Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 5828:7030fa489669 find-refactoring
tools/find: QueryMetadata
| author | Alain Mazy <am@orthanc.team> |
|---|---|
| date | Mon, 07 Oct 2024 15:19:26 +0200 |
| parents | d73dfb4548c6 |
| children | 963945d780d6 |
| rev | line source |
|---|---|
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2024-2024 Orthanc Team SRL, Belgium |
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7 * Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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8 * |
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9 * This program is free software: you can redistribute it and/or |
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10 * modify it under the terms of the GNU General Public License as |
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11 * published by the Free Software Foundation, either version 3 of the |
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12 * License, or (at your option) any later version. |
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13 * |
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14 * This program is distributed in the hope that it will be useful, but |
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15 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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17 * General Public License for more details. |
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18 * |
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19 * You should have received a copy of the GNU General Public License |
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20 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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21 **/ |
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22 |
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23 |
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24 #include "../PrecompiledHeadersServer.h" |
| 5608 | 25 #include "../ResourceFinder.h" |
| 26 | |
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27 #include "OrthancRestApi.h" |
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28 |
| 4045 | 29 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
| 30 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
| 31 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
| 32 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
| 33 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
| 34 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
| 35 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
| 36 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
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37 #include "../../../OrthancFramework/Sources/Images/NumpyWriter.h" |
| 4045 | 38 #include "../../../OrthancFramework/Sources/Logging.h" |
| 39 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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40 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
| 4045 | 41 |
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42 #include "../OrthancConfiguration.h" |
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43 #include "../Search/DatabaseLookup.h" |
| 5828 | 44 #include "../Search/DatabaseMetadataConstraint.h" |
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45 #include "../ServerContext.h" |
| 2131 | 46 #include "../ServerToolbox.h" |
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47 #include "../SliceOrdering.h" |
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48 |
| 3687 | 49 // This "include" is mandatory for Release builds using Linux Standard Base |
| 50 #include <boost/math/special_functions/round.hpp> | |
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51 #include <boost/shared_ptr.hpp> |
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52 |
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53 /** |
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54 * This semaphore is used to limit the number of concurrent HTTP |
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55 * requests on CPU-intensive routes of the REST API, in order to |
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56 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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57 **/ |
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58 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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59 |
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60 |
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61 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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62 |
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63 static const char* const IGNORE_LENGTH = "ignore-length"; |
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64 static const char* const RECONSTRUCT_FILES = "ReconstructFiles"; |
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65 static const char* const LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS = "LimitToThisLevelMainDicomTags"; |
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66 static const char* const ARG_WHOLE = "whole"; |
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67 |
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68 |
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69 namespace Orthanc |
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70 { |
| 4415 | 71 static std::string GetDocumentationSampleResource(ResourceType type) |
| 72 { | |
| 73 switch (type) | |
| 74 { | |
| 75 case Orthanc::ResourceType_Instance: | |
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76 return "https://orthanc.uclouvain.be/demo/instances/6582b1c0-292ad5ab-ba0f088f-f7a1766f-9a29a54f"; |
| 4415 | 77 break; |
| 78 | |
| 79 case Orthanc::ResourceType_Series: | |
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80 return "https://orthanc.uclouvain.be/demo/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; |
| 4415 | 81 break; |
| 82 | |
| 83 case Orthanc::ResourceType_Study: | |
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84 return "https://orthanc.uclouvain.be/demo/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; |
| 4415 | 85 break; |
| 86 | |
| 87 case Orthanc::ResourceType_Patient: | |
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88 return "https://orthanc.uclouvain.be/demo/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; |
| 4415 | 89 break; |
| 90 | |
| 91 default: | |
| 92 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 93 } | |
| 94 } | |
| 95 | |
| 96 | |
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97 static void AnswerDicomAsJson(RestApiCall& call, |
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98 const Json::Value& dicom, |
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99 DicomToJsonFormat mode) |
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100 { |
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101 if (mode != DicomToJsonFormat_Full) |
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102 { |
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103 Json::Value simplified; |
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104 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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105 call.GetOutput().AnswerJson(simplified); |
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106 } |
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107 else |
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108 { |
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109 call.GetOutput().AnswerJson(dicom); |
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110 } |
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111 } |
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112 |
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113 |
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114 static void ParseSetOfTags(std::set<DicomTag>& target, |
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115 const RestApiGetCall& call, |
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116 const std::string& argument) |
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117 { |
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118 target.clear(); |
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119 |
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120 if (call.HasArgument(argument)) |
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121 { |
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122 std::vector<std::string> tags; |
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123 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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124 |
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125 for (size_t i = 0; i < tags.size(); i++) |
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126 { |
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127 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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128 } |
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129 } |
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130 } |
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131 |
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132 |
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133 static bool ExpandResource(Json::Value& target, |
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134 ServerContext& context, |
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135 ResourceType level, |
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136 const std::string& identifier, |
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137 DicomToJsonFormat format, |
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138 bool retrieveMetadata) |
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139 { |
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140 ResourceFinder finder(level, true /* expand */); |
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141 finder.SetOrthancId(level, identifier); |
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142 finder.SetRetrieveMetadata(retrieveMetadata); |
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143 |
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144 return finder.ExecuteOneResource(target, context, format, retrieveMetadata); |
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145 } |
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146 |
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147 |
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148 // List all the patients, studies, series or instances ---------------------- |
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149 |
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150 static void AnswerListOfResources1(RestApiOutput& output, |
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151 ServerContext& context, |
| 1354 | 152 const std::list<std::string>& resources, |
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153 const std::map<std::string, std::string>& instancesIds, // optional: the id of an instance for each found resource. |
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154 const std::map<std::string, boost::shared_ptr<DicomMap> >& resourcesMainDicomTags, // optional: all tags read from DB for a resource (current level and upper levels) |
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155 const std::map<std::string, boost::shared_ptr<Json::Value> >& resourcesDicomAsJson, // optional: the dicom-as-json for each resource |
| 1354 | 156 ResourceType level, |
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157 bool expand, |
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158 DicomToJsonFormat format, |
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159 const std::set<DicomTag>& requestedTags, |
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160 bool allowStorageAccess) |
| 1354 | 161 { |
| 162 Json::Value answer = Json::arrayValue; | |
| 163 | |
| 164 for (std::list<std::string>::const_iterator | |
| 1384 | 165 resource = resources.begin(); resource != resources.end(); ++resource) |
| 1354 | 166 { |
| 167 if (expand) | |
| 168 { | |
| 4554 | 169 Json::Value expanded; |
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170 |
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171 std::map<std::string, std::string>::const_iterator instanceId = instancesIds.find(*resource); |
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172 if (instanceId != instancesIds.end()) // if it is found in instancesIds, it is also in resourcesDicomAsJson and mainDicomTags |
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173 { |
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174 // reuse data already collected before (e.g during lookup) |
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175 std::map<std::string, boost::shared_ptr<DicomMap> >::const_iterator mainDicomTags = resourcesMainDicomTags.find(*resource); |
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176 std::map<std::string, boost::shared_ptr<Json::Value> >::const_iterator dicomAsJson = resourcesDicomAsJson.find(*resource); |
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177 |
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178 context.ExpandResource(expanded, *resource, |
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179 *(mainDicomTags->second.get()), |
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180 instanceId->second, |
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181 dicomAsJson->second.get(), |
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182 level, format, requestedTags, allowStorageAccess); |
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183 } |
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184 else |
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185 { |
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186 context.ExpandResource(expanded, *resource, level, format, requestedTags, allowStorageAccess); |
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187 } |
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188 |
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189 if (expanded.type() == Json::objectValue) |
| 1354 | 190 { |
| 4554 | 191 answer.append(expanded); |
| 1354 | 192 } |
| 193 } | |
| 194 else | |
| 195 { | |
| 196 answer.append(*resource); | |
| 197 } | |
| 198 } | |
| 199 | |
| 200 output.AnswerJson(answer); | |
| 201 } | |
| 202 | |
| 203 | |
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204 static void AnswerListOfResources2(RestApiOutput& output, |
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205 ServerContext& context, |
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206 const std::list<std::string>& resources, |
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207 ResourceType level, |
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208 bool expand, |
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209 DicomToJsonFormat format, |
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210 const std::set<DicomTag>& requestedTags, |
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211 bool allowStorageAccess) |
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212 { |
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213 std::map<std::string, std::string> unusedInstancesIds; |
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214 std::map<std::string, boost::shared_ptr<DicomMap> > unusedResourcesMainDicomTags; |
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215 std::map<std::string, boost::shared_ptr<Json::Value> > unusedResourcesDicomAsJson; |
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216 |
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217 AnswerListOfResources1(output, context, resources, unusedInstancesIds, unusedResourcesMainDicomTags, unusedResourcesDicomAsJson, level, expand, format, requestedTags, allowStorageAccess); |
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218 } |
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219 |
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220 |
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221 template <enum ResourceType resourceType> |
| 974 | 222 static void ListResources(RestApiGetCall& call) |
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223 { |
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224 if (call.IsDocumentation()) |
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225 { |
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226 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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227 OrthancRestApi::DocumentRequestedTags(call); |
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228 |
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229 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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230 call.GetDocumentation() |
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231 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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232 .SetSummary("List the available " + resources) |
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233 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
| 4403 | 234 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
| 235 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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236 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
| 4403 | 237 "If present, retrieve detailed information about the individual " + resources, false) |
| 4404 | 238 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 239 "about the reported " + resources + " (if `expand` argument is provided)") | |
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240 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/" + resources + "?since=0&limit=2", true); |
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241 return; |
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242 } |
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243 |
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244 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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245 ServerContext& context = OrthancRestApi::GetContext(call); |
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246 |
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247 if (true) |
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248 { |
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249 /** |
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250 * EXPERIMENTAL VERSION |
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251 **/ |
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252 |
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253 // TODO-FIND: include the FindRequest options parsing in a method (parse from get-arguments and from post payload) |
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254 // TODO-FIND: support other values for expand like expand=MainDicomTags,Labels,Parent,SeriesStatus |
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255 const bool expand = (call.HasArgument("expand") && |
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256 call.GetBooleanArgument("expand", true)); |
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257 |
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258 std::set<DicomTag> requestedTags; |
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259 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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260 |
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261 ResourceFinder finder(resourceType, expand); |
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262 finder.AddRequestedTags(requestedTags); |
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263 |
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264 if (call.HasArgument("limit") || |
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265 call.HasArgument("since")) |
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266 { |
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267 if (!call.HasArgument("limit")) |
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268 { |
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269 throw OrthancException(ErrorCode_BadRequest, |
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270 "Missing \"limit\" argument for GET request against: " + |
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271 call.FlattenUri()); |
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272 } |
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273 |
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274 if (!call.HasArgument("since")) |
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275 { |
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276 throw OrthancException(ErrorCode_BadRequest, |
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277 "Missing \"since\" argument for GET request against: " + |
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278 call.FlattenUri()); |
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279 } |
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280 |
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281 uint64_t since = boost::lexical_cast<uint64_t>(call.GetArgument("since", "")); |
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282 uint64_t limit = boost::lexical_cast<uint64_t>(call.GetArgument("limit", "")); |
| 5693 | 283 finder.SetLimitsSince(since); |
| 284 finder.SetLimitsCount(limit); | |
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285 } |
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286 |
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287 Json::Value answer; |
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288 finder.Execute(answer, context, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), false /* no "Metadata" field */); |
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289 call.GetOutput().AnswerJson(answer); |
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290 } |
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291 else |
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292 { |
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293 /** |
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294 * VERSION IN ORTHANC <= 1.12.4 |
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295 **/ |
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296 |
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297 std::list<std::string> result; |
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298 |
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299 std::set<DicomTag> requestedTags; |
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300 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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301 |
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302 if (call.HasArgument("limit") || |
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303 call.HasArgument("since")) |
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304 { |
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305 if (!call.HasArgument("limit")) |
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306 { |
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307 throw OrthancException(ErrorCode_BadRequest, |
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308 "Missing \"limit\" argument for GET request against: " + |
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309 call.FlattenUri()); |
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310 } |
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311 |
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312 if (!call.HasArgument("since")) |
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313 { |
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314 throw OrthancException(ErrorCode_BadRequest, |
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315 "Missing \"since\" argument for GET request against: " + |
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316 call.FlattenUri()); |
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317 } |
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318 |
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319 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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320 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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321 index.GetAllUuids(result, resourceType, since, limit); |
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322 } |
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323 else |
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324 { |
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325 index.GetAllUuids(result, resourceType); |
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326 } |
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327 |
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328 AnswerListOfResources2(call.GetOutput(), context, result, resourceType, call.HasArgument("expand") && call.GetBooleanArgument("expand", true), |
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329 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), |
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330 requestedTags, |
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331 true /* allowStorageAccess */); |
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332 } |
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333 } |
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334 |
| 4409 | 335 |
| 336 | |
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337 template <enum ResourceType resourceType> |
| 974 | 338 static void GetSingleResource(RestApiGetCall& call) |
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339 { |
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340 if (call.IsDocumentation()) |
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341 { |
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342 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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343 OrthancRestApi::DocumentRequestedTags(call); |
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344 |
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345 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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346 call.GetDocumentation() |
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347 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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348 .SetSummary("Get information about some " + resource) |
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349 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 350 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 4409 | 351 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
| 352 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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353 return; |
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354 } |
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355 |
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356 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
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357 |
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358 std::set<DicomTag> requestedTags; |
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359 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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360 |
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361 if (true) |
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362 { |
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363 /** |
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364 * EXPERIMENTAL VERSION |
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365 **/ |
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366 |
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367 ResourceFinder finder(resourceType, true /* expand */); |
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368 finder.AddRequestedTags(requestedTags); |
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369 finder.SetOrthancId(resourceType, call.GetUriComponent("id", "")); |
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370 |
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371 Json::Value json; |
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372 if (finder.ExecuteOneResource(json, OrthancRestApi::GetContext(call), format, false /* no "Metadata" field */)) |
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373 { |
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374 call.GetOutput().AnswerJson(json); |
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375 } |
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376 } |
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377 else |
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378 { |
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379 /** |
|
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380 * VERSION IN ORTHANC <= 1.12.4 |
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381 **/ |
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382 |
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383 Json::Value json; |
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384 if (OrthancRestApi::GetContext(call).ExpandResource( |
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385 json, call.GetUriComponent("id", ""), resourceType, format, requestedTags, true /* allowStorageAccess */)) |
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386 { |
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387 call.GetOutput().AnswerJson(json); |
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388 } |
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389 } |
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390 } |
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391 |
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|
392 template <enum ResourceType resourceType> |
| 974 | 393 static void DeleteSingleResource(RestApiDeleteCall& call) |
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394 { |
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395 if (call.IsDocumentation()) |
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396 { |
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397 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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398 call.GetDocumentation() |
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399 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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400 .SetSummary("Delete some " + resource) |
|
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401 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 402 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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403 return; |
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404 } |
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405 |
|
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406 Json::Value remainingAncestor; |
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407 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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408 { |
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409 call.GetOutput().AnswerJson(remainingAncestor); |
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410 } |
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411 } |
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412 |
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413 |
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414 // Get information about a single patient ----------------------------------- |
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415 |
| 974 | 416 static void IsProtectedPatient(RestApiGetCall& call) |
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417 { |
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418 if (call.IsDocumentation()) |
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419 { |
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420 call.GetDocumentation() |
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421 .SetTag("Patients") |
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422 .SetSummary("Is the patient protected against recycling?") |
| 4404 | 423 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
| 4403 | 424 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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425 return; |
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426 } |
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|
427 |
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428 std::string publicId = call.GetUriComponent("id", ""); |
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429 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
|
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|
430 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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431 } |
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432 |
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433 |
| 974 | 434 static void SetPatientProtection(RestApiPutCall& call) |
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435 { |
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436 if (call.IsDocumentation()) |
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437 { |
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438 call.GetDocumentation() |
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439 .SetTag("Patients") |
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440 .SetSummary("Protect/Unprotect a patient against recycling") |
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441 .SetDescription("Protects a patient by sending `1` or `true` in the payload request. " |
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442 "Unprotects a patient by sending `0` or `false` in the payload requests. " |
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443 "More info: https://orthanc.uclouvain.be/book/faq/features.html#recycling-protection") |
| 4404 | 444 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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445 return; |
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446 } |
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447 |
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448 ServerContext& context = OrthancRestApi::GetContext(call); |
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449 |
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|
450 std::string publicId = call.GetUriComponent("id", ""); |
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451 |
|
4473
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|
452 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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453 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
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|
454 } |
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|
455 |
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|
456 |
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|
457 // Get information about a single instance ---------------------------------- |
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458 |
| 974 | 459 static void GetInstanceFile(RestApiGetCall& call) |
|
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|
460 { |
|
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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|
461 static const char* const TRANSCODE = "transcode"; |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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|
462 |
|
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|
463 if (call.IsDocumentation()) |
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|
464 { |
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|
465 call.GetDocumentation() |
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|
466 .SetTag("Instances") |
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|
467 .SetSummary("Download DICOM") |
|
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|
468 .SetDescription("Download one DICOM instance") |
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|
469 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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|
470 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
|
5426
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471 .SetHttpGetArgument(TRANSCODE, RestApiCallDocumentation::Type_String, |
|
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472 "If present, the DICOM file will be transcoded to the provided " |
|
5432
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diff
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|
473 "transfer syntax: https://orthanc.uclouvain.be/book/faq/transcoding.html", false) |
|
4405
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|
474 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
|
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|
475 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
476 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
477 return; |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
478 } |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
479 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
480 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
481 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
482 std::string publicId = call.GetUriComponent("id", ""); |
|
3203
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
483 |
|
4330
a01b1c9cbef4
moving generic type definitions from IHttpHandler to HttpToolbox
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4294
diff
changeset
|
484 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
|
3203
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
485 if (accept != call.GetHttpHeaders().end()) |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
486 { |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
487 // New in Orthanc 1.5.4 |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
488 try |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
489 { |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
490 MimeType mime = StringToMimeType(accept->second.c_str()); |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
491 |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
492 if (mime == MimeType_DicomWebJson || |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
493 mime == MimeType_DicomWebXml) |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
494 { |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
495 DicomWebJsonVisitor visitor; |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
496 |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
497 { |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
498 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
499 locker.GetDicom().Apply(visitor); |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
500 } |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
501 |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
502 if (mime == MimeType_DicomWebJson) |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
503 { |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
504 std::string s = visitor.GetResult().toStyledString(); |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
505 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
506 } |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
507 else |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
508 { |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
509 std::string xml; |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
510 visitor.FormatXml(xml); |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
511 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
512 } |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
513 |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
514 return; |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
515 } |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
516 } |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
517 catch (OrthancException&) |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
518 { |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
519 } |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
520 } |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
521 |
|
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
522 if (call.HasArgument(TRANSCODE)) |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
523 { |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
524 std::string source; |
| 5427 | 525 std::string attachmentId; |
|
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
526 std::string transcoded; |
| 5427 | 527 context.ReadDicom(source, attachmentId, publicId); |
| 528 | |
| 529 if (context.TranscodeWithCache(transcoded, source, publicId, attachmentId, GetTransferSyntax(call.GetArgument(TRANSCODE, "")))) | |
|
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
530 { |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
531 call.GetOutput().AnswerBuffer(transcoded, MimeType_Dicom); |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
532 } |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
533 } |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
534 else |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
535 { |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
536 // return the attachment without any transcoding |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
537 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
538 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
539 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
540 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
541 |
| 974 | 542 static void ExportInstanceFile(RestApiPostCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
543 { |
| 4421 | 544 if (call.IsDocumentation()) |
| 545 { | |
| 546 call.GetDocumentation() | |
| 547 .SetTag("Instances") | |
| 548 .SetSummary("Write DICOM onto filesystem") | |
|
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
549 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running. This is insecure for " |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
550 "Orthanc servers that are remotely accessible since one could overwrite any system file. " |
|
5275
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
551 "Since Orthanc 1.12.0, this route is disabled by default, but can be enabled using " |
|
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
552 "the `RestApiWriteToFileSystemEnabled` configuration option.") |
| 4421 | 553 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
| 554 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
| 555 return; | |
| 556 } | |
| 557 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
558 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
559 |
|
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
560 if (!context.IsRestApiWriteToFileSystemEnabled()) |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
561 { |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
562 LOG(ERROR) << "The URI /instances/../export is disallowed for security, " |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
563 << "check your configuration option `RestApiWriteToFileSystemEnabled`"; |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
564 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
565 return; |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
566 } |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
567 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
568 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
569 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
570 std::string dicom; |
| 2124 | 571 context.ReadDicom(dicom, publicId); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
572 |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
573 std::string target; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
574 call.BodyToString(target); |
| 2140 | 575 SystemToolbox::WriteFile(dicom, target); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
576 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
577 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
578 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
579 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
580 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
581 template <DicomToJsonFormat format> |
|
5647
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
582 static void GetInstanceTagsInternal(RestApiGetCall& call, |
|
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
583 bool whole) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
584 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
585 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
586 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
587 std::string publicId = call.GetUriComponent("id", ""); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
588 |
|
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
589 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
590 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
5647
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
591 |
|
f048683aa619
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592 if (whole) |
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593 { |
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594 // This is new in Orthanc 1.12.4. Reference: |
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595 // https://discourse.orthanc-server.org/t/private-tags-with-group-7fe0-are-not-provided-via-rest-api/4744 |
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596 const DicomToJsonFlags flags = static_cast<DicomToJsonFlags>(DicomToJsonFlags_Default & ~DicomToJsonFlags_StopAfterPixelData); |
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597 |
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598 Json::Value answer; |
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599 |
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600 { |
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601 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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602 locker.GetDicom().DatasetToJson(answer, format, flags, |
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603 ORTHANC_MAXIMUM_TAG_LENGTH, ignoreTagLength); |
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604 } |
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605 |
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606 call.GetOutput().AnswerJson(answer); |
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607 } |
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608 else |
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609 { |
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610 if (format != DicomToJsonFormat_Full || |
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611 !ignoreTagLength.empty()) |
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612 { |
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613 Json::Value full; |
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614 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
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615 AnswerDicomAsJson(call, full, format); |
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616 } |
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617 else |
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618 { |
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619 // This path allows one to avoid the JSON decoding if no |
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620 // simplification is asked, and if no "ignore-length" argument |
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621 // is present |
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622 Json::Value full; |
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623 context.ReadDicomAsJson(full, publicId); |
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624 call.GetOutput().AnswerJson(full); |
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625 } |
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626 } |
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627 } |
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628 |
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629 |
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630 static void DocumentGetInstanceTags(RestApiGetCall& call) |
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631 { |
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632 call.GetDocumentation() |
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633 .SetTag("Instances") |
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634 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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635 .SetHttpGetArgument( |
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636 IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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637 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
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638 .SetHttpGetArgument( |
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639 ARG_WHOLE, RestApiCallDocumentation::Type_Boolean, "Whether to read the whole DICOM file from the " |
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640 "storage area (new in Orthanc 1.12.4). If set to \"false\" (default value), the DICOM file is read " |
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641 "until the pixel data tag (7fe0,0010) to optimize access to storage. Setting the option " |
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642 "to \"true\" provides access to the DICOM tags stored after the pixel data tag.", false) |
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643 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value"); |
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644 } |
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645 |
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646 |
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647 static void GetInstanceTags(RestApiGetCall& call) |
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648 { |
| 4404 | 649 if (call.IsDocumentation()) |
| 650 { | |
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651 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
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652 DocumentGetInstanceTags(call); |
| 4404 | 653 call.GetDocumentation() |
| 654 .SetSummary("Get DICOM tags") | |
| 655 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
| 656 "combines hexadecimal tags with human-readable description.") | |
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657 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
| 4404 | 658 return; |
| 659 } | |
| 660 | |
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661 const bool whole = call.GetBooleanArgument(ARG_WHOLE, false); |
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662 |
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663 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
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664 { |
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665 case DicomToJsonFormat_Human: |
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666 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call, whole); |
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667 break; |
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668 |
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669 case DicomToJsonFormat_Short: |
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670 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call, whole); |
|
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671 break; |
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672 |
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673 case DicomToJsonFormat_Full: |
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674 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call, whole); |
|
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675 break; |
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676 |
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677 default: |
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678 throw OrthancException(ErrorCode_InternalError); |
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679 } |
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680 } |
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|
681 |
|
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682 |
|
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683 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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684 { |
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685 if (call.IsDocumentation()) |
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686 { |
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687 DocumentGetInstanceTags(call); |
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688 call.GetDocumentation() |
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689 .SetSummary("Get human-readable tags") |
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690 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
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691 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
692 return; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
693 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
694 else |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
695 { |
|
5647
f048683aa619
added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5640
diff
changeset
|
696 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call, call.GetBooleanArgument(ARG_WHOLE, false)); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
697 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
698 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
699 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
700 |
| 974 | 701 static void ListFrames(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
702 { |
| 4414 | 703 if (call.IsDocumentation()) |
| 704 { | |
| 705 call.GetDocumentation() | |
| 706 .SetTag("Instances") | |
| 707 .SetSummary("List available frames") | |
| 708 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
| 709 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 710 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
711 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); |
| 4414 | 712 return; |
| 713 } | |
| 714 | |
|
1950
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
715 std::string publicId = call.GetUriComponent("id", ""); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
716 |
|
1950
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
717 unsigned int numberOfFrames; |
|
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
718 |
|
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
719 { |
|
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
720 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
721 numberOfFrames = locker.GetDicom().GetFramesCount(); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
722 } |
|
1950
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
723 |
|
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
724 Json::Value result = Json::arrayValue; |
|
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
725 for (unsigned int i = 0; i < numberOfFrames; i++) |
|
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
726 { |
|
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
727 result.append(i); |
|
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
728 } |
|
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
729 |
|
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
730 call.GetOutput().AnswerJson(result); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
731 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
732 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
733 |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
734 namespace |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
735 { |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
736 class ImageToEncode |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
737 { |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
738 private: |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
739 std::unique_ptr<ImageAccessor>& image_; |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
740 ImageExtractionMode mode_; |
|
2281
e002430baa41
Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
741 bool invert_; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
742 MimeType format_; |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
743 std::string answer_; |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
744 |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
745 public: |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
746 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
|
2281
e002430baa41
Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
747 ImageExtractionMode mode, |
|
e002430baa41
Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
748 bool invert) : |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
749 image_(image), |
|
2281
e002430baa41
Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
750 mode_(mode), |
| 4205 | 751 invert_(invert), |
| 752 format_(MimeType_Binary) | |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
753 { |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
754 } |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
755 |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
756 void Answer(RestApiOutput& output) |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
757 { |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
758 output.AnswerBuffer(answer_, format_); |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
759 } |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
760 |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
761 void EncodeUsingPng() |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
762 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
763 format_ = MimeType_Png; |
|
2281
e002430baa41
Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
764 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
765 } |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
766 |
|
2699
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
parents:
2622
diff
changeset
|
767 void EncodeUsingPam() |
|
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
parents:
2622
diff
changeset
|
768 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
769 format_ = MimeType_Pam; |
|
2699
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
parents:
2622
diff
changeset
|
770 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
|
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
parents:
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diff
changeset
|
771 } |
|
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
parents:
2622
diff
changeset
|
772 |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
773 void EncodeUsingJpeg(uint8_t quality) |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
774 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
775 format_ = MimeType_Jpeg; |
|
2281
e002430baa41
Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
776 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
|
1824
b530c3dfe2a6
refactoring image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1784
diff
changeset
|
777 } |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
778 }; |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
779 |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
780 class EncodePng : public HttpContentNegociation::IHandler |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
781 { |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
782 private: |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
783 ImageToEncode& image_; |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
784 |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
785 public: |
| 4205 | 786 explicit EncodePng(ImageToEncode& image) : image_(image) |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
787 { |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
788 } |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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parents:
1773
diff
changeset
|
789 |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
790 virtual void Handle(const std::string& type, |
|
5338
78c59b02b121
accept parameters are now provided to HttpContentNegociation::IHandler::Handle()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5275
diff
changeset
|
791 const std::string& subtype, |
|
78c59b02b121
accept parameters are now provided to HttpContentNegociation::IHandler::Handle()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5275
diff
changeset
|
792 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
793 { |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
794 assert(type == "image"); |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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parents:
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diff
changeset
|
795 assert(subtype == "png"); |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
796 image_.EncodeUsingPng(); |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
797 } |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
798 }; |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
799 |
|
2699
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
parents:
2622
diff
changeset
|
800 class EncodePam : public HttpContentNegociation::IHandler |
|
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
parents:
2622
diff
changeset
|
801 { |
|
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
parents:
2622
diff
changeset
|
802 private: |
|
52217dc47a4e
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|
803 ImageToEncode& image_; |
|
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804 |
|
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|
805 public: |
| 4205 | 806 explicit EncodePam(ImageToEncode& image) : image_(image) |
|
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807 { |
|
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808 } |
|
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|
809 |
|
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|
810 virtual void Handle(const std::string& type, |
|
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811 const std::string& subtype, |
|
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812 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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813 { |
|
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|
814 assert(type == "image"); |
| 2780 | 815 assert(subtype == "x-portable-arbitrarymap"); |
|
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816 image_.EncodeUsingPam(); |
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817 } |
|
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818 }; |
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819 |
|
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|
820 class EncodeJpeg : public HttpContentNegociation::IHandler |
|
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821 { |
|
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822 private: |
|
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823 ImageToEncode& image_; |
|
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|
824 unsigned int quality_; |
|
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825 |
|
1784
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826 public: |
|
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827 EncodeJpeg(ImageToEncode& image, |
|
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828 const RestApiGetCall& call) : |
|
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829 image_(image) |
|
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830 { |
|
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831 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
|
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832 bool ok = false; |
|
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|
833 |
|
1784
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834 try |
|
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835 { |
|
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|
836 quality_ = boost::lexical_cast<unsigned int>(v); |
| 1847 | 837 ok = (quality_ >= 1 && quality_ <= 100); |
|
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838 } |
|
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|
839 catch (boost::bad_lexical_cast&) |
|
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840 { |
|
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|
841 } |
|
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|
842 |
|
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|
843 if (!ok) |
|
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|
844 { |
| 2955 | 845 throw OrthancException( |
| 846 ErrorCode_BadRequest, | |
| 847 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
|
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848 } |
|
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849 } |
|
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|
850 |
|
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|
851 virtual void Handle(const std::string& type, |
|
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|
852 const std::string& subtype, |
|
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|
853 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
|
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|
854 { |
|
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|
855 assert(type == "image"); |
|
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|
856 assert(subtype == "jpeg"); |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
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diff
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|
857 image_.EncodeUsingJpeg(quality_); |
|
1784
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|
858 } |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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|
859 }; |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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diff
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|
860 } |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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|
861 |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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|
862 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
863 namespace |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
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diff
changeset
|
864 { |
|
3683
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|
865 class IDecodedFrameHandler : public boost::noncopyable |
|
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|
866 { |
|
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|
867 public: |
|
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|
868 virtual ~IDecodedFrameHandler() |
|
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|
869 { |
|
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|
870 } |
|
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|
871 |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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|
872 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
|
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|
873 virtual void Handle(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
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diff
changeset
|
874 std::unique_ptr<ImageAccessor>& decoded, |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
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|
875 const ParsedDicomFile* dicom, |
|
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|
876 unsigned int frame) = 0; |
|
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|
877 |
|
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|
878 virtual bool RequiresDicomTags() const = 0; |
|
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|
879 |
|
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|
880 static void Apply(RestApiGetCall& call, |
|
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|
881 IDecodedFrameHandler& handler, |
|
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|
882 ImageExtractionMode mode /* for generation of documentation */, |
|
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|
883 bool isRendered /* for generation of documentation */) |
|
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|
884 { |
|
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|
885 if (call.IsDocumentation()) |
|
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|
886 { |
|
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|
887 std::string m; |
|
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|
888 if (!isRendered) |
|
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|
889 { |
|
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|
890 switch (mode) |
|
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|
891 { |
|
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|
892 case ImageExtractionMode_Preview: |
|
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|
893 m = "preview"; |
|
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|
894 break; |
|
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|
895 case ImageExtractionMode_UInt8: |
|
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|
896 m = "uint8"; |
|
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|
897 break; |
|
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|
898 case ImageExtractionMode_UInt16: |
|
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|
899 m = "uint16"; |
|
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|
900 break; |
|
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|
901 case ImageExtractionMode_Int16: |
|
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902 m = "int16"; |
|
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|
903 break; |
|
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|
904 default: |
|
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|
905 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
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|
906 } |
|
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|
907 } |
|
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|
908 |
|
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|
909 std::string description; |
|
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|
910 std::string verb = (isRendered ? "Render" : "Decode"); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
911 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
912 if (call.HasUriComponent("frame")) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
913 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
914 description = verb + " one frame of interest from the given DICOM instance."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
915 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
916 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
917 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
918 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
919 else |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
920 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
921 description = verb + " the first frame of the given DICOM instance."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
922 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
923 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
924 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
925 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
926 if (isRendered) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
927 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
928 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
929 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
930 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
931 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
932 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
933 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
934 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
935 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
936 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
937 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
938 else |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
939 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
940 switch (mode) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
941 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
942 case ImageExtractionMode_Preview: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
943 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
944 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
945 case ImageExtractionMode_UInt8: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
946 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
947 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
948 case ImageExtractionMode_UInt16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
949 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
950 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
951 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
952 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
953 "Negative values must be interpreted according to two's complement."); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
954 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
955 default: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
956 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
957 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
958 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
959 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
960 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
961 .SetTag("Instances") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
962 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
963 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
964 .SetHttpGetArgument("returnUnsupportedImage", RestApiCallDocumentation::Type_Boolean, "Returns an unsupported.png placeholder image if unable to provide the image instead of returning a 415 HTTP error (defaults to false)", false) |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
965 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
966 .AddAnswerType(MimeType_Png, "PNG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
967 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
968 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
969 .SetDescription(description); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
970 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
971 return; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
972 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
973 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
974 ServerContext& context = OrthancRestApi::GetContext(call); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
975 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
976 std::string frameId = call.GetUriComponent("frame", "0"); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
977 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
978 unsigned int frame; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
979 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
980 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
981 frame = boost::lexical_cast<unsigned int>(frameId); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
982 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
983 catch (boost::bad_lexical_cast&) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
984 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
985 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
986 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
987 |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
988 std::unique_ptr<ImageAccessor> decoded; |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
989 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
990 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
991 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
992 std::string publicId = call.GetUriComponent("id", ""); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
993 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
994 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
995 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
996 if (decoded.get() == NULL) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
997 { |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
998 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
999 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1000 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1001 |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1002 if (handler.RequiresDicomTags()) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1003 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1004 /** |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1005 * Retrieve a summary of the DICOM tags, which is |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1006 * necessary to deal with MONOCHROME1 photometric |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1007 * interpretation, and with windowing parameters. |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1008 **/ |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1009 ServerContext::DicomCacheLocker locker(context, publicId); |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
1010 handler.Handle(call, decoded, &locker.GetDicom(), frame); |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1011 } |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1012 else |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1013 { |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
1014 handler.Handle(call, decoded, NULL, frame); |
|
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|
1015 } |
|
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|
1016 } |
|
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diff
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|
1017 catch (OrthancException& e) |
|
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|
1018 { |
|
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diff
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|
1019 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
|
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|
1020 e.GetErrorCode() == ErrorCode_UnknownResource) |
|
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|
1021 { |
|
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diff
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|
1022 // The frame number is out of the range for this DICOM |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1023 // instance, the resource is not existent |
|
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|
1024 } |
|
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|
1025 else |
|
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|
1026 { |
|
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|
1027 if (call.HasArgument("returnUnsupportedImage")) |
|
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|
1028 { |
|
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|
1029 std::string root = ""; |
|
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Alain Mazy <am@osimis.io>
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|
1030 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
|
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|
1031 { |
|
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diff
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|
1032 root += "../"; |
|
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|
1033 } |
|
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|
1034 |
|
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diff
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|
1035 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
|
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|
1036 } |
|
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|
1037 else |
|
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|
1038 { |
|
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|
1039 call.GetOutput().SignalError(HttpStatus_415_UnsupportedMediaType); |
|
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|
1040 } |
|
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1041 } |
|
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|
1042 return; |
|
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|
1043 } |
|
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|
1044 |
|
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|
1045 } |
|
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|
1046 |
|
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|
1047 |
|
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changeset
|
1048 static void DefaultHandler(RestApiGetCall& call, |
|
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|
1049 std::unique_ptr<ImageAccessor>& decoded, |
|
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|
1050 ImageExtractionMode mode, |
|
2cc34837d694
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|
1051 bool invert) |
|
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|
1052 { |
|
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|
1053 ImageToEncode image(decoded, mode, invert); |
|
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|
1054 |
|
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|
1055 HttpContentNegociation negociation; |
|
2cc34837d694
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1056 EncodePng png(image); |
|
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|
1057 negociation.Register(MIME_PNG, png); |
|
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1058 |
|
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|
1059 EncodeJpeg jpeg(image, call); |
|
2cc34837d694
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|
1060 negociation.Register(MIME_JPEG, jpeg); |
|
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|
1061 |
|
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|
1062 EncodePam pam(image); |
|
2cc34837d694
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|
1063 negociation.Register(MIME_PAM, pam); |
|
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|
1064 |
|
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|
1065 if (negociation.Apply(call.GetHttpHeaders())) |
|
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|
1066 { |
|
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|
1067 image.Answer(call.GetOutput()); |
|
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1068 } |
|
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|
1069 } |
|
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|
1070 }; |
|
3600
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|
1071 |
|
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|
1072 |
|
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1073 class GetImageHandler : public IDecodedFrameHandler |
|
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1074 { |
|
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1075 private: |
|
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|
1076 ImageExtractionMode mode_; |
|
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1077 |
|
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|
1078 public: |
| 4205 | 1079 explicit GetImageHandler(ImageExtractionMode mode) : |
|
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|
1080 mode_(mode) |
|
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1081 { |
|
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1082 } |
|
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1083 |
|
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|
1084 virtual void Handle(RestApiGetCall& call, |
|
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|
1085 std::unique_ptr<ImageAccessor>& decoded, |
|
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|
1086 const ParsedDicomFile* dicom, |
|
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|
1087 unsigned int frame) ORTHANC_OVERRIDE |
|
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|
1088 { |
|
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|
1089 bool invert = false; |
|
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1090 |
|
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1091 if (mode_ == ImageExtractionMode_Preview) |
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|
1092 { |
|
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|
1093 if (dicom == NULL) |
|
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|
1094 { |
|
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|
1095 throw OrthancException(ErrorCode_InternalError); |
|
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|
1096 } |
|
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|
1097 |
|
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|
1098 DicomMap tags; |
|
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changeset
|
1099 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
|
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|
1100 |
|
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|
1101 DicomImageInformation info(tags); |
|
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1102 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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1103 } |
|
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1104 |
|
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|
1105 DefaultHandler(call, decoded, mode_, invert); |
|
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1106 } |
|
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1107 |
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1108 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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1109 { |
|
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1110 return mode_ == ImageExtractionMode_Preview; |
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1111 } |
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1112 }; |
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1113 |
|
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|
1114 |
|
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|
1115 class RenderedFrameHandler : public IDecodedFrameHandler |
|
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|
1116 { |
|
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|
1117 private: |
|
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changeset
|
1118 static void GetUserArguments(double& windowWidth /* inout */, |
|
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|
1119 double& windowCenter /* inout */, |
|
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|
1120 unsigned int& argWidth, |
|
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|
1121 unsigned int& argHeight, |
|
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|
1122 bool& smooth, |
| 4205 | 1123 const RestApiGetCall& call) |
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1124 { |
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1125 static const char* ARG_WINDOW_CENTER = "window-center"; |
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1126 static const char* ARG_WINDOW_WIDTH = "window-width"; |
|
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1127 static const char* ARG_WIDTH = "width"; |
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1128 static const char* ARG_HEIGHT = "height"; |
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1129 static const char* ARG_SMOOTH = "smooth"; |
|
3600
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1130 |
|
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1131 if (call.HasArgument(ARG_WINDOW_WIDTH) && |
|
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1132 !SerializationToolbox::ParseDouble(windowWidth, call.GetArgument(ARG_WINDOW_WIDTH, ""))) |
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1133 { |
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1134 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1135 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
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1136 } |
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1137 |
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1138 if (call.HasArgument(ARG_WINDOW_CENTER) && |
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1139 !SerializationToolbox::ParseDouble(windowCenter, call.GetArgument(ARG_WINDOW_CENTER, ""))) |
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1140 { |
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1141 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1142 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
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1143 } |
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1144 |
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1145 argWidth = 0; |
|
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1146 argHeight = 0; |
|
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1147 |
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1148 if (call.HasArgument(ARG_WIDTH)) |
|
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1149 { |
|
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1150 try |
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1151 { |
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1152 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
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1153 if (tmp < 0) |
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1154 { |
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1155 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1156 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
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1157 } |
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1158 else |
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1159 { |
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1160 argWidth = static_cast<unsigned int>(tmp); |
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1161 } |
|
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1162 } |
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1163 catch (boost::bad_lexical_cast&) |
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1164 { |
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1165 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1166 "Bad value for argument: " + std::string(ARG_WIDTH)); |
|
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1167 } |
|
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1168 } |
|
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|
1169 |
|
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|
1170 if (call.HasArgument(ARG_HEIGHT)) |
|
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|
1171 { |
|
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|
1172 try |
|
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|
1173 { |
|
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1174 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
|
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1175 if (tmp < 0) |
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|
1176 { |
|
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1177 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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1178 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
|
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1179 } |
|
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1180 else |
|
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|
1181 { |
|
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1182 argHeight = static_cast<unsigned int>(tmp); |
|
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1183 } |
|
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1184 } |
|
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|
1185 catch (boost::bad_lexical_cast&) |
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1186 { |
|
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1187 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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1188 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
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1189 } |
|
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1190 } |
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1191 |
|
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1192 smooth = false; |
|
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1193 |
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1194 if (call.HasArgument(ARG_SMOOTH)) |
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1195 { |
|
4473
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1196 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
|
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1197 } |
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1198 } |
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1199 |
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1200 |
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1201 public: |
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1202 virtual void Handle(RestApiGetCall& call, |
|
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1203 std::unique_ptr<ImageAccessor>& decoded, |
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1204 const ParsedDicomFile* dicom, |
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1205 unsigned int frame) ORTHANC_OVERRIDE |
|
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1206 { |
|
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1207 if (dicom == NULL) |
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1208 { |
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1209 throw OrthancException(ErrorCode_InternalError); |
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1210 } |
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1211 |
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1212 PhotometricInterpretation photometric; |
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1213 const bool invert = (dicom->LookupPhotometricInterpretation(photometric) && |
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1214 photometric == PhotometricInterpretation_Monochrome1); |
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1215 |
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1216 double rescaleIntercept, rescaleSlope, windowCenter, windowWidth; |
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1217 dicom->GetRescale(rescaleIntercept, rescaleSlope, frame); |
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1218 dicom->GetDefaultWindowing(windowCenter, windowWidth, frame); |
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1219 |
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1220 unsigned int argWidth, argHeight; |
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1221 bool smooth; |
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1222 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
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1223 |
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1224 unsigned int targetWidth = decoded->GetWidth(); |
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1225 unsigned int targetHeight = decoded->GetHeight(); |
| 3686 | 1226 |
| 1227 if (decoded->GetWidth() != 0 && | |
| 1228 decoded->GetHeight() != 0) | |
| 1229 { | |
| 1230 float ratio = 1; | |
| 1231 | |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1232 if (argWidth != 0 && |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1233 argHeight != 0) |
| 3686 | 1234 { |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1235 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1236 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1237 ratio = std::min(ratioX, ratioY); |
| 3686 | 1238 } |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1239 else if (argWidth != 0) |
| 3686 | 1240 { |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1241 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
| 3686 | 1242 } |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1243 else if (argHeight != 0) |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1244 { |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1245 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1246 } |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1247 |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1248 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1249 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
| 3686 | 1250 } |
| 1251 | |
|
5054
255b02c68908
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
5048
diff
changeset
|
1252 if (decoded->GetFormat() == PixelFormat_RGB24 || decoded->GetFormat() == PixelFormat_RGB48) |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1253 { |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1254 if (targetWidth == decoded->GetWidth() && |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1255 targetHeight == decoded->GetHeight()) |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1256 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1257 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1258 } |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1259 else |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1260 { |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
1261 std::unique_ptr<ImageAccessor> resized( |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1262 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1263 |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1264 if (smooth && |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1265 (targetWidth < decoded->GetWidth() || |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1266 targetHeight < decoded->GetHeight())) |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1267 { |
|
4065
d6362b2c4b61
export dcmdata in shared library, rounding in convolution tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4055
diff
changeset
|
1268 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1269 } |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1270 |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1271 ImageProcessing::Resize(*resized, *decoded); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1272 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1273 } |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1274 } |
| 3686 | 1275 else |
| 1276 { | |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1277 // Grayscale image: (1) convert to Float32, (2) apply |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1278 // windowing to get a Grayscale8, (3) possibly resize |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1279 |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1280 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1281 ImageProcessing::Convert(converted, *decoded); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1282 |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1283 // Avoid divisions by zero |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1284 if (windowWidth <= 1.0f) |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1285 { |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1286 windowWidth = 1; |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1287 } |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1288 |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1289 if (std::abs(rescaleSlope) <= 0.0001) |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1290 { |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1291 rescaleSlope = 0.0001; |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
1292 } |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1293 |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
1294 const double scaling = 255.0 * rescaleSlope / windowWidth; |
|
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
1295 const double offset = (rescaleIntercept - windowCenter + windowWidth / 2.0) / rescaleSlope; |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1296 |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
1297 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
1298 ImageProcessing::ShiftScale(*rescaled, converted, static_cast<float>(offset), static_cast<float>(scaling), false); |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1299 |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1300 if (targetWidth == decoded->GetWidth() && |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1301 targetHeight == decoded->GetHeight()) |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1302 { |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1303 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1304 } |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1305 else |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1306 { |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
1307 std::unique_ptr<ImageAccessor> resized( |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1308 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1309 |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1310 if (smooth && |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1311 (targetWidth < decoded->GetWidth() || |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1312 targetHeight < decoded->GetHeight())) |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1313 { |
|
4065
d6362b2c4b61
export dcmdata in shared library, rounding in convolution tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4055
diff
changeset
|
1314 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1315 } |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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parents:
3687
diff
changeset
|
1316 |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1317 ImageProcessing::Resize(*resized, *rescaled); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1318 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
|
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1319 } |
| 3686 | 1320 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1321 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1322 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1323 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
1324 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1325 return true; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1326 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1327 }; |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
1328 } |
|
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
1329 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1330 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1331 template <enum ImageExtractionMode mode> |
| 974 | 1332 static void GetImage(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1333 { |
|
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3816
diff
changeset
|
1334 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3816
diff
changeset
|
1335 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1336 GetImageHandler handler(mode); |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
1337 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
|
3683
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skeleton for new route: /instances/{id}/rendered
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|
1338 } |
|
1906
d7c1cb559431
optimization for multi-frame images
Sebastien Jodogne <s.jodogne@gmail.com>
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1339 |
|
1826
ac5b0b4e2434
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1340 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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|
1341 static void GetRenderedFrame(RestApiGetCall& call) |
|
12253ddefe5a
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|
1342 { |
|
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
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|
1343 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
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|
1344 |
|
3683
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|
1345 RenderedFrameHandler handler; |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1346 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
|
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1347 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1348 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1349 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1350 static void DocumentSharedNumpy(RestApiGetCall& call) |
|
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1351 { |
|
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|
1352 call.GetDocumentation() |
|
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|
1353 .SetUriArgument("id", "Orthanc identifier of the DICOM resource of interest") |
|
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|
1354 .SetHttpGetArgument("compress", RestApiCallDocumentation::Type_Boolean, "Compress the file as `.npz`", false) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1355 .SetHttpGetArgument("rescale", RestApiCallDocumentation::Type_Boolean, |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1356 "On grayscale images, apply the rescaling and return floating-point values", false) |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1357 .AddAnswerType(MimeType_PlainText, "Numpy file: https://numpy.org/devdocs/reference/generated/numpy.lib.format.html"); |
|
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|
1358 } |
|
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|
1359 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1360 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1361 namespace |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1362 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1363 class NumpyVisitor : public boost::noncopyable |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1364 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1365 private: |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1366 bool rescale_; |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1367 unsigned int depth_; |
|
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diff
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|
1368 unsigned int currentDepth_; |
| 4858 | 1369 unsigned int width_; |
|
4834
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1370 unsigned int height_; |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1371 PixelFormat format_; |
|
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download of numpy arrays from the REST API
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|
1372 ChunkedBuffer buffer_; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1373 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1374 public: |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1375 NumpyVisitor(unsigned int depth /* can be zero if 2D frame */, |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1376 bool rescale) : |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1377 rescale_(rescale), |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1378 depth_(depth), |
| 4858 | 1379 currentDepth_(0), |
| 1380 width_(0), // dummy initialization | |
| 1381 height_(0), // dummy initialization | |
| 1382 format_(PixelFormat_Grayscale8) // dummy initialization | |
|
4834
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1383 { |
|
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|
1384 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1385 |
| 4858 | 1386 void WriteFrame(const ParsedDicomFile& dicom, |
|
4834
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1387 unsigned int frame) |
|
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|
1388 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1389 std::unique_ptr<ImageAccessor> decoded(dicom.DecodeFrame(frame)); |
|
bec432ee1094
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diff
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|
1390 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1391 if (decoded.get() == NULL) |
|
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|
1392 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1393 throw OrthancException(ErrorCode_NotImplemented, "Cannot decode DICOM instance"); |
|
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|
1394 } |
|
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|
1395 |
|
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diff
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|
1396 if (currentDepth_ == 0) |
|
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|
1397 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1398 width_ = decoded->GetWidth(); |
|
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diff
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|
1399 height_ = decoded->GetHeight(); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1400 format_ = decoded->GetFormat(); |
|
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|
1401 } |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1402 else if (width_ != decoded->GetWidth() || |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1403 height_ != decoded->GetHeight()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1404 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1405 throw OrthancException(ErrorCode_IncompatibleImageSize, "The size of the frames varies across the instance(s)"); |
|
bec432ee1094
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diff
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|
1406 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1407 else if (format_ != decoded->GetFormat()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1408 { |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1409 throw OrthancException(ErrorCode_IncompatibleImageFormat, "The pixel format of the frames varies across the instance(s)"); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1410 } |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1411 |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1412 if (rescale_ && |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1413 decoded->GetFormat() != PixelFormat_RGB24) |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1414 { |
|
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diff
changeset
|
1415 if (currentDepth_ == 0) |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1416 { |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1417 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, PixelFormat_Float32); |
|
bec432ee1094
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|
1418 } |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1419 |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1420 double rescaleIntercept, rescaleSlope; |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1421 dicom.GetRescale(rescaleIntercept, rescaleSlope, frame); |
|
bec432ee1094
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diff
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|
1422 |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1423 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1424 ImageProcessing::Convert(converted, *decoded); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1425 ImageProcessing::ShiftScale2(converted, static_cast<float>(rescaleIntercept), static_cast<float>(rescaleSlope), false); |
|
bec432ee1094
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|
1426 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1427 NumpyWriter::WritePixels(buffer_, converted); |
|
bec432ee1094
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|
1428 } |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1429 else |
|
bec432ee1094
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|
1430 { |
|
bec432ee1094
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diff
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|
1431 if (currentDepth_ == 0) |
|
bec432ee1094
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|
1432 { |
|
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|
1433 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, format_); |
|
bec432ee1094
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|
1434 } |
|
bec432ee1094
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|
1435 |
|
bec432ee1094
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|
1436 NumpyWriter::WritePixels(buffer_, *decoded); |
|
bec432ee1094
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|
1437 } |
|
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|
1438 |
|
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|
1439 currentDepth_ ++; |
|
bec432ee1094
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|
1440 } |
|
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|
1441 |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1442 void Answer(RestApiOutput& output, |
|
bec432ee1094
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|
1443 bool compress) |
|
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|
1444 { |
|
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|
1445 if ((depth_ == 0 && currentDepth_ != 1) || |
|
bec432ee1094
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|
1446 (depth_ != 0 && currentDepth_ != depth_)) |
|
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changeset
|
1447 { |
|
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changeset
|
1448 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1449 } |
|
bec432ee1094
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|
1450 else |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1451 { |
|
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diff
changeset
|
1452 std::string answer; |
|
bec432ee1094
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changeset
|
1453 NumpyWriter::Finalize(answer, buffer_, compress); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1454 output.AnswerBuffer(answer, MimeType_Binary); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1455 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1456 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1457 }; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1458 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1459 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1460 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1461 static void GetNumpyFrame(RestApiGetCall& call) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1462 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1463 if (call.IsDocumentation()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1464 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1465 DocumentSharedNumpy(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1466 call.GetDocumentation() |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1467 .SetTag("Instances") |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1468 .SetSummary("Decode frame for numpy") |
|
4836
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1469 .SetDescription("Decode one frame of interest from the given DICOM instance, for use with numpy in Python. " |
|
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1470 "The numpy array has 3 dimensions: (height, width, color channel).") |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1471 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1472 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1473 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1474 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1475 const std::string instanceId = call.GetUriComponent("id", ""); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1476 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1477 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1478 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1479 uint32_t frame; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1480 if (!SerializationToolbox::ParseUnsignedInteger32(frame, call.GetUriComponent("frame", "0"))) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1481 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1482 throw OrthancException(ErrorCode_ParameterOutOfRange, "Expected an unsigned integer for the \"frame\" argument"); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1483 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1484 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1485 NumpyVisitor visitor(0 /* no depth, 2D frame */, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1486 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1487 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1488 Semaphore::Locker throttling(throttlingSemaphore_); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1489 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1490 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1491 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1492 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1493 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1494 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1495 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1496 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1497 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1498 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1499 static void GetNumpyInstance(RestApiGetCall& call) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1500 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1501 if (call.IsDocumentation()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1502 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1503 DocumentSharedNumpy(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1504 call.GetDocumentation() |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1505 .SetTag("Instances") |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1506 .SetSummary("Decode instance for numpy") |
|
4836
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1507 .SetDescription("Decode the given DICOM instance, for use with numpy in Python. " |
|
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1508 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1509 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1510 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1511 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1512 const std::string instanceId = call.GetUriComponent("id", ""); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1513 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1514 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1515 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1516 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1517 Semaphore::Locker throttling(throttlingSemaphore_); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1518 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1519 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1520 const unsigned int depth = locker.GetDicom().GetFramesCount(); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1521 if (depth == 0) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1522 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1523 throw OrthancException(ErrorCode_BadFileFormat, "Empty DICOM instance"); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1524 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1525 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1526 NumpyVisitor visitor(depth, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1527 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1528 for (unsigned int frame = 0; frame < depth; frame++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1529 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1530 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1531 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1532 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1533 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1534 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1535 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1536 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1537 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1538 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1539 static void GetNumpySeries(RestApiGetCall& call) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1540 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1541 if (call.IsDocumentation()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1542 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1543 DocumentSharedNumpy(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1544 call.GetDocumentation() |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1545 .SetTag("Series") |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1546 .SetSummary("Decode series for numpy") |
|
4836
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1547 .SetDescription("Decode the given DICOM series, for use with numpy in Python. " |
|
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1548 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1549 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1550 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1551 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1552 const std::string seriesId = call.GetUriComponent("id", ""); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1553 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1554 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1555 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1556 Semaphore::Locker throttling(throttlingSemaphore_); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1557 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1558 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1559 SliceOrdering ordering(index, seriesId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1560 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1561 unsigned int depth = 0; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1562 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1563 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1564 depth += ordering.GetFramesCount(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1565 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1566 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1567 ServerContext& context = OrthancRestApi::GetContext(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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4831
diff
changeset
|
1568 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1569 NumpyVisitor visitor(depth, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1570 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1571 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1572 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1573 const std::string& instanceId = ordering.GetInstanceId(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1574 unsigned int framesCount = ordering.GetFramesCount(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1575 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1576 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1577 ServerContext::DicomCacheLocker locker(context, instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1578 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1579 for (unsigned int frame = 0; frame < framesCount; frame++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1580 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1581 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1582 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1583 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1584 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1585 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1586 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1587 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1588 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1589 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1590 |
| 974 | 1591 static void GetMatlabImage(RestApiGetCall& call) |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1592 { |
| 4414 | 1593 if (call.IsDocumentation()) |
| 1594 { | |
| 1595 std::string description; | |
| 1596 | |
| 1597 if (call.HasUriComponent("frame")) | |
| 1598 { | |
| 1599 description = "Decode one frame of interest from the given DICOM instance"; | |
| 1600 call.GetDocumentation() | |
| 1601 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
| 1602 } | |
| 1603 else | |
| 1604 { | |
| 1605 description = "Decode the first frame of the given DICOM instance."; | |
| 1606 } | |
| 1607 | |
| 1608 call.GetDocumentation() | |
| 1609 .SetTag("Instances") | |
| 1610 .SetSummary("Decode frame for Matlab") | |
| 1611 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
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5427
diff
changeset
|
1612 "https://orthanc.uclouvain.be/book/faq/matlab.html") |
| 4414 | 1613 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
| 1614 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
| 1615 return; | |
| 1616 } | |
| 1617 | |
|
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3816
diff
changeset
|
1618 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3816
diff
changeset
|
1619 |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1620 ServerContext& context = OrthancRestApi::GetContext(call); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1621 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1622 std::string frameId = call.GetUriComponent("frame", "0"); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1623 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1624 unsigned int frame; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1625 try |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1626 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1627 frame = boost::lexical_cast<unsigned int>(frameId); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1628 } |
|
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2804
diff
changeset
|
1629 catch (boost::bad_lexical_cast&) |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1630 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1631 return; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1632 } |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1633 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1634 std::string publicId = call.GetUriComponent("id", ""); |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1635 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1636 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1637 if (decoded.get() == NULL) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1638 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1639 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1640 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1641 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1642 else |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1643 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1644 std::string result; |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1645 decoded->ToMatlabString(result); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1646 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
1647 } |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1648 } |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1649 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1650 |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1651 template <bool GzipCompression> |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1652 static void GetRawFrame(RestApiGetCall& call) |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1653 { |
| 4408 | 1654 if (call.IsDocumentation()) |
| 1655 { | |
| 1656 call.GetDocumentation() | |
| 1657 .SetTag("Instances") | |
| 1658 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
| 1659 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
| 1660 "bypassing image decoding. This is notably useful to access the source files " | |
| 1661 "in compressed transfer syntaxes." + | |
| 1662 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
1663 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
| 4408 | 1664 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
| 1665 | |
| 1666 if (GzipCompression) | |
| 1667 { | |
| 1668 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
| 1669 } | |
| 1670 else | |
| 1671 { | |
| 1672 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
| 1673 } | |
| 1674 return; | |
| 1675 } | |
| 1676 | |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1677 std::string frameId = call.GetUriComponent("frame", "0"); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1678 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1679 unsigned int frame; |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1680 try |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1681 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1682 frame = boost::lexical_cast<unsigned int>(frameId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1683 } |
|
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2804
diff
changeset
|
1684 catch (boost::bad_lexical_cast&) |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1685 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1686 return; |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1687 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1688 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1689 std::string publicId = call.GetUriComponent("id", ""); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
1690 std::string raw; |
|
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
1691 MimeType mime; |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1692 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1693 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1694 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1695 locker.GetDicom().GetRawFrame(raw, mime, frame); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1696 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1697 |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1698 if (GzipCompression) |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1699 { |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1700 GzipCompressor gzip; |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1701 std::string compressed; |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1702 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
1703 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1704 } |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1705 else |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1706 { |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1707 call.GetOutput().AnswerBuffer(raw, mime); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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1708 } |
|
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1709 } |
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1710 |
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1711 |
| 974 | 1712 static void GetResourceStatistics(RestApiGetCall& call) |
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1713 { |
| 4418 | 1714 if (call.IsDocumentation()) |
| 1715 { | |
| 1716 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1717 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1718 call.GetDocumentation() | |
| 1719 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1720 .SetSummary("Get " + r + " statistics") | |
| 1721 .SetDescription("Get statistics about the given " + r) | |
| 1722 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1723 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
| 1724 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1725 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1726 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
| 1727 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1728 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1729 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1730 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
| 1731 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
| 1732 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
| 1733 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1734 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1735 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1736 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1737 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1738 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1739 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1740 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
| 1741 | |
| 1742 switch (t) | |
| 1743 { | |
| 1744 // Do NOT add "break" below this point! | |
| 1745 case ResourceType_Patient: | |
| 1746 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
| 1747 "Number of child studies within this " + r); | |
| 1748 | |
| 1749 case ResourceType_Study: | |
| 1750 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
| 1751 "Number of child series within this " + r); | |
| 1752 | |
| 1753 case ResourceType_Series: | |
| 1754 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
| 1755 "Number of child instances within this " + r); | |
| 1756 | |
| 1757 case ResourceType_Instance: | |
| 1758 default: | |
| 1759 break; | |
| 1760 } | |
| 1761 | |
| 1762 return; | |
| 1763 } | |
| 1764 | |
|
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1765 static const uint64_t MEGA_BYTES = 1024 * 1024; |
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1766 |
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1767 std::string publicId = call.GetUriComponent("id", ""); |
|
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1768 |
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1769 ResourceType type; |
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1770 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
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1771 unsigned int countStudies, countSeries, countInstances; |
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1772 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
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1773 type, diskSize, uncompressedSize, countStudies, countSeries, |
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1774 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
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1775 |
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1776 Json::Value result = Json::objectValue; |
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1777 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1778 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1779 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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1780 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
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1781 |
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1782 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
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1783 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1784 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
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1785 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
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1786 |
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1787 switch (type) |
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1788 { |
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1789 // Do NOT add "break" below this point! |
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1790 case ResourceType_Patient: |
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1791 result["CountStudies"] = countStudies; |
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1792 |
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1793 case ResourceType_Study: |
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1794 result["CountSeries"] = countSeries; |
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1795 |
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1796 case ResourceType_Series: |
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1797 result["CountInstances"] = countInstances; |
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1798 |
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1799 case ResourceType_Instance: |
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1800 default: |
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1801 break; |
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1802 } |
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1803 |
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1804 call.GetOutput().AnswerJson(result); |
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1805 } |
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1806 |
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1807 |
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1808 |
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1809 // Handling of metadata ----------------------------------------------------- |
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1810 |
| 4205 | 1811 static void CheckValidResourceType(const RestApiCall& call) |
|
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1812 { |
|
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|
1813 assert(!call.GetFullUri().empty()); |
| 4409 | 1814 const std::string resourceType = call.GetFullUri() [0]; |
|
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1815 StringToResourceType(resourceType.c_str()); |
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1816 } |
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1817 |
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1818 |
| 974 | 1819 static void ListMetadata(RestApiGetCall& call) |
|
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1820 { |
| 4414 | 1821 if (call.IsDocumentation()) |
| 1822 { | |
| 1823 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1824 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1825 call.GetDocumentation() | |
| 1826 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1827 .SetSummary("List metadata") | |
| 1828 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
| 1829 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1830 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
| 1831 "If present, also retrieve the value of the individual metadata", false) | |
|
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1832 .SetHttpGetArgument("numeric", RestApiCallDocumentation::Type_String, |
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1833 "If present, use the numeric identifier of the metadata instead of its symbolic name", false) |
| 4414 | 1834 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " |
| 1835 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
| 1836 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
| 1837 return; | |
| 1838 } | |
| 1839 | |
|
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1840 assert(!call.GetFullUri().empty()); |
| 4554 | 1841 const std::string publicId = call.GetUriComponent("id", ""); |
| 1842 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
|
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1843 |
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1844 typedef std::map<MetadataType, std::string> Metadata; |
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1845 |
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1846 Metadata metadata; |
| 4554 | 1847 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
|
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1848 |
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1849 Json::Value result; |
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1850 |
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1851 bool isNumeric = call.HasArgument("numeric"); |
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1852 |
|
5405
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1853 if (call.HasArgument("expand") && call.GetBooleanArgument("expand", true)) |
|
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1854 { |
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1855 result = Json::objectValue; |
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1856 |
|
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1857 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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1858 { |
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1859 std::string key; |
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1860 if (isNumeric) |
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1861 { |
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1862 key = boost::lexical_cast<std::string>(it->first); |
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1863 } |
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1864 else |
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1865 { |
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1866 key = EnumerationToString(it->first); |
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1867 } |
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1868 |
|
3187
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1869 result[key] = it->second; |
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1870 } |
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1871 } |
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1872 else |
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1873 { |
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1874 result = Json::arrayValue; |
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1875 |
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1876 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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1877 { |
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1878 if (isNumeric) |
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1879 { |
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1880 result.append(it->first); |
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1881 } |
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1882 else |
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1883 { |
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1884 result.append(EnumerationToString(it->first)); |
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1885 } |
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1886 } |
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1887 } |
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1888 |
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1889 call.GetOutput().AnswerJson(result); |
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1890 } |
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1891 |
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1892 |
| 4657 | 1893 static void SetStringContentETag(const RestApiOutput& output, |
| 1894 int64_t revision, | |
| 1895 const std::string& value) | |
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1896 { |
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1897 std::string md5; |
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1898 Toolbox::ComputeMD5(md5, value); |
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1899 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1900 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1901 } |
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1902 |
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1903 |
| 4657 | 1904 static void SetBufferContentETag(const RestApiOutput& output, |
|
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1905 int64_t revision, |
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1906 const void* data, |
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1907 size_t size) |
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1908 { |
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1909 std::string md5; |
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1910 Toolbox::ComputeMD5(md5, data, size); |
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1911 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1912 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1913 } |
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1914 |
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1915 |
| 4657 | 1916 static void SetAttachmentETag(const RestApiOutput& output, |
|
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1917 int64_t revision, |
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1918 const FileInfo& info) |
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1919 { |
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1920 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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1921 info.GetUncompressedMD5() + "\""); |
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1922 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1923 } |
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1924 |
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1925 |
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1926 static std::string GetMD5(const std::string& value) |
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1927 { |
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1928 std::string md5; |
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1929 Toolbox::ComputeMD5(md5, value); |
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1930 return md5; |
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1931 } |
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1932 |
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1933 |
|
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1934 static bool GetRevisionHeader(int64_t& revision /* out */, |
|
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1935 std::string& md5 /* out */, |
|
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1936 const RestApiCall& call, |
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1937 const std::string& header) |
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1938 { |
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1939 std::string lower; |
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1940 Toolbox::ToLowerCase(lower, header); |
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1941 |
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1942 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1943 if (found == call.GetHttpHeaders().end()) |
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1944 { |
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1945 return false; |
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1946 } |
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1947 else |
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1948 { |
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1949 std::string value = Toolbox::StripSpaces(found->second); |
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1950 Toolbox::RemoveSurroundingQuotes(value); |
|
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1951 |
|
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1952 try |
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1953 { |
|
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1954 size_t comma = value.find('-'); |
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1955 if (comma != std::string::npos) |
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1956 { |
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1957 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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1958 md5 = value.substr(comma + 1); |
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1959 return true; |
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1960 } |
|
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1961 } |
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1962 catch (boost::bad_lexical_cast&) |
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1963 { |
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1964 } |
|
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1965 |
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1966 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1967 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
|
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1968 } |
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1969 } |
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|
1970 |
|
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|
1971 |
| 974 | 1972 static void GetMetadata(RestApiGetCall& call) |
|
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|
1973 { |
| 4414 | 1974 if (call.IsDocumentation()) |
| 1975 { | |
| 1976 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1977 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1978 call.GetDocumentation() | |
| 1979 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1980 .SetSummary("Get metadata") | |
| 1981 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
| 1982 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1983 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
|
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|
1984 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
|
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1985 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
|
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|
1986 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4414 | 1987 return; |
| 1988 } | |
| 1989 | |
|
4460
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1990 assert(!call.GetFullUri().empty()); |
|
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1991 const std::string publicId = call.GetUriComponent("id", ""); |
|
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1992 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
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New metadata automatically computed at the series level: "RemoteAET"
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|
1993 |
|
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|
1994 std::string name = call.GetUriComponent("name", ""); |
|
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|
1995 MetadataType metadata = StringToMetadata(name); |
|
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|
1996 |
|
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|
1997 std::string value; |
|
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|
1998 int64_t revision; |
|
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|
1999 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
|
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|
2000 { |
|
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|
2001 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
|
4623
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|
2002 |
|
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|
2003 int64_t userRevision; |
|
4640
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|
2004 std::string userMD5; |
|
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|
2005 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
66109d24d26e
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|
2006 userRevision == revision && |
|
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|
2007 userMD5 == GetMD5(value)) |
|
4623
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|
2008 { |
|
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|
2009 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
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parents:
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diff
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|
2010 } |
|
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|
2011 else |
|
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|
2012 { |
|
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|
2013 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
|
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|
2014 } |
|
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|
2015 } |
|
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|
2016 } |
|
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|
2017 |
|
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|
2018 |
| 974 | 2019 static void DeleteMetadata(RestApiDeleteCall& call) |
|
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|
2020 { |
| 4414 | 2021 if (call.IsDocumentation()) |
| 2022 { | |
| 2023 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2024 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2025 call.GetDocumentation() | |
| 2026 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2027 .SetSummary("Delete metadata") | |
| 2028 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
| 2029 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
| 2030 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
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|
2031 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
|
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|
2032 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2033 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4414 | 2034 return; |
| 2035 } | |
| 2036 | |
|
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|
2037 CheckValidResourceType(call); |
|
4623
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|
2038 const std::string publicId = call.GetUriComponent("id", ""); |
|
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|
2039 |
|
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|
2040 std::string name = call.GetUriComponent("name", ""); |
|
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|
2041 MetadataType metadata = StringToMetadata(name); |
|
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diff
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|
2042 |
|
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2043 if (IsUserMetadata(metadata) || // It is forbidden to delete internal metadata... |
|
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2044 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
|
4623
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|
2045 { |
|
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changeset
|
2046 bool found; |
|
95ffe3b6ef7c
handling of revisions for metadata
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parents:
4589
diff
changeset
|
2047 int64_t revision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2048 std::string md5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2049 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
4623
95ffe3b6ef7c
handling of revisions for metadata
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parents:
4589
diff
changeset
|
2050 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2051 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
|
4623
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|
2052 } |
|
95ffe3b6ef7c
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parents:
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diff
changeset
|
2053 else |
|
95ffe3b6ef7c
handling of revisions for metadata
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parents:
4589
diff
changeset
|
2054 { |
|
95ffe3b6ef7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2055 OrthancConfiguration::ReaderLock lock; |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2056 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2057 { |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2058 throw OrthancException(ErrorCode_Revision, |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2059 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
4623
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diff
changeset
|
2060 } |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2061 else |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2062 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2063 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
|
4623
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4589
diff
changeset
|
2064 } |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2065 } |
|
95ffe3b6ef7c
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parents:
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diff
changeset
|
2066 |
|
95ffe3b6ef7c
handling of revisions for metadata
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diff
changeset
|
2067 if (found) |
|
95ffe3b6ef7c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2068 { |
|
95ffe3b6ef7c
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parents:
4589
diff
changeset
|
2069 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
95ffe3b6ef7c
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parents:
4589
diff
changeset
|
2070 } |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2071 else |
|
95ffe3b6ef7c
handling of revisions for metadata
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parents:
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diff
changeset
|
2072 { |
|
95ffe3b6ef7c
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diff
changeset
|
2073 throw OrthancException(ErrorCode_UnknownResource); |
|
95ffe3b6ef7c
handling of revisions for metadata
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changeset
|
2074 } |
|
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
2075 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2076 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2077 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2078 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2079 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
2080 } |
|
5197fd35333c
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parents:
diff
changeset
|
2081 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2082 |
| 974 | 2083 static void SetMetadata(RestApiPutCall& call) |
|
751
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changeset
|
2084 { |
| 4414 | 2085 if (call.IsDocumentation()) |
| 2086 { | |
| 2087 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2088 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2089 call.GetDocumentation() | |
| 2090 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2091 .SetSummary("Set metadata") | |
| 2092 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
| 2093 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
| 2094 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 2095 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
|
4623
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4589
diff
changeset
|
2096 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
|
95ffe3b6ef7c
handling of revisions for metadata
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parents:
4589
diff
changeset
|
2097 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
| 4414 | 2098 return; |
| 2099 } | |
| 2100 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
2101 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
2102 |
|
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
2103 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
2104 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2105 MetadataType metadata = StringToMetadata(name); |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
2106 |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
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parents:
1437
diff
changeset
|
2107 std::string value; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
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1437
diff
changeset
|
2108 call.BodyToString(value); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2109 |
|
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
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parents:
5432
diff
changeset
|
2110 if (IsUserMetadata(metadata) || // It is forbidden to modify internal metadata... |
|
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2111 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2112 { |
|
4623
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diff
changeset
|
2113 int64_t oldRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2114 std::string oldMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
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|
2115 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
4623
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diff
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|
2116 |
|
95ffe3b6ef7c
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4589
diff
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|
2117 if (!hasOldRevision) |
|
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4589
diff
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|
2118 { |
|
95ffe3b6ef7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
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|
2119 OrthancConfiguration::ReaderLock lock; |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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4589
diff
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|
2120 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2121 { |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2122 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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4589
diff
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|
2123 // the actual value of "oldRevision" if the metadata is |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2124 // inexistent as expected |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2125 hasOldRevision = true; |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2126 oldRevision = -1; // dummy value |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2127 oldMD5.clear(); // dummy value |
|
4623
95ffe3b6ef7c
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Sebastien Jodogne <s.jodogne@gmail.com>
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4589
diff
changeset
|
2128 } |
|
95ffe3b6ef7c
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Sebastien Jodogne <s.jodogne@gmail.com>
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4589
diff
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|
2129 } |
|
95ffe3b6ef7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2130 |
|
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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4589
diff
changeset
|
2131 int64_t newRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2132 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2133 hasOldRevision, oldRevision, oldMD5); |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2134 |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2135 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2136 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2137 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2138 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2139 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2140 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
changeset
|
2141 } |
|
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2142 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2143 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2144 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2145 |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2146 // Handling of labels ------------------------------------------------------- |
|
d0f7c742d397
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|
2147 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2148 static void ListLabels(RestApiGetCall& call) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2149 { |
|
d0f7c742d397
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5200
diff
changeset
|
2150 if (call.IsDocumentation()) |
|
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2151 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2152 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
2153 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
2154 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2155 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
5275
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
2156 .SetSummary("List labels") |
|
8686476e9d12
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
2157 .SetDescription("Get the labels that are associated with the given " + r + " (new in Orthanc 1.12.0)") |
|
5221
d0f7c742d397
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|
2158 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2159 .AddAnswerType(MimeType_Json, "JSON array containing the names of the labels") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2160 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/labels", true); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
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|
2161 return; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
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|
2162 } |
|
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2163 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2164 assert(!call.GetFullUri().empty()); |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
2165 const std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2166 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2167 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2168 std::set<std::string> labels; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2169 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2170 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2171 Json::Value result = Json::arrayValue; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2172 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2173 for (std::set<std::string>::const_iterator it = labels.begin(); it != labels.end(); ++it) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2174 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2175 result.append(*it); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2176 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2177 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2178 call.GetOutput().AnswerJson(result); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2179 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2180 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2181 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2182 static void GetLabel(RestApiGetCall& call) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2183 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2184 if (call.IsDocumentation()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2185 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2186 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2187 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2188 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2189 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2190 .SetSummary("Test label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2191 .SetDescription("Test whether the " + r + " is associated with the given label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2192 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
2193 .SetUriArgument("label", "The label of interest") |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2194 .AddAnswerType(MimeType_PlainText, "Empty string is returned in the case of presence, error 404 in the case of absence"); |
|
d0f7c742d397
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diff
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|
2195 return; |
|
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diff
changeset
|
2196 } |
|
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changeset
|
2197 |
|
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diff
changeset
|
2198 CheckValidResourceType(call); |
|
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diff
changeset
|
2199 |
|
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|
2200 assert(!call.GetFullUri().empty()); |
|
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diff
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|
2201 const std::string publicId = call.GetUriComponent("id", ""); |
|
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|
2202 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
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|
2203 |
|
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|
2204 std::string label = call.GetUriComponent("label", ""); |
|
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|
2205 |
|
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changeset
|
2206 std::set<std::string> labels; |
|
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|
2207 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
|
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|
2208 |
|
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changeset
|
2209 if (labels.find(label) != labels.end()) |
|
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|
2210 { |
|
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diff
changeset
|
2211 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
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|
2212 } |
|
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changeset
|
2213 } |
|
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|
2214 |
|
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changeset
|
2215 |
|
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changeset
|
2216 static void AddLabel(RestApiPutCall& call) |
|
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|
2217 { |
|
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changeset
|
2218 if (call.IsDocumentation()) |
|
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diff
changeset
|
2219 { |
|
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changeset
|
2220 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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changeset
|
2221 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
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|
2222 call.GetDocumentation() |
|
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changeset
|
2223 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2224 .SetSummary("Add label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2225 .SetDescription("Associate a label with a " + r) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2226 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2227 .SetUriArgument("label", "The label to be added"); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2228 return; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2229 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2230 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2231 CheckValidResourceType(call); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2232 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2233 std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2234 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2235 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2236 std::string label = call.GetUriComponent("label", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2237 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Add); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2238 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2239 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2240 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2241 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2242 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2243 static void RemoveLabel(RestApiDeleteCall& call) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2244 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2245 if (call.IsDocumentation()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2246 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2247 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2248 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2249 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2250 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2251 .SetSummary("Remove label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2252 .SetDescription("Remove a label associated with a " + r) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2253 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2254 .SetUriArgument("label", "The label to be removed"); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2255 return; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2256 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2257 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2258 CheckValidResourceType(call); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2259 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2260 std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2261 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2262 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2263 std::string label = call.GetUriComponent("label", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2264 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Remove); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2265 |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
2266 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2267 } |
|
d0f7c742d397
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diff
changeset
|
2268 |
|
751
5197fd35333c
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diff
changeset
|
2269 |
|
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diff
changeset
|
2270 // Handling of attached files ----------------------------------------------- |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2271 |
| 974 | 2272 static void ListAttachments(RestApiGetCall& call) |
|
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diff
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|
2273 { |
| 4409 | 2274 if (call.IsDocumentation()) |
| 2275 { | |
| 2276 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2277 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2278 call.GetDocumentation() | |
| 2279 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2280 .SetSummary("List attachments") | |
| 2281 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
| 2282 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
4853
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2283 .SetHttpGetArgument("full", RestApiCallDocumentation::Type_String, |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2284 "If present, retrieve the attachments list and their numerical ids", false) |
| 4409 | 2285 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") |
| 2286 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
| 2287 return; | |
| 2288 } | |
| 2289 | |
| 2290 const std::string resourceType = call.GetFullUri() [0]; | |
| 2291 const std::string publicId = call.GetUriComponent("id", ""); | |
|
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4513
diff
changeset
|
2292 std::set<FileContentType> attachments; |
|
751
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diff
changeset
|
2293 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2294 |
|
4853
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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4836
diff
changeset
|
2295 Json::Value result; |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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4836
diff
changeset
|
2296 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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4836
diff
changeset
|
2297 if (call.HasArgument("full")) |
|
751
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changeset
|
2298 { |
|
4853
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diff
changeset
|
2299 result = Json::objectValue; |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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4836
diff
changeset
|
2300 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2301 for (std::set<FileContentType>::const_iterator |
|
b3d0a3a4d890
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Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2302 it = attachments.begin(); it != attachments.end(); ++it) |
|
b3d0a3a4d890
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diff
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|
2303 { |
|
b3d0a3a4d890
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diff
changeset
|
2304 std::string key = EnumerationToString(*it); |
|
b3d0a3a4d890
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4836
diff
changeset
|
2305 result[key] = static_cast<uint16_t>(*it); |
|
b3d0a3a4d890
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diff
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|
2306 } |
|
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|
2307 } |
|
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|
2308 else |
|
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changeset
|
2309 { |
|
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|
2310 result = Json::arrayValue; |
|
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|
2311 |
|
b3d0a3a4d890
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|
2312 for (std::set<FileContentType>::const_iterator |
|
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|
2313 it = attachments.begin(); it != attachments.end(); ++it) |
|
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|
2314 { |
|
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changeset
|
2315 result.append(EnumerationToString(*it)); |
|
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|
2316 } |
|
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|
2317 } |
|
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|
2318 |
|
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changeset
|
2319 call.GetOutput().AnswerJson(result); |
|
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|
2320 } |
|
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changeset
|
2321 |
|
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changeset
|
2322 |
|
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|
2323 static void AddAttachmentDocumentation(RestApiGetCall& call, |
|
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|
2324 const std::string& resourceType) |
|
f7d5372b59b3
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|
2325 { |
|
f7d5372b59b3
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|
2326 call.GetDocumentation() |
|
f7d5372b59b3
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4623
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|
2327 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
|
f7d5372b59b3
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4623
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changeset
|
2328 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
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4623
diff
changeset
|
2329 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
f7d5372b59b3
handling revisions of attachments
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4623
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changeset
|
2330 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
|
f7d5372b59b3
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|
2331 } |
|
f7d5372b59b3
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changeset
|
2332 |
|
f7d5372b59b3
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changeset
|
2333 |
|
f7d5372b59b3
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4623
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changeset
|
2334 static bool GetAttachmentInfo(FileInfo& info, |
|
f7d5372b59b3
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4623
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changeset
|
2335 RestApiGetCall& call) |
|
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|
2336 { |
|
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changeset
|
2337 CheckValidResourceType(call); |
|
5197fd35333c
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changeset
|
2338 |
|
4627
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4623
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changeset
|
2339 const std::string publicId = call.GetUriComponent("id", ""); |
|
f7d5372b59b3
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4623
diff
changeset
|
2340 const std::string name = call.GetUriComponent("name", ""); |
|
751
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changeset
|
2341 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
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changeset
|
2342 |
|
4627
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4623
diff
changeset
|
2343 int64_t revision; |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2344 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2345 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2346 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
|
4627
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handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2347 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2348 int64_t userRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2349 std::string userMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2350 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2351 revision == userRevision && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2352 info.GetUncompressedMD5() == userMD5) |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2353 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2354 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2355 return false; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2356 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2357 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2358 { |
|
f7d5372b59b3
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parents:
4623
diff
changeset
|
2359 return true; |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2360 } |
|
f7d5372b59b3
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4623
diff
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|
2361 } |
|
f7d5372b59b3
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parents:
4623
diff
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|
2362 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2363 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2364 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2365 } |
|
751
5197fd35333c
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diff
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|
2366 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2367 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2368 |
| 974 | 2369 static void GetAttachmentOperations(RestApiGetCall& call) |
|
751
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2370 { |
| 4409 | 2371 if (call.IsDocumentation()) |
| 2372 { | |
| 2373 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2374 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2375 AddAttachmentDocumentation(call, r); |
| 4409 | 2376 call.GetDocumentation() |
| 2377 .SetTag("Other") | |
| 4414 | 2378 .SetSummary("List operations on attachments") |
| 2379 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
| 4409 | 2380 .AddAnswerType(MimeType_Json, "List of the available operations") |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
2381 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/6582b1c0-292ad5ab-ba0f088f-f7a1766f-9a29a54f/attachments/dicom", true); |
| 4409 | 2382 return; |
| 2383 } | |
| 2384 | |
|
751
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diff
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|
2385 FileInfo info; |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2386 if (GetAttachmentInfo(info, call)) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2387 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2388 Json::Value operations = Json::arrayValue; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2389 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2390 operations.append("compress"); |
|
751
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diff
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|
2391 operations.append("compressed-data"); |
|
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diff
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|
2392 |
|
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diff
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|
2393 if (info.GetCompressedMD5() != "") |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2394 { |
|
5197fd35333c
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diff
changeset
|
2395 operations.append("compressed-md5"); |
|
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|
2396 } |
|
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|
2397 |
|
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|
2398 operations.append("compressed-size"); |
|
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parents:
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|
2399 operations.append("data"); |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2400 operations.append("info"); |
|
1700
f5ddbd9239dd
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Sebastien Jodogne <s.jodogne@gmail.com>
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1556
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changeset
|
2401 operations.append("is-compressed"); |
|
751
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|
2402 |
|
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diff
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|
2403 if (info.GetUncompressedMD5() != "") |
|
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|
2404 { |
|
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diff
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|
2405 operations.append("md5"); |
|
5197fd35333c
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diff
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|
2406 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2407 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2408 operations.append("size"); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2409 operations.append("uncompress"); |
|
751
5197fd35333c
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diff
changeset
|
2410 |
|
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parents:
diff
changeset
|
2411 if (info.GetCompressedMD5() != "" && |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2412 info.GetUncompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2413 { |
|
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diff
changeset
|
2414 operations.append("verify-md5"); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2415 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2416 |
|
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diff
changeset
|
2417 call.GetOutput().AnswerJson(operations); |
|
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diff
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|
2418 } |
|
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parents:
diff
changeset
|
2419 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2420 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2421 |
|
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|
2422 template <int uncompress> |
| 974 | 2423 static void GetAttachmentData(RestApiGetCall& call) |
|
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diff
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|
2424 { |
| 4409 | 2425 if (call.IsDocumentation()) |
| 2426 { | |
| 2427 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2428 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2429 call.GetDocumentation() | |
| 2430 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2431 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
| 2432 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
| 4418 | 2433 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
| 4409 | 2434 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 2435 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
4627
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4623
diff
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|
2436 .AddAnswerType(MimeType_Binary, "The attachment") |
|
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|
2437 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
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changeset
|
2438 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4409 | 2439 return; |
| 2440 } | |
| 2441 | |
|
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|
2442 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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changeset
|
2443 |
|
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|
2444 CheckValidResourceType(call); |
|
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|
2445 |
|
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diff
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|
2446 std::string publicId = call.GetUriComponent("id", ""); |
|
1146
200fcac0deb4
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Sebastien Jodogne <s.jodogne@gmail.com>
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1145
diff
changeset
|
2447 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
|
751
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|
2448 |
|
4640
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changeset
|
2449 FileInfo info; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
2450 if (GetAttachmentInfo(info, call)) |
|
1146
200fcac0deb4
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1145
diff
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|
2451 { |
|
4640
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diff
changeset
|
2452 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
|
66109d24d26e
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changeset
|
2453 |
|
66109d24d26e
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diff
changeset
|
2454 if (uncompress) |
|
4627
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|
2455 { |
|
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changeset
|
2456 context.AnswerAttachment(call.GetOutput(), publicId, type); |
|
f7d5372b59b3
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|
2457 } |
|
f7d5372b59b3
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changeset
|
2458 else |
|
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diff
changeset
|
2459 { |
|
4640
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changeset
|
2460 // Return the raw data (possibly compressed), as stored on the filesystem |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
2461 std::string content; |
| 5427 | 2462 std::string attachmentId; |
|
4640
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4627
diff
changeset
|
2463 int64_t revision; |
| 5427 | 2464 context.ReadAttachment(content, revision, attachmentId, publicId, type, false, true /* skipCache when you absolutely need the compressed data */); |
|
4640
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diff
changeset
|
2465 |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2466 int64_t userRevision; |
|
66109d24d26e
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diff
changeset
|
2467 std::string userMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
2468 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2469 revision == userRevision && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2470 info.GetUncompressedMD5() == userMD5) |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
2471 { |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2472 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
66109d24d26e
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changeset
|
2473 } |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
2474 else |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
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changeset
|
2475 { |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2476 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2477 } |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2478 } |
|
1146
200fcac0deb4
optimization for access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1145
diff
changeset
|
2479 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2480 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2481 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2482 |
| 974 | 2483 static void GetAttachmentSize(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2484 { |
| 4409 | 2485 if (call.IsDocumentation()) |
| 2486 { | |
| 2487 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2488 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2489 AddAttachmentDocumentation(call, r); |
| 4409 | 2490 call.GetDocumentation() |
| 2491 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2492 .SetSummary("Get size of attachment") | |
| 2493 .SetDescription("Get the size of one attachment associated with the given " + r) | |
| 2494 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
| 2495 return; | |
| 2496 } | |
| 2497 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2498 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2499 if (GetAttachmentInfo(info, call)) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2500 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2501 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2502 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2503 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2504 |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2505 static void GetAttachmentInfo(RestApiGetCall& call) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2506 { |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2507 if (call.IsDocumentation()) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2508 { |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2509 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2510 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2511 AddAttachmentDocumentation(call, r); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2512 call.GetDocumentation() |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2513 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2514 .SetSummary("Get info about the attachment") |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2515 .SetDescription("Get all the information about the attachment associated with the given " + r) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2516 .AddAnswerType(MimeType_Json, "JSON object containing the information about the attachment") |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
2517 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/attachments/dicom/info", true); |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2518 return; |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2519 } |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2520 |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2521 FileInfo info; |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2522 if (GetAttachmentInfo(info, call)) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2523 { |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2524 Json::Value result = Json::objectValue; |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2525 result["Uuid"] = info.GetUuid(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2526 result["ContentType"] = info.GetContentType(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2527 result["UncompressedSize"] = Json::Value::UInt64(info.GetUncompressedSize()); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2528 result["CompressedSize"] = Json::Value::UInt64(info.GetCompressedSize()); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2529 result["UncompressedMD5"] = info.GetUncompressedMD5(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2530 result["CompressedMD5"] = info.GetCompressedMD5(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2531 |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2532 call.GetOutput().AnswerJson(result); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2533 } |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2534 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2535 |
| 974 | 2536 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2537 { |
| 4409 | 2538 if (call.IsDocumentation()) |
| 2539 { | |
| 2540 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2541 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2542 AddAttachmentDocumentation(call, r); |
| 4409 | 2543 call.GetDocumentation() |
| 2544 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 4410 | 2545 .SetSummary("Get size of attachment on disk") |
| 4409 | 2546 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
| 4413 | 2547 "This is different from `.../size` iff `EnableStorage` is `true`.") |
| 4410 | 2548 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
| 4409 | 2549 return; |
| 2550 } | |
| 2551 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2552 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2553 if (GetAttachmentInfo(info, call)) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2554 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2555 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2556 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2557 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2558 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2559 |
| 974 | 2560 static void GetAttachmentMD5(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2561 { |
| 4410 | 2562 if (call.IsDocumentation()) |
| 2563 { | |
| 2564 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2565 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2566 AddAttachmentDocumentation(call, r); |
| 4410 | 2567 call.GetDocumentation() |
| 2568 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2569 .SetSummary("Get MD5 of attachment") | |
| 2570 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
| 2571 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
| 2572 return; | |
| 2573 } | |
| 2574 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2575 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2576 if (GetAttachmentInfo(info, call) && |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2577 info.GetUncompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2578 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2579 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2580 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2581 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2582 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2583 |
| 974 | 2584 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2585 { |
| 4410 | 2586 if (call.IsDocumentation()) |
| 2587 { | |
| 2588 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2589 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2590 AddAttachmentDocumentation(call, r); |
| 4410 | 2591 call.GetDocumentation() |
| 2592 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2593 .SetSummary("Get MD5 of attachment on disk") | |
| 2594 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
| 4413 | 2595 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
| 4410 | 2596 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
| 2597 return; | |
| 2598 } | |
| 2599 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2600 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2601 if (GetAttachmentInfo(info, call) && |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2602 info.GetCompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2603 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2604 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2605 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2606 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2607 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2608 |
| 974 | 2609 static void VerifyAttachment(RestApiPostCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2610 { |
| 4410 | 2611 if (call.IsDocumentation()) |
| 2612 { | |
| 2613 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2614 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2615 call.GetDocumentation() | |
| 2616 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2617 .SetSummary("Verify attachment") | |
| 2618 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
| 2619 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2620 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 2621 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
| 2622 return; | |
| 2623 } | |
| 2624 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2625 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2626 CheckValidResourceType(call); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2627 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2628 std::string publicId = call.GetUriComponent("id", ""); |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2629 std::string name = call.GetUriComponent("name", ""); |
|
4627
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handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2630 FileContentType contentType = StringToContentType(name); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2631 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2632 FileInfo info; |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2633 int64_t revision; // Ignored |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2634 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2635 info.GetCompressedMD5() == "" || |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2636 info.GetUncompressedMD5() == "") |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2637 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2638 // Inexistent resource, or no MD5 available |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2639 return; |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2640 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2641 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2642 bool ok = false; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2643 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2644 // First check whether the compressed data is correctly stored in the disk |
|
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parents:
diff
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|
2645 std::string data; |
| 5427 | 2646 std::string attachmentId; |
| 2647 | |
| 2648 context.ReadAttachment(data, revision, attachmentId, publicId, StringToContentType(name), false, true /* skipCache when you absolutely need the compressed data */); | |
|
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|
2649 |
|
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|
2650 std::string actualMD5; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2651 Toolbox::ComputeMD5(actualMD5, data); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2652 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2653 if (actualMD5 == info.GetCompressedMD5()) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2654 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2655 // The compressed data is OK. If a compression algorithm was |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2656 // applied to it, now check the MD5 of the uncompressed data. |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2657 if (info.GetCompressionType() == CompressionType_None) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2658 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2659 ok = true; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2660 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2661 else |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2662 { |
| 5427 | 2663 context.ReadAttachment(data, revision, attachmentId, publicId, StringToContentType(name), true, true /* skipCache when you absolutely need the compressed data */); |
|
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parents:
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|
2664 Toolbox::ComputeMD5(actualMD5, data); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2665 ok = (actualMD5 == info.GetUncompressedMD5()); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2666 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2667 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2668 |
|
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|
2669 if (ok) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2670 { |
|
4294
0923247e69f6
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Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2671 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
|
2908
9d277f8ad698
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Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
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|
2672 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2673 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2674 else |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2675 { |
|
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Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2676 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
|
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|
2677 } |
|
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parents:
diff
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|
2678 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2679 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2680 |
| 974 | 2681 static void UploadAttachment(RestApiPutCall& call) |
|
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|
2682 { |
| 4414 | 2683 if (call.IsDocumentation()) |
| 2684 { | |
| 2685 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2686 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2687 call.GetDocumentation() | |
| 2688 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2689 .SetSummary("Set attachment") | |
| 2690 .SetDescription("Attach a file to the given DICOM " + r + | |
| 2691 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
| 2692 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 2693 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
| 2694 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
|
4627
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2695 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
|
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4623
diff
changeset
|
2696 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
| 4414 | 2697 return; |
| 2698 } | |
| 2699 | |
|
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|
2700 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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|
2701 CheckValidResourceType(call); |
|
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|
2702 |
|
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|
2703 std::string publicId = call.GetUriComponent("id", ""); |
|
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|
2704 std::string name = call.GetUriComponent("name", ""); |
|
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|
2705 |
|
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parents:
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|
2706 FileContentType contentType = StringToContentType(name); |
|
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2707 if (IsUserContentType(contentType) || // It is forbidden to modify internal attachments... |
|
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
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|
2708 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
|
751
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|
2709 { |
|
4627
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4623
diff
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|
2710 int64_t oldRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
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|
2711 std::string oldMD5; |
|
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
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4627
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|
2712 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
4627
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|
2713 |
|
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|
2714 if (!hasOldRevision) |
|
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|
2715 { |
|
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4623
diff
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|
2716 OrthancConfiguration::ReaderLock lock; |
|
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4623
diff
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|
2717 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
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4623
diff
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|
2718 { |
|
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4623
diff
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|
2719 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2720 // the actual value of "oldRevision" if the metadata is |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2721 // inexistent as expected |
|
f7d5372b59b3
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|
2722 hasOldRevision = true; |
|
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4623
diff
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|
2723 oldRevision = -1; // dummy value |
|
4640
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4627
diff
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|
2724 oldMD5.clear(); // dummy value |
|
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|
2725 } |
|
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4623
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|
2726 } |
|
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|
2727 |
|
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|
2728 int64_t newRevision; |
|
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4623
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|
2729 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
|
4640
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4627
diff
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|
2730 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
|
66109d24d26e
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|
2731 |
|
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2732 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
|
2908
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2905
diff
changeset
|
2733 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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2734 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
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|
2735 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
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|
2736 { |
|
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
changeset
|
2737 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
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|
2738 } |
|
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|
2739 } |
|
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|
2740 |
|
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2741 |
| 974 | 2742 static void DeleteAttachment(RestApiDeleteCall& call) |
|
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|
2743 { |
| 4413 | 2744 if (call.IsDocumentation()) |
| 2745 { | |
| 2746 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2747 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2748 call.GetDocumentation() | |
| 2749 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2750 .SetSummary("Delete attachment") | |
| 4414 | 2751 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
| 2752 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
| 4413 | 2753 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4627
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4623
diff
changeset
|
2754 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2755 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2756 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4413 | 2757 return; |
| 2758 } | |
| 2759 | |
|
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changeset
|
2760 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2761 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2762 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2763 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2764 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2765 |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2766 bool allowed; |
|
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2767 if (IsUserContentType(contentType) || // It is forbidden to delete internal attachments... |
|
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2768 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2769 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2770 allowed = true; |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2771 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2772 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2773 { |
|
2940
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2774 OrthancConfiguration::ReaderLock lock; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2775 |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2776 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2777 contentType == FileContentType_DicomAsJson) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2778 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2779 allowed = true; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2780 } |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2781 else |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2782 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2783 // It is forbidden to delete internal attachments, except for |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2784 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2785 // would be automatically reconstructed on the next GET call) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2786 allowed = false; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2787 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2788 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2789 |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2790 if (allowed) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2791 { |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2792 bool found; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2793 int64_t revision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2794 std::string md5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2795 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2796 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2797 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2798 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2799 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2800 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2801 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2802 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2803 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2804 throw OrthancException(ErrorCode_Revision, |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2805 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2806 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2807 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2808 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2809 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2810 false, -1 /* dummy value */, "" /* dummy value */); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2811 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2812 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2813 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2814 if (found) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2815 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2816 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2817 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2818 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2819 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2820 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2821 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2822 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2823 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2824 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2825 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2826 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2827 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2828 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2829 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2830 template <enum CompressionType compression> |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2831 static void ChangeAttachmentCompression(RestApiPostCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2832 { |
| 4413 | 2833 if (call.IsDocumentation()) |
| 2834 { | |
| 2835 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2836 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2837 call.GetDocumentation() | |
| 2838 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2839 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
| 2840 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
| 2841 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2842 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
| 4413 | 2843 return; |
| 2844 } | |
| 2845 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2846 CheckValidResourceType(call); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2847 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2848 std::string publicId = call.GetUriComponent("id", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2849 std::string name = call.GetUriComponent("name", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2850 FileContentType contentType = StringToContentType(name); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2851 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2852 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2853 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2854 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2855 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2856 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2857 static void IsAttachmentCompressed(RestApiGetCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2858 { |
| 4413 | 2859 if (call.IsDocumentation()) |
| 2860 { | |
| 2861 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2862 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2863 AddAttachmentDocumentation(call, r); |
| 4413 | 2864 call.GetDocumentation() |
| 2865 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2866 .SetSummary("Is attachment compressed?") | |
| 2867 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
| 2868 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
| 2869 return; | |
| 2870 } | |
| 2871 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2872 FileInfo info; |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2873 if (GetAttachmentInfo(info, call)) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2874 { |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2875 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2876 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2877 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2878 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2879 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2880 |
| 782 | 2881 // Raw access to the DICOM tags of an instance ------------------------------ |
| 2882 | |
| 974 | 2883 static void GetRawContent(RestApiGetCall& call) |
| 782 | 2884 { |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2885 if (call.IsDocumentation()) |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2886 { |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2887 call.GetDocumentation() |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2888 .SetTag("Instances") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2889 .SetSummary("Get raw tag") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2890 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2891 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
5393
c5c00bee291a
in openapi generator: renamed '...' into 'path' since '...' is an invalid name
Alain Mazy <am@osimis.io>
parents:
5392
diff
changeset
|
2892 .SetUriArgument("path", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2893 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2894 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2895 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2896 "or JSON array containing the list of available tags if accessing a dataset"); |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2897 return; |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2898 } |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2899 |
| 782 | 2900 std::string id = call.GetUriComponent("id", ""); |
| 2901 | |
| 2902 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
| 2903 | |
| 2904 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
| 2905 } | |
| 2906 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2907 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2908 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2909 static bool ExtractSharedTags(Json::Value& shared, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2910 ServerContext& context, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2911 const std::string& publicId) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2912 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2913 // Retrieve all the instances of this patient/study/series |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2914 typedef std::list<std::string> Instances; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2915 Instances instances; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2916 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2917 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2918 // Loop over the instances |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2919 bool isFirst = true; |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2920 shared = Json::objectValue; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2921 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2922 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2923 it != instances.end(); ++it) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2924 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2925 // Get the tags of the current instance, in the simplified format |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2926 Json::Value tags; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2927 |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2928 try |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2929 { |
| 2124 | 2930 context.ReadDicomAsJson(tags, *it); |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2931 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2932 catch (OrthancException&) |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2933 { |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2934 // Race condition: This instance has been removed since |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2935 // (*). Ignore this instance. |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2936 continue; |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2937 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2938 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2939 if (tags.type() != Json::objectValue) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2940 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2941 return false; // Error |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2942 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2943 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2944 // Only keep the tags that are mapped to a string |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2945 Json::Value::Members members = tags.getMemberNames(); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2946 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2947 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2948 const Json::Value& tag = tags[members[i]]; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2949 if (tag.type() != Json::objectValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2950 tag["Type"].type() != Json::stringValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2951 tag["Type"].asString() != "String") |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2952 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2953 tags.removeMember(members[i]); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2954 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2955 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2956 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2957 if (isFirst) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2958 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2959 // This is the first instance, keep its tags as such |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2960 shared = tags; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2961 isFirst = false; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2962 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2963 else |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2964 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2965 // Loop over all the members of the shared tags extracted so |
|
1fbe89dc18b5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2966 // far. If the value of one of these tags does not match its |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2967 // value in the current instance, remove it. |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2968 members = shared.getMemberNames(); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2969 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2970 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2971 if (!tags.isMember(members[i]) || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2972 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
|
958
1fbe89dc18b5
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2973 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2974 shared.removeMember(members[i]); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2975 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2976 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2977 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2978 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2979 |
|
960
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2980 return true; |
|
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2981 } |
|
abac5c83134f
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parents:
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diff
changeset
|
2982 |
|
abac5c83134f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2983 |
| 974 | 2984 static void GetSharedTags(RestApiGetCall& call) |
|
960
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diff
changeset
|
2985 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2986 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2987 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2988 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2989 |
|
4416
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2990 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2991 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2992 call.GetDocumentation() |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2993 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2994 .SetSummary("Get shared tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2995 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2996 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2997 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2998 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2999 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
3000 return; |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3001 } |
|
0b27841950d5
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diff
changeset
|
3002 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
3003 ServerContext& context = OrthancRestApi::GetContext(call); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
3004 std::string publicId = call.GetUriComponent("id", ""); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
3005 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
3006 Json::Value sharedTags; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
3007 if (ExtractSharedTags(sharedTags, context, publicId)) |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
3008 { |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
3009 // Success: Send the value of the shared tags |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3010 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
3011 } |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
3012 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
3013 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
3014 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3015 template <enum ResourceType resourceType, |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3016 enum DicomModule module> |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3017 static void GetModule(RestApiGetCall& call) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3018 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3019 if (call.IsDocumentation()) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3020 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3021 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3022 std::string m; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3023 switch (module) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3024 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3025 case DicomModule_Patient: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3026 m = "patient"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3027 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3028 case DicomModule_Study: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3029 m = "study"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3030 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3031 case DicomModule_Series: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3032 m = "series"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3033 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3034 case DicomModule_Instance: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3035 m = "instance"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3036 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3037 default: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3038 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3039 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3040 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3041 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3042 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3043 call.GetDocumentation() |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3044 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3045 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3046 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3047 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3048 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3049 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3050 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3051 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3052 return; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3053 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3054 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3055 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3056 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3057 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3058 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3059 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3060 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
|
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
3061 { |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
3062 throw OrthancException(ErrorCode_NotImplemented); |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
3063 } |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
3064 |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3065 ServerContext& context = OrthancRestApi::GetContext(call); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3066 std::string publicId = call.GetUriComponent("id", ""); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3067 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3068 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3069 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3070 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3071 typedef std::set<DicomTag> ModuleTags; |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3072 ModuleTags moduleTags; |
| 1368 | 3073 DicomTag::AddTagsForModule(moduleTags, module); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3074 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3075 Json::Value tags; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3076 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3077 if (resourceType != ResourceType_Instance) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3078 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3079 // Retrieve all the instances of this patient/study/series |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3080 typedef std::list<std::string> Instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3081 Instances instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3082 context.GetIndex().GetChildInstances(instances, publicId); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3083 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3084 if (instances.empty()) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3085 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3086 return; // Error: No instance (should never happen) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3087 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3088 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3089 // Select one child instance |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3090 publicId = instances.front(); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3091 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3092 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3093 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3094 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3095 // Filter the tags of the instance according to the module |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3096 Json::Value result = Json::objectValue; |
| 1303 | 3097 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3098 { |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3099 std::string s = tag->Format(); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3100 if (tags.isMember(s)) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3101 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3102 result[s] = tags[s]; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3103 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3104 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3105 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3106 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
963
81134ea872ff
retrieve values of modules
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parents:
960
diff
changeset
|
3107 } |
|
81134ea872ff
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parents:
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diff
changeset
|
3108 |
|
81134ea872ff
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parents:
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diff
changeset
|
3109 |
| 1722 | 3110 namespace |
| 3111 { | |
| 3112 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
| 3113 } | |
| 3114 | |
| 3115 | |
| 3116 static void AccumulateLookupResults(LookupResults& result, | |
|
1718
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getting rid of an IDatabaseWrapper::LookupIdentifier flavor
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parents:
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diff
changeset
|
3117 ServerIndex& index, |
|
2b812969e136
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parents:
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diff
changeset
|
3118 const DicomTag& tag, |
|
1719
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fix Orthanc.test_lookup
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parents:
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diff
changeset
|
3119 const std::string& value, |
|
3b1f7e706d38
fix Orthanc.test_lookup
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parents:
1718
diff
changeset
|
3120 ResourceType level) |
|
1718
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getting rid of an IDatabaseWrapper::LookupIdentifier flavor
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parents:
1703
diff
changeset
|
3121 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
3122 std::vector<std::string> tmp; |
|
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
3123 index.LookupIdentifierExact(tmp, level, tag, value); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3124 |
|
3034
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
3125 for (size_t i = 0; i < tmp.size(); i++) |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3126 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
3127 result.push_back(std::make_pair(level, tmp[i])); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
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parents:
1718
diff
changeset
|
3128 } |
|
1718
2b812969e136
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parents:
1703
diff
changeset
|
3129 } |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3130 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
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parents:
1703
diff
changeset
|
3131 |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
1054
diff
changeset
|
3132 static void Lookup(RestApiPostCall& call) |
|
f167b672db94
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parents:
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diff
changeset
|
3133 { |
| 4422 | 3134 if (call.IsDocumentation()) |
| 3135 { | |
| 3136 call.GetDocumentation() | |
| 3137 .SetTag("System") | |
| 3138 .SetSummary("Look for DICOM identifiers") | |
| 3139 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
| 3140 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
| 3141 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
| 3142 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
| 3143 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
| 3144 "DICOM resource that is stored by Orthanc"); | |
| 3145 return; | |
| 3146 } | |
| 3147 | |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
3148 std::string tag; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
3149 call.BodyToString(tag); |
|
1139
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parents:
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diff
changeset
|
3150 |
| 1722 | 3151 LookupResults resources; |
|
1718
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getting rid of an IDatabaseWrapper::LookupIdentifier flavor
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parents:
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diff
changeset
|
3152 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3153 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3154 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3155 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3156 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3157 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3158 Json::Value result = Json::arrayValue; |
| 1722 | 3159 for (LookupResults::const_iterator |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3160 it = resources.begin(); it != resources.end(); ++it) |
|
1139
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diff
changeset
|
3161 { |
|
f167b672db94
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parents:
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diff
changeset
|
3162 ResourceType type = it->first; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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changeset
|
3163 const std::string& id = it->second; |
|
f167b672db94
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parents:
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diff
changeset
|
3164 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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diff
changeset
|
3165 Json::Value item = Json::objectValue; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
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1054
diff
changeset
|
3166 item["Type"] = EnumerationToString(type); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
changeset
|
3167 item["ID"] = id; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
changeset
|
3168 item["Path"] = GetBasePath(type, id); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3169 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
changeset
|
3170 result.append(item); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
1054
diff
changeset
|
3171 } |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
changeset
|
3172 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
changeset
|
3173 call.GetOutput().AnswerJson(result); |
|
f167b672db94
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3174 } |
|
f167b672db94
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diff
changeset
|
3175 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3176 |
|
3001
7695a9c81099
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parents:
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diff
changeset
|
3177 namespace |
|
7695a9c81099
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parents:
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diff
changeset
|
3178 { |
|
3021
2cbafb5d5a62
renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
3179 class FindVisitor : public ServerContext::ILookupVisitor |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
changeset
|
3180 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
changeset
|
3181 private: |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
changeset
|
3182 bool isComplete_; |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
2998
diff
changeset
|
3183 std::list<std::string> resources_; |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3184 FindStorageAccessMode findStorageAccessMode_; |
|
4937
3f9b9865c8cc
include requested tags from storage if needed
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4936
diff
changeset
|
3185 |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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4936
diff
changeset
|
3186 // cache the data we used during lookup and that we could reuse when building the answers |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3187 std::map<std::string, std::string> instancesIds_; // the id of an instance for each found resource. |
|
3f9b9865c8cc
include requested tags from storage if needed
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parents:
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diff
changeset
|
3188 std::map<std::string, boost::shared_ptr<DicomMap> > resourcesMainDicomTags_; // all tags read from DB for a resource (current level and upper levels) |
|
5060
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3189 std::map<std::string, boost::shared_ptr<Json::Value> > resourcesDicomAsJson_; // the dicom-as-json for a resource |
|
4937
3f9b9865c8cc
include requested tags from storage if needed
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parents:
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diff
changeset
|
3190 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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4694
diff
changeset
|
3191 DicomToJsonFormat format_; |
|
3001
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refactoring /tools/find using LookupResource::IVisitor
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changeset
|
3192 |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
changeset
|
3193 public: |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
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5054
diff
changeset
|
3194 explicit FindVisitor(DicomToJsonFormat format, FindStorageAccessMode findStorageAccessMode) : |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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4694
diff
changeset
|
3195 isComplete_(false), |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
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5054
diff
changeset
|
3196 findStorageAccessMode_(findStorageAccessMode), |
|
4697
569d9ef165b1
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changeset
|
3197 format_(format) |
|
3001
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|
3198 { |
|
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|
3199 } |
| 4205 | 3200 |
| 3201 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
|
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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3003
diff
changeset
|
3202 { |
|
af1530b45290
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3003
diff
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|
3203 return false; // (*) |
|
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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|
3204 } |
|
af1530b45290
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|
3205 |
| 4205 | 3206 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
|
3001
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|
3207 { |
|
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|
3208 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
|
7695a9c81099
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|
3209 } |
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|
3210 |
|
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|
3211 virtual void Visit(const std::string& publicId, |
|
4937
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3212 const std::string& instanceId, |
|
3f9b9865c8cc
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|
3213 const DicomMap& mainDicomTags, |
|
3f9b9865c8cc
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|
3214 const Json::Value* dicomAsJson) ORTHANC_OVERRIDE |
|
3001
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changeset
|
3215 { |
|
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|
3216 resources_.push_back(publicId); |
|
4937
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|
3217 instancesIds_[publicId] = instanceId; |
|
3f9b9865c8cc
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changeset
|
3218 resourcesMainDicomTags_[publicId].reset(mainDicomTags.Clone()); |
|
5060
e69a3ff39bc5
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Alain Mazy <am@osimis.io>
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diff
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|
3219 if (dicomAsJson != NULL) |
|
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
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diff
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|
3220 { |
|
e69a3ff39bc5
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diff
changeset
|
3221 resourcesDicomAsJson_[publicId].reset(new Json::Value(*dicomAsJson)); // keep our own copy because we might reuse it between lookup and answers |
|
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
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|
3222 } |
|
e69a3ff39bc5
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diff
changeset
|
3223 else |
|
e69a3ff39bc5
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5058
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changeset
|
3224 { |
|
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3225 resourcesDicomAsJson_[publicId] = boost::shared_ptr<Json::Value>(); |
|
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3226 } |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3227 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3228 |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3229 void Answer(RestApiOutput& output, |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3230 ServerContext& context, |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3231 ResourceType level, |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3232 bool expand, |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3233 const std::set<DicomTag>& requestedTags) const |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3234 { |
|
5554
12d8a1a266e9
introduction of FindRequest and FindResponse
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5485
diff
changeset
|
3235 AnswerListOfResources1(output, context, resources_, instancesIds_, resourcesMainDicomTags_, resourcesDicomAsJson_, level, expand, format_, requestedTags, IsStorageAccessAllowedForAnswers(findStorageAccessMode_)); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3236 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3237 }; |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3238 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3239 |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3240 |
| 1354 | 3241 static void Find(RestApiPostCall& call) |
| 3242 { | |
| 2998 | 3243 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
| 3244 static const char* const KEY_EXPAND = "Expand"; | |
| 3245 static const char* const KEY_LEVEL = "Level"; | |
| 3246 static const char* const KEY_LIMIT = "Limit"; | |
| 3247 static const char* const KEY_QUERY = "Query"; | |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3248 static const char* const KEY_REQUESTED_TAGS = "RequestedTags"; |
| 2998 | 3249 static const char* const KEY_SINCE = "Since"; |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3250 static const char* const KEY_LABELS = "Labels"; // New in Orthanc 1.12.0 |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3251 static const char* const KEY_LABELS_CONSTRAINT = "LabelsConstraint"; // New in Orthanc 1.12.0 |
|
5825
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3252 static const char* const KEY_ORDER_BY = "OrderBy"; // New in Orthanc 1.12.5 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3253 static const char* const KEY_ORDER_BY_KEY = "Key"; // New in Orthanc 1.12.5 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3254 static const char* const KEY_ORDER_BY_TYPE = "Type"; // New in Orthanc 1.12.5 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3255 static const char* const KEY_ORDER_BY_DIRECTION = "Direction"; // New in Orthanc 1.12.5 |
|
5826
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3256 static const char* const KEY_PARENT_PATIENT = "ParentPatient"; // New in Orthanc 1.12.5 |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3257 static const char* const KEY_PARENT_STUDY = "ParentStudy"; // New in Orthanc 1.12.5 |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3258 static const char* const KEY_PARENT_SERIES = "ParentSeries"; // New in Orthanc 1.12.5 |
| 5828 | 3259 static const char* const KEY_QUERY_METADATA = "QueryMetadata"; // New in Orthanc 1.12.5 |
| 2998 | 3260 |
| 4421 | 3261 if (call.IsDocumentation()) |
| 3262 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3263 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3264 |
| 4421 | 3265 call.GetDocumentation() |
| 3266 .SetTag("System") | |
| 3267 .SetSummary("Look for local resources") | |
| 3268 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
| 3269 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3270 "https://orthanc.uclouvain.be/book/users/rest.html#performing-finds-within-orthanc") |
| 4421 | 3271 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, |
| 3272 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
| 3273 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
| 3274 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
| 3275 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
| 3276 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
| 3277 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
| 3278 "Limit the number of reported resources", false) | |
| 3279 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
| 3280 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3281 .SetRequestField(KEY_REQUESTED_TAGS, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3282 "A list of DICOM tags to include in the response (applicable only if \"Expand\" is set to true). " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3283 "The tags requested tags are returned in the 'RequestedTags' field in the response. " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3284 "Note that, if you are requesting tags that are not listed in the Main Dicom Tags stored in DB, building the response " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3285 "might be slow since Orthanc will need to access the DICOM files. If not specified, Orthanc will return " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3286 "all Main Dicom Tags to keep backward compatibility with Orthanc prior to 1.11.0.", false) |
| 4421 | 3287 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, |
| 3288 "Associative array containing the filter on the values of the DICOM tags", true) | |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3289 .SetRequestField(KEY_LABELS, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3290 "List of strings specifying which labels to look for in the resources (new in Orthanc 1.12.0)", true) |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3291 .SetRequestField(KEY_LABELS_CONSTRAINT, RestApiCallDocumentation::Type_String, |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3292 "Constraint on the labels, can be `All`, `Any`, or `None` (defaults to `All`, new in Orthanc 1.12.0)", true) |
|
5825
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3293 .SetRequestField(KEY_ORDER_BY, RestApiCallDocumentation::Type_JsonListOfObjects, |
|
5826
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3294 "Array of associative arrays containing the requested ordering (new in Orthanc 1.12.5)", true) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3295 .SetRequestField(KEY_PARENT_PATIENT, RestApiCallDocumentation::Type_String, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3296 "Limit the reported resources to descendants of this patient (new in Orthanc 1.12.5)", true) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3297 .SetRequestField(KEY_PARENT_STUDY, RestApiCallDocumentation::Type_String, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3298 "Limit the reported resources to descendants of this study (new in Orthanc 1.12.5)", true) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3299 .SetRequestField(KEY_PARENT_SERIES, RestApiCallDocumentation::Type_String, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3300 "Limit the reported resources to descendants of this series (new in Orthanc 1.12.5)", true) |
| 5828 | 3301 .SetRequestField(KEY_QUERY_METADATA, RestApiCallDocumentation::Type_JsonObject, |
| 3302 "Associative array containing the filter on the values of the metadata (new in Orthanc 1.12.5)", true) | |
| 4421 | 3303 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 3304 "about the reported resources (if `Expand` argument is `true`)"); | |
| 3305 return; | |
| 3306 } | |
| 3307 | |
| 1358 | 3308 ServerContext& context = OrthancRestApi::GetContext(call); |
| 1354 | 3309 |
| 3310 Json::Value request; | |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3311 if (!call.ParseJsonRequest(request) || |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3312 request.type() != Json::objectValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3313 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3314 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3315 "The body must contain a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3316 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3317 else if (!request.isMember(KEY_LEVEL) || |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3318 request[KEY_LEVEL].type() != Json::stringValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3319 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3320 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3321 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3322 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3323 else if (!request.isMember(KEY_QUERY) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3324 request[KEY_QUERY].type() != Json::objectValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3325 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3326 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3327 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3328 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3329 else if (request.isMember(KEY_CASE_SENSITIVE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3330 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3331 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3332 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3333 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" must be a Boolean"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3334 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3335 else if (request.isMember(KEY_LIMIT) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3336 request[KEY_LIMIT].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3337 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3338 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3339 "Field \"" + std::string(KEY_LIMIT) + "\" must be an integer"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3340 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3341 else if (request.isMember(KEY_SINCE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3342 request[KEY_SINCE].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3343 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3344 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3345 "Field \"" + std::string(KEY_SINCE) + "\" must be an integer"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3346 } |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3347 else if (request.isMember(KEY_REQUESTED_TAGS) && |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3348 request[KEY_REQUESTED_TAGS].type() != Json::arrayValue) |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3349 { |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3350 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3351 "Field \"" + std::string(KEY_REQUESTED_TAGS) + "\" must be an array"); |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3352 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3353 else if (request.isMember(KEY_LABELS) && |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3354 request[KEY_LABELS].type() != Json::arrayValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3355 { |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3356 throw OrthancException(ErrorCode_BadRequest, |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3357 "Field \"" + std::string(KEY_LABELS) + "\" must be an array of strings"); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3358 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3359 else if (request.isMember(KEY_LABELS_CONSTRAINT) && |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3360 request[KEY_LABELS_CONSTRAINT].type() != Json::stringValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3361 { |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3362 throw OrthancException(ErrorCode_BadRequest, |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3363 "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be an array of strings"); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3364 } |
|
5825
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3365 else if (request.isMember(KEY_ORDER_BY) && |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3366 request[KEY_ORDER_BY].type() != Json::arrayValue) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3367 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3368 throw OrthancException(ErrorCode_BadRequest, |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3369 "Field \"" + std::string(KEY_ORDER_BY) + "\" must be an array"); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3370 } |
| 5828 | 3371 else if (request.isMember(KEY_QUERY_METADATA) && |
| 3372 request[KEY_QUERY_METADATA].type() != Json::objectValue) | |
| 3373 { | |
| 3374 throw OrthancException(ErrorCode_BadRequest, | |
| 3375 "Field \"" + std::string(KEY_QUERY_METADATA) + "\" must be an JSON object"); | |
| 3376 } | |
|
5826
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3377 else if (request.isMember(KEY_PARENT_PATIENT) && |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3378 request[KEY_PARENT_PATIENT].type() != Json::stringValue) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3379 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3380 throw OrthancException(ErrorCode_BadRequest, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3381 "Field \"" + std::string(KEY_PARENT_PATIENT) + "\" must be a string"); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3382 } |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3383 else if (request.isMember(KEY_PARENT_STUDY) && |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3384 request[KEY_PARENT_STUDY].type() != Json::stringValue) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3385 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3386 throw OrthancException(ErrorCode_BadRequest, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3387 "Field \"" + std::string(KEY_PARENT_STUDY) + "\" must be a string"); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3388 } |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3389 else if (request.isMember(KEY_PARENT_SERIES) && |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3390 request[KEY_PARENT_SERIES].type() != Json::stringValue) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3391 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3392 throw OrthancException(ErrorCode_BadRequest, |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3393 "Field \"" + std::string(KEY_PARENT_SERIES) + "\" must be a string"); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3394 } |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3395 else if (true) |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3396 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3397 /** |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3398 * EXPERIMENTAL VERSION |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3399 **/ |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3400 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3401 bool expand = false; |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3402 if (request.isMember(KEY_EXPAND)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3403 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3404 expand = request[KEY_EXPAND].asBool(); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3405 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3406 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3407 const ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3408 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3409 ResourceFinder finder(level, expand); |
|
5688
d0a264b803f1
first implementation of database paging
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5684
diff
changeset
|
3410 finder.SetDatabaseLimits(context.GetDatabaseLimits(level)); |
|
5709
476b1db52110
removed the "format_" member from ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5708
diff
changeset
|
3411 |
|
476b1db52110
removed the "format_" member from ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5708
diff
changeset
|
3412 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3413 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3414 if (request.isMember(KEY_LIMIT)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3415 { |
| 5693 | 3416 int64_t tmp = request[KEY_LIMIT].asInt64(); |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3417 if (tmp < 0) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3418 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3419 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3420 "Field \"" + std::string(KEY_LIMIT) + "\" must be a positive integer"); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3421 } |
| 5695 | 3422 else if (tmp != 0) // This is for compatibility with Orthanc 1.12.4 |
| 5693 | 3423 { |
| 3424 finder.SetLimitsCount(static_cast<uint64_t>(tmp)); | |
| 3425 } | |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3426 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3427 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3428 if (request.isMember(KEY_SINCE)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3429 { |
| 5693 | 3430 int64_t tmp = request[KEY_SINCE].asInt64(); |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3431 if (tmp < 0) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3432 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3433 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3434 "Field \"" + std::string(KEY_SINCE) + "\" must be a positive integer"); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3435 } |
| 5693 | 3436 else |
| 3437 { | |
| 3438 finder.SetLimitsSince(static_cast<uint64_t>(tmp)); | |
| 3439 } | |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3440 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3441 |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3442 { |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3443 bool caseSensitive = false; |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3444 if (request.isMember(KEY_CASE_SENSITIVE)) |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3445 { |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3446 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3447 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3448 |
| 5828 | 3449 { // DICOM Tag query |
| 3450 DatabaseLookup dicomTagLookup; | |
| 3451 | |
| 3452 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); | |
| 3453 for (size_t i = 0; i < members.size(); i++) | |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3454 { |
| 5828 | 3455 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
| 3456 { | |
| 3457 throw OrthancException(ErrorCode_BadRequest, | |
| 3458 "Tag \"" + members[i] + "\" must be associated with a string"); | |
| 3459 } | |
| 3460 | |
| 3461 const std::string value = request[KEY_QUERY][members[i]].asString(); | |
| 3462 | |
| 3463 if (!value.empty()) | |
| 3464 { | |
| 3465 // An empty string corresponds to an universal constraint, | |
| 3466 // so we ignore it. This mimics the behavior of class | |
| 3467 // "OrthancFindRequestHandler" | |
| 3468 dicomTagLookup.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), | |
| 3469 value, caseSensitive, true); | |
| 3470 } | |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3471 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3472 |
| 5828 | 3473 finder.SetDatabaseLookup(dicomTagLookup); |
| 3474 } | |
| 3475 | |
| 3476 { // Metadata query | |
| 3477 Json::Value::Members members = request[KEY_QUERY_METADATA].getMemberNames(); | |
| 3478 for (size_t i = 0; i < members.size(); i++) | |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3479 { |
| 5828 | 3480 if (request[KEY_QUERY_METADATA][members[i]].type() != Json::stringValue) |
| 3481 { | |
| 3482 throw OrthancException(ErrorCode_BadRequest, | |
| 3483 "Tag \"" + members[i] + "\" must be associated with a string"); | |
| 3484 } | |
| 3485 MetadataType metadata = StringToMetadata(members[i]); | |
| 3486 | |
| 3487 const std::string value = request[KEY_QUERY_METADATA][members[i]].asString(); | |
| 3488 | |
| 3489 if (!value.empty()) | |
| 3490 { | |
| 3491 if (value.find('\\') != std::string::npos) | |
| 3492 { | |
| 3493 std::vector<std::string> items; | |
| 3494 Toolbox::TokenizeString(items, value, '\\'); | |
| 3495 | |
| 3496 finder.AddMetadataConstraint(new DatabaseMetadataConstraint(metadata, ConstraintType_List, items, caseSensitive)); | |
| 3497 } | |
| 3498 else if (value.find('*') != std::string::npos || value.find('?') != std::string::npos) | |
| 3499 { | |
| 3500 finder.AddMetadataConstraint(new DatabaseMetadataConstraint(metadata, ConstraintType_Wildcard, value, caseSensitive)); | |
| 3501 } | |
| 3502 else | |
| 3503 { | |
| 3504 finder.AddMetadataConstraint(new DatabaseMetadataConstraint(metadata, ConstraintType_Equal, value, caseSensitive)); | |
| 3505 } | |
| 3506 } | |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3507 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3508 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3509 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3510 |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3511 if (request.isMember(KEY_REQUESTED_TAGS)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3512 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3513 std::set<DicomTag> requestedTags; |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3514 FromDcmtkBridge::ParseListOfTags(requestedTags, request[KEY_REQUESTED_TAGS]); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3515 finder.AddRequestedTags(requestedTags); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3516 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3517 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3518 if (request.isMember(KEY_LABELS)) // New in Orthanc 1.12.0 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3519 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3520 for (Json::Value::ArrayIndex i = 0; i < request[KEY_LABELS].size(); i++) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3521 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3522 if (request[KEY_LABELS][i].type() != Json::stringValue) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3523 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3524 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS) + "\" must contain strings"); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3525 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3526 else |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3527 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3528 finder.AddLabel(request[KEY_LABELS][i].asString()); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3529 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3530 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3531 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3532 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3533 finder.SetLabelsConstraint(LabelsConstraint_All); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3534 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3535 if (request.isMember(KEY_LABELS_CONSTRAINT)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3536 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3537 const std::string& s = request[KEY_LABELS_CONSTRAINT].asString(); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3538 if (s == "All") |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3539 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3540 finder.SetLabelsConstraint(LabelsConstraint_All); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3541 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3542 else if (s == "Any") |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3543 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3544 finder.SetLabelsConstraint(LabelsConstraint_Any); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3545 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3546 else if (s == "None") |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3547 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3548 finder.SetLabelsConstraint(LabelsConstraint_None); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3549 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3550 else |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3551 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3552 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be \"All\", \"Any\", or \"None\""); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3553 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3554 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3555 |
|
5826
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3556 if (request.isMember(KEY_PARENT_PATIENT)) // New in Orthanc 1.12.5 |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3557 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3558 finder.SetOrthancId(ResourceType_Patient, request[KEY_PARENT_PATIENT].asString()); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3559 } |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3560 else if (request.isMember(KEY_PARENT_STUDY)) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3561 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3562 finder.SetOrthancId(ResourceType_Study, request[KEY_PARENT_STUDY].asString()); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3563 } |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3564 else if (request.isMember(KEY_PARENT_SERIES)) |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3565 { |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3566 finder.SetOrthancId(ResourceType_Series, request[KEY_PARENT_SERIES].asString()); |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3567 } |
|
d73dfb4548c6
tools/find: ParentPatient and co ..
Alain Mazy <am@orthanc.team>
parents:
5825
diff
changeset
|
3568 |
|
5825
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3569 if (request.isMember(KEY_ORDER_BY)) // New in Orthanc 1.12.5 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3570 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3571 for (Json::Value::ArrayIndex i = 0; i < request[KEY_ORDER_BY].size(); i++) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3572 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3573 if (request[KEY_ORDER_BY][i].type() != Json::objectValue) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3574 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3575 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY) + "\" must contain objects"); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3576 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3577 else |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3578 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3579 const Json::Value& order = request[KEY_ORDER_BY][i]; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3580 FindRequest::OrderingDirection direction; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3581 std::string directionString; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3582 std::string typeString; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3583 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3584 if (!order.isMember(KEY_ORDER_BY_KEY) || order[KEY_ORDER_BY_KEY].type() != Json::stringValue) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3585 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3586 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY_KEY) + "\" must be a string"); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3587 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3588 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3589 if (!order.isMember(KEY_ORDER_BY_DIRECTION) || order[KEY_ORDER_BY_DIRECTION].type() != Json::stringValue) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3590 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3591 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY_DIRECTION) + "\" must be \"ASC\" or \"DESC\""); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3592 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3593 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3594 Toolbox::ToLowerCase(directionString, order[KEY_ORDER_BY_DIRECTION].asString()); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3595 if (directionString == "asc") |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3596 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3597 direction = FindRequest::OrderingDirection_Ascending; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3598 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3599 else if (directionString == "desc") |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3600 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3601 direction = FindRequest::OrderingDirection_Descending; |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3602 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3603 else |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3604 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3605 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY_DIRECTION) + "\" must be \"ASC\" or \"DESC\""); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3606 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3607 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3608 if (!order.isMember(KEY_ORDER_BY_TYPE) || order[KEY_ORDER_BY_TYPE].type() != Json::stringValue) |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3609 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3610 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY_TYPE) + "\" must be \"DicomTag\" or \"Metadata\""); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3611 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3612 |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3613 Toolbox::ToLowerCase(typeString, order[KEY_ORDER_BY_TYPE].asString()); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3614 if (typeString == "dicomtag") |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3615 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3616 DicomTag tag = FromDcmtkBridge::ParseTag(order[KEY_ORDER_BY_KEY].asString()); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3617 finder.AddOrdering(tag, direction); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3618 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3619 else if (typeString == "metadata") |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3620 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3621 MetadataType metadata = StringToMetadata(order[KEY_ORDER_BY_KEY].asString()); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3622 finder.AddOrdering(metadata, direction); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3623 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3624 else |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3625 { |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3626 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_ORDER_BY_TYPE) + "\" must be \"DicomTag\" or \"Metadata\""); |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3627 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3628 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3629 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3630 } |
|
881cd0965146
added OrderBy support in SQLite
Alain Mazy <am@orthanc.team>
parents:
5817
diff
changeset
|
3631 |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3632 Json::Value answer; |
|
5713
d851a54e49b7
removed "includeAllMetadata_" member from ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5709
diff
changeset
|
3633 finder.Execute(answer, context, format, false /* no "Metadata" field */); |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3634 call.GetOutput().AnswerJson(answer); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3635 } |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3636 else |
| 1354 | 3637 { |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3638 /** |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3639 * VERSION IN ORTHANC <= 1.12.4 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3640 **/ |
| 1354 | 3641 bool expand = false; |
| 2998 | 3642 if (request.isMember(KEY_EXPAND)) |
| 1354 | 3643 { |
| 2998 | 3644 expand = request[KEY_EXPAND].asBool(); |
| 1354 | 3645 } |
| 3646 | |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3647 bool caseSensitive = false; |
| 2998 | 3648 if (request.isMember(KEY_CASE_SENSITIVE)) |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3649 { |
| 2998 | 3650 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3651 } |
|
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3652 |
| 1758 | 3653 size_t limit = 0; |
| 2998 | 3654 if (request.isMember(KEY_LIMIT)) |
| 1758 | 3655 { |
| 2998 | 3656 int tmp = request[KEY_LIMIT].asInt(); |
| 1847 | 3657 if (tmp < 0) |
| 1758 | 3658 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3659 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3660 "Field \"" + std::string(KEY_LIMIT) + "\" must be a positive integer"); |
| 1758 | 3661 } |
| 1847 | 3662 |
| 3663 limit = static_cast<size_t>(tmp); | |
| 1758 | 3664 } |
| 3665 | |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3666 size_t since = 0; |
| 2998 | 3667 if (request.isMember(KEY_SINCE)) |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3668 { |
| 2998 | 3669 int tmp = request[KEY_SINCE].asInt(); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3670 if (tmp < 0) |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3671 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3672 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3673 "Field \"" + std::string(KEY_SINCE) + "\" must be a positive integer"); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3674 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3675 |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3676 since = static_cast<size_t>(tmp); |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3677 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3678 |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3679 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3680 |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3681 if (request.isMember(KEY_REQUESTED_TAGS)) |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3682 { |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3683 FromDcmtkBridge::ParseListOfTags(requestedTags, request[KEY_REQUESTED_TAGS]); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3684 } |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3685 |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3686 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
| 1360 | 3687 |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3688 DatabaseLookup query; |
| 1358 | 3689 |
| 2998 | 3690 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
| 1354 | 3691 for (size_t i = 0; i < members.size(); i++) |
| 3692 { | |
| 2998 | 3693 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
| 1354 | 3694 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3695 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3696 "Tag \"" + members[i] + "\" must be associated with a string"); |
| 1354 | 3697 } |
| 3698 | |
|
3163
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3699 const std::string value = request[KEY_QUERY][members[i]].asString(); |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3700 |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3701 if (!value.empty()) |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3702 { |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3703 // An empty string corresponds to an universal constraint, |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3704 // so we ignore it. This mimics the behavior of class |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3705 // "OrthancFindRequestHandler" |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3706 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3707 value, caseSensitive, true); |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3708 } |
|
1361
94ffb597d297
refactoring of C-Find SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1360
diff
changeset
|
3709 } |
| 2876 | 3710 |
|
5683
0c218d90096e
moved handling of labels out of DatabaseLookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5655
diff
changeset
|
3711 std::set<std::string> labels; |
|
0c218d90096e
moved handling of labels out of DatabaseLookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5655
diff
changeset
|
3712 |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3713 if (request.isMember(KEY_LABELS)) // New in Orthanc 1.12.0 |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3714 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3715 for (Json::Value::ArrayIndex i = 0; i < request[KEY_LABELS].size(); i++) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3716 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3717 if (request[KEY_LABELS][i].type() != Json::stringValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3718 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3719 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS) + "\" must contain strings"); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3720 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3721 else |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3722 { |
|
5683
0c218d90096e
moved handling of labels out of DatabaseLookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5655
diff
changeset
|
3723 labels.insert(request[KEY_LABELS][i].asString()); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3724 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3725 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3726 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3727 |
|
5683
0c218d90096e
moved handling of labels out of DatabaseLookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5655
diff
changeset
|
3728 LabelsConstraint labelsConstraint = LabelsConstraint_All; |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3729 |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3730 if (request.isMember(KEY_LABELS_CONSTRAINT)) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3731 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3732 const std::string& s = request[KEY_LABELS_CONSTRAINT].asString(); |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3733 if (s == "All") |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3734 { |
|
5683
0c218d90096e
moved handling of labels out of DatabaseLookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5655
diff
changeset
|
3735 labelsConstraint = LabelsConstraint_All; |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3736 } |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3737 else if (s == "Any") |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3738 { |
|
5683
0c218d90096e
moved handling of labels out of DatabaseLookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5655
diff
changeset
|
3739 labelsConstraint = LabelsConstraint_Any; |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3740 } |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3741 else if (s == "None") |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3742 { |
|
5683
0c218d90096e
moved handling of labels out of DatabaseLookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5655
diff
changeset
|
3743 labelsConstraint = LabelsConstraint_None; |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3744 } |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3745 else |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3746 { |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3747 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be \"All\", \"Any\", or \"None\""); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3748 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3749 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3750 |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3751 FindVisitor visitor(OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human), context.GetFindStorageAccessMode()); |
|
5683
0c218d90096e
moved handling of labels out of DatabaseLookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5655
diff
changeset
|
3752 context.Apply(visitor, query, level, labels, labelsConstraint, since, limit); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3753 visitor.Answer(call.GetOutput(), context, level, expand, requestedTags); |
| 1354 | 3754 } |
| 3755 } | |
| 3756 | |
| 3757 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3758 template <enum ResourceType start, |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3759 enum ResourceType end> |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3760 static void GetChildResources(RestApiGetCall& call) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3761 { |
| 4415 | 3762 if (call.IsDocumentation()) |
| 3763 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3764 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3765 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3766 |
| 4415 | 3767 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
| 3768 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3769 call.GetDocumentation() | |
| 3770 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3771 .SetSummary("Get child " + children) | |
| 3772 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3773 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3774 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3775 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
|
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3776 "If false or missing, only retrieve the list of child " + children, false) |
| 4415 | 3777 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) |
| 3778 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
| 3779 return; | |
| 3780 } | |
| 3781 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3782 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3783 ServerContext& context = OrthancRestApi::GetContext(call); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3784 |
|
5617
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3785 const bool expand = (!call.HasArgument("expand") || |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3786 // this "expand" is the only one to have a false default value to keep backward compatibility |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3787 call.GetBooleanArgument("expand", false)); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3788 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3789 |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3790 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3791 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3792 |
|
5665
d8c86698110c
implemented computed tag: Instance Availability
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5656
diff
changeset
|
3793 if (true) |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3794 { |
|
5617
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3795 /** |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3796 * EXPERIMENTAL VERSION |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3797 **/ |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3798 |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3799 ResourceFinder finder(end, expand); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3800 finder.SetOrthancId(start, call.GetUriComponent("id", "")); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3801 finder.AddRequestedTags(requestedTags); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3802 |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3803 Json::Value answer; |
|
5713
d851a54e49b7
removed "includeAllMetadata_" member from ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5709
diff
changeset
|
3804 finder.Execute(answer, context, format, false /* no "Metadata" field */); |
|
5617
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3805 call.GetOutput().AnswerJson(answer); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3806 } |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3807 else |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3808 { |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3809 /** |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3810 * VERSION IN ORTHANC <= 1.12.4 |
|
5617
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3811 **/ |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3812 std::list<std::string> a, b, c; |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3813 a.push_back(call.GetUriComponent("id", "")); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3814 |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3815 ResourceType type = start; |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3816 while (type != end) |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3817 { |
|
5617
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3818 b.clear(); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3819 |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3820 for (std::list<std::string>::const_iterator |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3821 it = a.begin(); it != a.end(); ++it) |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3822 { |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3823 index.GetChildren(c, *it); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3824 b.splice(b.begin(), c); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3825 } |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3826 |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3827 type = GetChildResourceType(type); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3828 |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3829 a.clear(); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3830 a.splice(a.begin(), b); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3831 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3832 |
|
5617
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3833 AnswerListOfResources2(call.GetOutput(), context, a, type, expand, format, requestedTags, true /* allowStorageAccess */); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3834 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3835 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3836 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3837 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3838 static void GetChildInstancesTags(RestApiGetCall& call) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3839 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3840 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3841 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3842 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3843 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3844 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3845 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3846 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3847 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3848 .SetSummary("Get tags of instances") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3849 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3850 " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3851 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3852 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3853 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3854 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3855 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3856 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3857 } |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3858 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3859 ServerContext& context = OrthancRestApi::GetContext(call); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3860 std::string publicId = call.GetUriComponent("id", ""); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3861 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3862 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3863 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3864 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3865 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3866 // Retrieve all the instances of this patient/study/series |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3867 typedef std::list<std::string> Instances; |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3868 Instances instances; |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3869 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3870 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3871 |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3872 Json::Value result = Json::objectValue; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3873 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3874 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 3875 it != instances.end(); ++it) |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3876 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3877 Json::Value full; |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3878 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3879 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3880 if (format != DicomToJsonFormat_Full) |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3881 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3882 Json::Value simplified; |
|
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
3883 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3884 result[*it] = simplified; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3885 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3886 else |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3887 { |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3888 result[*it] = full; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3889 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3890 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3891 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3892 call.GetOutput().AnswerJson(result); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3893 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3894 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3895 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3896 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3897 template <enum ResourceType start, |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3898 enum ResourceType end> |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3899 static void GetParentResource(RestApiGetCall& call) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3900 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3901 assert(start > end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3902 |
| 4415 | 3903 if (call.IsDocumentation()) |
| 3904 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3905 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3906 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3907 |
| 4415 | 3908 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
| 3909 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3910 call.GetDocumentation() | |
| 3911 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3912 .SetSummary("Get parent " + parent) | |
| 3913 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3914 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3915 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 3916 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
| 3917 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
| 3918 return; | |
| 3919 } | |
| 3920 | |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3921 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3922 |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3923 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3924 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3925 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3926 std::string current = call.GetUriComponent("id", ""); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3927 ResourceType currentType = start; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3928 while (currentType > end) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3929 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3930 std::string parent; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3931 if (!index.LookupParent(parent, current)) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3932 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3933 // Error that could happen if the resource gets deleted by |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3934 // another concurrent call |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3935 return; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3936 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3937 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3938 current = parent; |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3939 currentType = GetParentResourceType(currentType); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3940 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3941 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3942 assert(currentType == end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3943 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3944 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3945 |
| 4554 | 3946 Json::Value resource; |
|
5708
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3947 |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3948 if (true) |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3949 { |
|
5708
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3950 /** |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3951 * EXPERIMENTAL VERSION |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3952 **/ |
|
5714
2b05428843d2
removed dangerous overload of ResourceFinder::Execute()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5713
diff
changeset
|
3953 if (ExpandResource(resource, OrthancRestApi::GetContext(call), currentType, current, format, false)) |
|
5708
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3954 { |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3955 call.GetOutput().AnswerJson(resource); |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3956 } |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3957 } |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3958 else |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3959 { |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3960 /** |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3961 * VERSION IN ORTHANC <= 1.12.4 |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3962 **/ |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3963 if (OrthancRestApi::GetContext(call).ExpandResource(resource, current, end, format, requestedTags, true /* allowStorageAccess */)) |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3964 { |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3965 call.GetOutput().AnswerJson(resource); |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3966 } |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3967 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3968 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3969 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3970 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3971 static void ExtractPdf(RestApiGetCall& call) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3972 { |
| 4407 | 3973 if (call.IsDocumentation()) |
| 3974 { | |
| 3975 call.GetDocumentation() | |
| 3976 .SetTag("Instances") | |
| 3977 .SetSummary("Get embedded PDF") | |
| 3978 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
| 3979 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
| 3980 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
| 3981 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
| 3982 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
| 3983 return; | |
| 3984 } | |
| 3985 | |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3986 const std::string id = call.GetUriComponent("id", ""); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3987 std::string pdf; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3988 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3989 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3990 if (locker.GetDicom().ExtractPdf(pdf)) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3991 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3992 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3993 return; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3994 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3995 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3996 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3997 |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3998 static void OrderSlices(RestApiGetCall& call) |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3999 { |
| 4421 | 4000 if (call.IsDocumentation()) |
| 4001 { | |
| 4002 call.GetDocumentation() | |
| 4003 .SetDeprecated() | |
| 4004 .SetTag("Series") | |
| 4005 .SetSummary("Order the slices") | |
| 4006 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
| 4007 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
| 4008 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
| 4009 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 4010 "Ordered list of paths to DICOM instances") | |
| 4011 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 4012 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
| 4013 "in the case of multiframe images.") | |
| 4014 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
| 4015 "Same information as the `Slices` field, but in a compact form") | |
| 4016 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
| 4017 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
4018 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); |
| 4421 | 4019 return; |
| 4020 } | |
| 4021 | |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4022 const std::string id = call.GetUriComponent("id", ""); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4023 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4024 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4025 SliceOrdering ordering(index, id); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4026 |
|
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
4027 Json::Value result; |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
4028 ordering.Format(result); |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
4029 call.GetOutput().AnswerJson(result); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4030 } |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4031 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4032 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4033 static void GetInstanceHeader(RestApiGetCall& call) |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4034 { |
| 4404 | 4035 if (call.IsDocumentation()) |
| 4036 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4037 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 4038 call.GetDocumentation() |
| 4039 .SetTag("Instances") | |
| 4040 .SetSummary("Get DICOM meta-header") | |
| 4041 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
| 4042 "combines hexadecimal tags with human-readable description.") | |
| 4043 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 4044 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
4045 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); |
| 4404 | 4046 return; |
| 4047 } | |
| 4048 | |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4049 ServerContext& context = OrthancRestApi::GetContext(call); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4050 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4051 std::string publicId = call.GetUriComponent("id", ""); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4052 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4053 std::string dicomContent; |
|
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
4054 context.ReadDicomForHeader(dicomContent, publicId); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4055 |
|
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
4056 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
4057 // speed up things here |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
4058 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4059 ParsedDicomFile dicom(dicomContent); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4060 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4061 Json::Value header; |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
4062 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4063 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4064 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4065 } |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4066 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4067 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4068 static void InvalidateTags(RestApiPostCall& call) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4069 { |
| 4420 | 4070 if (call.IsDocumentation()) |
| 4071 { | |
| 4072 call.GetDocumentation() | |
| 4073 .SetTag("System") | |
| 4074 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
| 4075 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
| 4076 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
| 4077 "This is notably useful after changes to the `Dictionary` configuration option. " | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
4078 "https://orthanc.uclouvain.be/book/faq/orthanc-storage.html#storage-area"); |
| 4420 | 4079 return; |
| 4080 } | |
| 4081 | |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4082 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4083 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4084 // Loop over the instances, grouping them by parent studies so as |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4085 // to avoid large memory consumption |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4086 std::list<std::string> studies; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4087 index.GetAllUuids(studies, ResourceType_Study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4088 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4089 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4090 study = studies.begin(); study != studies.end(); ++study) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4091 { |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4092 std::list<std::string> instances; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4093 index.GetChildInstances(instances, *study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4094 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4095 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4096 instance = instances.begin(); instance != instances.end(); ++instance) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4097 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
4098 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
4099 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4100 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4101 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4102 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
4103 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4104 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4105 |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4106 void DocumentReconstructFilesField(RestApiPostCall& call, bool documentLimitField) |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4107 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4108 call.GetDocumentation() |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4109 .SetRequestField(RECONSTRUCT_FILES, RestApiCallDocumentation::Type_Boolean, |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4110 "Also reconstruct the files of the resources (e.g: apply IngestTranscoding, StorageCompression). " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4111 "'false' by default. (New in Orthanc 1.11.0)", false); |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4112 if (documentLimitField) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4113 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4114 call.GetDocumentation() |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4115 .SetRequestField(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS, RestApiCallDocumentation::Type_Boolean, |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4116 "Only reconstruct this level MainDicomTags by re-reading them from a random child instance of the resource. " |
| 5655 | 4117 "This option is much faster than a full reconstruct and is useful e.g. if you have modified the " |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4118 "'ExtraMainDicomTags' at the Study level to optimize the speed of some C-Find. " |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4119 "'false' by default. (New in Orthanc 1.12.4)", false); |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4120 } |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4121 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4122 |
| 4994 | 4123 bool GetReconstructFilesField(const RestApiPostCall& call) |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4124 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4125 bool reconstructFiles = false; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4126 Json::Value request; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4127 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4128 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(RECONSTRUCT_FILES)) // allow "" payload to keep backward compatibility |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4129 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4130 if (!request[RECONSTRUCT_FILES].isBool()) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4131 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4132 throw OrthancException(ErrorCode_BadFileFormat, |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4133 "The field " + std::string(RECONSTRUCT_FILES) + " must contain a Boolean"); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4134 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4135 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4136 reconstructFiles = request[RECONSTRUCT_FILES].asBool(); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4137 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4138 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4139 return reconstructFiles; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4140 } |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4141 |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4142 bool GetLimitToThisLevelMainDicomTags(const RestApiPostCall& call) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4143 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4144 bool limitToThisLevel = false; |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4145 Json::Value request; |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4146 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4147 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS)) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4148 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4149 if (!request[LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS].isBool()) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4150 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4151 throw OrthancException(ErrorCode_BadFileFormat, |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4152 "The field " + std::string(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS) + " must contain a Boolean"); |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4153 } |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4154 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4155 limitToThisLevel = request[LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS].asBool(); |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4156 } |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4157 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4158 return limitToThisLevel; |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4159 } |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4160 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4161 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4162 template <enum ResourceType type> |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4163 static void ReconstructResource(RestApiPostCall& call) |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4164 { |
| 4420 | 4165 if (call.IsDocumentation()) |
| 4166 { | |
| 4167 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
| 4168 call.GetDocumentation() | |
| 4169 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4170 .SetSummary("Reconstruct tags & optionally files of " + resource) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4171 .SetDescription("Reconstruct the main DICOM tags in DB of the " + resource + " whose Orthanc identifier is provided " |
| 4420 | 4172 "in the URL. This is useful if child studies/series/instances have inconsistent values for " |
| 4173 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
| 4174 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
| 4175 "parsed again, and the Orthanc index will be updated accordingly.") | |
| 4176 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4177 DocumentReconstructFilesField(call, true); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4178 |
| 4420 | 4179 return; |
| 4180 } | |
| 4181 | |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4182 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4183 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", ""), GetReconstructFilesField(call), GetLimitToThisLevelMainDicomTags(call), type); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
4184 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4185 } |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4186 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4187 |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4188 static void ReconstructAllResources(RestApiPostCall& call) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4189 { |
| 4420 | 4190 if (call.IsDocumentation()) |
| 4191 { | |
| 4192 call.GetDocumentation() | |
| 4193 .SetTag("System") | |
| 4194 .SetSummary("Reconstruct all the index") | |
| 4195 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
| 4196 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
| 4197 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4198 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated. " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4199 "If you have a large database to process, it is advised to use the Housekeeper plugin to perform " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4200 "this action resource by resource"); |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4201 DocumentReconstructFilesField(call, false); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4202 |
| 4420 | 4203 return; |
| 4204 } | |
| 4205 | |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4206 ServerContext& context = OrthancRestApi::GetContext(call); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4207 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4208 std::list<std::string> studies; |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4209 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
4210 bool reconstructFiles = GetReconstructFilesField(call); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4211 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4212 for (std::list<std::string>::const_iterator |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4213 study = studies.begin(); study != studies.end(); ++study) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4214 { |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
4215 ServerToolbox::ReconstructResource(context, *study, reconstructFiles, false, ResourceType_Study /* dummy */); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4216 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4217 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
4218 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4219 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4220 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4221 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4222 static void GetBulkChildren(std::set<std::string>& target, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4223 ServerIndex& index, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4224 const std::set<std::string>& source) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4225 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4226 target.clear(); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4227 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4228 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4229 it = source.begin(); it != source.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4230 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4231 std::list<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4232 index.GetChildren(children, *it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4233 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4234 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4235 child = children.begin(); child != children.end(); ++child) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4236 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4237 target.insert(*child); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4238 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4239 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4240 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4241 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4242 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4243 static void AddMetadata(Json::Value& target, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4244 ServerIndex& index, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4245 const std::string& resource, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4246 ResourceType level) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4247 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4248 target = Json::objectValue; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4249 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4250 std::map<MetadataType, std::string> content; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4251 index.GetAllMetadata(content, resource, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4252 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4253 for (std::map<MetadataType, std::string>::const_iterator |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4254 it = content.begin(); it != content.end(); ++it) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4255 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4256 target[EnumerationToString(it->first)] = it->second; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4257 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4258 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4259 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4260 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4261 static void BulkContent(RestApiPostCall& call) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4262 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4263 static const char* const LEVEL = "Level"; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4264 static const char* const METADATA = "Metadata"; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
4265 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4266 if (call.IsDocumentation()) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4267 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4268 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4269 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4270 call.GetDocumentation() |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4271 .SetTag("System") |
| 4879 | 4272 .SetSummary("Describe a set of resources") |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4273 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4274 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4275 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4276 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
4277 "`Instance`). Orthanc will loop over the items inside `Resources`, and explore upward or " |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4278 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4279 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4280 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4281 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4282 "whose identifiers are provided in the `Resources` field, in one single call."); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4283 return; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4284 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4285 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4286 Json::Value request; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4287 if (!call.ParseJsonRequest(request) || |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4288 request.type() != Json::objectValue) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4289 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4290 throw OrthancException(ErrorCode_BadRequest, |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4291 "The body must contain a JSON object"); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4292 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4293 else |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4294 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4295 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4296 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4297 bool metadata = true; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4298 if (request.isMember(METADATA)) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4299 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4300 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4301 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4302 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4303 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4304 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4305 Json::Value answer = Json::arrayValue; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4306 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4307 if (request.isMember(LEVEL)) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4308 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4309 // Complex case: Need to explore the DICOM hierarchy |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4310 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4311 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4312 std::set<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4313 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4698
diff
changeset
|
4314 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4315 std::set<std::string> interest; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4316 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4317 assert(ResourceType_Patient < ResourceType_Study && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4698
diff
changeset
|
4318 ResourceType_Study < ResourceType_Series && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4319 ResourceType_Series < ResourceType_Instance); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4320 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4321 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4322 it = resources.begin(); it != resources.end(); ++it) |
|
4698
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4323 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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4698
diff
changeset
|
4324 ResourceType type; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4698
diff
changeset
|
4325 if (index.LookupResourceType(type, *it)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4326 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4327 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4328 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4329 // This resource is already from the level of interest |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4330 interest.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4331 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4332 else if (type < level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4333 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4334 // Need to explore children |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4335 std::set<std::string> current; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4336 current.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4337 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4338 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4339 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4340 std::set<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4341 GetBulkChildren(children, index, current); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4342 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4343 type = GetChildResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4344 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4345 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4346 for (std::set<std::string>::const_iterator |
| 4716 | 4347 it2 = children.begin(); it2 != children.end(); ++it2) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4348 { |
| 4716 | 4349 interest.insert(*it2); |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4350 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4351 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4352 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4353 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4354 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4355 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4356 current.swap(children); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4357 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4358 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4359 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4360 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4361 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4362 // Need to explore parents |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4363 std::string current = *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4364 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4365 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4366 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4367 std::string parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4368 if (index.LookupParent(parent, current)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4369 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4370 type = GetParentResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4371 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4372 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4373 interest.insert(parent); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4374 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4375 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4376 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4377 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4378 current = parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4379 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4380 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4381 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4382 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4383 break; // The resource has been deleted during the exploration |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4384 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4385 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4386 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4387 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4388 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4389 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4390 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4391 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4392 } |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4393 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4394 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4395 it = interest.begin(); it != interest.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4396 { |
|
5708
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4397 if (true) |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4398 { |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4399 /** |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4400 * EXPERIMENTAL VERSION |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4401 **/ |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4402 Json::Value item; |
|
5714
2b05428843d2
removed dangerous overload of ResourceFinder::Execute()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5713
diff
changeset
|
4403 if (ExpandResource(item, OrthancRestApi::GetContext(call), level, *it, format, metadata)) |
|
5708
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4404 { |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4405 answer.append(item); |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4406 } |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4407 } |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4408 else |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4409 { |
|
5708
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4410 /** |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4411 * VERSION IN ORTHANC <= 1.12.4 |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4412 **/ |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4413 Json::Value item; |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4414 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4415 |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4416 if (OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4417 { |
|
5708
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4418 if (metadata) |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4419 { |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4420 AddMetadata(item[METADATA], index, *it, level); |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4421 } |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4422 |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4423 answer.append(item); |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4424 } |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4425 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4426 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4427 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4428 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4429 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4430 // Simple case: We return the queried resources as such |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4431 std::list<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4432 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4433 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4434 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4435 it = resources.begin(); it != resources.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4436 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4437 ResourceType level; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4438 Json::Value item; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
4439 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
4440 |
|
5708
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4441 if (true) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4442 { |
|
5708
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4443 /** |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4444 * EXPERIMENTAL VERSION |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4445 **/ |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4446 if (index.LookupResourceType(level, *it) && |
|
5714
2b05428843d2
removed dangerous overload of ResourceFinder::Execute()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5713
diff
changeset
|
4447 ExpandResource(item, OrthancRestApi::GetContext(call), level, *it, format, metadata)) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4448 { |
|
5708
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4449 answer.append(item); |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4450 } |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4451 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4452 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4453 { |
|
5708
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4454 /** |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4455 * VERSION IN ORTHANC <= 1.12.4 |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4456 **/ |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4457 if (index.LookupResourceType(level, *it) && |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4458 OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4459 { |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4460 if (metadata) |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4461 { |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4462 AddMetadata(item[METADATA], index, *it, level); |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4463 } |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4464 |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4465 answer.append(item); |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4466 } |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4467 else |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4468 { |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4469 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
1891a8c2dbb4
added ExpandResource utility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
4470 } |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4471 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4472 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4473 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4474 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4475 call.GetOutput().AnswerJson(answer); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4476 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4477 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4478 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4479 |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4480 static void BulkDelete(RestApiPostCall& call) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4481 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4482 if (call.IsDocumentation()) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4483 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4484 call.GetDocumentation() |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4485 .SetTag("System") |
| 4879 | 4486 .SetSummary("Delete a set of resources") |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4487 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4488 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4489 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4490 "whose identifiers are provided in the `Resources` field."); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4491 return; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4492 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4493 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4494 ServerContext& context = OrthancRestApi::GetContext(call); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4495 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4496 Json::Value request; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4497 if (!call.ParseJsonRequest(request) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4498 request.type() != Json::objectValue) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4499 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4500 throw OrthancException(ErrorCode_BadRequest, |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4501 "The body must contain a JSON object"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4502 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4503 else |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4504 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4505 std::set<std::string> resources; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4506 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4507 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4508 for (std::set<std::string>::const_iterator |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4509 it = resources.begin(); it != resources.end(); ++it) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4510 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4511 ResourceType type; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4512 Json::Value remainingAncestor; // Unused |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4513 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4514 if (!context.GetIndex().LookupResourceType(type, *it) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4515 !context.DeleteResource(remainingAncestor, *it, type)) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4516 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4517 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4518 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4519 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4520 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4521 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4522 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4523 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4524 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4525 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4526 void OrthancRestApi::RegisterResources() |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4527 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4528 Register("/instances", ListResources<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4529 Register("/patients", ListResources<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4530 Register("/series", ListResources<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4531 Register("/studies", ListResources<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4532 |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4533 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4534 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4535 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4536 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4537 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4538 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4539 |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4540 Register("/tools/bulk-delete", BulkDelete); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4541 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4542 else |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4543 { |
| 5817 | 4544 LOG(WARNING) << "READ-ONLY SYSTEM: deactivating DELETE routes"; |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4545 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4546 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4547 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4548 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4549 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4550 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4551 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4552 Register("/instances/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4553 Register("/patients/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4554 Register("/studies/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4555 Register("/series/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4556 |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4557 Register("/patients/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4558 Register("/series/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4559 Register("/studies/{id}/shared-tags", GetSharedTags); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
4560 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4561 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4562 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4563 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4564 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4565 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
4566 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4567 Register("/instances/{id}/file", GetInstanceFile); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4568 Register("/instances/{id}/export", ExportInstanceFile); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4569 Register("/instances/{id}/tags", GetInstanceTags); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4570 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4571 Register("/instances/{id}/frames", ListFrames); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4572 |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
4573 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4574 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4575 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4576 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4577 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4578 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4579 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4580 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4581 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4582 Register("/instances/{id}/frames/{frame}/numpy", GetNumpyFrame); // New in Orthanc 1.10.0 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
4583 Register("/instances/{id}/pdf", ExtractPdf); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4584 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4585 Register("/instances/{id}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4586 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4587 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4588 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4589 Register("/instances/{id}/matlab", GetMatlabImage); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4590 Register("/instances/{id}/header", GetInstanceHeader); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4591 Register("/instances/{id}/numpy", GetNumpyInstance); // New in Orthanc 1.10.0 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4592 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4593 Register("/patients/{id}/protected", IsProtectedPatient); |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4594 |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4595 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4596 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4597 Register("/patients/{id}/protected", SetPatientProtection); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4598 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4599 else |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4600 { |
| 5817 | 4601 LOG(WARNING) << "READ-ONLY SYSTEM: deactivating PUT /patients/{id}/protected route"; |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4602 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4603 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4604 |
| 4409 | 4605 std::vector<std::string> resourceTypes; |
| 4606 resourceTypes.push_back("patients"); | |
| 4607 resourceTypes.push_back("studies"); | |
| 4608 resourceTypes.push_back("series"); | |
| 4609 resourceTypes.push_back("instances"); | |
| 4610 | |
| 4611 for (size_t i = 0; i < resourceTypes.size(); i++) | |
| 4612 { | |
| 4613 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
| 4614 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
| 4615 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
| 4616 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4617 |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4618 // New in Orthanc 1.12.0 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4619 Register("/" + resourceTypes[i] + "/{id}/labels", ListLabels); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4620 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", GetLabel); |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4621 |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4622 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4623 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4624 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", RemoveLabel); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4625 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", AddLabel); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4626 } |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4627 |
| 4409 | 4628 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
| 4629 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
| 4630 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
| 4631 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
| 4632 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
| 4633 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
| 4634 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
| 4635 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
| 4636 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
4637 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/info", GetAttachmentInfo); |
| 4409 | 4638 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4639 |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4640 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4641 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4642 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4643 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4644 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4645 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4646 } |
| 4409 | 4647 } |
| 782 | 4648 |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4649 if (context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4650 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4651 LOG(WARNING) << "READ-ONLY SYSTEM: deactivating PUT, POST and DELETE attachments routes"; |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4652 LOG(WARNING) << "READ-ONLY SYSTEM: deactivating PUT and DELETE labels routes"; |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4653 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4654 |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4655 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4656 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4657 Register("/tools/invalidate-tags", InvalidateTags); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4658 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4659 |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4660 Register("/tools/lookup", Lookup); |
| 1354 | 4661 Register("/tools/find", Find); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4662 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4663 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4664 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4665 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4666 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4667 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4668 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4669 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4670 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4671 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4672 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4673 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4674 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4675 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4676 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4677 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4678 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4679 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4680 |
| 782 | 4681 Register("/instances/{id}/content/*", GetRawContent); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4682 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4683 Register("/series/{id}/ordered-slices", OrderSlices); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4684 Register("/series/{id}/numpy", GetNumpySeries); // New in Orthanc 1.10.0 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4685 |
|
5783
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4686 if (!context_.IsReadOnly()) |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4687 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4688 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4689 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4690 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4691 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4692 Register("/tools/reconstruct", ReconstructAllResources); |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4693 } |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4694 else |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4695 { |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4696 LOG(WARNING) << "READ-ONLY SYSTEM: deactivating /reconstruct routes"; |
|
56352ae88120
wip: new ReadOnly configuration
Alain Mazy <am@orthanc.team>
parents:
5714
diff
changeset
|
4697 } |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4698 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4699 Register("/tools/bulk-content", BulkContent); |
|
5804
25df40a274fd
/changes: allowing filtering on multiple changes
Alain Mazy <am@orthanc.team>
parents:
5783
diff
changeset
|
4700 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4701 } |