Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 5640:f7adfb22e20e
updated copyright, as Orthanc Team now replaces Osimis
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Thu, 30 May 2024 21:19:57 +0200 |
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children | 3f13db27b399 f048683aa619 |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2024-2024 Orthanc Team SRL, Belgium |
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7 * Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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8 * |
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9 * This program is free software: you can redistribute it and/or |
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10 * modify it under the terms of the GNU General Public License as |
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11 * published by the Free Software Foundation, either version 3 of the |
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12 * License, or (at your option) any later version. |
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13 * |
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14 * This program is distributed in the hope that it will be useful, but |
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15 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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17 * General Public License for more details. |
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18 * |
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19 * You should have received a copy of the GNU General Public License |
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20 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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21 **/ |
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22 |
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23 |
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24 #include "../PrecompiledHeadersServer.h" |
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25 #include "OrthancRestApi.h" |
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26 |
4045 | 27 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
28 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
29 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
30 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
31 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
32 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
33 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
34 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
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35 #include "../../../OrthancFramework/Sources/Images/NumpyWriter.h" |
4045 | 36 #include "../../../OrthancFramework/Sources/Logging.h" |
37 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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38 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
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40 #include "../OrthancConfiguration.h" |
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41 #include "../Search/DatabaseLookup.h" |
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42 #include "../ServerContext.h" |
2131 | 43 #include "../ServerToolbox.h" |
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44 #include "../SliceOrdering.h" |
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45 |
3687 | 46 // This "include" is mandatory for Release builds using Linux Standard Base |
47 #include <boost/math/special_functions/round.hpp> | |
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48 #include <boost/shared_ptr.hpp> |
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49 |
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50 /** |
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51 * This semaphore is used to limit the number of concurrent HTTP |
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52 * requests on CPU-intensive routes of the REST API, in order to |
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53 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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54 **/ |
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55 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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56 |
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57 |
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58 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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59 |
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60 static const char* const IGNORE_LENGTH = "ignore-length"; |
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61 static const char* const RECONSTRUCT_FILES = "ReconstructFiles"; |
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62 static const char* const LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS = "LimitToThisLevelMainDicomTags"; |
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63 |
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64 |
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65 namespace Orthanc |
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66 { |
4415 | 67 static std::string GetDocumentationSampleResource(ResourceType type) |
68 { | |
69 switch (type) | |
70 { | |
71 case Orthanc::ResourceType_Instance: | |
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72 return "https://orthanc.uclouvain.be/demo/instances/6582b1c0-292ad5ab-ba0f088f-f7a1766f-9a29a54f"; |
4415 | 73 break; |
74 | |
75 case Orthanc::ResourceType_Series: | |
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76 return "https://orthanc.uclouvain.be/demo/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; |
4415 | 77 break; |
78 | |
79 case Orthanc::ResourceType_Study: | |
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80 return "https://orthanc.uclouvain.be/demo/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; |
4415 | 81 break; |
82 | |
83 case Orthanc::ResourceType_Patient: | |
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84 return "https://orthanc.uclouvain.be/demo/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; |
4415 | 85 break; |
86 | |
87 default: | |
88 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
89 } | |
90 } | |
91 | |
92 | |
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93 static void AnswerDicomAsJson(RestApiCall& call, |
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94 const Json::Value& dicom, |
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95 DicomToJsonFormat mode) |
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96 { |
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97 if (mode != DicomToJsonFormat_Full) |
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98 { |
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99 Json::Value simplified; |
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100 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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101 call.GetOutput().AnswerJson(simplified); |
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102 } |
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103 else |
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104 { |
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105 call.GetOutput().AnswerJson(dicom); |
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106 } |
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107 } |
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108 |
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109 |
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110 static void ParseSetOfTags(std::set<DicomTag>& target, |
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111 const RestApiGetCall& call, |
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112 const std::string& argument) |
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113 { |
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114 target.clear(); |
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115 |
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116 if (call.HasArgument(argument)) |
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117 { |
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118 std::vector<std::string> tags; |
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119 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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120 |
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121 for (size_t i = 0; i < tags.size(); i++) |
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122 { |
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123 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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124 } |
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125 } |
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126 } |
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127 |
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128 |
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129 // List all the patients, studies, series or instances ---------------------- |
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130 |
1354 | 131 static void AnswerListOfResources(RestApiOutput& output, |
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132 ServerContext& context, |
1354 | 133 const std::list<std::string>& resources, |
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134 const std::map<std::string, std::string>& instancesIds, // optional: the id of an instance for each found resource. |
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135 const std::map<std::string, boost::shared_ptr<DicomMap> >& resourcesMainDicomTags, // optional: all tags read from DB for a resource (current level and upper levels) |
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136 const std::map<std::string, boost::shared_ptr<Json::Value> >& resourcesDicomAsJson, // optional: the dicom-as-json for each resource |
1354 | 137 ResourceType level, |
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138 bool expand, |
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139 DicomToJsonFormat format, |
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140 const std::set<DicomTag>& requestedTags, |
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141 bool allowStorageAccess) |
1354 | 142 { |
143 Json::Value answer = Json::arrayValue; | |
144 | |
145 for (std::list<std::string>::const_iterator | |
1384 | 146 resource = resources.begin(); resource != resources.end(); ++resource) |
1354 | 147 { |
148 if (expand) | |
149 { | |
4554 | 150 Json::Value expanded; |
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151 |
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152 std::map<std::string, std::string>::const_iterator instanceId = instancesIds.find(*resource); |
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153 if (instanceId != instancesIds.end()) // if it is found in instancesIds, it is also in resourcesDicomAsJson and mainDicomTags |
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154 { |
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155 // reuse data already collected before (e.g during lookup) |
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156 std::map<std::string, boost::shared_ptr<DicomMap> >::const_iterator mainDicomTags = resourcesMainDicomTags.find(*resource); |
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157 std::map<std::string, boost::shared_ptr<Json::Value> >::const_iterator dicomAsJson = resourcesDicomAsJson.find(*resource); |
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158 |
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159 context.ExpandResource(expanded, *resource, |
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160 *(mainDicomTags->second.get()), |
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161 instanceId->second, |
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162 dicomAsJson->second.get(), |
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163 level, format, requestedTags, allowStorageAccess); |
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164 } |
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165 else |
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166 { |
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167 context.ExpandResource(expanded, *resource, level, format, requestedTags, allowStorageAccess); |
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168 } |
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169 |
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170 if (expanded.type() == Json::objectValue) |
1354 | 171 { |
4554 | 172 answer.append(expanded); |
1354 | 173 } |
174 } | |
175 else | |
176 { | |
177 answer.append(*resource); | |
178 } | |
179 } | |
180 | |
181 output.AnswerJson(answer); | |
182 } | |
183 | |
184 | |
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185 static void AnswerListOfResources(RestApiOutput& output, |
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186 ServerContext& context, |
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187 const std::list<std::string>& resources, |
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188 ResourceType level, |
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189 bool expand, |
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190 DicomToJsonFormat format, |
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191 const std::set<DicomTag>& requestedTags, |
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192 bool allowStorageAccess) |
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193 { |
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194 std::map<std::string, std::string> unusedInstancesIds; |
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195 std::map<std::string, boost::shared_ptr<DicomMap> > unusedResourcesMainDicomTags; |
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196 std::map<std::string, boost::shared_ptr<Json::Value> > unusedResourcesDicomAsJson; |
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197 |
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198 AnswerListOfResources(output, context, resources, unusedInstancesIds, unusedResourcesMainDicomTags, unusedResourcesDicomAsJson, level, expand, format, requestedTags, allowStorageAccess); |
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199 } |
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200 |
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201 |
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202 template <enum ResourceType resourceType> |
974 | 203 static void ListResources(RestApiGetCall& call) |
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204 { |
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205 if (call.IsDocumentation()) |
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206 { |
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207 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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208 OrthancRestApi::DocumentRequestedTags(call); |
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209 |
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210 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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211 call.GetDocumentation() |
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212 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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213 .SetSummary("List the available " + resources) |
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214 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
4403 | 215 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
216 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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217 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
4403 | 218 "If present, retrieve detailed information about the individual " + resources, false) |
4404 | 219 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
220 "about the reported " + resources + " (if `expand` argument is provided)") | |
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221 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/" + resources + "?since=0&limit=2", true); |
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222 return; |
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223 } |
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224 |
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225 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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226 ServerContext& context = OrthancRestApi::GetContext(call); |
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227 |
1354 | 228 std::list<std::string> result; |
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229 |
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230 std::set<DicomTag> requestedTags; |
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231 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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232 |
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233 if (call.HasArgument("limit") || |
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234 call.HasArgument("since")) |
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235 { |
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236 if (!call.HasArgument("limit")) |
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237 { |
2955 | 238 throw OrthancException(ErrorCode_BadRequest, |
239 "Missing \"limit\" argument for GET request against: " + | |
240 call.FlattenUri()); | |
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241 } |
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242 |
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243 if (!call.HasArgument("since")) |
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244 { |
2955 | 245 throw OrthancException(ErrorCode_BadRequest, |
246 "Missing \"since\" argument for GET request against: " + | |
247 call.FlattenUri()); | |
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248 } |
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249 |
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250 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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251 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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252 index.GetAllUuids(result, resourceType, since, limit); |
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253 } |
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254 else |
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255 { |
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256 index.GetAllUuids(result, resourceType); |
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257 } |
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258 |
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259 AnswerListOfResources(call.GetOutput(), context, result, resourceType, call.HasArgument("expand") && call.GetBooleanArgument("expand", true), |
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260 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), |
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261 requestedTags, |
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262 true /* allowStorageAccess */); |
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263 } |
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264 |
4409 | 265 |
266 | |
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267 template <enum ResourceType resourceType> |
974 | 268 static void GetSingleResource(RestApiGetCall& call) |
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269 { |
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270 if (call.IsDocumentation()) |
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271 { |
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272 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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273 OrthancRestApi::DocumentRequestedTags(call); |
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274 |
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275 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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276 call.GetDocumentation() |
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277 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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278 .SetSummary("Get information about some " + resource) |
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279 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
4404 | 280 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
4409 | 281 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
282 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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283 return; |
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284 } |
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285 |
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286 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
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287 |
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288 std::set<DicomTag> requestedTags; |
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289 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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290 |
4554 | 291 Json::Value json; |
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292 if (OrthancRestApi::GetContext(call).ExpandResource( |
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293 json, call.GetUriComponent("id", ""), resourceType, format, requestedTags, true /* allowStorageAccess */)) |
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294 { |
4554 | 295 call.GetOutput().AnswerJson(json); |
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296 } |
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297 } |
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298 |
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299 template <enum ResourceType resourceType> |
974 | 300 static void DeleteSingleResource(RestApiDeleteCall& call) |
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301 { |
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302 if (call.IsDocumentation()) |
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303 { |
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304 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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305 call.GetDocumentation() |
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306 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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307 .SetSummary("Delete some " + resource) |
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308 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
4404 | 309 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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310 return; |
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311 } |
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312 |
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313 Json::Value remainingAncestor; |
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314 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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315 { |
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316 call.GetOutput().AnswerJson(remainingAncestor); |
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317 } |
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318 } |
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319 |
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320 |
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321 // Get information about a single patient ----------------------------------- |
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322 |
974 | 323 static void IsProtectedPatient(RestApiGetCall& call) |
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324 { |
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325 if (call.IsDocumentation()) |
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326 { |
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327 call.GetDocumentation() |
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328 .SetTag("Patients") |
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329 .SetSummary("Is the patient protected against recycling?") |
4404 | 330 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
4403 | 331 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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332 return; |
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333 } |
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334 |
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335 std::string publicId = call.GetUriComponent("id", ""); |
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336 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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337 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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338 } |
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339 |
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340 |
974 | 341 static void SetPatientProtection(RestApiPutCall& call) |
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342 { |
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343 if (call.IsDocumentation()) |
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344 { |
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345 call.GetDocumentation() |
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346 .SetTag("Patients") |
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347 .SetSummary("Protect/Unprotect a patient against recycling") |
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348 .SetDescription("Protects a patient by sending `1` or `true` in the payload request. " |
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349 "Unprotects a patient by sending `0` or `false` in the payload requests. " |
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350 "More info: https://orthanc.uclouvain.be/book/faq/features.html#recycling-protection") |
4404 | 351 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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352 return; |
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353 } |
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354 |
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355 ServerContext& context = OrthancRestApi::GetContext(call); |
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356 |
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357 std::string publicId = call.GetUriComponent("id", ""); |
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358 |
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359 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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360 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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361 } |
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362 |
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363 |
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364 // Get information about a single instance ---------------------------------- |
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365 |
974 | 366 static void GetInstanceFile(RestApiGetCall& call) |
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367 { |
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368 static const char* const TRANSCODE = "transcode"; |
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369 |
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370 if (call.IsDocumentation()) |
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371 { |
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372 call.GetDocumentation() |
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373 .SetTag("Instances") |
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374 .SetSummary("Download DICOM") |
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375 .SetDescription("Download one DICOM instance") |
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376 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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377 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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378 .SetHttpGetArgument(TRANSCODE, RestApiCallDocumentation::Type_String, |
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379 "If present, the DICOM file will be transcoded to the provided " |
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380 "transfer syntax: https://orthanc.uclouvain.be/book/faq/transcoding.html", false) |
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381 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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382 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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383 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
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384 return; |
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385 } |
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386 |
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387 ServerContext& context = OrthancRestApi::GetContext(call); |
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388 |
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389 std::string publicId = call.GetUriComponent("id", ""); |
3203
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390 |
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391 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
3203
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392 if (accept != call.GetHttpHeaders().end()) |
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393 { |
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394 // New in Orthanc 1.5.4 |
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395 try |
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396 { |
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397 MimeType mime = StringToMimeType(accept->second.c_str()); |
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398 |
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399 if (mime == MimeType_DicomWebJson || |
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400 mime == MimeType_DicomWebXml) |
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401 { |
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402 DicomWebJsonVisitor visitor; |
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403 |
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404 { |
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405 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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406 locker.GetDicom().Apply(visitor); |
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407 } |
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408 |
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409 if (mime == MimeType_DicomWebJson) |
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410 { |
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411 std::string s = visitor.GetResult().toStyledString(); |
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412 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
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413 } |
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414 else |
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415 { |
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416 std::string xml; |
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417 visitor.FormatXml(xml); |
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418 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
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419 } |
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420 |
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421 return; |
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422 } |
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423 } |
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424 catch (OrthancException&) |
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425 { |
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426 } |
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427 } |
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428 |
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
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diff
changeset
|
429 if (call.HasArgument(TRANSCODE)) |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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430 { |
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
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diff
changeset
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431 std::string source; |
5427 | 432 std::string attachmentId; |
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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diff
changeset
|
433 std::string transcoded; |
5427 | 434 context.ReadDicom(source, attachmentId, publicId); |
435 | |
436 if (context.TranscodeWithCache(transcoded, source, publicId, attachmentId, GetTransferSyntax(call.GetArgument(TRANSCODE, "")))) | |
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
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diff
changeset
|
437 { |
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
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diff
changeset
|
438 call.GetOutput().AnswerBuffer(transcoded, MimeType_Dicom); |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
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diff
changeset
|
439 } |
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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parents:
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diff
changeset
|
440 } |
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
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diff
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|
441 else |
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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diff
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|
442 { |
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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diff
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|
443 // return the attachment without any transcoding |
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
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diff
changeset
|
444 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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diff
changeset
|
445 } |
751
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diff
changeset
|
446 } |
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diff
changeset
|
447 |
5197fd35333c
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|
448 |
974 | 449 static void ExportInstanceFile(RestApiPostCall& call) |
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|
450 { |
4421 | 451 if (call.IsDocumentation()) |
452 { | |
453 call.GetDocumentation() | |
454 .SetTag("Instances") | |
455 .SetSummary("Write DICOM onto filesystem") | |
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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diff
changeset
|
456 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running. This is insecure for " |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
changeset
|
457 "Orthanc servers that are remotely accessible since one could overwrite any system file. " |
5275
8686476e9d12
fix inclusion of winsock.h
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parents:
5274
diff
changeset
|
458 "Since Orthanc 1.12.0, this route is disabled by default, but can be enabled using " |
8686476e9d12
fix inclusion of winsock.h
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5274
diff
changeset
|
459 "the `RestApiWriteToFileSystemEnabled` configuration option.") |
4421 | 460 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
461 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
462 return; | |
463 } | |
464 | |
751
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refactoring of OrthancRestApi
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changeset
|
465 ServerContext& context = OrthancRestApi::GetContext(call); |
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diff
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|
466 |
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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diff
changeset
|
467 if (!context.IsRestApiWriteToFileSystemEnabled()) |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
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|
468 { |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
changeset
|
469 LOG(ERROR) << "The URI /instances/../export is disallowed for security, " |
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New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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diff
changeset
|
470 << "check your configuration option `RestApiWriteToFileSystemEnabled`"; |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
changeset
|
471 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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diff
changeset
|
472 return; |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
changeset
|
473 } |
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New configuration option 'RestApiWriteToFileSystemEnabled'
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parents:
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diff
changeset
|
474 |
751
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parents:
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changeset
|
475 std::string publicId = call.GetUriComponent("id", ""); |
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refactoring of OrthancRestApi
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diff
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|
476 |
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diff
changeset
|
477 std::string dicom; |
2124 | 478 context.ReadDicom(dicom, publicId); |
751
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
479 |
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
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parents:
1437
diff
changeset
|
480 std::string target; |
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
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1437
diff
changeset
|
481 call.BodyToString(target); |
2140 | 482 SystemToolbox::WriteFile(dicom, target); |
751
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
483 |
2908
9d277f8ad698
new enumeration: MimeType
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parents:
2905
diff
changeset
|
484 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
485 } |
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parents:
diff
changeset
|
486 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
487 |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
488 template <DicomToJsonFormat format> |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
4694
diff
changeset
|
489 static void GetInstanceTagsInternal(RestApiGetCall& call) |
751
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refactoring of OrthancRestApi
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490 { |
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|
491 ServerContext& context = OrthancRestApi::GetContext(call); |
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diff
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|
492 |
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|
493 std::string publicId = call.GetUriComponent("id", ""); |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
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2408
diff
changeset
|
494 |
e4045b3c9772
ignore-length argument if retrieving DICOM tags
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2408
diff
changeset
|
495 std::set<DicomTag> ignoreTagLength; |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
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4716
diff
changeset
|
496 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
497 |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
498 if (format != DicomToJsonFormat_Full || |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
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2408
diff
changeset
|
499 !ignoreTagLength.empty()) |
751
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parents:
diff
changeset
|
500 { |
1146
200fcac0deb4
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501 Json::Value full; |
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502 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
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503 AnswerDicomAsJson(call, full, format); |
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504 } |
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505 else |
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refactoring of OrthancRestApi
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506 { |
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fix spelling errors according to debian
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507 // This path allows one to avoid the JSON decoding if no |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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508 // simplification is asked, and if no "ignore-length" argument |
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New option "?short" to list DICOM tags using their hexadecimal ID
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509 // is present |
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510 Json::Value full; |
2127 | 511 context.ReadDicomAsJson(full, publicId); |
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512 call.GetOutput().AnswerJson(full); |
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513 } |
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514 } |
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515 |
964
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simplify has a GET argument
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516 |
4697
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517 static void GetInstanceTags(RestApiGetCall& call) |
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518 { |
4404 | 519 if (call.IsDocumentation()) |
520 { | |
4697
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521 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
4404 | 522 call.GetDocumentation() |
523 .SetTag("Instances") | |
524 .SetSummary("Get DICOM tags") | |
525 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
526 "combines hexadecimal tags with human-readable description.") | |
527 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
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528 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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529 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
4404 | 530 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
5432
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diff
changeset
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531 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
4404 | 532 return; |
533 } | |
534 | |
4697
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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changeset
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535 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
964
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simplify has a GET argument
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diff
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536 { |
2622
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diff
changeset
|
537 case DicomToJsonFormat_Human: |
4697
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diff
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538 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
2622
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diff
changeset
|
539 break; |
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New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
540 |
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New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
541 case DicomToJsonFormat_Short: |
4697
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
542 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call); |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
543 break; |
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
544 |
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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diff
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|
545 case DicomToJsonFormat_Full: |
4697
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
546 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call); |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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parents:
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diff
changeset
|
547 break; |
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
548 |
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
549 default: |
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
550 throw OrthancException(ErrorCode_InternalError); |
964
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simplify has a GET argument
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diff
changeset
|
551 } |
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diff
changeset
|
552 } |
cc7a4ae474c1
simplify has a GET argument
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diff
changeset
|
553 |
751
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refactoring of OrthancRestApi
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parents:
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changeset
|
554 |
4697
569d9ef165b1
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diff
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555 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
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556 { |
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diff
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557 if (call.IsDocumentation()) |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
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|
558 { |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
559 call.GetDocumentation() |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
560 .SetTag("Instances") |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
561 .SetSummary("Get human-readable tags") |
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changeset
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562 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
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563 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
4722
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added missing documentation of "ignore-length" in "/instances/{id}/tags"
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diff
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|
564 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
4697
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
565 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
566 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
5432
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migration to UCLouvain servers
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parents:
5427
diff
changeset
|
567 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
4697
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
568 return; |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
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diff
changeset
|
569 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
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diff
changeset
|
570 else |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
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diff
changeset
|
571 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
572 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
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|
573 } |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
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diff
changeset
|
574 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
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diff
changeset
|
575 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
576 |
974 | 577 static void ListFrames(RestApiGetCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
578 { |
4414 | 579 if (call.IsDocumentation()) |
580 { | |
581 call.GetDocumentation() | |
582 .SetTag("Instances") | |
583 .SetSummary("List available frames") | |
584 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
585 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
586 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
5432
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migration to UCLouvain servers
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diff
changeset
|
587 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); |
4414 | 588 return; |
589 } | |
590 | |
1950
533ff46e944b
return a single raw frame from DICOM videos
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parents:
1929
diff
changeset
|
591 std::string publicId = call.GetUriComponent("id", ""); |
751
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
592 |
1950
533ff46e944b
return a single raw frame from DICOM videos
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parents:
1929
diff
changeset
|
593 unsigned int numberOfFrames; |
533ff46e944b
return a single raw frame from DICOM videos
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diff
changeset
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594 |
533ff46e944b
return a single raw frame from DICOM videos
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parents:
1929
diff
changeset
|
595 { |
533ff46e944b
return a single raw frame from DICOM videos
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parents:
1929
diff
changeset
|
596 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
533ff46e944b
return a single raw frame from DICOM videos
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diff
changeset
|
597 numberOfFrames = locker.GetDicom().GetFramesCount(); |
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
598 } |
1950
533ff46e944b
return a single raw frame from DICOM videos
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parents:
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diff
changeset
|
599 |
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1929
diff
changeset
|
600 Json::Value result = Json::arrayValue; |
533ff46e944b
return a single raw frame from DICOM videos
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parents:
1929
diff
changeset
|
601 for (unsigned int i = 0; i < numberOfFrames; i++) |
533ff46e944b
return a single raw frame from DICOM videos
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1929
diff
changeset
|
602 { |
533ff46e944b
return a single raw frame from DICOM videos
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diff
changeset
|
603 result.append(i); |
533ff46e944b
return a single raw frame from DICOM videos
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diff
changeset
|
604 } |
533ff46e944b
return a single raw frame from DICOM videos
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parents:
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diff
changeset
|
605 |
533ff46e944b
return a single raw frame from DICOM videos
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parents:
1929
diff
changeset
|
606 call.GetOutput().AnswerJson(result); |
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
607 } |
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
608 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
609 |
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
610 namespace |
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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1773
diff
changeset
|
611 { |
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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1781
diff
changeset
|
612 class ImageToEncode |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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1781
diff
changeset
|
613 { |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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parents:
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diff
changeset
|
614 private: |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
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3690
diff
changeset
|
615 std::unique_ptr<ImageAccessor>& image_; |
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
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parents:
1900
diff
changeset
|
616 ImageExtractionMode mode_; |
2281
e002430baa41
Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
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parents:
2244
diff
changeset
|
617 bool invert_; |
2908
9d277f8ad698
new enumeration: MimeType
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2905
diff
changeset
|
618 MimeType format_; |
1902
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Refactoring leading to speedups with custom image decoders
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diff
changeset
|
619 std::string answer_; |
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
changeset
|
620 |
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621 public: |
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622 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
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623 ImageExtractionMode mode, |
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624 bool invert) : |
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625 image_(image), |
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626 mode_(mode), |
4205 | 627 invert_(invert), |
628 format_(MimeType_Binary) | |
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629 { |
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630 } |
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631 |
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632 void Answer(RestApiOutput& output) |
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633 { |
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634 output.AnswerBuffer(answer_, format_); |
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635 } |
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636 |
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637 void EncodeUsingPng() |
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638 { |
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639 format_ = MimeType_Png; |
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640 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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641 } |
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642 |
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643 void EncodeUsingPam() |
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644 { |
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645 format_ = MimeType_Pam; |
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646 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
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647 } |
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648 |
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649 void EncodeUsingJpeg(uint8_t quality) |
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650 { |
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651 format_ = MimeType_Jpeg; |
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652 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
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653 } |
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654 }; |
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655 |
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656 class EncodePng : public HttpContentNegociation::IHandler |
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657 { |
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658 private: |
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659 ImageToEncode& image_; |
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660 |
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661 public: |
4205 | 662 explicit EncodePng(ImageToEncode& image) : image_(image) |
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663 { |
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664 } |
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665 |
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666 virtual void Handle(const std::string& type, |
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667 const std::string& subtype, |
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668 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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669 { |
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670 assert(type == "image"); |
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671 assert(subtype == "png"); |
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672 image_.EncodeUsingPng(); |
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673 } |
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674 }; |
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675 |
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676 class EncodePam : public HttpContentNegociation::IHandler |
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677 { |
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678 private: |
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679 ImageToEncode& image_; |
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680 |
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681 public: |
4205 | 682 explicit EncodePam(ImageToEncode& image) : image_(image) |
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683 { |
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684 } |
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685 |
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686 virtual void Handle(const std::string& type, |
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687 const std::string& subtype, |
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688 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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689 { |
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690 assert(type == "image"); |
2780 | 691 assert(subtype == "x-portable-arbitrarymap"); |
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692 image_.EncodeUsingPam(); |
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693 } |
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694 }; |
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695 |
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696 class EncodeJpeg : public HttpContentNegociation::IHandler |
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697 { |
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698 private: |
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699 ImageToEncode& image_; |
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700 unsigned int quality_; |
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701 |
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702 public: |
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703 EncodeJpeg(ImageToEncode& image, |
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704 const RestApiGetCall& call) : |
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705 image_(image) |
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706 { |
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707 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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708 bool ok = false; |
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709 |
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710 try |
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711 { |
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712 quality_ = boost::lexical_cast<unsigned int>(v); |
1847 | 713 ok = (quality_ >= 1 && quality_ <= 100); |
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714 } |
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715 catch (boost::bad_lexical_cast&) |
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716 { |
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717 } |
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718 |
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719 if (!ok) |
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720 { |
2955 | 721 throw OrthancException( |
722 ErrorCode_BadRequest, | |
723 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
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724 } |
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725 } |
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726 |
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727 virtual void Handle(const std::string& type, |
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728 const std::string& subtype, |
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changeset
|
729 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
730 { |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
731 assert(type == "image"); |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
732 assert(subtype == "jpeg"); |
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
733 image_.EncodeUsingJpeg(quality_); |
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
734 } |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
735 }; |
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
736 } |
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
737 |
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
738 |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
739 namespace |
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
740 { |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
741 class IDecodedFrameHandler : public boost::noncopyable |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
742 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
743 public: |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
744 virtual ~IDecodedFrameHandler() |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
745 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
746 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
747 |
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
748 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
749 virtual void Handle(RestApiGetCall& call, |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
750 std::unique_ptr<ImageAccessor>& decoded, |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
751 const ParsedDicomFile* dicom, |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
752 unsigned int frame) = 0; |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
753 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
754 virtual bool RequiresDicomTags() const = 0; |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
755 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
756 static void Apply(RestApiGetCall& call, |
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
757 IDecodedFrameHandler& handler, |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
758 ImageExtractionMode mode /* for generation of documentation */, |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
759 bool isRendered /* for generation of documentation */) |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
760 { |
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
761 if (call.IsDocumentation()) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
762 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
763 std::string m; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
764 if (!isRendered) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
765 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
766 switch (mode) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
767 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
768 case ImageExtractionMode_Preview: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
769 m = "preview"; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
770 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
771 case ImageExtractionMode_UInt8: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
772 m = "uint8"; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
773 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
774 case ImageExtractionMode_UInt16: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
775 m = "uint16"; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
776 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
777 case ImageExtractionMode_Int16: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
778 m = "int16"; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
779 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
780 default: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
781 throw OrthancException(ErrorCode_ParameterOutOfRange); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
782 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
783 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
784 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
785 std::string description; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
786 std::string verb = (isRendered ? "Render" : "Decode"); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
787 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
788 if (call.HasUriComponent("frame")) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
789 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
790 description = verb + " one frame of interest from the given DICOM instance."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
791 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
792 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
793 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
794 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
795 else |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
796 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
797 description = verb + " the first frame of the given DICOM instance."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
798 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
799 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
800 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
801 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
802 if (isRendered) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
803 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
804 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
805 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
806 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
807 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
808 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
809 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
810 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
811 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
812 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
813 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
814 else |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
815 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
816 switch (mode) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
817 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
818 case ImageExtractionMode_Preview: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
819 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
820 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
821 case ImageExtractionMode_UInt8: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
822 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
823 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
824 case ImageExtractionMode_UInt16: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
825 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
826 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
827 case ImageExtractionMode_Int16: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
828 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
829 "Negative values must be interpreted according to two's complement."); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
830 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
831 default: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
832 throw OrthancException(ErrorCode_ParameterOutOfRange); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
833 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
834 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
835 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
836 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
837 .SetTag("Instances") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
838 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
839 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
840 .SetHttpGetArgument("returnUnsupportedImage", RestApiCallDocumentation::Type_Boolean, "Returns an unsupported.png placeholder image if unable to provide the image instead of returning a 415 HTTP error (defaults to false)", false) |
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
841 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
842 .AddAnswerType(MimeType_Png, "PNG image") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
843 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
844 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
845 .SetDescription(description); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
846 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
847 return; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
848 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
849 |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
850 ServerContext& context = OrthancRestApi::GetContext(call); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
851 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
852 std::string frameId = call.GetUriComponent("frame", "0"); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
853 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
854 unsigned int frame; |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
855 try |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
856 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
857 frame = boost::lexical_cast<unsigned int>(frameId); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
858 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
859 catch (boost::bad_lexical_cast&) |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
860 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
861 return; |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
862 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
863 |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
864 std::unique_ptr<ImageAccessor> decoded; |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
865 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
866 try |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
867 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
868 std::string publicId = call.GetUriComponent("id", ""); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
869 |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
870 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
871 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
872 if (decoded.get() == NULL) |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
873 { |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
874 throw OrthancException(ErrorCode_NotImplemented, |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
875 "Cannot decode DICOM instance with ID: " + publicId); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
876 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
877 |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
878 if (handler.RequiresDicomTags()) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
879 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
880 /** |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
881 * Retrieve a summary of the DICOM tags, which is |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
882 * necessary to deal with MONOCHROME1 photometric |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
883 * interpretation, and with windowing parameters. |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
884 **/ |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
885 ServerContext::DicomCacheLocker locker(context, publicId); |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
886 handler.Handle(call, decoded, &locker.GetDicom(), frame); |
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
887 } |
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
888 else |
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
889 { |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
890 handler.Handle(call, decoded, NULL, frame); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
891 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
892 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
893 catch (OrthancException& e) |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
894 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
895 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
896 e.GetErrorCode() == ErrorCode_UnknownResource) |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
897 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
898 // The frame number is out of the range for this DICOM |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
899 // instance, the resource is not existent |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
900 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
901 else |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
902 { |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
903 if (call.HasArgument("returnUnsupportedImage")) |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
904 { |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
905 std::string root = ""; |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
906 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
907 { |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
908 root += "../"; |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
909 } |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
910 |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
911 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
912 } |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
913 else |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
914 { |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
915 call.GetOutput().SignalError(HttpStatus_415_UnsupportedMediaType); |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
916 } |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
917 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
918 return; |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
919 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
920 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
921 } |
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
922 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
923 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
924 static void DefaultHandler(RestApiGetCall& call, |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
925 std::unique_ptr<ImageAccessor>& decoded, |
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
926 ImageExtractionMode mode, |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
927 bool invert) |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
928 { |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
929 ImageToEncode image(decoded, mode, invert); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
930 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
931 HttpContentNegociation negociation; |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
932 EncodePng png(image); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
933 negociation.Register(MIME_PNG, png); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
934 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
935 EncodeJpeg jpeg(image, call); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
936 negociation.Register(MIME_JPEG, jpeg); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
937 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
938 EncodePam pam(image); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
939 negociation.Register(MIME_PAM, pam); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
940 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
941 if (negociation.Apply(call.GetHttpHeaders())) |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
942 { |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
943 image.Answer(call.GetOutput()); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
944 } |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
945 } |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
946 }; |
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
947 |
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
948 |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
949 class GetImageHandler : public IDecodedFrameHandler |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
950 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
951 private: |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
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952 ImageExtractionMode mode_; |
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953 |
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954 public: |
4205 | 955 explicit GetImageHandler(ImageExtractionMode mode) : |
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956 mode_(mode) |
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957 { |
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958 } |
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959 |
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960 virtual void Handle(RestApiGetCall& call, |
3712
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961 std::unique_ptr<ImageAccessor>& decoded, |
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962 const ParsedDicomFile* dicom, |
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963 unsigned int frame) ORTHANC_OVERRIDE |
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964 { |
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965 bool invert = false; |
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966 |
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967 if (mode_ == ImageExtractionMode_Preview) |
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968 { |
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969 if (dicom == NULL) |
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970 { |
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971 throw OrthancException(ErrorCode_InternalError); |
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972 } |
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973 |
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974 DicomMap tags; |
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975 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
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976 |
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977 DicomImageInformation info(tags); |
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978 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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979 } |
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980 |
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981 DefaultHandler(call, decoded, mode_, invert); |
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982 } |
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983 |
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984 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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985 { |
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986 return mode_ == ImageExtractionMode_Preview; |
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987 } |
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988 }; |
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989 |
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990 |
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991 class RenderedFrameHandler : public IDecodedFrameHandler |
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992 { |
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993 private: |
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994 static void GetUserArguments(double& windowWidth /* inout */, |
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995 double& windowCenter /* inout */, |
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996 unsigned int& argWidth, |
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997 unsigned int& argHeight, |
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998 bool& smooth, |
4205 | 999 const RestApiGetCall& call) |
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1000 { |
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1001 static const char* ARG_WINDOW_CENTER = "window-center"; |
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1002 static const char* ARG_WINDOW_WIDTH = "window-width"; |
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1003 static const char* ARG_WIDTH = "width"; |
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1004 static const char* ARG_HEIGHT = "height"; |
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1005 static const char* ARG_SMOOTH = "smooth"; |
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1006 |
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1007 if (call.HasArgument(ARG_WINDOW_WIDTH) && |
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1008 !SerializationToolbox::ParseDouble(windowWidth, call.GetArgument(ARG_WINDOW_WIDTH, ""))) |
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1009 { |
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1010 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1011 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
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1012 } |
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1013 |
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1014 if (call.HasArgument(ARG_WINDOW_CENTER) && |
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1015 !SerializationToolbox::ParseDouble(windowCenter, call.GetArgument(ARG_WINDOW_CENTER, ""))) |
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1016 { |
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1017 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1018 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
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1019 } |
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1020 |
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1021 argWidth = 0; |
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1022 argHeight = 0; |
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1023 |
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1024 if (call.HasArgument(ARG_WIDTH)) |
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1025 { |
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1026 try |
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1027 { |
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1028 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
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1029 if (tmp < 0) |
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1030 { |
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1031 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1032 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
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1033 } |
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1034 else |
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1035 { |
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1036 argWidth = static_cast<unsigned int>(tmp); |
3685
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1037 } |
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1038 } |
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1039 catch (boost::bad_lexical_cast&) |
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1040 { |
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1041 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1042 "Bad value for argument: " + std::string(ARG_WIDTH)); |
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1043 } |
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1044 } |
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1045 |
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1046 if (call.HasArgument(ARG_HEIGHT)) |
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1047 { |
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1048 try |
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1049 { |
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1050 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
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1051 if (tmp < 0) |
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1052 { |
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1053 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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|
1054 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
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1055 } |
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1056 else |
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changeset
|
1057 { |
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1058 argHeight = static_cast<unsigned int>(tmp); |
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1059 } |
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1060 } |
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changeset
|
1061 catch (boost::bad_lexical_cast&) |
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1062 { |
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1063 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1064 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
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1065 } |
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1066 } |
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1067 |
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1068 smooth = false; |
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1069 |
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1070 if (call.HasArgument(ARG_SMOOTH)) |
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1071 { |
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1072 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
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1073 } |
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1074 } |
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1075 |
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1076 |
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1077 public: |
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1078 virtual void Handle(RestApiGetCall& call, |
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1079 std::unique_ptr<ImageAccessor>& decoded, |
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1080 const ParsedDicomFile* dicom, |
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1081 unsigned int frame) ORTHANC_OVERRIDE |
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1082 { |
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1083 if (dicom == NULL) |
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1084 { |
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1085 throw OrthancException(ErrorCode_InternalError); |
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1086 } |
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1087 |
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1088 PhotometricInterpretation photometric; |
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1089 const bool invert = (dicom->LookupPhotometricInterpretation(photometric) && |
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1090 photometric == PhotometricInterpretation_Monochrome1); |
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1091 |
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1092 double rescaleIntercept, rescaleSlope, windowCenter, windowWidth; |
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1093 dicom->GetRescale(rescaleIntercept, rescaleSlope, frame); |
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1094 dicom->GetDefaultWindowing(windowCenter, windowWidth, frame); |
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1095 |
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1096 unsigned int argWidth, argHeight; |
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1097 bool smooth; |
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1098 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
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1099 |
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1100 unsigned int targetWidth = decoded->GetWidth(); |
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1101 unsigned int targetHeight = decoded->GetHeight(); |
3686 | 1102 |
1103 if (decoded->GetWidth() != 0 && | |
1104 decoded->GetHeight() != 0) | |
1105 { | |
1106 float ratio = 1; | |
1107 | |
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1108 if (argWidth != 0 && |
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1109 argHeight != 0) |
3686 | 1110 { |
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1111 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
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1112 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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1113 ratio = std::min(ratioX, ratioY); |
3686 | 1114 } |
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1115 else if (argWidth != 0) |
3686 | 1116 { |
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1117 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
3686 | 1118 } |
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1119 else if (argHeight != 0) |
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1120 { |
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1121 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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1122 } |
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1123 |
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1124 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
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1125 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
3686 | 1126 } |
1127 | |
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1128 if (decoded->GetFormat() == PixelFormat_RGB24 || decoded->GetFormat() == PixelFormat_RGB48) |
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1129 { |
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1130 if (targetWidth == decoded->GetWidth() && |
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1131 targetHeight == decoded->GetHeight()) |
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1132 { |
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1133 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
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1134 } |
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1135 else |
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1136 { |
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1137 std::unique_ptr<ImageAccessor> resized( |
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1138 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
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1139 |
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1140 if (smooth && |
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1141 (targetWidth < decoded->GetWidth() || |
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1142 targetHeight < decoded->GetHeight())) |
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1143 { |
4065
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1144 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
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1145 } |
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1146 |
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1147 ImageProcessing::Resize(*resized, *decoded); |
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1148 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
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1149 } |
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1150 } |
3686 | 1151 else |
1152 { | |
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1153 // Grayscale image: (1) convert to Float32, (2) apply |
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1154 // windowing to get a Grayscale8, (3) possibly resize |
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1155 |
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1156 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
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1157 ImageProcessing::Convert(converted, *decoded); |
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1158 |
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1159 // Avoid divisions by zero |
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1160 if (windowWidth <= 1.0f) |
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1161 { |
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1162 windowWidth = 1; |
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1163 } |
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1164 |
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1165 if (std::abs(rescaleSlope) <= 0.0001) |
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1166 { |
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1167 rescaleSlope = 0.0001; |
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1168 } |
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1169 |
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1170 const double scaling = 255.0 * rescaleSlope / windowWidth; |
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1171 const double offset = (rescaleIntercept - windowCenter + windowWidth / 2.0) / rescaleSlope; |
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1172 |
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1173 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
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1174 ImageProcessing::ShiftScale(*rescaled, converted, static_cast<float>(offset), static_cast<float>(scaling), false); |
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1175 |
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1176 if (targetWidth == decoded->GetWidth() && |
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1177 targetHeight == decoded->GetHeight()) |
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1178 { |
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1179 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
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1180 } |
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1181 else |
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1182 { |
3712
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1183 std::unique_ptr<ImageAccessor> resized( |
3690
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1184 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
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1185 |
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1186 if (smooth && |
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1187 (targetWidth < decoded->GetWidth() || |
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1188 targetHeight < decoded->GetHeight())) |
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1189 { |
4065
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1190 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
3690
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1191 } |
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1192 |
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1193 ImageProcessing::Resize(*resized, *rescaled); |
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1194 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
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1195 } |
3686 | 1196 } |
3683
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1197 } |
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1198 |
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1199 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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1200 { |
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1201 return true; |
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1202 } |
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1203 }; |
3600
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1204 } |
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1205 |
3683
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1206 |
751
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1207 template <enum ImageExtractionMode mode> |
974 | 1208 static void GetImage(RestApiGetCall& call) |
751
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1209 { |
3926
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1210 Semaphore::Locker locker(throttlingSemaphore_); |
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1211 |
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1212 GetImageHandler handler(mode); |
4406
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1213 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
3683
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1214 } |
1906
d7c1cb559431
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1215 |
1826
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1216 |
3683
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1217 static void GetRenderedFrame(RestApiGetCall& call) |
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1218 { |
3926
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1219 Semaphore::Locker locker(throttlingSemaphore_); |
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1220 |
3683
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1221 RenderedFrameHandler handler; |
4406
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1222 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
751
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|
1223 } |
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|
1224 |
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|
1225 |
4834
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1226 static void DocumentSharedNumpy(RestApiGetCall& call) |
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1227 { |
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1228 call.GetDocumentation() |
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1229 .SetUriArgument("id", "Orthanc identifier of the DICOM resource of interest") |
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1230 .SetHttpGetArgument("compress", RestApiCallDocumentation::Type_Boolean, "Compress the file as `.npz`", false) |
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1231 .SetHttpGetArgument("rescale", RestApiCallDocumentation::Type_Boolean, |
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1232 "On grayscale images, apply the rescaling and return floating-point values", false) |
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1233 .AddAnswerType(MimeType_PlainText, "Numpy file: https://numpy.org/devdocs/reference/generated/numpy.lib.format.html"); |
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1234 } |
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1235 |
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1236 |
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|
1237 namespace |
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1238 { |
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1239 class NumpyVisitor : public boost::noncopyable |
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1240 { |
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|
1241 private: |
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1242 bool rescale_; |
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1243 unsigned int depth_; |
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1244 unsigned int currentDepth_; |
4858 | 1245 unsigned int width_; |
4834
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1246 unsigned int height_; |
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|
1247 PixelFormat format_; |
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1248 ChunkedBuffer buffer_; |
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1249 |
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1250 public: |
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|
1251 NumpyVisitor(unsigned int depth /* can be zero if 2D frame */, |
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1252 bool rescale) : |
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|
1253 rescale_(rescale), |
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|
1254 depth_(depth), |
4858 | 1255 currentDepth_(0), |
1256 width_(0), // dummy initialization | |
1257 height_(0), // dummy initialization | |
1258 format_(PixelFormat_Grayscale8) // dummy initialization | |
4834
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1259 { |
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1260 } |
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1261 |
4858 | 1262 void WriteFrame(const ParsedDicomFile& dicom, |
4834
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1263 unsigned int frame) |
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1264 { |
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1265 std::unique_ptr<ImageAccessor> decoded(dicom.DecodeFrame(frame)); |
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1266 |
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1267 if (decoded.get() == NULL) |
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1268 { |
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1269 throw OrthancException(ErrorCode_NotImplemented, "Cannot decode DICOM instance"); |
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1270 } |
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|
1271 |
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|
1272 if (currentDepth_ == 0) |
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1273 { |
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1274 width_ = decoded->GetWidth(); |
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1275 height_ = decoded->GetHeight(); |
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1276 format_ = decoded->GetFormat(); |
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1277 } |
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1278 else if (width_ != decoded->GetWidth() || |
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|
1279 height_ != decoded->GetHeight()) |
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1280 { |
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1281 throw OrthancException(ErrorCode_IncompatibleImageSize, "The size of the frames varies across the instance(s)"); |
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1282 } |
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1283 else if (format_ != decoded->GetFormat()) |
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1284 { |
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1285 throw OrthancException(ErrorCode_IncompatibleImageFormat, "The pixel format of the frames varies across the instance(s)"); |
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1286 } |
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|
1287 |
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1288 if (rescale_ && |
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1289 decoded->GetFormat() != PixelFormat_RGB24) |
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1290 { |
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1291 if (currentDepth_ == 0) |
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1292 { |
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1293 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, PixelFormat_Float32); |
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1294 } |
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1295 |
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1296 double rescaleIntercept, rescaleSlope; |
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1297 dicom.GetRescale(rescaleIntercept, rescaleSlope, frame); |
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1298 |
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1299 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
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1300 ImageProcessing::Convert(converted, *decoded); |
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1301 ImageProcessing::ShiftScale2(converted, static_cast<float>(rescaleIntercept), static_cast<float>(rescaleSlope), false); |
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1302 |
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1303 NumpyWriter::WritePixels(buffer_, converted); |
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1304 } |
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1305 else |
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1306 { |
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1307 if (currentDepth_ == 0) |
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1308 { |
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1309 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, format_); |
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1310 } |
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1311 |
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1312 NumpyWriter::WritePixels(buffer_, *decoded); |
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1313 } |
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1314 |
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1315 currentDepth_ ++; |
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1316 } |
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1317 |
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1318 void Answer(RestApiOutput& output, |
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1319 bool compress) |
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1320 { |
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1321 if ((depth_ == 0 && currentDepth_ != 1) || |
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1322 (depth_ != 0 && currentDepth_ != depth_)) |
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1323 { |
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1324 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
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1325 } |
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1326 else |
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1327 { |
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1328 std::string answer; |
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1329 NumpyWriter::Finalize(answer, buffer_, compress); |
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1330 output.AnswerBuffer(answer, MimeType_Binary); |
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1331 } |
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1332 } |
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1333 }; |
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1334 } |
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1335 |
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1336 |
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1337 static void GetNumpyFrame(RestApiGetCall& call) |
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1338 { |
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1339 if (call.IsDocumentation()) |
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1340 { |
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1341 DocumentSharedNumpy(call); |
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1342 call.GetDocumentation() |
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1343 .SetTag("Instances") |
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1344 .SetSummary("Decode frame for numpy") |
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1345 .SetDescription("Decode one frame of interest from the given DICOM instance, for use with numpy in Python. " |
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1346 "The numpy array has 3 dimensions: (height, width, color channel).") |
4834
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1347 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
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1348 } |
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1349 else |
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1350 { |
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1351 const std::string instanceId = call.GetUriComponent("id", ""); |
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1352 const bool compress = call.GetBooleanArgument("compress", false); |
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1353 const bool rescale = call.GetBooleanArgument("rescale", true); |
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1354 |
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1355 uint32_t frame; |
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1356 if (!SerializationToolbox::ParseUnsignedInteger32(frame, call.GetUriComponent("frame", "0"))) |
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1357 { |
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|
1358 throw OrthancException(ErrorCode_ParameterOutOfRange, "Expected an unsigned integer for the \"frame\" argument"); |
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1359 } |
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|
1360 |
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1361 NumpyVisitor visitor(0 /* no depth, 2D frame */, rescale); |
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|
1362 |
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1363 { |
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1364 Semaphore::Locker throttling(throttlingSemaphore_); |
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|
1365 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
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1366 |
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1367 visitor.WriteFrame(locker.GetDicom(), frame); |
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1368 } |
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1369 |
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1370 visitor.Answer(call.GetOutput(), compress); |
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1371 } |
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1372 } |
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1373 |
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1374 |
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1375 static void GetNumpyInstance(RestApiGetCall& call) |
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1376 { |
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1377 if (call.IsDocumentation()) |
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1378 { |
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1379 DocumentSharedNumpy(call); |
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1380 call.GetDocumentation() |
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1381 .SetTag("Instances") |
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1382 .SetSummary("Decode instance for numpy") |
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1383 .SetDescription("Decode the given DICOM instance, for use with numpy in Python. " |
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1384 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
4834
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1385 } |
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1386 else |
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1387 { |
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1388 const std::string instanceId = call.GetUriComponent("id", ""); |
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1389 const bool compress = call.GetBooleanArgument("compress", false); |
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1390 const bool rescale = call.GetBooleanArgument("rescale", true); |
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1391 |
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1392 { |
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|
1393 Semaphore::Locker throttling(throttlingSemaphore_); |
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|
1394 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
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1395 |
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1396 const unsigned int depth = locker.GetDicom().GetFramesCount(); |
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1397 if (depth == 0) |
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1398 { |
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1399 throw OrthancException(ErrorCode_BadFileFormat, "Empty DICOM instance"); |
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1400 } |
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1401 |
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|
1402 NumpyVisitor visitor(depth, rescale); |
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1403 |
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1404 for (unsigned int frame = 0; frame < depth; frame++) |
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1405 { |
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1406 visitor.WriteFrame(locker.GetDicom(), frame); |
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1407 } |
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|
1408 |
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|
1409 visitor.Answer(call.GetOutput(), compress); |
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1410 } |
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1411 } |
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|
1412 } |
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download of numpy arrays from the REST API
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changeset
|
1413 |
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diff
changeset
|
1414 |
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diff
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|
1415 static void GetNumpySeries(RestApiGetCall& call) |
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1416 { |
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|
1417 if (call.IsDocumentation()) |
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|
1418 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1419 DocumentSharedNumpy(call); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1420 call.GetDocumentation() |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1421 .SetTag("Series") |
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|
1422 .SetSummary("Decode series for numpy") |
4836
ec1e9571b645
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Sebastien Jodogne <s.jodogne@gmail.com>
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4834
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|
1423 .SetDescription("Decode the given DICOM series, for use with numpy in Python. " |
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
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4834
diff
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|
1424 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
4834
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|
1425 } |
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|
1426 else |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1427 { |
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1428 const std::string seriesId = call.GetUriComponent("id", ""); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1429 const bool compress = call.GetBooleanArgument("compress", false); |
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diff
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|
1430 const bool rescale = call.GetBooleanArgument("rescale", true); |
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|
1431 |
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|
1432 Semaphore::Locker throttling(throttlingSemaphore_); |
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|
1433 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1434 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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download of numpy arrays from the REST API
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diff
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|
1435 SliceOrdering ordering(index, seriesId); |
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diff
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|
1436 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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1437 unsigned int depth = 0; |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1438 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
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|
1439 { |
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parents:
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diff
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|
1440 depth += ordering.GetFramesCount(i); |
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|
1441 } |
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changeset
|
1442 |
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changeset
|
1443 ServerContext& context = OrthancRestApi::GetContext(call); |
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|
1444 |
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|
1445 NumpyVisitor visitor(depth, rescale); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1446 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1447 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
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parents:
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diff
changeset
|
1448 { |
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parents:
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diff
changeset
|
1449 const std::string& instanceId = ordering.GetInstanceId(i); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1450 unsigned int framesCount = ordering.GetFramesCount(i); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1451 |
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1452 { |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1453 ServerContext::DicomCacheLocker locker(context, instanceId); |
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1454 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1455 for (unsigned int frame = 0; frame < framesCount; frame++) |
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1456 { |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1457 visitor.WriteFrame(locker.GetDicom(), frame); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1458 } |
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1459 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1460 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1461 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1462 visitor.Answer(call.GetOutput(), compress); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1463 } |
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1464 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1465 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1466 |
974 | 1467 static void GetMatlabImage(RestApiGetCall& call) |
874
87791ebc1f50
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diff
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|
1468 { |
4414 | 1469 if (call.IsDocumentation()) |
1470 { | |
1471 std::string description; | |
1472 | |
1473 if (call.HasUriComponent("frame")) | |
1474 { | |
1475 description = "Decode one frame of interest from the given DICOM instance"; | |
1476 call.GetDocumentation() | |
1477 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
1478 } | |
1479 else | |
1480 { | |
1481 description = "Decode the first frame of the given DICOM instance."; | |
1482 } | |
1483 | |
1484 call.GetDocumentation() | |
1485 .SetTag("Instances") | |
1486 .SetSummary("Decode frame for Matlab") | |
1487 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
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5427
diff
changeset
|
1488 "https://orthanc.uclouvain.be/book/faq/matlab.html") |
4414 | 1489 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
1490 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
1491 return; | |
1492 } | |
1493 | |
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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3816
diff
changeset
|
1494 Semaphore::Locker locker(throttlingSemaphore_); |
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1495 |
874
87791ebc1f50
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diff
changeset
|
1496 ServerContext& context = OrthancRestApi::GetContext(call); |
87791ebc1f50
download matlab images
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diff
changeset
|
1497 |
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1498 std::string frameId = call.GetUriComponent("frame", "0"); |
87791ebc1f50
download matlab images
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diff
changeset
|
1499 |
87791ebc1f50
download matlab images
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diff
changeset
|
1500 unsigned int frame; |
87791ebc1f50
download matlab images
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831
diff
changeset
|
1501 try |
87791ebc1f50
download matlab images
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831
diff
changeset
|
1502 { |
87791ebc1f50
download matlab images
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parents:
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diff
changeset
|
1503 frame = boost::lexical_cast<unsigned int>(frameId); |
87791ebc1f50
download matlab images
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831
diff
changeset
|
1504 } |
2836
7133ad478eea
fix Debian warnings
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parents:
2804
diff
changeset
|
1505 catch (boost::bad_lexical_cast&) |
874
87791ebc1f50
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diff
changeset
|
1506 { |
87791ebc1f50
download matlab images
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diff
changeset
|
1507 return; |
87791ebc1f50
download matlab images
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diff
changeset
|
1508 } |
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1509 |
87791ebc1f50
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diff
changeset
|
1510 std::string publicId = call.GetUriComponent("id", ""); |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1511 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
874
87791ebc1f50
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diff
changeset
|
1512 |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
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|
1513 if (decoded.get() == NULL) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
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|
1514 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
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|
1515 throw OrthancException(ErrorCode_NotImplemented, |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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|
1516 "Cannot decode DICOM instance with ID: " + publicId); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
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|
1517 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
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|
1518 else |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1519 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1520 std::string result; |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1521 decoded->ToMatlabString(result); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
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|
1522 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
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|
1523 } |
874
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diff
changeset
|
1524 } |
87791ebc1f50
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diff
changeset
|
1525 |
87791ebc1f50
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diff
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|
1526 |
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1527 template <bool GzipCompression> |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1528 static void GetRawFrame(RestApiGetCall& call) |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1529 { |
4408 | 1530 if (call.IsDocumentation()) |
1531 { | |
1532 call.GetDocumentation() | |
1533 .SetTag("Instances") | |
1534 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
1535 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
1536 "bypassing image decoding. This is notably useful to access the source files " | |
1537 "in compressed transfer syntaxes." + | |
1538 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
4424
83371ccdfe80
openapi documentation is now completed
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4422
diff
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|
1539 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
4408 | 1540 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
1541 | |
1542 if (GzipCompression) | |
1543 { | |
1544 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
1545 } | |
1546 else | |
1547 { | |
1548 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
1549 } | |
1550 return; | |
1551 } | |
1552 | |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1553 std::string frameId = call.GetUriComponent("frame", "0"); |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1554 |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1555 unsigned int frame; |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1556 try |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1557 { |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1558 frame = boost::lexical_cast<unsigned int>(frameId); |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1559 } |
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
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2804
diff
changeset
|
1560 catch (boost::bad_lexical_cast&) |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1561 { |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1562 return; |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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1563 } |
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1564 |
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1565 std::string publicId = call.GetUriComponent("id", ""); |
2908
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1566 std::string raw; |
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1567 MimeType mime; |
1924
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1568 |
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1569 { |
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1570 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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1571 locker.GetDicom().GetRawFrame(raw, mime, frame); |
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1572 } |
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1573 |
2408
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1574 if (GzipCompression) |
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1575 { |
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1576 GzipCompressor gzip; |
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1577 std::string compressed; |
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1578 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
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1579 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
2408
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1580 } |
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1581 else |
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1582 { |
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1583 call.GetOutput().AnswerBuffer(raw, mime); |
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1584 } |
1924
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1585 } |
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1586 |
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1587 |
974 | 1588 static void GetResourceStatistics(RestApiGetCall& call) |
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1589 { |
4418 | 1590 if (call.IsDocumentation()) |
1591 { | |
1592 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1593 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1594 call.GetDocumentation() | |
1595 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1596 .SetSummary("Get " + r + " statistics") | |
1597 .SetDescription("Get statistics about the given " + r) | |
1598 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1599 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
1600 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
1601 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
1602 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
1603 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
1604 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
1605 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
1606 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
1607 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
1608 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
1609 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
1610 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
1611 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
1612 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
1613 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
1614 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
1615 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
1616 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
1617 | |
1618 switch (t) | |
1619 { | |
1620 // Do NOT add "break" below this point! | |
1621 case ResourceType_Patient: | |
1622 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
1623 "Number of child studies within this " + r); | |
1624 | |
1625 case ResourceType_Study: | |
1626 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
1627 "Number of child series within this " + r); | |
1628 | |
1629 case ResourceType_Series: | |
1630 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
1631 "Number of child instances within this " + r); | |
1632 | |
1633 case ResourceType_Instance: | |
1634 default: | |
1635 break; | |
1636 } | |
1637 | |
1638 return; | |
1639 } | |
1640 | |
3174
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1641 static const uint64_t MEGA_BYTES = 1024 * 1024; |
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1642 |
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1643 std::string publicId = call.GetUriComponent("id", ""); |
3174
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1644 |
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1645 ResourceType type; |
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1646 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
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1647 unsigned int countStudies, countSeries, countInstances; |
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1648 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
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1649 type, diskSize, uncompressedSize, countStudies, countSeries, |
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1650 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
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1651 |
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1652 Json::Value result = Json::objectValue; |
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1653 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1654 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1655 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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1656 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
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1657 |
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1658 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
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1659 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1660 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
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1661 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
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1662 |
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1663 switch (type) |
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1664 { |
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1665 // Do NOT add "break" below this point! |
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1666 case ResourceType_Patient: |
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1667 result["CountStudies"] = countStudies; |
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1668 |
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1669 case ResourceType_Study: |
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1670 result["CountSeries"] = countSeries; |
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1671 |
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1672 case ResourceType_Series: |
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1673 result["CountInstances"] = countInstances; |
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1674 |
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1675 case ResourceType_Instance: |
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1676 default: |
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1677 break; |
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1678 } |
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1679 |
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1680 call.GetOutput().AnswerJson(result); |
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1681 } |
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1682 |
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1683 |
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1684 |
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1685 // Handling of metadata ----------------------------------------------------- |
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1686 |
4205 | 1687 static void CheckValidResourceType(const RestApiCall& call) |
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1688 { |
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1689 assert(!call.GetFullUri().empty()); |
4409 | 1690 const std::string resourceType = call.GetFullUri() [0]; |
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1691 StringToResourceType(resourceType.c_str()); |
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1692 } |
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1693 |
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1694 |
974 | 1695 static void ListMetadata(RestApiGetCall& call) |
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1696 { |
4414 | 1697 if (call.IsDocumentation()) |
1698 { | |
1699 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1700 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1701 call.GetDocumentation() | |
1702 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1703 .SetSummary("List metadata") | |
1704 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
1705 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1706 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
1707 "If present, also retrieve the value of the individual metadata", false) | |
5274
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1708 .SetHttpGetArgument("numeric", RestApiCallDocumentation::Type_String, |
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1709 "If present, use the numeric identifier of the metadata instead of its symbolic name", false) |
4414 | 1710 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " |
1711 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
1712 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
1713 return; | |
1714 } | |
1715 | |
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1716 assert(!call.GetFullUri().empty()); |
4554 | 1717 const std::string publicId = call.GetUriComponent("id", ""); |
1718 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
4551
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1719 |
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1720 typedef std::map<MetadataType, std::string> Metadata; |
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1721 |
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1722 Metadata metadata; |
4554 | 1723 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
2726
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1724 |
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new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1725 Json::Value result; |
751
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refactoring of OrthancRestApi
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diff
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|
1726 |
5274
e5b0bd6b2242
Added option "?numeric" if listing metadata
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diff
changeset
|
1727 bool isNumeric = call.HasArgument("numeric"); |
e5b0bd6b2242
Added option "?numeric" if listing metadata
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diff
changeset
|
1728 |
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
1729 if (call.HasArgument("expand") && call.GetBooleanArgument("expand", true)) |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1730 { |
2726
46061a91c88a
new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
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diff
changeset
|
1731 result = Json::objectValue; |
46061a91c88a
new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1732 |
4551
350a22c094f2
testing replay of transactions
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diff
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|
1733 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
2726
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new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1734 { |
5274
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Added option "?numeric" if listing metadata
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diff
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|
1735 std::string key; |
e5b0bd6b2242
Added option "?numeric" if listing metadata
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diff
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|
1736 if (isNumeric) |
e5b0bd6b2242
Added option "?numeric" if listing metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1737 { |
e5b0bd6b2242
Added option "?numeric" if listing metadata
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diff
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|
1738 key = boost::lexical_cast<std::string>(it->first); |
e5b0bd6b2242
Added option "?numeric" if listing metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1739 } |
e5b0bd6b2242
Added option "?numeric" if listing metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1740 else |
e5b0bd6b2242
Added option "?numeric" if listing metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1741 { |
e5b0bd6b2242
Added option "?numeric" if listing metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1742 key = EnumerationToString(it->first); |
e5b0bd6b2242
Added option "?numeric" if listing metadata
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|
1743 } |
e5b0bd6b2242
Added option "?numeric" if listing metadata
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|
1744 |
3187
4bbadcd03966
refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
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3174
diff
changeset
|
1745 result[key] = it->second; |
5274
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Added option "?numeric" if listing metadata
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diff
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|
1746 } |
2726
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1747 } |
46061a91c88a
new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1748 else |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1749 { |
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diff
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|
1750 result = Json::arrayValue; |
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|
1751 |
4551
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1752 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
2726
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new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
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diff
changeset
|
1753 { |
5274
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Added option "?numeric" if listing metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1754 if (isNumeric) |
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Added option "?numeric" if listing metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1755 { |
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Added option "?numeric" if listing metadata
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|
1756 result.append(it->first); |
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Added option "?numeric" if listing metadata
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|
1757 } |
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Added option "?numeric" if listing metadata
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|
1758 else |
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Added option "?numeric" if listing metadata
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|
1759 { |
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Added option "?numeric" if listing metadata
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|
1760 result.append(EnumerationToString(it->first)); |
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Added option "?numeric" if listing metadata
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|
1761 } |
2726
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|
1762 } |
751
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changeset
|
1763 } |
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changeset
|
1764 |
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diff
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|
1765 call.GetOutput().AnswerJson(result); |
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|
1766 } |
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changeset
|
1767 |
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|
1768 |
4657 | 1769 static void SetStringContentETag(const RestApiOutput& output, |
1770 int64_t revision, | |
1771 const std::string& value) | |
4640
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|
1772 { |
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|
1773 std::string md5; |
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|
1774 Toolbox::ComputeMD5(md5, value); |
66109d24d26e
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|
1775 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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|
1776 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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|
1777 } |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
1778 |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
1779 |
4657 | 1780 static void SetBufferContentETag(const RestApiOutput& output, |
4640
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|
1781 int64_t revision, |
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
1782 const void* data, |
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|
1783 size_t size) |
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|
1784 { |
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
1785 std::string md5; |
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
1786 Toolbox::ComputeMD5(md5, data, size); |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
1787 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
1788 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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|
1789 } |
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
1790 |
66109d24d26e
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|
1791 |
4657 | 1792 static void SetAttachmentETag(const RestApiOutput& output, |
4640
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|
1793 int64_t revision, |
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|
1794 const FileInfo& info) |
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|
1795 { |
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|
1796 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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|
1797 info.GetUncompressedMD5() + "\""); |
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|
1798 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1799 } |
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|
1800 |
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|
1801 |
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|
1802 static std::string GetMD5(const std::string& value) |
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1803 { |
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|
1804 std::string md5; |
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1805 Toolbox::ComputeMD5(md5, value); |
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1806 return md5; |
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1807 } |
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1808 |
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1809 |
4623
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|
1810 static bool GetRevisionHeader(int64_t& revision /* out */, |
4640
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|
1811 std::string& md5 /* out */, |
4623
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|
1812 const RestApiCall& call, |
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1813 const std::string& header) |
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1814 { |
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|
1815 std::string lower; |
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|
1816 Toolbox::ToLowerCase(lower, header); |
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|
1817 |
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1818 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1819 if (found == call.GetHttpHeaders().end()) |
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1820 { |
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1821 return false; |
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1822 } |
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|
1823 else |
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|
1824 { |
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|
1825 std::string value = Toolbox::StripSpaces(found->second); |
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|
1826 Toolbox::RemoveSurroundingQuotes(value); |
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1827 |
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|
1828 try |
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|
1829 { |
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|
1830 size_t comma = value.find('-'); |
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|
1831 if (comma != std::string::npos) |
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1832 { |
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|
1833 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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|
1834 md5 = value.substr(comma + 1); |
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1835 return true; |
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1836 } |
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1837 } |
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1838 catch (boost::bad_lexical_cast&) |
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1839 { |
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1840 } |
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1841 |
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1842 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1843 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
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1844 } |
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1845 } |
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1846 |
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1847 |
974 | 1848 static void GetMetadata(RestApiGetCall& call) |
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1849 { |
4414 | 1850 if (call.IsDocumentation()) |
1851 { | |
1852 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1853 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1854 call.GetDocumentation() | |
1855 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1856 .SetSummary("Get metadata") | |
1857 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
1858 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1859 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1860 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1861 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1862 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
4414 | 1863 return; |
1864 } | |
1865 | |
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1866 assert(!call.GetFullUri().empty()); |
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1867 const std::string publicId = call.GetUriComponent("id", ""); |
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1868 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1869 |
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1870 std::string name = call.GetUriComponent("name", ""); |
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1871 MetadataType metadata = StringToMetadata(name); |
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1872 |
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1873 std::string value; |
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1874 int64_t revision; |
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1875 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1876 { |
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1877 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
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1878 |
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1879 int64_t userRevision; |
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1880 std::string userMD5; |
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1881 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1882 userRevision == revision && |
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1883 userMD5 == GetMD5(value)) |
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1884 { |
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1885 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1886 } |
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1887 else |
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1888 { |
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1889 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1890 } |
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1891 } |
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1892 } |
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1893 |
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1894 |
974 | 1895 static void DeleteMetadata(RestApiDeleteCall& call) |
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1896 { |
4414 | 1897 if (call.IsDocumentation()) |
1898 { | |
1899 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1900 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1901 call.GetDocumentation() | |
1902 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1903 .SetSummary("Delete metadata") | |
1904 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
1905 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
1906 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
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1907 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
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1908 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
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1909 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
4414 | 1910 return; |
1911 } | |
1912 | |
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1913 CheckValidResourceType(call); |
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1914 const std::string publicId = call.GetUriComponent("id", ""); |
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1915 |
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1916 std::string name = call.GetUriComponent("name", ""); |
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1917 MetadataType metadata = StringToMetadata(name); |
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1918 |
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1919 if (IsUserMetadata(metadata) || // It is forbidden to delete internal metadata... |
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1920 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
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1921 { |
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1922 bool found; |
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1923 int64_t revision; |
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1924 std::string md5; |
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1925 if (GetRevisionHeader(revision, md5, call, "if-match")) |
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1926 { |
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1927 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
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1928 } |
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1929 else |
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1930 { |
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1931 OrthancConfiguration::ReaderLock lock; |
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1932 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1933 { |
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1934 throw OrthancException(ErrorCode_Revision, |
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1935 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
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1936 } |
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1937 else |
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1938 { |
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1939 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
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1940 } |
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1941 } |
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1942 |
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1943 if (found) |
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1944 { |
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1945 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1946 } |
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1947 else |
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1948 { |
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1949 throw OrthancException(ErrorCode_UnknownResource); |
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1950 } |
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1951 } |
2128
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1952 else |
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1953 { |
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1954 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1955 } |
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1956 } |
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1957 |
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1958 |
974 | 1959 static void SetMetadata(RestApiPutCall& call) |
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1960 { |
4414 | 1961 if (call.IsDocumentation()) |
1962 { | |
1963 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1964 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1965 call.GetDocumentation() | |
1966 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1967 .SetSummary("Set metadata") | |
1968 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
1969 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
1970 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1971 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1972 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
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1973 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
4414 | 1974 return; |
1975 } | |
1976 | |
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1977 CheckValidResourceType(call); |
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1978 |
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|
1979 std::string publicId = call.GetUriComponent("id", ""); |
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parents:
diff
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|
1980 std::string name = call.GetUriComponent("name", ""); |
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parents:
diff
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|
1981 MetadataType metadata = StringToMetadata(name); |
1446
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refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1982 |
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
1983 std::string value; |
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
1984 call.BodyToString(value); |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1985 |
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
1986 if (IsUserMetadata(metadata) || // It is forbidden to modify internal metadata... |
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
1987 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
1988 { |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
1989 int64_t oldRevision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
1990 std::string oldMD5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
1991 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
1992 |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
1993 if (!hasOldRevision) |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
1994 { |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
1995 OrthancConfiguration::ReaderLock lock; |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
1996 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
1997 { |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
1998 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
1999 // the actual value of "oldRevision" if the metadata is |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2000 // inexistent as expected |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2001 hasOldRevision = true; |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2002 oldRevision = -1; // dummy value |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2003 oldMD5.clear(); // dummy value |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2004 } |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2005 } |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2006 |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2007 int64_t newRevision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2008 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2009 hasOldRevision, oldRevision, oldMD5); |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2010 |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2011 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2012 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2013 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2014 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2015 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2016 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2017 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2018 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2019 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2020 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2021 |
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2022 // Handling of labels ------------------------------------------------------- |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2023 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2024 static void ListLabels(RestApiGetCall& call) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2025 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2026 if (call.IsDocumentation()) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2027 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2028 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2029 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2030 call.GetDocumentation() |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2031 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
5275
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
2032 .SetSummary("List labels") |
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
2033 .SetDescription("Get the labels that are associated with the given " + r + " (new in Orthanc 1.12.0)") |
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2034 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2035 .AddAnswerType(MimeType_Json, "JSON array containing the names of the labels") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2036 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/labels", true); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2037 return; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2038 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2039 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2040 assert(!call.GetFullUri().empty()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2041 const std::string publicId = call.GetUriComponent("id", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2042 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2043 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2044 std::set<std::string> labels; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2045 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2046 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2047 Json::Value result = Json::arrayValue; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2048 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2049 for (std::set<std::string>::const_iterator it = labels.begin(); it != labels.end(); ++it) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2050 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2051 result.append(*it); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2052 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2053 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2054 call.GetOutput().AnswerJson(result); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2055 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2056 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2057 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2058 static void GetLabel(RestApiGetCall& call) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2059 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2060 if (call.IsDocumentation()) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2061 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2062 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2063 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2064 call.GetDocumentation() |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2065 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2066 .SetSummary("Test label") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2067 .SetDescription("Test whether the " + r + " is associated with the given label") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2068 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2069 .SetUriArgument("label", "The label of interest") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2070 .AddAnswerType(MimeType_PlainText, "Empty string is returned in the case of presence, error 404 in the case of absence"); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2071 return; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2072 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2073 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2074 CheckValidResourceType(call); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2075 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2076 assert(!call.GetFullUri().empty()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2077 const std::string publicId = call.GetUriComponent("id", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2078 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2079 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2080 std::string label = call.GetUriComponent("label", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2081 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2082 std::set<std::string> labels; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2083 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2084 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2085 if (labels.find(label) != labels.end()) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2086 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2087 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2088 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2089 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2090 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2091 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2092 static void AddLabel(RestApiPutCall& call) |
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2093 { |
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2094 if (call.IsDocumentation()) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2095 { |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2096 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2097 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2098 call.GetDocumentation() |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2099 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
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5200
diff
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|
2100 .SetSummary("Add label") |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2101 .SetDescription("Associate a label with a " + r) |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2102 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2103 .SetUriArgument("label", "The label to be added"); |
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
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|
2104 return; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2105 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2106 |
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5200
diff
changeset
|
2107 CheckValidResourceType(call); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2108 |
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5200
diff
changeset
|
2109 std::string publicId = call.GetUriComponent("id", ""); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2110 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2111 |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
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changeset
|
2112 std::string label = call.GetUriComponent("label", ""); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2113 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Add); |
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5200
diff
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|
2114 |
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diff
changeset
|
2115 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2116 } |
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diff
changeset
|
2117 |
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diff
changeset
|
2118 |
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diff
changeset
|
2119 static void RemoveLabel(RestApiDeleteCall& call) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2120 { |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2121 if (call.IsDocumentation()) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2122 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2123 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2124 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2125 call.GetDocumentation() |
d0f7c742d397
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parents:
5200
diff
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|
2126 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
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|
2127 .SetSummary("Remove label") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2128 .SetDescription("Remove a label associated with a " + r) |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
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|
2129 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
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|
2130 .SetUriArgument("label", "The label to be removed"); |
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diff
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|
2131 return; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2132 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2133 |
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diff
changeset
|
2134 CheckValidResourceType(call); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2135 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2136 std::string publicId = call.GetUriComponent("id", ""); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2137 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2138 |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2139 std::string label = call.GetUriComponent("label", ""); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2140 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Remove); |
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diff
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|
2141 |
d0f7c742d397
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diff
changeset
|
2142 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2143 } |
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|
2144 |
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|
2145 |
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diff
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|
2146 // Handling of attached files ----------------------------------------------- |
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diff
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|
2147 |
974 | 2148 static void ListAttachments(RestApiGetCall& call) |
751
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diff
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|
2149 { |
4409 | 2150 if (call.IsDocumentation()) |
2151 { | |
2152 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2153 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2154 call.GetDocumentation() | |
2155 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2156 .SetSummary("List attachments") | |
2157 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
2158 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
4853
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Added links to download attachments from the Orthanc Explorer
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diff
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|
2159 .SetHttpGetArgument("full", RestApiCallDocumentation::Type_String, |
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diff
changeset
|
2160 "If present, retrieve the attachments list and their numerical ids", false) |
4409 | 2161 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") |
2162 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
2163 return; | |
2164 } | |
2165 | |
2166 const std::string resourceType = call.GetFullUri() [0]; | |
2167 const std::string publicId = call.GetUriComponent("id", ""); | |
4514
5b929e6b3c36
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4513
diff
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|
2168 std::set<FileContentType> attachments; |
751
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|
2169 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
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|
2170 |
4853
b3d0a3a4d890
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diff
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|
2171 Json::Value result; |
b3d0a3a4d890
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|
2172 |
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|
2173 if (call.HasArgument("full")) |
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2174 { |
4853
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2175 result = Json::objectValue; |
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|
2176 |
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|
2177 for (std::set<FileContentType>::const_iterator |
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2178 it = attachments.begin(); it != attachments.end(); ++it) |
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|
2179 { |
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diff
changeset
|
2180 std::string key = EnumerationToString(*it); |
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2181 result[key] = static_cast<uint16_t>(*it); |
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2182 } |
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|
2183 } |
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|
2184 else |
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|
2185 { |
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|
2186 result = Json::arrayValue; |
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|
2187 |
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2188 for (std::set<FileContentType>::const_iterator |
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2189 it = attachments.begin(); it != attachments.end(); ++it) |
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|
2190 { |
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2191 result.append(EnumerationToString(*it)); |
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2192 } |
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2193 } |
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|
2194 |
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2195 call.GetOutput().AnswerJson(result); |
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2196 } |
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2197 |
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2198 |
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2199 static void AddAttachmentDocumentation(RestApiGetCall& call, |
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2200 const std::string& resourceType) |
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2201 { |
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2202 call.GetDocumentation() |
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2203 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
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2204 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
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2205 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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2206 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
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2207 } |
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2208 |
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2209 |
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|
2210 static bool GetAttachmentInfo(FileInfo& info, |
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2211 RestApiGetCall& call) |
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2212 { |
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2213 CheckValidResourceType(call); |
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2214 |
4627
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2215 const std::string publicId = call.GetUriComponent("id", ""); |
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2216 const std::string name = call.GetUriComponent("name", ""); |
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2217 FileContentType contentType = StringToContentType(name); |
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2218 |
4627
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|
2219 int64_t revision; |
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2220 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2221 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2222 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
4627
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2223 |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2224 int64_t userRevision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
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|
2225 std::string userMD5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
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|
2226 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2227 revision == userRevision && |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2228 info.GetUncompressedMD5() == userMD5) |
4627
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2229 { |
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2230 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
f7d5372b59b3
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2231 return false; |
f7d5372b59b3
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|
2232 } |
f7d5372b59b3
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|
2233 else |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2234 { |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2235 return true; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2236 } |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2237 } |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2238 else |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2239 { |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
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|
2240 throw OrthancException(ErrorCode_UnknownResource); |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2241 } |
751
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2242 } |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2243 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2244 |
974 | 2245 static void GetAttachmentOperations(RestApiGetCall& call) |
751
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|
2246 { |
4409 | 2247 if (call.IsDocumentation()) |
2248 { | |
2249 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2250 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
f7d5372b59b3
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2251 AddAttachmentDocumentation(call, r); |
4409 | 2252 call.GetDocumentation() |
2253 .SetTag("Other") | |
4414 | 2254 .SetSummary("List operations on attachments") |
2255 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
4409 | 2256 .AddAnswerType(MimeType_Json, "List of the available operations") |
5432
59e3b6f8c5be
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Sebastien Jodogne <s.jodogne@gmail.com>
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2257 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/6582b1c0-292ad5ab-ba0f088f-f7a1766f-9a29a54f/attachments/dicom", true); |
4409 | 2258 return; |
2259 } | |
2260 | |
751
5197fd35333c
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|
2261 FileInfo info; |
5197fd35333c
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|
2262 if (GetAttachmentInfo(info, call)) |
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|
2263 { |
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|
2264 Json::Value operations = Json::arrayValue; |
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2265 |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
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2266 operations.append("compress"); |
751
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2267 operations.append("compressed-data"); |
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2268 |
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2269 if (info.GetCompressedMD5() != "") |
5197fd35333c
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|
2270 { |
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2271 operations.append("compressed-md5"); |
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2272 } |
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|
2273 |
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2274 operations.append("compressed-size"); |
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2275 operations.append("data"); |
4883
504624b0a062
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Alain Mazy <am@osimis.io>
parents:
4880
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|
2276 operations.append("info"); |
1700
f5ddbd9239dd
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2277 operations.append("is-compressed"); |
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2278 |
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2279 if (info.GetUncompressedMD5() != "") |
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2280 { |
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2281 operations.append("md5"); |
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2282 } |
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2283 |
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2284 operations.append("size"); |
1700
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2285 operations.append("uncompress"); |
751
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2286 |
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2287 if (info.GetCompressedMD5() != "" && |
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2288 info.GetUncompressedMD5() != "") |
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2289 { |
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2290 operations.append("verify-md5"); |
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2291 } |
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|
2292 |
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2293 call.GetOutput().AnswerJson(operations); |
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2294 } |
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2295 } |
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|
2296 |
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|
2297 |
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2298 template <int uncompress> |
974 | 2299 static void GetAttachmentData(RestApiGetCall& call) |
751
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2300 { |
4409 | 2301 if (call.IsDocumentation()) |
2302 { | |
2303 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2304 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2305 call.GetDocumentation() | |
2306 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2307 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
2308 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
4418 | 2309 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
4409 | 2310 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4414 | 2311 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
4627
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2312 .AddAnswerType(MimeType_Binary, "The attachment") |
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2313 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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2314 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
4409 | 2315 return; |
2316 } | |
2317 | |
751
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2318 ServerContext& context = OrthancRestApi::GetContext(call); |
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2319 |
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2320 CheckValidResourceType(call); |
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2321 |
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2322 std::string publicId = call.GetUriComponent("id", ""); |
1146
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1145
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2323 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
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2324 |
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2325 FileInfo info; |
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2326 if (GetAttachmentInfo(info, call)) |
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2327 { |
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2328 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
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2329 |
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2330 if (uncompress) |
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2331 { |
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2332 context.AnswerAttachment(call.GetOutput(), publicId, type); |
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2333 } |
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2334 else |
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2335 { |
4640
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2336 // Return the raw data (possibly compressed), as stored on the filesystem |
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2337 std::string content; |
5427 | 2338 std::string attachmentId; |
4640
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|
2339 int64_t revision; |
5427 | 2340 context.ReadAttachment(content, revision, attachmentId, publicId, type, false, true /* skipCache when you absolutely need the compressed data */); |
4640
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2341 |
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|
2342 int64_t userRevision; |
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2343 std::string userMD5; |
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2344 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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|
2345 revision == userRevision && |
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|
2346 info.GetUncompressedMD5() == userMD5) |
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2347 { |
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2348 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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2349 } |
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2350 else |
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2351 { |
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2352 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
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2353 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2354 } |
1146
200fcac0deb4
optimization for access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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1145
diff
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|
2355 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2356 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2357 |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2358 |
974 | 2359 static void GetAttachmentSize(RestApiGetCall& call) |
751
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|
2360 { |
4409 | 2361 if (call.IsDocumentation()) |
2362 { | |
2363 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2364 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
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|
2365 AddAttachmentDocumentation(call, r); |
4409 | 2366 call.GetDocumentation() |
2367 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2368 .SetSummary("Get size of attachment") | |
2369 .SetDescription("Get the size of one attachment associated with the given " + r) | |
2370 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
2371 return; | |
2372 } | |
2373 | |
751
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2374 FileInfo info; |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2375 if (GetAttachmentInfo(info, call)) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2376 { |
2908
9d277f8ad698
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2377 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
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|
2378 } |
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|
2379 } |
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|
2380 |
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2381 static void GetAttachmentInfo(RestApiGetCall& call) |
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|
2382 { |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
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|
2383 if (call.IsDocumentation()) |
504624b0a062
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Alain Mazy <am@osimis.io>
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diff
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|
2384 { |
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Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
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|
2385 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
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Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
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|
2386 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
504624b0a062
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Alain Mazy <am@osimis.io>
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diff
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|
2387 AddAttachmentDocumentation(call, r); |
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Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
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|
2388 call.GetDocumentation() |
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Alain Mazy <am@osimis.io>
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2389 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
504624b0a062
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Alain Mazy <am@osimis.io>
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|
2390 .SetSummary("Get info about the attachment") |
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Alain Mazy <am@osimis.io>
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2391 .SetDescription("Get all the information about the attachment associated with the given " + r) |
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Alain Mazy <am@osimis.io>
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|
2392 .AddAnswerType(MimeType_Json, "JSON object containing the information about the attachment") |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2393 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/attachments/dicom/info", true); |
4883
504624b0a062
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Alain Mazy <am@osimis.io>
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diff
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|
2394 return; |
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Alain Mazy <am@osimis.io>
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diff
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|
2395 } |
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Alain Mazy <am@osimis.io>
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|
2396 |
504624b0a062
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Alain Mazy <am@osimis.io>
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diff
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|
2397 FileInfo info; |
504624b0a062
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Alain Mazy <am@osimis.io>
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|
2398 if (GetAttachmentInfo(info, call)) |
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Alain Mazy <am@osimis.io>
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|
2399 { |
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Alain Mazy <am@osimis.io>
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|
2400 Json::Value result = Json::objectValue; |
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Alain Mazy <am@osimis.io>
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2401 result["Uuid"] = info.GetUuid(); |
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Alain Mazy <am@osimis.io>
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|
2402 result["ContentType"] = info.GetContentType(); |
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Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
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|
2403 result["UncompressedSize"] = Json::Value::UInt64(info.GetUncompressedSize()); |
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Alain Mazy <am@osimis.io>
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|
2404 result["CompressedSize"] = Json::Value::UInt64(info.GetCompressedSize()); |
504624b0a062
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Alain Mazy <am@osimis.io>
parents:
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|
2405 result["UncompressedMD5"] = info.GetUncompressedMD5(); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
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|
2406 result["CompressedMD5"] = info.GetCompressedMD5(); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
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|
2407 |
504624b0a062
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diff
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|
2408 call.GetOutput().AnswerJson(result); |
504624b0a062
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Alain Mazy <am@osimis.io>
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|
2409 } |
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|
2410 } |
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|
2411 |
974 | 2412 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
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|
2413 { |
4409 | 2414 if (call.IsDocumentation()) |
2415 { | |
2416 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2417 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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|
2418 AddAttachmentDocumentation(call, r); |
4409 | 2419 call.GetDocumentation() |
2420 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
4410 | 2421 .SetSummary("Get size of attachment on disk") |
4409 | 2422 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
4413 | 2423 "This is different from `.../size` iff `EnableStorage` is `true`.") |
4410 | 2424 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
4409 | 2425 return; |
2426 } | |
2427 | |
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|
2428 FileInfo info; |
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|
2429 if (GetAttachmentInfo(info, call)) |
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|
2430 { |
2908
9d277f8ad698
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|
2431 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
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2432 } |
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|
2433 } |
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|
2434 |
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|
2435 |
974 | 2436 static void GetAttachmentMD5(RestApiGetCall& call) |
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|
2437 { |
4410 | 2438 if (call.IsDocumentation()) |
2439 { | |
2440 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2441 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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|
2442 AddAttachmentDocumentation(call, r); |
4410 | 2443 call.GetDocumentation() |
2444 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2445 .SetSummary("Get MD5 of attachment") | |
2446 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
2447 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
2448 return; | |
2449 } | |
2450 | |
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|
2451 FileInfo info; |
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|
2452 if (GetAttachmentInfo(info, call) && |
5197fd35333c
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parents:
diff
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|
2453 info.GetUncompressedMD5() != "") |
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refactoring of OrthancRestApi
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|
2454 { |
2908
9d277f8ad698
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|
2455 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
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2456 } |
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|
2457 } |
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|
2458 |
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2459 |
974 | 2460 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
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2461 { |
4410 | 2462 if (call.IsDocumentation()) |
2463 { | |
2464 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2465 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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2466 AddAttachmentDocumentation(call, r); |
4410 | 2467 call.GetDocumentation() |
2468 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2469 .SetSummary("Get MD5 of attachment on disk") | |
2470 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
4413 | 2471 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
4410 | 2472 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
2473 return; | |
2474 } | |
2475 | |
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2476 FileInfo info; |
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2477 if (GetAttachmentInfo(info, call) && |
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2478 info.GetCompressedMD5() != "") |
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|
2479 { |
2908
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|
2480 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
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2481 } |
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|
2482 } |
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|
2483 |
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2484 |
974 | 2485 static void VerifyAttachment(RestApiPostCall& call) |
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2486 { |
4410 | 2487 if (call.IsDocumentation()) |
2488 { | |
2489 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2490 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2491 call.GetDocumentation() | |
2492 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2493 .SetSummary("Verify attachment") | |
2494 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
2495 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
4414 | 2496 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
4410 | 2497 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
2498 return; | |
2499 } | |
2500 | |
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2501 ServerContext& context = OrthancRestApi::GetContext(call); |
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|
2502 CheckValidResourceType(call); |
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|
2503 |
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2504 std::string publicId = call.GetUriComponent("id", ""); |
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2505 std::string name = call.GetUriComponent("name", ""); |
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|
2506 FileContentType contentType = StringToContentType(name); |
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|
2507 |
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|
2508 FileInfo info; |
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f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2509 int64_t revision; // Ignored |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2510 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2511 info.GetCompressedMD5() == "" || |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2512 info.GetUncompressedMD5() == "") |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2513 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2514 // Inexistent resource, or no MD5 available |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2515 return; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2516 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2517 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2518 bool ok = false; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2519 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2520 // First check whether the compressed data is correctly stored in the disk |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2521 std::string data; |
5427 | 2522 std::string attachmentId; |
2523 | |
2524 context.ReadAttachment(data, revision, attachmentId, publicId, StringToContentType(name), false, true /* skipCache when you absolutely need the compressed data */); | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2525 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2526 std::string actualMD5; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2527 Toolbox::ComputeMD5(actualMD5, data); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2528 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2529 if (actualMD5 == info.GetCompressedMD5()) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2530 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2531 // The compressed data is OK. If a compression algorithm was |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2532 // applied to it, now check the MD5 of the uncompressed data. |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2533 if (info.GetCompressionType() == CompressionType_None) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2534 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2535 ok = true; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2536 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2537 else |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2538 { |
5427 | 2539 context.ReadAttachment(data, revision, attachmentId, publicId, StringToContentType(name), true, true /* skipCache when you absolutely need the compressed data */); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2540 Toolbox::ComputeMD5(actualMD5, data); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2541 ok = (actualMD5 == info.GetUncompressedMD5()); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2542 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2543 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2544 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2545 if (ok) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2546 { |
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2547 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2548 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2549 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2550 else |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2551 { |
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2552 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2553 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2554 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2555 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2556 |
974 | 2557 static void UploadAttachment(RestApiPutCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2558 { |
4414 | 2559 if (call.IsDocumentation()) |
2560 { | |
2561 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2562 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2563 call.GetDocumentation() | |
2564 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2565 .SetSummary("Set attachment") | |
2566 .SetDescription("Attach a file to the given DICOM " + r + | |
2567 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
2568 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
2569 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
2570 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2571 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2572 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
4414 | 2573 return; |
2574 } | |
2575 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2576 ServerContext& context = OrthancRestApi::GetContext(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2577 CheckValidResourceType(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2578 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2579 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2580 std::string name = call.GetUriComponent("name", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2581 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2582 FileContentType contentType = StringToContentType(name); |
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2583 if (IsUserContentType(contentType) || // It is forbidden to modify internal attachments... |
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2584 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2585 { |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2586 int64_t oldRevision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2587 std::string oldMD5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2588 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2589 |
f7d5372b59b3
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parents:
4623
diff
changeset
|
2590 if (!hasOldRevision) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2591 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2592 OrthancConfiguration::ReaderLock lock; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2593 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2594 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2595 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2596 // the actual value of "oldRevision" if the metadata is |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2597 // inexistent as expected |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2598 hasOldRevision = true; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2599 oldRevision = -1; // dummy value |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2600 oldMD5.clear(); // dummy value |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2601 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2602 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2603 |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2604 int64_t newRevision; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2605 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2606 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2607 |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2608 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2609 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2610 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
changeset
|
2611 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2612 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2613 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
changeset
|
2614 } |
751
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
2615 } |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2616 |
5197fd35333c
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diff
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|
2617 |
974 | 2618 static void DeleteAttachment(RestApiDeleteCall& call) |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2619 { |
4413 | 2620 if (call.IsDocumentation()) |
2621 { | |
2622 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2623 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2624 call.GetDocumentation() | |
2625 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2626 .SetSummary("Delete attachment") | |
4414 | 2627 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
2628 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
4413 | 2629 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2630 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2631 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2632 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
4413 | 2633 return; |
2634 } | |
2635 | |
751
5197fd35333c
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diff
changeset
|
2636 CheckValidResourceType(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2637 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2638 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2639 std::string name = call.GetUriComponent("name", ""); |
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
2640 FileContentType contentType = StringToContentType(name); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2641 |
2128
9329ba17a069
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2127
diff
changeset
|
2642 bool allowed; |
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2643 if (IsUserContentType(contentType) || // It is forbidden to delete internal attachments... |
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2644 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
2128
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
changeset
|
2645 { |
9329ba17a069
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2127
diff
changeset
|
2646 allowed = true; |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2647 } |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2648 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2649 { |
2940
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2650 OrthancConfiguration::ReaderLock lock; |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2651 |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2652 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2653 contentType == FileContentType_DicomAsJson) |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2654 { |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2655 allowed = true; |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2656 } |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2657 else |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2658 { |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2659 // It is forbidden to delete internal attachments, except for |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2660 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2661 // would be automatically reconstructed on the next GET call) |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2662 allowed = false; |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2663 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2664 } |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2665 |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2666 if (allowed) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2667 { |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2668 bool found; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2669 int64_t revision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2670 std::string md5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2671 if (GetRevisionHeader(revision, md5, call, "if-match")) |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2672 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2673 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2674 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2675 else |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2676 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2677 OrthancConfiguration::ReaderLock lock; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2678 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2679 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2680 throw OrthancException(ErrorCode_Revision, |
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2681 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2682 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2683 else |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2684 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2685 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2686 false, -1 /* dummy value */, "" /* dummy value */); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2687 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2688 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2689 |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2690 if (found) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2691 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2692 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2693 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2694 else |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2695 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2696 throw OrthancException(ErrorCode_UnknownResource); |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2697 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2698 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2699 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2700 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2701 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2702 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2703 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2704 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2705 |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2706 template <enum CompressionType compression> |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2707 static void ChangeAttachmentCompression(RestApiPostCall& call) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2708 { |
4413 | 2709 if (call.IsDocumentation()) |
2710 { | |
2711 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2712 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2713 call.GetDocumentation() | |
2714 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2715 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
2716 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
2717 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
4414 | 2718 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
4413 | 2719 return; |
2720 } | |
2721 | |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2722 CheckValidResourceType(call); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2723 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2724 std::string publicId = call.GetUriComponent("id", ""); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2725 std::string name = call.GetUriComponent("name", ""); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2726 FileContentType contentType = StringToContentType(name); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2727 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2728 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2729 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2730 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2731 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2732 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2733 static void IsAttachmentCompressed(RestApiGetCall& call) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2734 { |
4413 | 2735 if (call.IsDocumentation()) |
2736 { | |
2737 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2738 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2739 AddAttachmentDocumentation(call, r); |
4413 | 2740 call.GetDocumentation() |
2741 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2742 .SetSummary("Is attachment compressed?") | |
2743 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
2744 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
2745 return; | |
2746 } | |
2747 | |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2748 FileInfo info; |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2749 if (GetAttachmentInfo(info, call)) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2750 { |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2751 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2752 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2753 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2754 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2755 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2756 |
782 | 2757 // Raw access to the DICOM tags of an instance ------------------------------ |
2758 | |
974 | 2759 static void GetRawContent(RestApiGetCall& call) |
782 | 2760 { |
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2761 if (call.IsDocumentation()) |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2762 { |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2763 call.GetDocumentation() |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2764 .SetTag("Instances") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2765 .SetSummary("Get raw tag") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2766 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2767 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
5393
c5c00bee291a
in openapi generator: renamed '...' into 'path' since '...' is an invalid name
Alain Mazy <am@osimis.io>
parents:
5392
diff
changeset
|
2768 .SetUriArgument("path", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2769 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2770 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2771 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2772 "or JSON array containing the list of available tags if accessing a dataset"); |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2773 return; |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2774 } |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2775 |
782 | 2776 std::string id = call.GetUriComponent("id", ""); |
2777 | |
2778 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
2779 | |
2780 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
2781 } | |
2782 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2783 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2784 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2785 static bool ExtractSharedTags(Json::Value& shared, |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2786 ServerContext& context, |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2787 const std::string& publicId) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2788 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2789 // Retrieve all the instances of this patient/study/series |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2790 typedef std::list<std::string> Instances; |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2791 Instances instances; |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2792 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2793 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2794 // Loop over the instances |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2795 bool isFirst = true; |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2796 shared = Json::objectValue; |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2797 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2798 for (Instances::const_iterator it = instances.begin(); |
1303 | 2799 it != instances.end(); ++it) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2800 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2801 // Get the tags of the current instance, in the simplified format |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2802 Json::Value tags; |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2803 |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2804 try |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2805 { |
2124 | 2806 context.ReadDicomAsJson(tags, *it); |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2807 } |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2808 catch (OrthancException&) |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2809 { |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2810 // Race condition: This instance has been removed since |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2811 // (*). Ignore this instance. |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2812 continue; |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2813 } |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2814 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2815 if (tags.type() != Json::objectValue) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2816 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2817 return false; // Error |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2818 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2819 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2820 // Only keep the tags that are mapped to a string |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2821 Json::Value::Members members = tags.getMemberNames(); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2822 for (size_t i = 0; i < members.size(); i++) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2823 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2824 const Json::Value& tag = tags[members[i]]; |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2825 if (tag.type() != Json::objectValue || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2826 tag["Type"].type() != Json::stringValue || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2827 tag["Type"].asString() != "String") |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2828 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2829 tags.removeMember(members[i]); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2830 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2831 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2832 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2833 if (isFirst) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2834 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2835 // This is the first instance, keep its tags as such |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2836 shared = tags; |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2837 isFirst = false; |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2838 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2839 else |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2840 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2841 // Loop over all the members of the shared tags extracted so |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2842 // far. If the value of one of these tags does not match its |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2843 // value in the current instance, remove it. |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2844 members = shared.getMemberNames(); |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2845 for (size_t i = 0; i < members.size(); i++) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2846 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2847 if (!tags.isMember(members[i]) || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2848 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2849 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2850 shared.removeMember(members[i]); |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2851 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2852 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2853 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2854 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2855 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2856 return true; |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2857 } |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2858 |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2859 |
974 | 2860 static void GetSharedTags(RestApiGetCall& call) |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2861 { |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2862 if (call.IsDocumentation()) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2863 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2864 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2865 |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2866 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2867 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2868 call.GetDocumentation() |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2869 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2870 .SetSummary("Get shared tags") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2871 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2872 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2873 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2874 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2875 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2876 return; |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2877 } |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2878 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2879 ServerContext& context = OrthancRestApi::GetContext(call); |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2880 std::string publicId = call.GetUriComponent("id", ""); |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2881 |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2882 Json::Value sharedTags; |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2883 if (ExtractSharedTags(sharedTags, context, publicId)) |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2884 { |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2885 // Success: Send the value of the shared tags |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2886 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2887 } |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2888 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2889 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2890 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2891 template <enum ResourceType resourceType, |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2892 enum DicomModule module> |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2893 static void GetModule(RestApiGetCall& call) |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2894 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2895 if (call.IsDocumentation()) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2896 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2897 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2898 std::string m; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2899 switch (module) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2900 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2901 case DicomModule_Patient: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2902 m = "patient"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2903 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2904 case DicomModule_Study: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2905 m = "study"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2906 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2907 case DicomModule_Series: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2908 m = "series"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2909 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2910 case DicomModule_Instance: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2911 m = "instance"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2912 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2913 default: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2914 throw OrthancException(ErrorCode_ParameterOutOfRange); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2915 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2916 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2917 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2918 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2919 call.GetDocumentation() |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2920 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2921 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2922 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2923 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2924 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2925 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2926 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2927 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2928 return; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2929 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2930 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2931 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2932 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2933 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2934 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2935 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2936 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2937 { |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2938 throw OrthancException(ErrorCode_NotImplemented); |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2939 } |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2940 |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2941 ServerContext& context = OrthancRestApi::GetContext(call); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2942 std::string publicId = call.GetUriComponent("id", ""); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2943 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2944 std::set<DicomTag> ignoreTagLength; |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2945 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2946 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2947 typedef std::set<DicomTag> ModuleTags; |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2948 ModuleTags moduleTags; |
1368 | 2949 DicomTag::AddTagsForModule(moduleTags, module); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2950 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2951 Json::Value tags; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2952 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2953 if (resourceType != ResourceType_Instance) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2954 { |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2955 // Retrieve all the instances of this patient/study/series |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2956 typedef std::list<std::string> Instances; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2957 Instances instances; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2958 context.GetIndex().GetChildInstances(instances, publicId); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2959 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2960 if (instances.empty()) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2961 { |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2962 return; // Error: No instance (should never happen) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2963 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2964 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2965 // Select one child instance |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2966 publicId = instances.front(); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2967 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2968 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2969 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2970 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2971 // Filter the tags of the instance according to the module |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2972 Json::Value result = Json::objectValue; |
1303 | 2973 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2974 { |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2975 std::string s = tag->Format(); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2976 if (tags.isMember(s)) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2977 { |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2978 result[s] = tags[s]; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2979 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2980 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2981 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2982 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2983 } |
81134ea872ff
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2984 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
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960
diff
changeset
|
2985 |
1722 | 2986 namespace |
2987 { | |
2988 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
2989 } | |
2990 | |
2991 | |
2992 static void AccumulateLookupResults(LookupResults& result, | |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2993 ServerIndex& index, |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2994 const DicomTag& tag, |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2995 const std::string& value, |
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2996 ResourceType level) |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2997 { |
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2998 std::vector<std::string> tmp; |
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
2999 index.LookupIdentifierExact(tmp, level, tag, value); |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3000 |
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
3001 for (size_t i = 0; i < tmp.size(); i++) |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3002 { |
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
3003 result.push_back(std::make_pair(level, tmp[i])); |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3004 } |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3005 } |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3006 |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3007 |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
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|
3008 static void Lookup(RestApiPostCall& call) |
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|
3009 { |
4422 | 3010 if (call.IsDocumentation()) |
3011 { | |
3012 call.GetDocumentation() | |
3013 .SetTag("System") | |
3014 .SetSummary("Look for DICOM identifiers") | |
3015 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
3016 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
3017 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
3018 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
3019 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
3020 "DICOM resource that is stored by Orthanc"); | |
3021 return; | |
3022 } | |
3023 | |
1446
8dc80ba768aa
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diff
changeset
|
3024 std::string tag; |
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|
3025 call.BodyToString(tag); |
1139
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|
3026 |
1722 | 3027 LookupResults resources; |
1718
2b812969e136
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parents:
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diff
changeset
|
3028 ServerIndex& index = OrthancRestApi::GetIndex(call); |
1719
3b1f7e706d38
fix Orthanc.test_lookup
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diff
changeset
|
3029 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
3b1f7e706d38
fix Orthanc.test_lookup
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diff
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|
3030 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
3b1f7e706d38
fix Orthanc.test_lookup
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diff
changeset
|
3031 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
3b1f7e706d38
fix Orthanc.test_lookup
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parents:
1718
diff
changeset
|
3032 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
1718
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diff
changeset
|
3033 |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
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diff
changeset
|
3034 Json::Value result = Json::arrayValue; |
1722 | 3035 for (LookupResults::const_iterator |
1718
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changeset
|
3036 it = resources.begin(); it != resources.end(); ++it) |
1139
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diff
changeset
|
3037 { |
f167b672db94
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diff
changeset
|
3038 ResourceType type = it->first; |
f167b672db94
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changeset
|
3039 const std::string& id = it->second; |
f167b672db94
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changeset
|
3040 |
f167b672db94
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diff
changeset
|
3041 Json::Value item = Json::objectValue; |
f167b672db94
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changeset
|
3042 item["Type"] = EnumerationToString(type); |
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|
3043 item["ID"] = id; |
f167b672db94
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1054
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|
3044 item["Path"] = GetBasePath(type, id); |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
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1054
diff
changeset
|
3045 |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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1054
diff
changeset
|
3046 result.append(item); |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
1054
diff
changeset
|
3047 } |
f167b672db94
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1054
diff
changeset
|
3048 |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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diff
changeset
|
3049 call.GetOutput().AnswerJson(result); |
f167b672db94
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diff
changeset
|
3050 } |
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diff
changeset
|
3051 |
f167b672db94
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1054
diff
changeset
|
3052 |
3001
7695a9c81099
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diff
changeset
|
3053 namespace |
7695a9c81099
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diff
changeset
|
3054 { |
3021
2cbafb5d5a62
renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
3055 class FindVisitor : public ServerContext::ILookupVisitor |
3001
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|
3056 { |
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refactoring /tools/find using LookupResource::IVisitor
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|
3057 private: |
7695a9c81099
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diff
changeset
|
3058 bool isComplete_; |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
changeset
|
3059 std::list<std::string> resources_; |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3060 FindStorageAccessMode findStorageAccessMode_; |
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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diff
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|
3061 |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3062 // cache the data we used during lookup and that we could reuse when building the answers |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
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|
3063 std::map<std::string, std::string> instancesIds_; // the id of an instance for each found resource. |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
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|
3064 std::map<std::string, boost::shared_ptr<DicomMap> > resourcesMainDicomTags_; // all tags read from DB for a resource (current level and upper levels) |
5060
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3065 std::map<std::string, boost::shared_ptr<Json::Value> > resourcesDicomAsJson_; // the dicom-as-json for a resource |
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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4936
diff
changeset
|
3066 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
3067 DicomToJsonFormat format_; |
3001
7695a9c81099
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diff
changeset
|
3068 |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
changeset
|
3069 public: |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3070 explicit FindVisitor(DicomToJsonFormat format, FindStorageAccessMode findStorageAccessMode) : |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
4694
diff
changeset
|
3071 isComplete_(false), |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3072 findStorageAccessMode_(findStorageAccessMode), |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3073 format_(format) |
3001
7695a9c81099
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diff
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|
3074 { |
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2998
diff
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|
3075 } |
4205 | 3076 |
3077 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3078 { |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3079 return false; // (*) |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3080 } |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3081 |
4205 | 3082 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
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|
3083 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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2998
diff
changeset
|
3084 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
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refactoring /tools/find using LookupResource::IVisitor
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|
3085 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
changeset
|
3086 |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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2998
diff
changeset
|
3087 virtual void Visit(const std::string& publicId, |
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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4936
diff
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|
3088 const std::string& instanceId, |
3f9b9865c8cc
include requested tags from storage if needed
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parents:
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diff
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|
3089 const DicomMap& mainDicomTags, |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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4936
diff
changeset
|
3090 const Json::Value* dicomAsJson) ORTHANC_OVERRIDE |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
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|
3091 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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2998
diff
changeset
|
3092 resources_.push_back(publicId); |
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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4936
diff
changeset
|
3093 instancesIds_[publicId] = instanceId; |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3094 resourcesMainDicomTags_[publicId].reset(mainDicomTags.Clone()); |
5060
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3095 if (dicomAsJson != NULL) |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3096 { |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3097 resourcesDicomAsJson_[publicId].reset(new Json::Value(*dicomAsJson)); // keep our own copy because we might reuse it between lookup and answers |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
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5058
diff
changeset
|
3098 } |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
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5058
diff
changeset
|
3099 else |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
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5058
diff
changeset
|
3100 { |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
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5058
diff
changeset
|
3101 resourcesDicomAsJson_[publicId] = boost::shared_ptr<Json::Value>(); |
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3102 } |
3001
7695a9c81099
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|
3103 } |
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diff
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|
3104 |
7695a9c81099
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diff
changeset
|
3105 void Answer(RestApiOutput& output, |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
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4902
diff
changeset
|
3106 ServerContext& context, |
3001
7695a9c81099
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diff
changeset
|
3107 ResourceType level, |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
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4935
diff
changeset
|
3108 bool expand, |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
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4935
diff
changeset
|
3109 const std::set<DicomTag>& requestedTags) const |
3001
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diff
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|
3110 { |
5058
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Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
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5054
diff
changeset
|
3111 AnswerListOfResources(output, context, resources_, instancesIds_, resourcesMainDicomTags_, resourcesDicomAsJson_, level, expand, format_, requestedTags, IsStorageAccessAllowedForAnswers(findStorageAccessMode_)); |
3001
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3112 } |
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refactoring /tools/find using LookupResource::IVisitor
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|
3113 }; |
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|
3114 } |
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|
3115 |
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|
3116 |
1354 | 3117 static void Find(RestApiPostCall& call) |
3118 { | |
2998 | 3119 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
3120 static const char* const KEY_EXPAND = "Expand"; | |
3121 static const char* const KEY_LEVEL = "Level"; | |
3122 static const char* const KEY_LIMIT = "Limit"; | |
3123 static const char* const KEY_QUERY = "Query"; | |
4935
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4902
diff
changeset
|
3124 static const char* const KEY_REQUESTED_TAGS = "RequestedTags"; |
2998 | 3125 static const char* const KEY_SINCE = "Since"; |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
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5227
diff
changeset
|
3126 static const char* const KEY_LABELS = "Labels"; // New in Orthanc 1.12.0 |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
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5227
diff
changeset
|
3127 static const char* const KEY_LABELS_CONSTRAINT = "LabelsConstraint"; // New in Orthanc 1.12.0 |
2998 | 3128 |
4421 | 3129 if (call.IsDocumentation()) |
3130 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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4694
diff
changeset
|
3131 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
569d9ef165b1
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diff
changeset
|
3132 |
4421 | 3133 call.GetDocumentation() |
3134 .SetTag("System") | |
3135 .SetSummary("Look for local resources") | |
3136 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
3137 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3138 "https://orthanc.uclouvain.be/book/users/rest.html#performing-finds-within-orthanc") |
4421 | 3139 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, |
3140 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
3141 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
3142 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
3143 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
3144 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
3145 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
3146 "Limit the number of reported resources", false) | |
3147 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
3148 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3149 .SetRequestField(KEY_REQUESTED_TAGS, RestApiCallDocumentation::Type_JsonListOfStrings, |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3150 "A list of DICOM tags to include in the response (applicable only if \"Expand\" is set to true). " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3151 "The tags requested tags are returned in the 'RequestedTags' field in the response. " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3152 "Note that, if you are requesting tags that are not listed in the Main Dicom Tags stored in DB, building the response " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3153 "might be slow since Orthanc will need to access the DICOM files. If not specified, Orthanc will return " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3154 "all Main Dicom Tags to keep backward compatibility with Orthanc prior to 1.11.0.", false) |
4421 | 3155 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, |
3156 "Associative array containing the filter on the values of the DICOM tags", true) | |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3157 .SetRequestField(KEY_LABELS, RestApiCallDocumentation::Type_JsonListOfStrings, |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3158 "List of strings specifying which labels to look for in the resources (new in Orthanc 1.12.0)", true) |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3159 .SetRequestField(KEY_LABELS_CONSTRAINT, RestApiCallDocumentation::Type_String, |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3160 "Constraint on the labels, can be `All`, `Any`, or `None` (defaults to `All`, new in Orthanc 1.12.0)", true) |
4421 | 3161 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
3162 "about the reported resources (if `Expand` argument is `true`)"); | |
3163 return; | |
3164 } | |
3165 | |
1358 | 3166 ServerContext& context = OrthancRestApi::GetContext(call); |
1354 | 3167 |
3168 Json::Value request; | |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3169 if (!call.ParseJsonRequest(request) || |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3170 request.type() != Json::objectValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3171 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3172 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3173 "The body must contain a JSON object"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3174 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3175 else if (!request.isMember(KEY_LEVEL) || |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3176 request[KEY_LEVEL].type() != Json::stringValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3177 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3178 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3179 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3180 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3181 else if (!request.isMember(KEY_QUERY) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3182 request[KEY_QUERY].type() != Json::objectValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3183 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3184 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3185 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3186 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3187 else if (request.isMember(KEY_CASE_SENSITIVE) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3188 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3189 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3190 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3191 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" must be a Boolean"); |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3192 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3193 else if (request.isMember(KEY_LIMIT) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3194 request[KEY_LIMIT].type() != Json::intValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3195 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3196 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3197 "Field \"" + std::string(KEY_LIMIT) + "\" must be an integer"); |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3198 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3199 else if (request.isMember(KEY_SINCE) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3200 request[KEY_SINCE].type() != Json::intValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3201 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3202 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3203 "Field \"" + std::string(KEY_SINCE) + "\" must be an integer"); |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3204 } |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3205 else if (request.isMember(KEY_REQUESTED_TAGS) && |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3206 request[KEY_REQUESTED_TAGS].type() != Json::arrayValue) |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3207 { |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3208 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3209 "Field \"" + std::string(KEY_REQUESTED_TAGS) + "\" must be an array"); |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3210 } |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3211 else if (request.isMember(KEY_LABELS) && |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3212 request[KEY_LABELS].type() != Json::arrayValue) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3213 { |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3214 throw OrthancException(ErrorCode_BadRequest, |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3215 "Field \"" + std::string(KEY_LABELS) + "\" must be an array of strings"); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3216 } |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3217 else if (request.isMember(KEY_LABELS_CONSTRAINT) && |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3218 request[KEY_LABELS_CONSTRAINT].type() != Json::stringValue) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3219 { |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3220 throw OrthancException(ErrorCode_BadRequest, |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3221 "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be an array of strings"); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3222 } |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3223 else |
1354 | 3224 { |
3225 bool expand = false; | |
2998 | 3226 if (request.isMember(KEY_EXPAND)) |
1354 | 3227 { |
2998 | 3228 expand = request[KEY_EXPAND].asBool(); |
1354 | 3229 } |
3230 | |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3231 bool caseSensitive = false; |
2998 | 3232 if (request.isMember(KEY_CASE_SENSITIVE)) |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3233 { |
2998 | 3234 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3235 } |
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3236 |
1758 | 3237 size_t limit = 0; |
2998 | 3238 if (request.isMember(KEY_LIMIT)) |
1758 | 3239 { |
2998 | 3240 int tmp = request[KEY_LIMIT].asInt(); |
1847 | 3241 if (tmp < 0) |
1758 | 3242 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3243 throw OrthancException(ErrorCode_ParameterOutOfRange, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3244 "Field \"" + std::string(KEY_LIMIT) + "\" must be a positive integer"); |
1758 | 3245 } |
1847 | 3246 |
3247 limit = static_cast<size_t>(tmp); | |
1758 | 3248 } |
3249 | |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3250 size_t since = 0; |
2998 | 3251 if (request.isMember(KEY_SINCE)) |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3252 { |
2998 | 3253 int tmp = request[KEY_SINCE].asInt(); |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3254 if (tmp < 0) |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3255 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3256 throw OrthancException(ErrorCode_ParameterOutOfRange, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3257 "Field \"" + std::string(KEY_SINCE) + "\" must be a positive integer"); |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3258 } |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3259 |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3260 since = static_cast<size_t>(tmp); |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3261 } |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3262 |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3263 std::set<DicomTag> requestedTags; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3264 |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3265 if (request.isMember(KEY_REQUESTED_TAGS)) |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3266 { |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3267 FromDcmtkBridge::ParseListOfTags(requestedTags, request[KEY_REQUESTED_TAGS]); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3268 } |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3269 |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3270 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
1360 | 3271 |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3272 DatabaseLookup query; |
1358 | 3273 |
2998 | 3274 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
1354 | 3275 for (size_t i = 0; i < members.size(); i++) |
3276 { | |
2998 | 3277 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
1354 | 3278 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3279 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3280 "Tag \"" + members[i] + "\" must be associated with a string"); |
1354 | 3281 } |
3282 | |
3163
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3283 const std::string value = request[KEY_QUERY][members[i]].asString(); |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3284 |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3285 if (!value.empty()) |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3286 { |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3287 // An empty string corresponds to an universal constraint, |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3288 // so we ignore it. This mimics the behavior of class |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3289 // "OrthancFindRequestHandler" |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3290 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3291 value, caseSensitive, true); |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3292 } |
1361
94ffb597d297
refactoring of C-Find SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1360
diff
changeset
|
3293 } |
2876 | 3294 |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3295 if (request.isMember(KEY_LABELS)) // New in Orthanc 1.12.0 |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3296 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3297 for (Json::Value::ArrayIndex i = 0; i < request[KEY_LABELS].size(); i++) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3298 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3299 if (request[KEY_LABELS][i].type() != Json::stringValue) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3300 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3301 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS) + "\" must contain strings"); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3302 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3303 else |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3304 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3305 query.AddLabel(request[KEY_LABELS][i].asString()); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3306 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3307 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3308 } |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3309 |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3310 query.SetLabelsConstraint(LabelsConstraint_All); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3311 |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3312 if (request.isMember(KEY_LABELS_CONSTRAINT)) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3313 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3314 const std::string& s = request[KEY_LABELS_CONSTRAINT].asString(); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3315 if (s == "All") |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3316 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3317 query.SetLabelsConstraint(LabelsConstraint_All); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3318 } |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3319 else if (s == "Any") |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3320 { |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3321 query.SetLabelsConstraint(LabelsConstraint_Any); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3322 } |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3323 else if (s == "None") |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3324 { |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3325 query.SetLabelsConstraint(LabelsConstraint_None); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3326 } |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3327 else |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3328 { |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3329 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be \"All\", \"Any\", or \"None\""); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3330 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3331 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3332 |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3333 FindVisitor visitor(OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human), context.GetFindStorageAccessMode()); |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3334 context.Apply(visitor, query, level, since, limit); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3335 visitor.Answer(call.GetOutput(), context, level, expand, requestedTags); |
1354 | 3336 } |
3337 } | |
3338 | |
3339 | |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3340 template <enum ResourceType start, |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3341 enum ResourceType end> |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3342 static void GetChildResources(RestApiGetCall& call) |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3343 { |
4415 | 3344 if (call.IsDocumentation()) |
3345 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3346 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3347 OrthancRestApi::DocumentRequestedTags(call); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3348 |
4415 | 3349 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
3350 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
3351 call.GetDocumentation() | |
3352 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
3353 .SetSummary("Get child " + children) | |
3354 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3355 resource + " whose Orthanc identifier is provided in the URL") |
4415 | 3356 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3357 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3358 "If false or missing, only retrieve the list of child " + children, false) |
4415 | 3359 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) |
3360 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
3361 return; | |
3362 } | |
3363 | |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3364 ServerIndex& index = OrthancRestApi::GetIndex(call); |
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3365 ServerContext& context = OrthancRestApi::GetContext(call); |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3366 |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3367 std::set<DicomTag> requestedTags; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3368 OrthancRestApi::GetRequestedTags(requestedTags, call); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3369 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3370 std::list<std::string> a, b, c; |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3371 a.push_back(call.GetUriComponent("id", "")); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3372 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3373 ResourceType type = start; |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3374 while (type != end) |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3375 { |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3376 b.clear(); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3377 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3378 for (std::list<std::string>::const_iterator |
1303 | 3379 it = a.begin(); it != a.end(); ++it) |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3380 { |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3381 index.GetChildren(c, *it); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3382 b.splice(b.begin(), c); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3383 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3384 |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3385 type = GetChildResourceType(type); |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3386 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3387 a.clear(); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3388 a.splice(a.begin(), b); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3389 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3390 |
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3391 AnswerListOfResources(call.GetOutput(), context, a, type, !call.HasArgument("expand") || call.GetBooleanArgument("expand", false), // this "expand" is the only one to have a false default value to keep backward compatibility |
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3392 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), |
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3393 requestedTags, |
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3394 true /* allowStorageAccess */); |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3395 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3396 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3397 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3398 static void GetChildInstancesTags(RestApiGetCall& call) |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3399 { |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3400 if (call.IsDocumentation()) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3401 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3402 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3403 |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3404 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3405 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3406 call.GetDocumentation() |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3407 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3408 .SetSummary("Get tags of instances") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3409 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3410 " whose Orthanc identifier is provided in the URL") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3411 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3412 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3413 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3414 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3415 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3416 return; |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3417 } |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3418 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3419 ServerContext& context = OrthancRestApi::GetContext(call); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3420 std::string publicId = call.GetUriComponent("id", ""); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3421 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3422 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3423 std::set<DicomTag> ignoreTagLength; |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3424 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3425 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3426 // Retrieve all the instances of this patient/study/series |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3427 typedef std::list<std::string> Instances; |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3428 Instances instances; |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3429 |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3430 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3431 |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3432 Json::Value result = Json::objectValue; |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3433 |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3434 for (Instances::const_iterator it = instances.begin(); |
1303 | 3435 it != instances.end(); ++it) |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3436 { |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3437 Json::Value full; |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3438 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3439 |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3440 if (format != DicomToJsonFormat_Full) |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3441 { |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3442 Json::Value simplified; |
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
3443 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3444 result[*it] = simplified; |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3445 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3446 else |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3447 { |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3448 result[*it] = full; |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3449 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3450 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3451 |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3452 call.GetOutput().AnswerJson(result); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3453 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3454 |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3455 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3456 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3457 template <enum ResourceType start, |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3458 enum ResourceType end> |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3459 static void GetParentResource(RestApiGetCall& call) |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3460 { |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3461 assert(start > end); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3462 |
4415 | 3463 if (call.IsDocumentation()) |
3464 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3465 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3466 OrthancRestApi::DocumentRequestedTags(call); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3467 |
4415 | 3468 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
3469 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
3470 call.GetDocumentation() | |
3471 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
3472 .SetSummary("Get parent " + parent) | |
3473 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3474 resource + " whose Orthanc identifier is provided in the URL") |
4415 | 3475 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
3476 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
3477 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
3478 return; | |
3479 } | |
3480 | |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3481 ServerIndex& index = OrthancRestApi::GetIndex(call); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3482 |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3483 std::set<DicomTag> requestedTags; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3484 OrthancRestApi::GetRequestedTags(requestedTags, call); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3485 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3486 std::string current = call.GetUriComponent("id", ""); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3487 ResourceType currentType = start; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3488 while (currentType > end) |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3489 { |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3490 std::string parent; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3491 if (!index.LookupParent(parent, current)) |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3492 { |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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parents:
1276
diff
changeset
|
3493 // Error that could happen if the resource gets deleted by |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3494 // another concurrent call |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3495 return; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3496 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3497 |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3498 current = parent; |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3499 currentType = GetParentResourceType(currentType); |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3500 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3501 |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3502 assert(currentType == end); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3503 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3504 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3505 |
4554 | 3506 Json::Value resource; |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3507 if (OrthancRestApi::GetContext(call).ExpandResource(resource, current, end, format, requestedTags, true /* allowStorageAccess */)) |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3508 { |
4554 | 3509 call.GetOutput().AnswerJson(resource); |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3510 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3511 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3512 |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3513 |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3514 static void ExtractPdf(RestApiGetCall& call) |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3515 { |
4407 | 3516 if (call.IsDocumentation()) |
3517 { | |
3518 call.GetDocumentation() | |
3519 .SetTag("Instances") | |
3520 .SetSummary("Get embedded PDF") | |
3521 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
3522 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
3523 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
3524 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
3525 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
3526 return; | |
3527 } | |
3528 | |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3529 const std::string id = call.GetUriComponent("id", ""); |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3530 std::string pdf; |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3531 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3532 |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3533 if (locker.GetDicom().ExtractPdf(pdf)) |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3534 { |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3535 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3536 return; |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3537 } |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3538 } |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3539 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3540 |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3541 static void OrderSlices(RestApiGetCall& call) |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3542 { |
4421 | 3543 if (call.IsDocumentation()) |
3544 { | |
3545 call.GetDocumentation() | |
3546 .SetDeprecated() | |
3547 .SetTag("Series") | |
3548 .SetSummary("Order the slices") | |
3549 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
3550 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
3551 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
3552 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
3553 "Ordered list of paths to DICOM instances") | |
3554 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
3555 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
3556 "in the case of multiframe images.") | |
3557 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
3558 "Same information as the `Slices` field, but in a compact form") | |
3559 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
3560 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3561 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); |
4421 | 3562 return; |
3563 } | |
3564 | |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3565 const std::string id = call.GetUriComponent("id", ""); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3566 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3567 ServerIndex& index = OrthancRestApi::GetIndex(call); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3568 SliceOrdering ordering(index, id); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3569 |
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3570 Json::Value result; |
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3571 ordering.Format(result); |
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3572 call.GetOutput().AnswerJson(result); |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3573 } |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3574 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3575 |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3576 static void GetInstanceHeader(RestApiGetCall& call) |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3577 { |
4404 | 3578 if (call.IsDocumentation()) |
3579 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3580 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
4404 | 3581 call.GetDocumentation() |
3582 .SetTag("Instances") | |
3583 .SetSummary("Get DICOM meta-header") | |
3584 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
3585 "combines hexadecimal tags with human-readable description.") | |
3586 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
3587 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3588 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); |
4404 | 3589 return; |
3590 } | |
3591 | |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3592 ServerContext& context = OrthancRestApi::GetContext(call); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3593 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3594 std::string publicId = call.GetUriComponent("id", ""); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3595 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3596 std::string dicomContent; |
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
3597 context.ReadDicomForHeader(dicomContent, publicId); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3598 |
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3599 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3600 // speed up things here |
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3601 |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3602 ParsedDicomFile dicom(dicomContent); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3603 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3604 Json::Value header; |
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3605 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3606 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3607 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3608 } |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3609 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3610 |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3611 static void InvalidateTags(RestApiPostCall& call) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3612 { |
4420 | 3613 if (call.IsDocumentation()) |
3614 { | |
3615 call.GetDocumentation() | |
3616 .SetTag("System") | |
3617 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
3618 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
3619 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
3620 "This is notably useful after changes to the `Dictionary` configuration option. " | |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3621 "https://orthanc.uclouvain.be/book/faq/orthanc-storage.html#storage-area"); |
4420 | 3622 return; |
3623 } | |
3624 | |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3625 ServerIndex& index = OrthancRestApi::GetIndex(call); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3626 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3627 // Loop over the instances, grouping them by parent studies so as |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3628 // to avoid large memory consumption |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3629 std::list<std::string> studies; |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3630 index.GetAllUuids(studies, ResourceType_Study); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3631 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3632 for (std::list<std::string>::const_iterator |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3633 study = studies.begin(); study != studies.end(); ++study) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3634 { |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3635 std::list<std::string> instances; |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3636 index.GetChildInstances(instances, *study); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3637 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3638 for (std::list<std::string>::const_iterator |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3639 instance = instances.begin(); instance != instances.end(); ++instance) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3640 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3641 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3642 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3643 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3644 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3645 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3646 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3647 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3648 |
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3649 void DocumentReconstructFilesField(RestApiPostCall& call, bool documentLimitField) |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3650 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3651 call.GetDocumentation() |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3652 .SetRequestField(RECONSTRUCT_FILES, RestApiCallDocumentation::Type_Boolean, |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3653 "Also reconstruct the files of the resources (e.g: apply IngestTranscoding, StorageCompression). " |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3654 "'false' by default. (New in Orthanc 1.11.0)", false); |
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3655 if (documentLimitField) |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3656 { |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3657 call.GetDocumentation() |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3658 .SetRequestField(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS, RestApiCallDocumentation::Type_Boolean, |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3659 "Only reconstruct this level MainDicomTags by re-reading them from a random child instance of the resource. " |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3660 "This option is much faster than a full reconstruct and is usefull e.g. if you have modified the " |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3661 "'ExtraMainDicomTags' at the Study level to optimize the speed of some C-Find. " |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3662 "'false' by default. (New in Orthanc 1.12.4)", false); |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3663 } |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3664 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3665 |
4994 | 3666 bool GetReconstructFilesField(const RestApiPostCall& call) |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3667 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3668 bool reconstructFiles = false; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3669 Json::Value request; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3670 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3671 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(RECONSTRUCT_FILES)) // allow "" payload to keep backward compatibility |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3672 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3673 if (!request[RECONSTRUCT_FILES].isBool()) |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3674 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3675 throw OrthancException(ErrorCode_BadFileFormat, |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3676 "The field " + std::string(RECONSTRUCT_FILES) + " must contain a Boolean"); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3677 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3678 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3679 reconstructFiles = request[RECONSTRUCT_FILES].asBool(); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3680 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3681 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3682 return reconstructFiles; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3683 } |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3684 |
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3685 bool GetLimitToThisLevelMainDicomTags(const RestApiPostCall& call) |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3686 { |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3687 bool limitToThisLevel = false; |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3688 Json::Value request; |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3689 |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3690 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS)) |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3691 { |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3692 if (!request[LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS].isBool()) |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3693 { |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3694 throw OrthancException(ErrorCode_BadFileFormat, |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3695 "The field " + std::string(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS) + " must contain a Boolean"); |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3696 } |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3697 |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3698 limitToThisLevel = request[LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS].asBool(); |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3699 } |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3700 |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3701 return limitToThisLevel; |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3702 } |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3703 |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3704 |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3705 template <enum ResourceType type> |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3706 static void ReconstructResource(RestApiPostCall& call) |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3707 { |
4420 | 3708 if (call.IsDocumentation()) |
3709 { | |
3710 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
3711 call.GetDocumentation() | |
3712 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3713 .SetSummary("Reconstruct tags & optionally files of " + resource) |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3714 .SetDescription("Reconstruct the main DICOM tags in DB of the " + resource + " whose Orthanc identifier is provided " |
4420 | 3715 "in the URL. This is useful if child studies/series/instances have inconsistent values for " |
3716 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
3717 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
3718 "parsed again, and the Orthanc index will be updated accordingly.") | |
3719 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3720 DocumentReconstructFilesField(call, true); |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3721 |
4420 | 3722 return; |
3723 } | |
3724 | |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3725 ServerContext& context = OrthancRestApi::GetContext(call); |
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3726 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", ""), GetReconstructFilesField(call), GetLimitToThisLevelMainDicomTags(call), type); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3727 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3728 } |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3729 |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3730 |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3731 static void ReconstructAllResources(RestApiPostCall& call) |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3732 { |
4420 | 3733 if (call.IsDocumentation()) |
3734 { | |
3735 call.GetDocumentation() | |
3736 .SetTag("System") | |
3737 .SetSummary("Reconstruct all the index") | |
3738 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
3739 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
3740 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3741 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated. " |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3742 "If you have a large database to process, it is advised to use the Housekeeper plugin to perform " |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3743 "this action resource by resource"); |
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3744 DocumentReconstructFilesField(call, false); |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3745 |
4420 | 3746 return; |
3747 } | |
3748 | |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3749 ServerContext& context = OrthancRestApi::GetContext(call); |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3750 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3751 std::list<std::string> studies; |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3752 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3753 bool reconstructFiles = GetReconstructFilesField(call); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3754 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3755 for (std::list<std::string>::const_iterator |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3756 study = studies.begin(); study != studies.end(); ++study) |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3757 { |
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3758 ServerToolbox::ReconstructResource(context, *study, reconstructFiles, false, ResourceType_Study /* dummy */); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3759 } |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3760 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3761 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3762 } |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3763 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3764 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3765 static void GetBulkChildren(std::set<std::string>& target, |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3766 ServerIndex& index, |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3767 const std::set<std::string>& source) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3768 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3769 target.clear(); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3770 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3771 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3772 it = source.begin(); it != source.end(); ++it) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3773 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3774 std::list<std::string> children; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3775 index.GetChildren(children, *it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3776 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3777 for (std::list<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3778 child = children.begin(); child != children.end(); ++child) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3779 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3780 target.insert(*child); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3781 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3782 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3783 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3784 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3785 |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3786 static void AddMetadata(Json::Value& target, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3787 ServerIndex& index, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3788 const std::string& resource, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3789 ResourceType level) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3790 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3791 target = Json::objectValue; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3792 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3793 std::map<MetadataType, std::string> content; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3794 index.GetAllMetadata(content, resource, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3795 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3796 for (std::map<MetadataType, std::string>::const_iterator |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3797 it = content.begin(); it != content.end(); ++it) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3798 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3799 target[EnumerationToString(it->first)] = it->second; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3800 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3801 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3802 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3803 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3804 static void BulkContent(RestApiPostCall& call) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3805 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3806 static const char* const LEVEL = "Level"; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3807 static const char* const METADATA = "Metadata"; |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3808 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3809 if (call.IsDocumentation()) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3810 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3811 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3812 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3813 call.GetDocumentation() |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3814 .SetTag("System") |
4879 | 3815 .SetSummary("Describe a set of resources") |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3816 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3817 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3818 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3819 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3820 "`Instance`). Orthanc will loop over the items inside `Resources`, and explore upward or " |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3821 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3822 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3823 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3824 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3825 "whose identifiers are provided in the `Resources` field, in one single call."); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3826 return; |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3827 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3828 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3829 Json::Value request; |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3830 if (!call.ParseJsonRequest(request) || |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3831 request.type() != Json::objectValue) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3832 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3833 throw OrthancException(ErrorCode_BadRequest, |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3834 "The body must contain a JSON object"); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3835 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3836 else |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3837 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3838 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3839 |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3840 bool metadata = true; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3841 if (request.isMember(METADATA)) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3842 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3843 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3844 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3845 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3846 ServerIndex& index = OrthancRestApi::GetIndex(call); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3847 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3848 Json::Value answer = Json::arrayValue; |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3849 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3850 if (request.isMember(LEVEL)) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3851 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3852 // Complex case: Need to explore the DICOM hierarchy |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3853 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3854 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3855 std::set<std::string> resources; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3856 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3857 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3858 std::set<std::string> interest; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3859 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3860 assert(ResourceType_Patient < ResourceType_Study && |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3861 ResourceType_Study < ResourceType_Series && |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3862 ResourceType_Series < ResourceType_Instance); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3863 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3864 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3865 it = resources.begin(); it != resources.end(); ++it) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3866 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3867 ResourceType type; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3868 if (index.LookupResourceType(type, *it)) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3869 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3870 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3871 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3872 // This resource is already from the level of interest |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3873 interest.insert(*it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3874 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3875 else if (type < level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3876 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3877 // Need to explore children |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3878 std::set<std::string> current; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3879 current.insert(*it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3880 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3881 for (;;) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3882 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3883 std::set<std::string> children; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3884 GetBulkChildren(children, index, current); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3885 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3886 type = GetChildResourceType(type); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3887 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3888 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3889 for (std::set<std::string>::const_iterator |
4716 | 3890 it2 = children.begin(); it2 != children.end(); ++it2) |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3891 { |
4716 | 3892 interest.insert(*it2); |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3893 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3894 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3895 break; // done |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3896 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3897 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3898 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3899 current.swap(children); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3900 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3901 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3902 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3903 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3904 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3905 // Need to explore parents |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3906 std::string current = *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3907 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3908 for (;;) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3909 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3910 std::string parent; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3911 if (index.LookupParent(parent, current)) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3912 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3913 type = GetParentResourceType(type); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3914 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3915 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3916 interest.insert(parent); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3917 break; // done |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3918 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3919 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3920 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3921 current = parent; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3922 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3923 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3924 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3925 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3926 break; // The resource has been deleted during the exploration |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3927 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3928 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3929 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3930 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3931 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3932 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3933 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3934 } |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3935 } |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3936 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3937 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3938 it = interest.begin(); it != interest.end(); ++it) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3939 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3940 Json::Value item; |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3941 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3942 |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3943 if (OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3944 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3945 if (metadata) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3946 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3947 AddMetadata(item[METADATA], index, *it, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3948 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3949 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3950 answer.append(item); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3951 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3952 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3953 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3954 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3955 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3956 // Simple case: We return the queried resources as such |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3957 std::list<std::string> resources; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3958 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3959 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3960 for (std::list<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3961 it = resources.begin(); it != resources.end(); ++it) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3962 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3963 ResourceType level; |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3964 Json::Value item; |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3965 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3966 |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3967 if (index.LookupResourceType(level, *it) && |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3968 OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3969 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3970 if (metadata) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3971 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3972 AddMetadata(item[METADATA], index, *it, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3973 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3974 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3975 answer.append(item); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3976 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3977 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3978 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3979 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3980 } |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3981 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3982 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3983 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3984 call.GetOutput().AnswerJson(answer); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3985 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3986 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3987 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3988 |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3989 static void BulkDelete(RestApiPostCall& call) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3990 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3991 if (call.IsDocumentation()) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3992 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3993 call.GetDocumentation() |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3994 .SetTag("System") |
4879 | 3995 .SetSummary("Delete a set of resources") |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3996 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3997 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3998 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3999 "whose identifiers are provided in the `Resources` field."); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4000 return; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4001 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4002 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4003 ServerContext& context = OrthancRestApi::GetContext(call); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4004 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4005 Json::Value request; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4006 if (!call.ParseJsonRequest(request) || |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4007 request.type() != Json::objectValue) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4008 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4009 throw OrthancException(ErrorCode_BadRequest, |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4010 "The body must contain a JSON object"); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4011 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4012 else |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4013 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4014 std::set<std::string> resources; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4015 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4016 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4017 for (std::set<std::string>::const_iterator |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4018 it = resources.begin(); it != resources.end(); ++it) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4019 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4020 ResourceType type; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4021 Json::Value remainingAncestor; // Unused |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4022 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4023 if (!context.GetIndex().LookupResourceType(type, *it) || |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4024 !context.DeleteResource(remainingAncestor, *it, type)) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4025 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4026 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4027 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4028 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4029 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4030 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4031 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4032 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4033 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4034 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4035 void OrthancRestApi::RegisterResources() |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4036 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4037 Register("/instances", ListResources<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4038 Register("/patients", ListResources<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4039 Register("/series", ListResources<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4040 Register("/studies", ListResources<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4041 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4042 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4043 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4044 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4045 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4046 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4047 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4048 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4049 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4050 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4051 Register("/instances/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4052 Register("/patients/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4053 Register("/studies/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4054 Register("/series/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4055 |
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4056 Register("/patients/{id}/shared-tags", GetSharedTags); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4057 Register("/series/{id}/shared-tags", GetSharedTags); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4058 Register("/studies/{id}/shared-tags", GetSharedTags); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
4059 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4060 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4061 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4062 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4063 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4064 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
4065 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4066 Register("/instances/{id}/file", GetInstanceFile); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4067 Register("/instances/{id}/export", ExportInstanceFile); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4068 Register("/instances/{id}/tags", GetInstanceTags); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4069 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4070 Register("/instances/{id}/frames", ListFrames); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4071 |
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
4072 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4073 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4074 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4075 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4076 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4077 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4078 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4079 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4080 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4081 Register("/instances/{id}/frames/{frame}/numpy", GetNumpyFrame); // New in Orthanc 1.10.0 |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
4082 Register("/instances/{id}/pdf", ExtractPdf); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4083 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4084 Register("/instances/{id}/rendered", GetRenderedFrame); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4085 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4086 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4087 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4088 Register("/instances/{id}/matlab", GetMatlabImage); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4089 Register("/instances/{id}/header", GetInstanceHeader); |
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4090 Register("/instances/{id}/numpy", GetNumpyInstance); // New in Orthanc 1.10.0 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4091 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4092 Register("/patients/{id}/protected", IsProtectedPatient); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4093 Register("/patients/{id}/protected", SetPatientProtection); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4094 |
4409 | 4095 std::vector<std::string> resourceTypes; |
4096 resourceTypes.push_back("patients"); | |
4097 resourceTypes.push_back("studies"); | |
4098 resourceTypes.push_back("series"); | |
4099 resourceTypes.push_back("instances"); | |
4100 | |
4101 for (size_t i = 0; i < resourceTypes.size(); i++) | |
4102 { | |
4103 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
4104 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
4105 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
4106 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4107 |
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4108 // New in Orthanc 1.12.0 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4109 Register("/" + resourceTypes[i] + "/{id}/labels", ListLabels); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4110 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", GetLabel); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4111 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", RemoveLabel); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4112 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", AddLabel); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4113 |
4409 | 4114 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
4115 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
4116 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
4117 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
4118 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
4119 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
4120 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
4121 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
4122 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
4123 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
4124 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
4125 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
4126 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
4127 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/info", GetAttachmentInfo); |
4409 | 4128 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); |
4129 } | |
782 | 4130 |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4131 Register("/tools/invalidate-tags", InvalidateTags); |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4132 Register("/tools/lookup", Lookup); |
1354 | 4133 Register("/tools/find", Find); |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4134 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4135 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4136 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4137 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4138 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4139 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4140 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4141 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4142 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4143 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4144 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4145 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4146 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4147 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4148 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4149 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4150 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4151 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4152 |
782 | 4153 Register("/instances/{id}/content/*", GetRawContent); |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4154 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4155 Register("/series/{id}/ordered-slices", OrderSlices); |
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4156 Register("/series/{id}/numpy", GetNumpySeries); // New in Orthanc 1.10.0 |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4157 |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4158 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4159 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4160 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4161 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4162 Register("/tools/reconstruct", ReconstructAllResources); |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4163 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4164 Register("/tools/bulk-content", BulkContent); |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4165 Register("/tools/bulk-delete", BulkDelete); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4166 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4167 } |