IsDocumentation()) |
| 2072 { | |
| 2073 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2074 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2075 call.GetDocumentation() | |
| 2076 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2077 .SetSummary("Set attachment") | |
| 2078 .SetDescription("Attach a file to the given DICOM " + r + | |
| 2079 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
| 2080 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 2081 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
| 2082 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
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2083 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
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2084 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
| 4414 | 2085 return; |
| 2086 } | |
| 2087 | |
|
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2088 ServerContext& context = OrthancRestApi::GetContext(call); |
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2089 CheckValidResourceType(call); |
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2090 |
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2091 std::string publicId = call.GetUriComponent("id", ""); |
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2092 std::string name = call.GetUriComponent("name", ""); |
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2093 |
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2094 FileContentType contentType = StringToContentType(name); |
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2095 if (IsUserContentType(contentType)) // It is forbidden to modify internal attachments |
|
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2096 { |
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2097 int64_t oldRevision; |
|
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2098 std::string oldMD5; |
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2099 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
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2100 |
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2101 if (!hasOldRevision) |
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2102 { |
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2103 OrthancConfiguration::ReaderLock lock; |
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2104 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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2105 { |
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2106 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
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2107 // the actual value of "oldRevision" if the metadata is |
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2108 // inexistent as expected |
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2109 hasOldRevision = true; |
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2110 oldRevision = -1; // dummy value |
|
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2111 oldMD5.clear(); // dummy value |
|
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2112 } |
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2113 } |
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2114 |
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2115 int64_t newRevision; |
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2116 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
|
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2117 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
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2118 |
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2119 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
|
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2120 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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2121 } |
|
2128
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2122 else |
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2123 { |
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2124 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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2125 } |
|
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2126 } |
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2127 |
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2128 |
| 974 | 2129 static void DeleteAttachment(RestApiDeleteCall& call) |
|
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2130 { |
| 4413 | 2131 if (call.IsDocumentation()) |
| 2132 { | |
| 2133 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2134 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2135 call.GetDocumentation() | |
| 2136 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2137 .SetSummary("Delete attachment") | |
| 4414 | 2138 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
| 2139 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
| 4413 | 2140 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2141 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2142 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2143 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4413 | 2144 return; |
| 2145 } | |
| 2146 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2147 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2148 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2149 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2150 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2151 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2152 |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2153 bool allowed; |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2154 if (IsUserContentType(contentType)) |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2155 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2156 allowed = true; |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2157 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2158 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2159 { |
|
2940
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2160 OrthancConfiguration::ReaderLock lock; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2161 |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2162 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2163 contentType == FileContentType_DicomAsJson) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2164 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2165 allowed = true; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2166 } |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2167 else |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2168 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2169 // It is forbidden to delete internal attachments, except for |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2170 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2171 // would be automatically reconstructed on the next GET call) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2172 allowed = false; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
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2935
diff
changeset
|
2173 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2174 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2175 |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2176 if (allowed) |
|
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2177 { |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2178 bool found; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2179 int64_t revision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2180 std::string md5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2181 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2182 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2183 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2184 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2185 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2186 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2187 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2188 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2189 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2190 throw OrthancException(ErrorCode_Revision, |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2191 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2192 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2193 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2194 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2195 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2196 false, -1 /* dummy value */, "" /* dummy value */); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2197 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2198 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2199 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2200 if (found) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2201 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2202 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2203 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2204 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2205 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2206 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2207 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2208 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2209 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2210 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2211 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2212 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2213 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2214 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2215 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2216 template <enum CompressionType compression> |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2217 static void ChangeAttachmentCompression(RestApiPostCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2218 { |
| 4413 | 2219 if (call.IsDocumentation()) |
| 2220 { | |
| 2221 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2222 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2223 call.GetDocumentation() | |
| 2224 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2225 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
| 2226 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
| 2227 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2228 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
| 4413 | 2229 return; |
| 2230 } | |
| 2231 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2232 CheckValidResourceType(call); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
2233 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2234 std::string publicId = call.GetUriComponent("id", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
2235 std::string name = call.GetUriComponent("name", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2236 FileContentType contentType = StringToContentType(name); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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1556
diff
changeset
|
2237 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2238 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
2239 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2240 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2241 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
2242 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
2243 static void IsAttachmentCompressed(RestApiGetCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
2244 { |
| 4413 | 2245 if (call.IsDocumentation()) |
| 2246 { | |
| 2247 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2248 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
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4623
diff
changeset
|
2249 AddAttachmentDocumentation(call, r); |
| 4413 | 2250 call.GetDocumentation() |
| 2251 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2252 .SetSummary("Is attachment compressed?") | |
| 2253 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
| 2254 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
| 2255 return; | |
| 2256 } | |
| 2257 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2258 FileInfo info; |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
2259 if (GetAttachmentInfo(info, call)) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
2260 { |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
2261 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
2262 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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|
2263 } |
|
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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|
2264 } |
|
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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2265 |
|
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
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|
2266 |
| 782 | 2267 // Raw access to the DICOM tags of an instance ------------------------------ |
| 2268 | |
| 974 | 2269 static void GetRawContent(RestApiGetCall& call) |
| 782 | 2270 { |
|
4405
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|
2271 if (call.IsDocumentation()) |
|
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|
2272 { |
|
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|
2273 call.GetDocumentation() |
|
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|
2274 .SetTag("Instances") |
|
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|
2275 .SetSummary("Get raw tag") |
|
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|
2276 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
|
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2277 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
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|
2278 .SetUriArgument("...", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
|
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|
2279 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
|
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2280 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
|
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2281 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
|
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2282 "or JSON array containing the list of available tags if accessing a dataset"); |
|
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|
2283 return; |
|
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2284 } |
|
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|
2285 |
| 782 | 2286 std::string id = call.GetUriComponent("id", ""); |
| 2287 | |
| 2288 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
| 2289 | |
| 2290 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
| 2291 } | |
| 2292 | |
|
751
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2293 |
|
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2294 |
|
960
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|
2295 static bool ExtractSharedTags(Json::Value& shared, |
|
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2296 ServerContext& context, |
|
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|
2297 const std::string& publicId) |
|
958
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2298 { |
|
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2299 // Retrieve all the instances of this patient/study/series |
|
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|
2300 typedef std::list<std::string> Instances; |
|
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2301 Instances instances; |
|
959
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|
2302 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
958
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2303 |
|
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2304 // Loop over the instances |
|
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2305 bool isFirst = true; |
|
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2306 shared = Json::objectValue; |
|
958
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2307 |
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|
2308 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2309 it != instances.end(); ++it) |
|
958
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2310 { |
|
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2311 // Get the tags of the current instance, in the simplified format |
|
960
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2312 Json::Value tags; |
|
959
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2313 |
|
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2314 try |
|
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|
2315 { |
| 2124 | 2316 context.ReadDicomAsJson(tags, *it); |
|
959
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|
2317 } |
|
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2318 catch (OrthancException&) |
|
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|
2319 { |
|
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2320 // Race condition: This instance has been removed since |
|
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2321 // (*). Ignore this instance. |
|
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2322 continue; |
|
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|
2323 } |
|
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2324 |
|
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2325 if (tags.type() != Json::objectValue) |
|
958
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2326 { |
|
960
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|
2327 return false; // Error |
|
958
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2328 } |
|
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2329 |
|
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2330 // Only keep the tags that are mapped to a string |
|
960
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|
2331 Json::Value::Members members = tags.getMemberNames(); |
|
958
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|
2332 for (size_t i = 0; i < members.size(); i++) |
|
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2333 { |
|
960
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|
2334 const Json::Value& tag = tags[members[i]]; |
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2335 if (tag.type() != Json::objectValue || |
|
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|
2336 tag["Type"].type() != Json::stringValue || |
|
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|
2337 tag["Type"].asString() != "String") |
|
958
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|
2338 { |
|
960
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|
2339 tags.removeMember(members[i]); |
|
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2340 } |
|
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2341 } |
|
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2342 |
|
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|
2343 if (isFirst) |
|
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|
2344 { |
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|
2345 // This is the first instance, keep its tags as such |
|
960
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2346 shared = tags; |
|
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2347 isFirst = false; |
|
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2348 } |
|
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|
2349 else |
|
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|
2350 { |
|
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|
2351 // Loop over all the members of the shared tags extracted so |
|
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2352 // far. If the value of one of these tags does not match its |
|
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|
2353 // value in the current instance, remove it. |
|
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2354 members = shared.getMemberNames(); |
|
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2355 for (size_t i = 0; i < members.size(); i++) |
|
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2356 { |
|
960
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2357 if (!tags.isMember(members[i]) || |
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2358 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
|
958
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2359 { |
|
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|
2360 shared.removeMember(members[i]); |
|
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2361 } |
|
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2362 } |
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2363 } |
|
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2364 } |
|
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2365 |
|
960
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2366 return true; |
|
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2367 } |
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2368 |
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2369 |
| 974 | 2370 static void GetSharedTags(RestApiGetCall& call) |
|
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2371 { |
|
4416
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2372 if (call.IsDocumentation()) |
|
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2373 { |
|
4697
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|
2374 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
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2375 |
|
4416
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2376 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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2377 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
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2378 call.GetDocumentation() |
|
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2379 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
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2380 .SetSummary("Get shared tags") |
|
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2381 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
|
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2382 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
|
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diff
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|
2383 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
0b27841950d5
openapi about creation of zip/media archives
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diff
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|
2384 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
|
0b27841950d5
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|
2385 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
|
0b27841950d5
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parents:
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diff
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|
2386 return; |
|
0b27841950d5
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|
2387 } |
|
0b27841950d5
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diff
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|
2388 |
|
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abac5c83134f
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2389 ServerContext& context = OrthancRestApi::GetContext(call); |
|
abac5c83134f
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|
2390 std::string publicId = call.GetUriComponent("id", ""); |
|
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simplified and extensive shared-tags
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|
2391 |
|
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|
2392 Json::Value sharedTags; |
|
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simplified and extensive shared-tags
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diff
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|
2393 if (ExtractSharedTags(sharedTags, context, publicId)) |
|
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simplified and extensive shared-tags
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diff
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|
2394 { |
|
abac5c83134f
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diff
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|
2395 // Success: Send the value of the shared tags |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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|
2396 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
960
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2397 } |
|
958
1fbe89dc18b5
extraction of the shared tags
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|
2398 } |
|
1fbe89dc18b5
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|
2399 |
|
1fbe89dc18b5
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2400 |
|
4697
569d9ef165b1
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|
2401 template <enum ResourceType resourceType, |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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|
2402 enum DicomModule module> |
|
569d9ef165b1
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|
2403 static void GetModule(RestApiGetCall& call) |
|
963
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2404 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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|
2405 if (call.IsDocumentation()) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2406 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2407 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
|
569d9ef165b1
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|
2408 std::string m; |
|
569d9ef165b1
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2409 switch (module) |
|
569d9ef165b1
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diff
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2410 { |
|
569d9ef165b1
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|
2411 case DicomModule_Patient: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
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2412 m = "patient"; |
|
569d9ef165b1
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diff
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2413 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
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|
2414 case DicomModule_Study: |
|
569d9ef165b1
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diff
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|
2415 m = "study"; |
|
569d9ef165b1
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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2416 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
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|
2417 case DicomModule_Series: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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2418 m = "series"; |
|
569d9ef165b1
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diff
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|
2419 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2420 case DicomModule_Instance: |
|
569d9ef165b1
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diff
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2421 m = "instance"; |
|
569d9ef165b1
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2422 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2423 default: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2424 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2425 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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2426 |
|
569d9ef165b1
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diff
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|
2427 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2428 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2429 call.GetDocumentation() |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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|
2430 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
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|
2431 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
2432 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2433 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2434 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
2435 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2436 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2437 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2438 return; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2439 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2440 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2441 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2442 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2443 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2444 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
|
6164f7200c43
refactoring modules
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parents:
1201
diff
changeset
|
2445 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
|
6164f7200c43
refactoring modules
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parents:
1201
diff
changeset
|
2446 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
|
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2447 { |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
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974
diff
changeset
|
2448 throw OrthancException(ErrorCode_NotImplemented); |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
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974
diff
changeset
|
2449 } |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
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974
diff
changeset
|
2450 |
|
963
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diff
changeset
|
2451 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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|
2452 std::string publicId = call.GetUriComponent("id", ""); |
|
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|
2453 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2454 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
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diff
changeset
|
2455 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2456 |
|
1276
6164f7200c43
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1201
diff
changeset
|
2457 typedef std::set<DicomTag> ModuleTags; |
|
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refactoring modules
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diff
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|
2458 ModuleTags moduleTags; |
| 1368 | 2459 DicomTag::AddTagsForModule(moduleTags, module); |
|
963
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diff
changeset
|
2460 |
|
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diff
changeset
|
2461 Json::Value tags; |
|
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diff
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|
2462 |
|
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|
2463 if (resourceType != ResourceType_Instance) |
|
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|
2464 { |
|
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2465 // Retrieve all the instances of this patient/study/series |
|
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|
2466 typedef std::list<std::string> Instances; |
|
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|
2467 Instances instances; |
|
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diff
changeset
|
2468 context.GetIndex().GetChildInstances(instances, publicId); |
|
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|
2469 |
|
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|
2470 if (instances.empty()) |
|
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|
2471 { |
|
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changeset
|
2472 return; // Error: No instance (should never happen) |
|
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diff
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|
2473 } |
|
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diff
changeset
|
2474 |
|
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changeset
|
2475 // Select one child instance |
|
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changeset
|
2476 publicId = instances.front(); |
|
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diff
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|
2477 } |
|
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diff
changeset
|
2478 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2479 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
|
963
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diff
changeset
|
2480 |
|
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diff
changeset
|
2481 // Filter the tags of the instance according to the module |
|
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diff
changeset
|
2482 Json::Value result = Json::objectValue; |
| 1303 | 2483 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
|
963
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|
2484 { |
|
1276
6164f7200c43
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diff
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|
2485 std::string s = tag->Format(); |
|
963
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|
2486 if (tags.isMember(s)) |
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|
2487 { |
|
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|
2488 result[s] = tags[s]; |
|
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|
2489 } |
|
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|
2490 } |
|
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|
2491 |
|
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569d9ef165b1
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|
2492 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
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|
2493 } |
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2494 |
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|
2495 |
| 1722 | 2496 namespace |
| 2497 { | |
| 2498 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
| 2499 } | |
| 2500 | |
| 2501 | |
| 2502 static void AccumulateLookupResults(LookupResults& result, | |
|
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|
2503 ServerIndex& index, |
|
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|
2504 const DicomTag& tag, |
|
1719
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|
2505 const std::string& value, |
|
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|
2506 ResourceType level) |
|
1718
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|
2507 { |
|
3034
54e422fe31ce
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|
2508 std::vector<std::string> tmp; |
|
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
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|
2509 index.LookupIdentifierExact(tmp, level, tag, value); |
|
1719
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2510 |
|
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|
2511 for (size_t i = 0; i < tmp.size(); i++) |
|
1719
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|
2512 { |
|
3034
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diff
changeset
|
2513 result.push_back(std::make_pair(level, tmp[i])); |
|
1719
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diff
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|
2514 } |
|
1718
2b812969e136
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diff
changeset
|
2515 } |
|
2b812969e136
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|
2516 |
|
2b812969e136
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|
2517 |
|
1139
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/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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|
2518 static void Lookup(RestApiPostCall& call) |
|
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|
2519 { |
| 4422 | 2520 if (call.IsDocumentation()) |
| 2521 { | |
| 2522 call.GetDocumentation() | |
| 2523 .SetTag("System") | |
| 2524 .SetSummary("Look for DICOM identifiers") | |
| 2525 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
| 2526 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
| 2527 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
| 2528 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
| 2529 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
| 2530 "DICOM resource that is stored by Orthanc"); | |
| 2531 return; | |
| 2532 } | |
| 2533 | |
|
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8dc80ba768aa
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|
2534 std::string tag; |
|
8dc80ba768aa
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|
2535 call.BodyToString(tag); |
|
1139
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|
2536 |
| 1722 | 2537 LookupResults resources; |
|
1718
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|
2538 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
1719
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|
2539 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
|
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|
2540 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
|
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|
2541 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
|
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|
2542 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
|
1718
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|
2543 |
|
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changeset
|
2544 Json::Value result = Json::arrayValue; |
| 1722 | 2545 for (LookupResults::const_iterator |
|
1718
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|
2546 it = resources.begin(); it != resources.end(); ++it) |
|
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|
2547 { |
|
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diff
changeset
|
2548 ResourceType type = it->first; |
|
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|
2549 const std::string& id = it->second; |
|
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|
2550 |
|
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diff
changeset
|
2551 Json::Value item = Json::objectValue; |
|
f167b672db94
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changeset
|
2552 item["Type"] = EnumerationToString(type); |
|
f167b672db94
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diff
changeset
|
2553 item["ID"] = id; |
|
f167b672db94
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diff
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|
2554 item["Path"] = GetBasePath(type, id); |
|
f167b672db94
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diff
changeset
|
2555 |
|
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/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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diff
changeset
|
2556 result.append(item); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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|
2557 } |
|
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diff
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|
2558 |
|
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diff
changeset
|
2559 call.GetOutput().AnswerJson(result); |
|
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|
2560 } |
|
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changeset
|
2561 |
|
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diff
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|
2562 |
|
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7695a9c81099
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|
2563 namespace |
|
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|
2564 { |
|
3021
2cbafb5d5a62
renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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3012
diff
changeset
|
2565 class FindVisitor : public ServerContext::ILookupVisitor |
|
3001
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|
2566 { |
|
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|
2567 private: |
|
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|
2568 bool isComplete_; |
|
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|
2569 std::list<std::string> resources_; |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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4694
diff
changeset
|
2570 DicomToJsonFormat format_; |
|
3001
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|
2571 |
|
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changeset
|
2572 public: |
| 4716 | 2573 explicit FindVisitor(DicomToJsonFormat format) : |
|
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diff
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|
2574 isComplete_(false), |
|
569d9ef165b1
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|
2575 format_(format) |
|
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|
2576 { |
|
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|
2577 } |
| 4205 | 2578 |
| 2579 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
|
3012
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2580 { |
|
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|
2581 return false; // (*) |
|
af1530b45290
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|
2582 } |
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|
2583 |
| 4205 | 2584 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
|
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2585 { |
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|
2586 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
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2587 } |
|
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2588 |
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|
2589 virtual void Visit(const std::string& publicId, |
|
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|
2590 const std::string& instanceId /* unused */, |
|
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|
2591 const DicomMap& mainDicomTags /* unused */, |
| 4205 | 2592 const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE |
|
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2593 { |
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|
2594 resources_.push_back(publicId); |
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2595 } |
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2596 |
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|
2597 void Answer(RestApiOutput& output, |
|
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|
2598 ServerIndex& index, |
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2599 ResourceType level, |
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|
2600 bool expand) const |
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2601 { |
|
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|
2602 AnswerListOfResources(output, index, resources_, level, expand, format_); |
|
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2603 } |
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|
2604 }; |
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2605 } |
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|
2606 |
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diff
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|
2607 |
| 1354 | 2608 static void Find(RestApiPostCall& call) |
| 2609 { | |
| 2998 | 2610 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
| 2611 static const char* const KEY_EXPAND = "Expand"; | |
| 2612 static const char* const KEY_LEVEL = "Level"; | |
| 2613 static const char* const KEY_LIMIT = "Limit"; | |
| 2614 static const char* const KEY_QUERY = "Query"; | |
| 2615 static const char* const KEY_SINCE = "Since"; | |
| 2616 | |
| 4421 | 2617 if (call.IsDocumentation()) |
| 2618 { | |
|
4697
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diff
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|
2619 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
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diff
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|
2620 |
| 4421 | 2621 call.GetDocumentation() |
| 2622 .SetTag("System") | |
| 2623 .SetSummary("Look for local resources") | |
| 2624 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
| 2625 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
| 2626 "https://book.orthanc-server.com/users/rest.html#performing-finds-within-orthanc") | |
| 2627 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, | |
| 2628 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
| 2629 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
| 2630 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
| 2631 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
| 2632 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
| 2633 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
| 2634 "Limit the number of reported resources", false) | |
| 2635 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
| 2636 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
| 2637 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, | |
| 2638 "Associative array containing the filter on the values of the DICOM tags", true) | |
| 2639 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " | |
| 2640 "about the reported resources (if `Expand` argument is `true`)"); | |
| 2641 return; | |
| 2642 } | |
| 2643 | |
| 1358 | 2644 ServerContext& context = OrthancRestApi::GetContext(call); |
| 1354 | 2645 |
| 2646 Json::Value request; | |
|
3001
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2647 if (!call.ParseJsonRequest(request) || |
|
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|
2648 request.type() != Json::objectValue) |
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|
2649 { |
|
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|
2650 throw OrthancException(ErrorCode_BadRequest, |
|
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|
2651 "The body must contain a JSON object"); |
|
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|
2652 } |
|
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2653 else if (!request.isMember(KEY_LEVEL) || |
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|
2654 request[KEY_LEVEL].type() != Json::stringValue) |
|
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2655 { |
|
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|
2656 throw OrthancException(ErrorCode_BadRequest, |
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|
2657 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
|
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2658 } |
|
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|
2659 else if (!request.isMember(KEY_QUERY) && |
|
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|
2660 request[KEY_QUERY].type() != Json::objectValue) |
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|
2661 { |
|
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|
2662 throw OrthancException(ErrorCode_BadRequest, |
|
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|
2663 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
|
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2664 } |
|
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|
2665 else if (request.isMember(KEY_CASE_SENSITIVE) && |
|
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|
2666 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
|
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|
2667 { |
|
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|
2668 throw OrthancException(ErrorCode_BadRequest, |
|
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refactoring /tools/find using LookupResource::IVisitor
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diff
changeset
|
2669 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" should be a Boolean"); |
|
7695a9c81099
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|
2670 } |
|
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|
2671 else if (request.isMember(KEY_LIMIT) && |
|
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|
2672 request[KEY_LIMIT].type() != Json::intValue) |
|
7695a9c81099
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|
2673 { |
|
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|
2674 throw OrthancException(ErrorCode_BadRequest, |
|
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|
2675 "Field \"" + std::string(KEY_LIMIT) + "\" should be an integer"); |
|
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|
2676 } |
|
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2677 else if (request.isMember(KEY_SINCE) && |
|
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refactoring /tools/find using LookupResource::IVisitor
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|
2678 request[KEY_SINCE].type() != Json::intValue) |
|
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2679 { |
|
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2680 throw OrthancException(ErrorCode_BadRequest, |
|
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|
2681 "Field \"" + std::string(KEY_SINCE) + "\" should be an integer"); |
|
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2682 } |
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|
2683 else |
| 1354 | 2684 { |
| 2685 bool expand = false; | |
| 2998 | 2686 if (request.isMember(KEY_EXPAND)) |
| 1354 | 2687 { |
| 2998 | 2688 expand = request[KEY_EXPAND].asBool(); |
| 1354 | 2689 } |
| 2690 | |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
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|
2691 bool caseSensitive = false; |
| 2998 | 2692 if (request.isMember(KEY_CASE_SENSITIVE)) |
|
1374
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|
2693 { |
| 2998 | 2694 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
|
1374
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|
2695 } |
|
a1745d9be6e9
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|
2696 |
| 1758 | 2697 size_t limit = 0; |
| 2998 | 2698 if (request.isMember(KEY_LIMIT)) |
| 1758 | 2699 { |
| 2998 | 2700 int tmp = request[KEY_LIMIT].asInt(); |
| 1847 | 2701 if (tmp < 0) |
| 1758 | 2702 { |
|
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|
2703 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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changeset
|
2704 "Field \"" + std::string(KEY_LIMIT) + "\" should be a positive integer"); |
| 1758 | 2705 } |
| 1847 | 2706 |
| 2707 limit = static_cast<size_t>(tmp); | |
| 1758 | 2708 } |
| 2709 | |
|
2304
563bf878407a
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diff
changeset
|
2710 size_t since = 0; |
| 2998 | 2711 if (request.isMember(KEY_SINCE)) |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2712 { |
| 2998 | 2713 int tmp = request[KEY_SINCE].asInt(); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
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|
2714 if (tmp < 0) |
|
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Argument "Since" in URI "/tools/find" (related to issue 53)
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diff
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|
2715 { |
|
3001
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|
2716 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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2717 "Field \"" + std::string(KEY_SINCE) + "\" should be a positive integer"); |
|
2304
563bf878407a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2718 } |
|
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Argument "Since" in URI "/tools/find" (related to issue 53)
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2719 |
|
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diff
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|
2720 since = static_cast<size_t>(tmp); |
|
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|
2721 } |
|
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2722 |
|
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|
2723 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
| 1360 | 2724 |
|
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|
2725 DatabaseLookup query; |
| 1358 | 2726 |
| 2998 | 2727 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
| 1354 | 2728 for (size_t i = 0; i < members.size(); i++) |
| 2729 { | |
| 2998 | 2730 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
| 1354 | 2731 { |
|
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2732 throw OrthancException(ErrorCode_BadRequest, |
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|
2733 "Tag \"" + members[i] + "\" should be associated with a string"); |
| 1354 | 2734 } |
| 2735 | |
|
3163
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Fix issue #90 (C-Find shall match missing tags to null/empty string)
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|
2736 const std::string value = request[KEY_QUERY][members[i]].asString(); |
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2737 |
|
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2738 if (!value.empty()) |
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2739 { |
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|
2740 // An empty string corresponds to an universal constraint, |
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|
2741 // so we ignore it. This mimics the behavior of class |
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|
2742 // "OrthancFindRequestHandler" |
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|
2743 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
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|
2744 value, caseSensitive, true); |
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2745 } |
|
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2746 } |
| 2876 | 2747 |
|
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changeset
|
2748 FindVisitor visitor(OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human)); |
|
3033
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|
2749 context.Apply(visitor, query, level, since, limit); |
|
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|
2750 visitor.Answer(call.GetOutput(), context.GetIndex(), level, expand); |
| 1354 | 2751 } |
| 2752 } | |
| 2753 | |
| 2754 | |
|
1140
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|
2755 template <enum ResourceType start, |
|
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|
2756 enum ResourceType end> |
|
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changeset
|
2757 static void GetChildResources(RestApiGetCall& call) |
|
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|
2758 { |
| 4415 | 2759 if (call.IsDocumentation()) |
| 2760 { | |
|
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changeset
|
2761 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
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diff
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|
2762 |
| 4415 | 2763 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
| 2764 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 2765 call.GetDocumentation() | |
| 2766 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 2767 .SetSummary("Get child " + children) | |
| 2768 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
|
4416
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diff
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|
2769 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 2770 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 2771 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) | |
| 2772 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
| 2773 return; | |
| 2774 } | |
| 2775 | |
|
1140
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diff
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|
2776 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
94c5f6623b3a
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diff
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|
2777 |
|
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diff
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|
2778 std::list<std::string> a, b, c; |
|
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diff
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|
2779 a.push_back(call.GetUriComponent("id", "")); |
|
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|
2780 |
|
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diff
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|
2781 ResourceType type = start; |
|
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|
2782 while (type != end) |
|
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|
2783 { |
|
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|
2784 b.clear(); |
|
94c5f6623b3a
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|
2785 |
|
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|
2786 for (std::list<std::string>::const_iterator |
| 1303 | 2787 it = a.begin(); it != a.end(); ++it) |
|
1140
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|
2788 { |
|
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diff
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|
2789 index.GetChildren(c, *it); |
|
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diff
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|
2790 b.splice(b.begin(), c); |
|
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diff
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|
2791 } |
|
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|
2792 |
|
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diff
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|
2793 type = GetChildResourceType(type); |
|
1140
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diff
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|
2794 |
|
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diff
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|
2795 a.clear(); |
|
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diff
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|
2796 a.splice(a.begin(), b); |
|
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|
2797 } |
|
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diff
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|
2798 |
|
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diff
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|
2799 Json::Value result = Json::arrayValue; |
|
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diff
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|
2800 |
|
4697
569d9ef165b1
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diff
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|
2801 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
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diff
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|
2802 |
|
1140
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|
2803 for (std::list<std::string>::const_iterator |
| 1303 | 2804 it = a.begin(); it != a.end(); ++it) |
|
1140
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diff
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|
2805 { |
| 4554 | 2806 Json::Value resource; |
|
4697
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diff
changeset
|
2807 if (OrthancRestApi::GetIndex(call).ExpandResource(resource, *it, end, format)) |
|
1140
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diff
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|
2808 { |
| 4554 | 2809 result.append(resource); |
|
1140
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|
2810 } |
|
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|
2811 } |
|
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|
2812 |
|
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diff
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|
2813 call.GetOutput().AnswerJson(result); |
|
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|
2814 } |
|
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|
2815 |
|
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|
2816 |
|
1166
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|
2817 static void GetChildInstancesTags(RestApiGetCall& call) |
|
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|
2818 { |
|
4416
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|
2819 if (call.IsDocumentation()) |
|
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|
2820 { |
|
4697
569d9ef165b1
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2821 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
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diff
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|
2822 |
|
4416
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|
2823 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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|
2824 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
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|
2825 call.GetDocumentation() |
|
0b27841950d5
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|
2826 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
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|
2827 .SetSummary("Get tags of instances") |
|
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|
2828 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
|
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|
2829 " whose Orthanc identifier is provided in the URL") |
|
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|
2830 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
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changeset
|
2831 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4416
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|
2832 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
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|
2833 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
|
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|
2834 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
|
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|
2835 return; |
|
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|
2836 } |
|
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|
2837 |
|
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|
2838 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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|
2839 std::string publicId = call.GetUriComponent("id", ""); |
|
4697
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diff
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|
2840 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
|
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|
2841 |
|
2409
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|
2842 std::set<DicomTag> ignoreTagLength; |
|
4722
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diff
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|
2843 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
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|
2844 |
|
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|
2845 // Retrieve all the instances of this patient/study/series |
|
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2846 typedef std::list<std::string> Instances; |
|
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2847 Instances instances; |
|
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2848 |
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|
2849 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
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2850 |
|
1201
09aa7c126be9
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|
2851 Json::Value result = Json::objectValue; |
|
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2852 |
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2853 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2854 it != instances.end(); ++it) |
|
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2855 { |
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2856 Json::Value full; |
|
2409
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2857 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
|
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2858 |
|
2622
3603a2e14592
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2447
diff
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|
2859 if (format != DicomToJsonFormat_Full) |
|
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2860 { |
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|
2861 Json::Value simplified; |
|
4055
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diff
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|
2862 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
|
1201
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|
2863 result[*it] = simplified; |
|
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2864 } |
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2865 else |
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2866 { |
|
1201
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|
2867 result[*it] = full; |
|
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2868 } |
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|
2869 } |
|
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|
2870 |
|
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|
2871 call.GetOutput().AnswerJson(result); |
|
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|
2872 } |
|
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|
2873 |
|
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bulk tags retrieval
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parents:
1146
diff
changeset
|
2874 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2875 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2876 template <enum ResourceType start, |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2877 enum ResourceType end> |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2878 static void GetParentResource(RestApiGetCall& call) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2879 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2880 assert(start > end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2881 |
| 4415 | 2882 if (call.IsDocumentation()) |
| 2883 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2884 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2885 |
| 4415 | 2886 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
| 2887 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 2888 call.GetDocumentation() | |
| 2889 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 2890 .SetSummary("Get parent " + parent) | |
| 2891 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2892 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 2893 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 2894 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
| 2895 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
| 2896 return; | |
| 2897 } | |
| 2898 | |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2899 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2900 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2901 std::string current = call.GetUriComponent("id", ""); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2902 ResourceType currentType = start; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2903 while (currentType > end) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2904 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2905 std::string parent; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2906 if (!index.LookupParent(parent, current)) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2907 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2908 // Error that could happen if the resource gets deleted by |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2909 // another concurrent call |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2910 return; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2911 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2912 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2913 current = parent; |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2914 currentType = GetParentResourceType(currentType); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2915 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2916 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2917 assert(currentType == end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2918 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2919 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2920 |
| 4554 | 2921 Json::Value resource; |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2922 if (OrthancRestApi::GetIndex(call).ExpandResource(resource, current, end, format)) |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2923 { |
| 4554 | 2924 call.GetOutput().AnswerJson(resource); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2925 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2926 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2927 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2928 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2929 static void ExtractPdf(RestApiGetCall& call) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2930 { |
| 4407 | 2931 if (call.IsDocumentation()) |
| 2932 { | |
| 2933 call.GetDocumentation() | |
| 2934 .SetTag("Instances") | |
| 2935 .SetSummary("Get embedded PDF") | |
| 2936 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
| 2937 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
| 2938 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
| 2939 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
| 2940 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
| 2941 return; | |
| 2942 } | |
| 2943 | |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2944 const std::string id = call.GetUriComponent("id", ""); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2945 std::string pdf; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2946 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2947 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2948 if (locker.GetDicom().ExtractPdf(pdf)) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2949 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2950 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2951 return; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2952 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2953 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
2954 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
2955 |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2956 static void OrderSlices(RestApiGetCall& call) |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2957 { |
| 4421 | 2958 if (call.IsDocumentation()) |
| 2959 { | |
| 2960 call.GetDocumentation() | |
| 2961 .SetDeprecated() | |
| 2962 .SetTag("Series") | |
| 2963 .SetSummary("Order the slices") | |
| 2964 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
| 2965 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
| 2966 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
| 2967 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 2968 "Ordered list of paths to DICOM instances") | |
| 2969 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 2970 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
| 2971 "in the case of multiframe images.") | |
| 2972 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
| 2973 "Same information as the `Slices` field, but in a compact form") | |
| 2974 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
| 2975 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
| 2976 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); | |
| 2977 return; | |
| 2978 } | |
| 2979 | |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2980 const std::string id = call.GetUriComponent("id", ""); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2981 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2982 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2983 SliceOrdering ordering(index, id); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2984 |
|
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
2985 Json::Value result; |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
2986 ordering.Format(result); |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
2987 call.GetOutput().AnswerJson(result); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2988 } |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2989 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
2990 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2991 static void GetInstanceHeader(RestApiGetCall& call) |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
2992 { |
| 4404 | 2993 if (call.IsDocumentation()) |
| 2994 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2995 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 2996 call.GetDocumentation() |
| 2997 .SetTag("Instances") | |
| 2998 .SetSummary("Get DICOM meta-header") | |
| 2999 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
| 3000 "combines hexadecimal tags with human-readable description.") | |
| 3001 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 3002 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
| 3003 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); | |
| 3004 return; | |
| 3005 } | |
| 3006 | |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3007 ServerContext& context = OrthancRestApi::GetContext(call); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3008 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3009 std::string publicId = call.GetUriComponent("id", ""); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3010 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3011 std::string dicomContent; |
| 2124 | 3012 context.ReadDicom(dicomContent, publicId); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3013 |
|
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3014 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3015 // speed up things here |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3016 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3017 ParsedDicomFile dicom(dicomContent); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3018 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3019 Json::Value header; |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3020 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3021 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3022 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3023 } |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3024 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3025 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3026 static void InvalidateTags(RestApiPostCall& call) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3027 { |
| 4420 | 3028 if (call.IsDocumentation()) |
| 3029 { | |
| 3030 call.GetDocumentation() | |
| 3031 .SetTag("System") | |
| 3032 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
| 3033 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
| 3034 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
| 3035 "This is notably useful after changes to the `Dictionary` configuration option. " | |
| 3036 "https://book.orthanc-server.com/faq/orthanc-storage.html#storage-area"); | |
| 3037 return; | |
| 3038 } | |
| 3039 | |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3040 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3041 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3042 // Loop over the instances, grouping them by parent studies so as |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3043 // to avoid large memory consumption |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3044 std::list<std::string> studies; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3045 index.GetAllUuids(studies, ResourceType_Study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3046 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3047 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3048 study = studies.begin(); study != studies.end(); ++study) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3049 { |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3050 std::list<std::string> instances; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3051 index.GetChildInstances(instances, *study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3052 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3053 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3054 instance = instances.begin(); instance != instances.end(); ++instance) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3055 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3056 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3057 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3058 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3059 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3060 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3061 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3062 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3063 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3064 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3065 template <enum ResourceType type> |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3066 static void ReconstructResource(RestApiPostCall& call) |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3067 { |
| 4420 | 3068 if (call.IsDocumentation()) |
| 3069 { | |
| 3070 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
| 3071 call.GetDocumentation() | |
| 3072 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
| 3073 .SetSummary("Reconstruct tags of " + resource) | |
| 3074 .SetDescription("Reconstruct the main DICOM tags of the " + resource + " whose Orthanc identifier is provided " | |
| 3075 "in the URL. This is useful if child studies/series/instances have inconsistent values for " | |
| 3076 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
| 3077 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
| 3078 "parsed again, and the Orthanc index will be updated accordingly.") | |
| 3079 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
| 3080 return; | |
| 3081 } | |
| 3082 | |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3083 ServerContext& context = OrthancRestApi::GetContext(call); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3084 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", "")); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3085 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3086 } |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3087 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3088 |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3089 static void ReconstructAllResources(RestApiPostCall& call) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3090 { |
| 4420 | 3091 if (call.IsDocumentation()) |
| 3092 { | |
| 3093 call.GetDocumentation() | |
| 3094 .SetTag("System") | |
| 3095 .SetSummary("Reconstruct all the index") | |
| 3096 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
| 3097 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
| 3098 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
| 3099 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated."); | |
| 3100 return; | |
| 3101 } | |
| 3102 | |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3103 ServerContext& context = OrthancRestApi::GetContext(call); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3104 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3105 std::list<std::string> studies; |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3106 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3107 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3108 for (std::list<std::string>::const_iterator |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3109 study = studies.begin(); study != studies.end(); ++study) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3110 { |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3111 ServerToolbox::ReconstructResource(context, *study); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3112 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3113 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3114 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3115 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3116 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3117 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3118 static void GetBulkChildren(std::set<std::string>& target, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3119 ServerIndex& index, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3120 const std::set<std::string>& source) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3121 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3122 target.clear(); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3123 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3124 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3125 it = source.begin(); it != source.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3126 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3127 std::list<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3128 index.GetChildren(children, *it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3129 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3130 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3131 child = children.begin(); child != children.end(); ++child) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3132 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3133 target.insert(*child); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3134 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3135 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3136 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3137 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3138 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3139 static void AddMetadata(Json::Value& target, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3140 ServerIndex& index, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3141 const std::string& resource, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3142 ResourceType level) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3143 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3144 target = Json::objectValue; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3145 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3146 std::map<MetadataType, std::string> content; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3147 index.GetAllMetadata(content, resource, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3148 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3149 for (std::map<MetadataType, std::string>::const_iterator |
|
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parents:
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diff
changeset
|
3150 it = content.begin(); it != content.end(); ++it) |
|
8ffe2fdb541f
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parents:
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diff
changeset
|
3151 { |
|
8ffe2fdb541f
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parents:
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diff
changeset
|
3152 target[EnumerationToString(it->first)] = it->second; |
|
8ffe2fdb541f
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parents:
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diff
changeset
|
3153 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
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parents:
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diff
changeset
|
3154 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
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parents:
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diff
changeset
|
3155 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3156 |
|
4698
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new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3157 static void BulkContent(RestApiPostCall& call) |
|
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new route "/tools/bulk-content" to get the content of a set of resources
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parents:
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diff
changeset
|
3158 { |
|
4714
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parents:
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diff
changeset
|
3159 static const char* const LEVEL = "Level"; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3160 static const char* const METADATA = "Metadata"; |
|
8ffe2fdb541f
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diff
changeset
|
3161 |
|
4698
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3162 if (call.IsDocumentation()) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3163 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3164 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
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parents:
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diff
changeset
|
3165 |
|
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new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3166 call.GetDocumentation() |
|
d16c3c7f11ef
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diff
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|
3167 .SetTag("System") |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3168 .SetSummary("Describe a set of instances") |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3169 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3170 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4714
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diff
changeset
|
3171 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
|
4699
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diff
changeset
|
3172 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3173 "`Instance`). Orthanc will loop over the items inside `Resources`, and explorer upward or " |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3174 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
|
4714
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3175 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
|
8ffe2fdb541f
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parents:
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diff
changeset
|
3176 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
|
4698
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diff
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|
3177 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3178 "whose identifiers are provided in the `Resources` field, in one single call."); |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3179 return; |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3180 } |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3181 |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3182 Json::Value request; |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3183 if (!call.ParseJsonRequest(request) || |
|
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new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3184 request.type() != Json::objectValue) |
|
d16c3c7f11ef
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parents:
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diff
changeset
|
3185 { |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3186 throw OrthancException(ErrorCode_BadRequest, |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3187 "The body must contain a JSON object"); |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3188 } |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3189 else |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3190 { |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3191 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3192 |
|
4714
8ffe2fdb541f
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3193 bool metadata = true; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3194 if (request.isMember(METADATA)) |
|
8ffe2fdb541f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3195 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3196 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
|
8ffe2fdb541f
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3197 } |
|
8ffe2fdb541f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3198 |
|
4698
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3199 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3200 |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3201 Json::Value answer = Json::arrayValue; |
|
4699
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added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3202 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3203 if (request.isMember(LEVEL)) |
|
4698
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diff
changeset
|
3204 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4698
diff
changeset
|
3205 // Complex case: Need to explore the DICOM hierarchy |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3206 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3207 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3208 std::set<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3209 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3210 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3211 std::set<std::string> interest; |
|
facea16b055b
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3212 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3213 assert(ResourceType_Patient < ResourceType_Study && |
|
facea16b055b
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3214 ResourceType_Study < ResourceType_Series && |
|
facea16b055b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3215 ResourceType_Series < ResourceType_Instance); |
|
facea16b055b
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3216 |
|
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diff
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|
3217 for (std::set<std::string>::const_iterator |
|
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diff
changeset
|
3218 it = resources.begin(); it != resources.end(); ++it) |
|
4698
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diff
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|
3219 { |
|
4699
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diff
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|
3220 ResourceType type; |
|
facea16b055b
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|
3221 if (index.LookupResourceType(type, *it)) |
|
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|
3222 { |
|
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diff
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|
3223 if (type == level) |
|
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|
3224 { |
|
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|
3225 // This resource is already from the level of interest |
|
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|
3226 interest.insert(*it); |
|
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|
3227 } |
|
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diff
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|
3228 else if (type < level) |
|
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|
3229 { |
|
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|
3230 // Need to explore children |
|
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|
3231 std::set<std::string> current; |
|
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|
3232 current.insert(*it); |
|
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|
3233 |
|
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|
3234 for (;;) |
|
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|
3235 { |
|
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|
3236 std::set<std::string> children; |
|
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|
3237 GetBulkChildren(children, index, current); |
|
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|
3238 |
|
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|
3239 type = GetChildResourceType(type); |
|
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|
3240 if (type == level) |
|
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|
3241 { |
|
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|
3242 for (std::set<std::string>::const_iterator |
| 4716 | 3243 it2 = children.begin(); it2 != children.end(); ++it2) |
|
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|
3244 { |
| 4716 | 3245 interest.insert(*it2); |
|
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|
3246 } |
|
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changeset
|
3247 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3248 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3249 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3250 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3251 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3252 current.swap(children); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3253 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3254 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3255 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3256 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3257 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3258 // Need to explore parents |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3259 std::string current = *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3260 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3261 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3262 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3263 std::string parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3264 if (index.LookupParent(parent, current)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3265 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3266 type = GetParentResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3267 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3268 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3269 interest.insert(parent); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3270 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3271 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3272 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3273 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3274 current = parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3275 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3276 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3277 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3278 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3279 break; // The resource has been deleted during the exploration |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3280 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3281 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3282 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3283 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3284 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3285 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3286 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3287 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3288 } |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3289 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3290 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3291 it = interest.begin(); it != interest.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3292 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3293 Json::Value item; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3294 if (index.ExpandResource(item, *it, level, format)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3295 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3296 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3297 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3298 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3299 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3300 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3301 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3302 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3303 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3304 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3305 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3306 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3307 // Simple case: We return the queried resources as such |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3308 std::list<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3309 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3310 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3311 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3312 it = resources.begin(); it != resources.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3313 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3314 ResourceType level; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3315 Json::Value item; |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3316 if (index.LookupResourceType(level, *it) && |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3317 index.ExpandResource(item, *it, level, format)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3318 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3319 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3320 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3321 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3322 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3323 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3324 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3325 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3326 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3327 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3328 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3329 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3330 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3331 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3332 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3333 call.GetOutput().AnswerJson(answer); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3334 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3335 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3336 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3337 |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3338 static void BulkDelete(RestApiPostCall& call) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3339 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3340 if (call.IsDocumentation()) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3341 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3342 call.GetDocumentation() |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3343 .SetTag("System") |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3344 .SetSummary("Delete a set of instances") |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3345 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3346 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3347 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3348 "whose identifiers are provided in the `Resources` field."); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3349 return; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3350 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3351 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3352 ServerContext& context = OrthancRestApi::GetContext(call); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3353 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3354 Json::Value request; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3355 if (!call.ParseJsonRequest(request) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3356 request.type() != Json::objectValue) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3357 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3358 throw OrthancException(ErrorCode_BadRequest, |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3359 "The body must contain a JSON object"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3360 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3361 else |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3362 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3363 std::set<std::string> resources; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3364 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3365 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3366 for (std::set<std::string>::const_iterator |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3367 it = resources.begin(); it != resources.end(); ++it) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3368 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3369 ResourceType type; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3370 Json::Value remainingAncestor; // Unused |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3371 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3372 if (!context.GetIndex().LookupResourceType(type, *it) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3373 !context.DeleteResource(remainingAncestor, *it, type)) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3374 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3375 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3376 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3377 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3378 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3379 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3380 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3381 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3382 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3383 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3384 void OrthancRestApi::RegisterResources() |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3385 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3386 Register("/instances", ListResources<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3387 Register("/patients", ListResources<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3388 Register("/series", ListResources<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3389 Register("/studies", ListResources<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3390 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3391 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3392 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3393 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3394 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3395 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3396 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3397 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3398 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3399 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3400 Register("/instances/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3401 Register("/patients/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3402 Register("/studies/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3403 Register("/series/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3404 |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3405 Register("/patients/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3406 Register("/series/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3407 Register("/studies/{id}/shared-tags", GetSharedTags); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
3408 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3409 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3410 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3411 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3412 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3413 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3414 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3415 Register("/instances/{id}/file", GetInstanceFile); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3416 Register("/instances/{id}/export", ExportInstanceFile); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3417 Register("/instances/{id}/tags", GetInstanceTags); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3418 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3419 Register("/instances/{id}/frames", ListFrames); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3420 |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
3421 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3422 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3423 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3424 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3425 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3426 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3427 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3428 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3429 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3430 Register("/instances/{id}/pdf", ExtractPdf); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3431 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3432 Register("/instances/{id}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3433 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3434 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3435 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3436 Register("/instances/{id}/matlab", GetMatlabImage); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3437 Register("/instances/{id}/header", GetInstanceHeader); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3438 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3439 Register("/patients/{id}/protected", IsProtectedPatient); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3440 Register("/patients/{id}/protected", SetPatientProtection); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3441 |
| 4409 | 3442 std::vector<std::string> resourceTypes; |
| 3443 resourceTypes.push_back("patients"); | |
| 3444 resourceTypes.push_back("studies"); | |
| 3445 resourceTypes.push_back("series"); | |
| 3446 resourceTypes.push_back("instances"); | |
| 3447 | |
| 3448 for (size_t i = 0; i < resourceTypes.size(); i++) | |
| 3449 { | |
| 3450 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
| 3451 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
| 3452 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
| 3453 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3454 |
| 4409 | 3455 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
| 3456 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
| 3457 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
| 3458 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
| 3459 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
| 3460 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
| 3461 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
| 3462 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
| 3463 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
| 3464 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
| 3465 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
| 3466 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
| 3467 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
| 3468 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); | |
| 3469 } | |
| 782 | 3470 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3471 Register("/tools/invalidate-tags", InvalidateTags); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3472 Register("/tools/lookup", Lookup); |
| 1354 | 3473 Register("/tools/find", Find); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3474 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3475 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3476 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3477 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3478 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3479 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3480 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3481 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3482 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3483 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3484 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3485 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3486 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3487 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3488 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3489 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3490 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3491 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3492 |
| 782 | 3493 Register("/instances/{id}/content/*", GetRawContent); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3494 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3495 Register("/series/{id}/ordered-slices", OrderSlices); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3496 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3497 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3498 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3499 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3500 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3501 Register("/tools/reconstruct", ReconstructAllResources); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3502 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3503 Register("/tools/bulk-content", BulkContent); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3504 Register("/tools/bulk-delete", BulkDelete); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3505 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3506 } |