Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 4937:3f9b9865c8cc more-tags
include requested tags from storage if needed
| author | Alain Mazy <am@osimis.io> |
|---|---|
| date | Mon, 14 Mar 2022 13:13:29 +0100 |
| parents | 8422e4f99a18 |
| children | dad71e6da406 |
| rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2022 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU General Public License |
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "../PrecompiledHeadersServer.h" |
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24 #include "OrthancRestApi.h" |
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25 |
| 4045 | 26 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
| 27 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
| 28 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
| 29 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
| 30 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
| 31 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
| 32 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
| 33 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
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34 #include "../../../OrthancFramework/Sources/Images/NumpyWriter.h" |
| 4045 | 35 #include "../../../OrthancFramework/Sources/Logging.h" |
| 36 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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37 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
| 4045 | 38 |
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39 #include "../OrthancConfiguration.h" |
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40 #include "../Search/DatabaseLookup.h" |
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41 #include "../ServerContext.h" |
| 2131 | 42 #include "../ServerToolbox.h" |
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43 #include "../SliceOrdering.h" |
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44 |
| 3687 | 45 // This "include" is mandatory for Release builds using Linux Standard Base |
| 46 #include <boost/math/special_functions/round.hpp> | |
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47 #include <boost/shared_ptr.hpp> |
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48 |
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49 /** |
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50 * This semaphore is used to limit the number of concurrent HTTP |
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51 * requests on CPU-intensive routes of the REST API, in order to |
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52 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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53 **/ |
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54 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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55 |
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56 |
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57 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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58 |
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59 static const char* const IGNORE_LENGTH = "ignore-length"; |
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60 |
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61 |
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62 namespace Orthanc |
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63 { |
| 4415 | 64 static std::string GetDocumentationSampleResource(ResourceType type) |
| 65 { | |
| 66 switch (type) | |
| 67 { | |
| 68 case Orthanc::ResourceType_Instance: | |
| 69 return "https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2"; | |
| 70 break; | |
| 71 | |
| 72 case Orthanc::ResourceType_Series: | |
| 73 return "https://demo.orthanc-server.com/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; | |
| 74 break; | |
| 75 | |
| 76 case Orthanc::ResourceType_Study: | |
| 77 return "https://demo.orthanc-server.com/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; | |
| 78 break; | |
| 79 | |
| 80 case Orthanc::ResourceType_Patient: | |
| 81 return "https://demo.orthanc-server.com/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; | |
| 82 break; | |
| 83 | |
| 84 default: | |
| 85 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 86 } | |
| 87 } | |
| 88 | |
| 89 | |
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90 static void AnswerDicomAsJson(RestApiCall& call, |
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91 const Json::Value& dicom, |
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92 DicomToJsonFormat mode) |
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93 { |
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94 if (mode != DicomToJsonFormat_Full) |
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95 { |
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96 Json::Value simplified; |
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97 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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98 call.GetOutput().AnswerJson(simplified); |
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99 } |
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100 else |
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101 { |
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102 call.GetOutput().AnswerJson(dicom); |
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103 } |
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104 } |
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105 |
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106 |
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107 static void ParseSetOfTags(std::set<DicomTag>& target, |
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108 const RestApiGetCall& call, |
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109 const std::string& argument) |
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110 { |
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111 target.clear(); |
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112 |
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113 if (call.HasArgument(argument)) |
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114 { |
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115 std::vector<std::string> tags; |
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116 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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117 |
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118 for (size_t i = 0; i < tags.size(); i++) |
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119 { |
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120 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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121 } |
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122 } |
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123 } |
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124 |
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125 |
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126 // List all the patients, studies, series or instances ---------------------- |
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127 |
| 1354 | 128 static void AnswerListOfResources(RestApiOutput& output, |
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129 ServerContext& context, |
| 1354 | 130 const std::list<std::string>& resources, |
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131 const std::map<std::string, std::string>& instancesIds, // optional: the id of an instance for each found resource. |
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132 const std::map<std::string, boost::shared_ptr<DicomMap> >& resourcesMainDicomTags, // optional: all tags read from DB for a resource (current level and upper levels) |
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133 const std::map<std::string, Json::Value>& resourcesDicomAsJson, // optional: the dicom-as-json for each resource |
| 1354 | 134 ResourceType level, |
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135 bool expand, |
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136 DicomToJsonFormat format, |
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137 const std::set<DicomTag>& requestedTags) |
| 1354 | 138 { |
| 139 Json::Value answer = Json::arrayValue; | |
| 140 | |
| 141 for (std::list<std::string>::const_iterator | |
| 1384 | 142 resource = resources.begin(); resource != resources.end(); ++resource) |
| 1354 | 143 { |
| 144 if (expand) | |
| 145 { | |
| 4554 | 146 Json::Value expanded; |
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147 if (context.ExpandResource(expanded, *resource, level, format, requestedTags)) |
| 1354 | 148 { |
| 4554 | 149 answer.append(expanded); |
| 1354 | 150 } |
| 151 } | |
| 152 else | |
| 153 { | |
| 154 answer.append(*resource); | |
| 155 } | |
| 156 } | |
| 157 | |
| 158 output.AnswerJson(answer); | |
| 159 } | |
| 160 | |
| 161 | |
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162 static void AnswerListOfResources(RestApiOutput& output, |
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163 ServerContext& context, |
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164 const std::list<std::string>& resources, |
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165 ResourceType level, |
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166 bool expand, |
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167 DicomToJsonFormat format, |
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168 const std::set<DicomTag>& requestedTags) |
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169 { |
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170 std::map<std::string, std::string> unusedInstancesIds; |
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171 std::map<std::string, boost::shared_ptr<DicomMap> > unusedResourcesMainDicomTags; |
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172 std::map<std::string, Json::Value> unusedResourcesDicomAsJson; |
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173 |
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174 AnswerListOfResources(output, context, resources, unusedInstancesIds, unusedResourcesMainDicomTags, unusedResourcesDicomAsJson, level, expand, format, requestedTags); |
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175 } |
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176 |
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177 |
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178 template <enum ResourceType resourceType> |
| 974 | 179 static void ListResources(RestApiGetCall& call) |
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180 { |
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181 if (call.IsDocumentation()) |
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182 { |
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183 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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184 OrthancRestApi::DocumentRequestedTags(call); |
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185 |
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186 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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187 call.GetDocumentation() |
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188 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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189 .SetSummary("List the available " + resources) |
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190 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
| 4403 | 191 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
| 192 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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193 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
| 4403 | 194 "If present, retrieve detailed information about the individual " + resources, false) |
| 4404 | 195 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 196 "about the reported " + resources + " (if `expand` argument is provided)") | |
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197 .SetHttpGetSample("https://demo.orthanc-server.com/" + resources + "?since=0&limit=2", true); |
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198 return; |
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199 } |
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200 |
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201 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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202 ServerContext& context = OrthancRestApi::GetContext(call); |
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203 |
| 1354 | 204 std::list<std::string> result; |
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205 |
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206 std::set<DicomTag> requestedTags; |
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207 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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208 |
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209 if (call.HasArgument("limit") || |
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210 call.HasArgument("since")) |
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211 { |
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212 if (!call.HasArgument("limit")) |
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213 { |
| 2955 | 214 throw OrthancException(ErrorCode_BadRequest, |
| 215 "Missing \"limit\" argument for GET request against: " + | |
| 216 call.FlattenUri()); | |
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217 } |
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218 |
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219 if (!call.HasArgument("since")) |
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220 { |
| 2955 | 221 throw OrthancException(ErrorCode_BadRequest, |
| 222 "Missing \"since\" argument for GET request against: " + | |
| 223 call.FlattenUri()); | |
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224 } |
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225 |
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226 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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227 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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228 index.GetAllUuids(result, resourceType, since, limit); |
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229 } |
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230 else |
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231 { |
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232 index.GetAllUuids(result, resourceType); |
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233 } |
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234 |
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235 AnswerListOfResources(call.GetOutput(), context, result, resourceType, call.HasArgument("expand"), |
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236 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), |
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237 requestedTags); |
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238 } |
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239 |
| 4409 | 240 |
| 241 | |
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242 template <enum ResourceType resourceType> |
| 974 | 243 static void GetSingleResource(RestApiGetCall& call) |
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244 { |
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245 if (call.IsDocumentation()) |
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246 { |
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247 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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248 OrthancRestApi::DocumentRequestedTags(call); |
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249 |
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250 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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251 call.GetDocumentation() |
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252 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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253 .SetSummary("Get information about some " + resource) |
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254 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 255 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 4409 | 256 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
| 257 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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258 return; |
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259 } |
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260 |
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261 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
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262 |
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263 std::set<DicomTag> requestedTags; |
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264 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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265 |
| 4554 | 266 Json::Value json; |
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267 if (OrthancRestApi::GetContext(call).ExpandResource( |
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268 json, call.GetUriComponent("id", ""), resourceType, format, requestedTags)) |
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269 { |
| 4554 | 270 call.GetOutput().AnswerJson(json); |
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271 } |
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272 } |
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273 |
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274 template <enum ResourceType resourceType> |
| 974 | 275 static void DeleteSingleResource(RestApiDeleteCall& call) |
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276 { |
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277 if (call.IsDocumentation()) |
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278 { |
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279 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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280 call.GetDocumentation() |
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281 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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282 .SetSummary("Delete some " + resource) |
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283 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 284 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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285 return; |
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286 } |
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287 |
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288 Json::Value remainingAncestor; |
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289 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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290 { |
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291 call.GetOutput().AnswerJson(remainingAncestor); |
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292 } |
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293 } |
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294 |
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295 |
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296 // Get information about a single patient ----------------------------------- |
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297 |
| 974 | 298 static void IsProtectedPatient(RestApiGetCall& call) |
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299 { |
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300 if (call.IsDocumentation()) |
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301 { |
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302 call.GetDocumentation() |
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303 .SetTag("Patients") |
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304 .SetSummary("Is the patient protected against recycling?") |
| 4404 | 305 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
| 4403 | 306 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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307 return; |
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308 } |
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309 |
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310 std::string publicId = call.GetUriComponent("id", ""); |
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311 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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312 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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313 } |
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314 |
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315 |
| 974 | 316 static void SetPatientProtection(RestApiPutCall& call) |
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317 { |
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318 if (call.IsDocumentation()) |
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319 { |
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320 call.GetDocumentation() |
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321 .SetTag("Patients") |
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322 .SetSummary("Protect one patient against recycling") |
| 4403 | 323 .SetDescription("Check out configuration options `MaximumStorageSize` and `MaximumPatientCount`") |
| 4404 | 324 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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325 return; |
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326 } |
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327 |
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328 ServerContext& context = OrthancRestApi::GetContext(call); |
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329 |
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330 std::string publicId = call.GetUriComponent("id", ""); |
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331 |
|
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332 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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333 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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334 } |
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335 |
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336 |
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337 // Get information about a single instance ---------------------------------- |
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338 |
| 974 | 339 static void GetInstanceFile(RestApiGetCall& call) |
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340 { |
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341 if (call.IsDocumentation()) |
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342 { |
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343 call.GetDocumentation() |
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344 .SetTag("Instances") |
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345 .SetSummary("Download DICOM") |
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346 .SetDescription("Download one DICOM instance") |
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347 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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348 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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349 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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350 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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351 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
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352 return; |
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353 } |
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354 |
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355 ServerContext& context = OrthancRestApi::GetContext(call); |
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356 |
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357 std::string publicId = call.GetUriComponent("id", ""); |
|
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358 |
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359 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
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360 if (accept != call.GetHttpHeaders().end()) |
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361 { |
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362 // New in Orthanc 1.5.4 |
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363 try |
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364 { |
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365 MimeType mime = StringToMimeType(accept->second.c_str()); |
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366 |
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367 if (mime == MimeType_DicomWebJson || |
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368 mime == MimeType_DicomWebXml) |
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369 { |
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370 DicomWebJsonVisitor visitor; |
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371 |
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372 { |
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373 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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374 locker.GetDicom().Apply(visitor); |
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375 } |
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376 |
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377 if (mime == MimeType_DicomWebJson) |
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378 { |
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379 std::string s = visitor.GetResult().toStyledString(); |
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380 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
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381 } |
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382 else |
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383 { |
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384 std::string xml; |
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385 visitor.FormatXml(xml); |
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386 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
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387 } |
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388 |
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389 return; |
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390 } |
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391 } |
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392 catch (OrthancException&) |
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393 { |
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394 } |
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395 } |
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396 |
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397 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
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398 } |
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399 |
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400 |
| 974 | 401 static void ExportInstanceFile(RestApiPostCall& call) |
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402 { |
| 4421 | 403 if (call.IsDocumentation()) |
| 404 { | |
| 405 call.GetDocumentation() | |
| 406 .SetTag("Instances") | |
| 407 .SetSummary("Write DICOM onto filesystem") | |
| 408 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running") | |
| 409 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 410 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
| 411 return; | |
| 412 } | |
| 413 | |
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414 ServerContext& context = OrthancRestApi::GetContext(call); |
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415 |
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416 std::string publicId = call.GetUriComponent("id", ""); |
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417 |
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418 std::string dicom; |
| 2124 | 419 context.ReadDicom(dicom, publicId); |
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420 |
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421 std::string target; |
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422 call.BodyToString(target); |
| 2140 | 423 SystemToolbox::WriteFile(dicom, target); |
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424 |
|
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425 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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426 } |
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427 |
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428 |
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429 template <DicomToJsonFormat format> |
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430 static void GetInstanceTagsInternal(RestApiGetCall& call) |
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431 { |
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432 ServerContext& context = OrthancRestApi::GetContext(call); |
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433 |
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434 std::string publicId = call.GetUriComponent("id", ""); |
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435 |
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436 std::set<DicomTag> ignoreTagLength; |
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437 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
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438 |
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439 if (format != DicomToJsonFormat_Full || |
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440 !ignoreTagLength.empty()) |
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441 { |
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442 Json::Value full; |
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443 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
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444 AnswerDicomAsJson(call, full, format); |
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445 } |
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446 else |
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447 { |
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448 // This path allows one to avoid the JSON decoding if no |
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449 // simplification is asked, and if no "ignore-length" argument |
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450 // is present |
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451 Json::Value full; |
| 2127 | 452 context.ReadDicomAsJson(full, publicId); |
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453 call.GetOutput().AnswerJson(full); |
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454 } |
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455 } |
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456 |
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457 |
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458 static void GetInstanceTags(RestApiGetCall& call) |
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459 { |
| 4404 | 460 if (call.IsDocumentation()) |
| 461 { | |
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462 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 463 call.GetDocumentation() |
| 464 .SetTag("Instances") | |
| 465 .SetSummary("Get DICOM tags") | |
| 466 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
| 467 "combines hexadecimal tags with human-readable description.") | |
| 468 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
|
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469 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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470 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
| 4404 | 471 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
| 4415 | 472 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
| 4404 | 473 return; |
| 474 } | |
| 475 | |
|
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476 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
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477 { |
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478 case DicomToJsonFormat_Human: |
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479 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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480 break; |
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481 |
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482 case DicomToJsonFormat_Short: |
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483 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call); |
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484 break; |
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485 |
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486 case DicomToJsonFormat_Full: |
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487 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call); |
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488 break; |
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489 |
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490 default: |
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491 throw OrthancException(ErrorCode_InternalError); |
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492 } |
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493 } |
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494 |
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495 |
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496 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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497 { |
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498 if (call.IsDocumentation()) |
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499 { |
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500 call.GetDocumentation() |
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501 .SetTag("Instances") |
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502 .SetSummary("Get human-readable tags") |
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503 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
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504 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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505 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
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506 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
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507 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
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508 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
|
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509 return; |
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510 } |
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511 else |
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512 { |
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513 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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514 } |
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515 } |
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516 |
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517 |
| 974 | 518 static void ListFrames(RestApiGetCall& call) |
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519 { |
| 4414 | 520 if (call.IsDocumentation()) |
| 521 { | |
| 522 call.GetDocumentation() | |
| 523 .SetTag("Instances") | |
| 524 .SetSummary("List available frames") | |
| 525 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
| 526 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 527 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
| 528 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); | |
| 529 return; | |
| 530 } | |
| 531 | |
|
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532 std::string publicId = call.GetUriComponent("id", ""); |
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533 |
|
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534 unsigned int numberOfFrames; |
|
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535 |
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536 { |
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537 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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538 numberOfFrames = locker.GetDicom().GetFramesCount(); |
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539 } |
|
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540 |
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541 Json::Value result = Json::arrayValue; |
|
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542 for (unsigned int i = 0; i < numberOfFrames; i++) |
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543 { |
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544 result.append(i); |
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545 } |
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546 |
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547 call.GetOutput().AnswerJson(result); |
|
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548 } |
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549 |
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550 |
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551 namespace |
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552 { |
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553 class ImageToEncode |
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554 { |
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555 private: |
|
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556 std::unique_ptr<ImageAccessor>& image_; |
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557 ImageExtractionMode mode_; |
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558 bool invert_; |
|
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559 MimeType format_; |
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560 std::string answer_; |
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561 |
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562 public: |
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563 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
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564 ImageExtractionMode mode, |
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565 bool invert) : |
|
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566 image_(image), |
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567 mode_(mode), |
| 4205 | 568 invert_(invert), |
| 569 format_(MimeType_Binary) | |
|
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570 { |
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571 } |
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572 |
|
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573 void Answer(RestApiOutput& output) |
|
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574 { |
|
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575 output.AnswerBuffer(answer_, format_); |
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576 } |
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577 |
|
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578 void EncodeUsingPng() |
|
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579 { |
|
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580 format_ = MimeType_Png; |
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581 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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582 } |
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583 |
|
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584 void EncodeUsingPam() |
|
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585 { |
|
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586 format_ = MimeType_Pam; |
|
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587 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
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588 } |
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589 |
|
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590 void EncodeUsingJpeg(uint8_t quality) |
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591 { |
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592 format_ = MimeType_Jpeg; |
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593 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
|
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594 } |
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595 }; |
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596 |
|
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597 class EncodePng : public HttpContentNegociation::IHandler |
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598 { |
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599 private: |
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600 ImageToEncode& image_; |
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601 |
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602 public: |
| 4205 | 603 explicit EncodePng(ImageToEncode& image) : image_(image) |
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604 { |
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605 } |
|
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606 |
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607 virtual void Handle(const std::string& type, |
| 4205 | 608 const std::string& subtype) ORTHANC_OVERRIDE |
|
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609 { |
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610 assert(type == "image"); |
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611 assert(subtype == "png"); |
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612 image_.EncodeUsingPng(); |
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613 } |
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614 }; |
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615 |
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616 class EncodePam : public HttpContentNegociation::IHandler |
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617 { |
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618 private: |
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619 ImageToEncode& image_; |
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620 |
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621 public: |
| 4205 | 622 explicit EncodePam(ImageToEncode& image) : image_(image) |
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623 { |
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624 } |
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625 |
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626 virtual void Handle(const std::string& type, |
| 4205 | 627 const std::string& subtype) ORTHANC_OVERRIDE |
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628 { |
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629 assert(type == "image"); |
| 2780 | 630 assert(subtype == "x-portable-arbitrarymap"); |
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631 image_.EncodeUsingPam(); |
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632 } |
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633 }; |
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634 |
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635 class EncodeJpeg : public HttpContentNegociation::IHandler |
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636 { |
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637 private: |
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638 ImageToEncode& image_; |
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639 unsigned int quality_; |
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640 |
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641 public: |
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642 EncodeJpeg(ImageToEncode& image, |
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643 const RestApiGetCall& call) : |
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644 image_(image) |
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645 { |
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646 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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647 bool ok = false; |
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648 |
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649 try |
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650 { |
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651 quality_ = boost::lexical_cast<unsigned int>(v); |
| 1847 | 652 ok = (quality_ >= 1 && quality_ <= 100); |
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653 } |
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654 catch (boost::bad_lexical_cast&) |
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655 { |
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656 } |
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657 |
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658 if (!ok) |
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659 { |
| 2955 | 660 throw OrthancException( |
| 661 ErrorCode_BadRequest, | |
| 662 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
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663 } |
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664 } |
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665 |
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666 virtual void Handle(const std::string& type, |
| 4205 | 667 const std::string& subtype) ORTHANC_OVERRIDE |
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668 { |
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669 assert(type == "image"); |
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670 assert(subtype == "jpeg"); |
|
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671 image_.EncodeUsingJpeg(quality_); |
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672 } |
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673 }; |
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674 } |
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675 |
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676 |
|
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677 namespace |
|
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678 { |
|
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679 class IDecodedFrameHandler : public boost::noncopyable |
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680 { |
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681 public: |
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682 virtual ~IDecodedFrameHandler() |
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683 { |
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684 } |
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685 |
|
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686 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
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687 virtual void Handle(RestApiGetCall& call, |
|
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688 std::unique_ptr<ImageAccessor>& decoded, |
|
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689 const ParsedDicomFile* dicom, |
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690 unsigned int frame) = 0; |
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691 |
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692 virtual bool RequiresDicomTags() const = 0; |
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693 |
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694 static void Apply(RestApiGetCall& call, |
|
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695 IDecodedFrameHandler& handler, |
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696 ImageExtractionMode mode /* for generation of documentation */, |
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697 bool isRendered /* for generation of documentation */) |
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698 { |
|
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699 if (call.IsDocumentation()) |
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700 { |
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701 std::string m; |
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702 if (!isRendered) |
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703 { |
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704 switch (mode) |
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705 { |
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706 case ImageExtractionMode_Preview: |
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707 m = "preview"; |
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708 break; |
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709 case ImageExtractionMode_UInt8: |
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710 m = "uint8"; |
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711 break; |
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712 case ImageExtractionMode_UInt16: |
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713 m = "uint16"; |
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714 break; |
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715 case ImageExtractionMode_Int16: |
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716 m = "int16"; |
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717 break; |
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718 default: |
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719 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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720 } |
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721 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
722 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
723 std::string description; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
724 std::string verb = (isRendered ? "Render" : "Decode"); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
725 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
726 if (call.HasUriComponent("frame")) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
727 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
728 description = verb + " one frame of interest from the given DICOM instance."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
729 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
730 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
731 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
732 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
733 else |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
734 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
735 description = verb + " the first frame of the given DICOM instance."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
736 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
737 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
738 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
739 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
740 if (isRendered) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
741 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
742 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
743 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
744 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
745 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
746 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
747 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
748 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
749 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
750 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
751 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
752 else |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
753 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
754 switch (mode) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
755 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
756 case ImageExtractionMode_Preview: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
757 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
758 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
759 case ImageExtractionMode_UInt8: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
760 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
761 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
762 case ImageExtractionMode_UInt16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
763 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
764 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
765 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
766 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
767 "Negative values must be interpreted according to two's complement."); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
768 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
769 default: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
770 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
771 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
772 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
773 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
774 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
775 .SetTag("Instances") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
776 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
777 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
778 .SetHttpGetArgument("returnUnsupportedImage", RestApiCallDocumentation::Type_Boolean, "Returns an unsupported.png placeholder image if unable to provide the image instead of returning a 415 HTTP error (defaults to false)", false) |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
779 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
780 .AddAnswerType(MimeType_Png, "PNG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
781 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
782 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
783 .SetDescription(description); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
784 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
785 return; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
786 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
787 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
788 ServerContext& context = OrthancRestApi::GetContext(call); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
789 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
790 std::string frameId = call.GetUriComponent("frame", "0"); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
791 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
792 unsigned int frame; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
793 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
794 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
795 frame = boost::lexical_cast<unsigned int>(frameId); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
796 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
797 catch (boost::bad_lexical_cast&) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
798 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
799 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
800 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
801 |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
802 std::unique_ptr<ImageAccessor> decoded; |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
803 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
804 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
805 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
806 std::string publicId = call.GetUriComponent("id", ""); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
807 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
808 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
809 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
810 if (decoded.get() == NULL) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
811 { |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
812 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
813 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
814 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
815 |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
816 if (handler.RequiresDicomTags()) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
817 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
818 /** |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
819 * Retrieve a summary of the DICOM tags, which is |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
820 * necessary to deal with MONOCHROME1 photometric |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
821 * interpretation, and with windowing parameters. |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
822 **/ |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
823 ServerContext::DicomCacheLocker locker(context, publicId); |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
824 handler.Handle(call, decoded, &locker.GetDicom(), frame); |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
825 } |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
826 else |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
827 { |
|
4777
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Support detection of windowing and rescale in Philips multiframe images
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4769
diff
changeset
|
828 handler.Handle(call, decoded, NULL, frame); |
|
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diff
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|
829 } |
|
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diff
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|
830 } |
|
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parents:
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diff
changeset
|
831 catch (OrthancException& e) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
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|
832 { |
|
12253ddefe5a
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changeset
|
833 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
|
12253ddefe5a
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diff
changeset
|
834 e.GetErrorCode() == ErrorCode_UnknownResource) |
|
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|
835 { |
|
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diff
changeset
|
836 // The frame number is out of the range for this DICOM |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
837 // instance, the resource is not existent |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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|
838 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
839 else |
|
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diff
changeset
|
840 { |
|
4804
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new option returnUnsupportedImage for /preview & /rendered routes
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diff
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|
841 if (call.HasArgument("returnUnsupportedImage")) |
|
3683
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|
842 { |
|
4804
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new option returnUnsupportedImage for /preview & /rendered routes
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|
843 std::string root = ""; |
|
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4777
diff
changeset
|
844 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
|
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new option returnUnsupportedImage for /preview & /rendered routes
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|
845 { |
|
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diff
changeset
|
846 root += "../"; |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
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4777
diff
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|
847 } |
|
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Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
848 |
|
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diff
changeset
|
849 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
|
3683
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diff
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|
850 } |
|
4804
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new option returnUnsupportedImage for /preview & /rendered routes
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parents:
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diff
changeset
|
851 else |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
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parents:
4777
diff
changeset
|
852 { |
|
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Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
853 call.GetOutput().SignalError(HttpStatus_415_UnsupportedMediaType); |
|
ae643f664628
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parents:
4777
diff
changeset
|
854 } |
|
3683
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skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
855 } |
|
12253ddefe5a
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3640
diff
changeset
|
856 return; |
|
12253ddefe5a
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parents:
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diff
changeset
|
857 } |
|
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parents:
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diff
changeset
|
858 |
|
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diff
changeset
|
859 } |
|
3685
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3683
diff
changeset
|
860 |
|
2cc34837d694
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3683
diff
changeset
|
861 |
|
2cc34837d694
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3683
diff
changeset
|
862 static void DefaultHandler(RestApiGetCall& call, |
|
3712
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
863 std::unique_ptr<ImageAccessor>& decoded, |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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3683
diff
changeset
|
864 ImageExtractionMode mode, |
|
2cc34837d694
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
865 bool invert) |
|
2cc34837d694
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diff
changeset
|
866 { |
|
2cc34837d694
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parents:
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diff
changeset
|
867 ImageToEncode image(decoded, mode, invert); |
|
2cc34837d694
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diff
changeset
|
868 |
|
2cc34837d694
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parents:
3683
diff
changeset
|
869 HttpContentNegociation negociation; |
|
2cc34837d694
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Sebastien Jodogne <s.jodogne@gmail.com>
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3683
diff
changeset
|
870 EncodePng png(image); |
|
2cc34837d694
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parents:
3683
diff
changeset
|
871 negociation.Register(MIME_PNG, png); |
|
2cc34837d694
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diff
changeset
|
872 |
|
2cc34837d694
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parents:
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diff
changeset
|
873 EncodeJpeg jpeg(image, call); |
|
2cc34837d694
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3683
diff
changeset
|
874 negociation.Register(MIME_JPEG, jpeg); |
|
2cc34837d694
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diff
changeset
|
875 |
|
2cc34837d694
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3683
diff
changeset
|
876 EncodePam pam(image); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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3683
diff
changeset
|
877 negociation.Register(MIME_PAM, pam); |
|
2cc34837d694
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3683
diff
changeset
|
878 |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
879 if (negociation.Apply(call.GetHttpHeaders())) |
|
2cc34837d694
rendering of RGB24
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3683
diff
changeset
|
880 { |
|
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diff
changeset
|
881 image.Answer(call.GetOutput()); |
|
2cc34837d694
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diff
changeset
|
882 } |
|
2cc34837d694
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3683
diff
changeset
|
883 } |
|
3683
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diff
changeset
|
884 }; |
|
3600
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3203
diff
changeset
|
885 |
|
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/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
886 |
|
3683
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changeset
|
887 class GetImageHandler : public IDecodedFrameHandler |
|
12253ddefe5a
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changeset
|
888 { |
|
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diff
changeset
|
889 private: |
|
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diff
changeset
|
890 ImageExtractionMode mode_; |
|
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diff
changeset
|
891 |
|
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parents:
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diff
changeset
|
892 public: |
| 4205 | 893 explicit GetImageHandler(ImageExtractionMode mode) : |
|
3683
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changeset
|
894 mode_(mode) |
|
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changeset
|
895 { |
|
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|
896 } |
|
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changeset
|
897 |
|
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changeset
|
898 virtual void Handle(RestApiGetCall& call, |
|
3712
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diff
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|
899 std::unique_ptr<ImageAccessor>& decoded, |
|
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|
900 const ParsedDicomFile* dicom, |
|
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Support detection of windowing and rescale in Philips multiframe images
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diff
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|
901 unsigned int frame) ORTHANC_OVERRIDE |
|
3683
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|
902 { |
|
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|
903 bool invert = false; |
|
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changeset
|
904 |
|
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|
905 if (mode_ == ImageExtractionMode_Preview) |
|
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|
906 { |
|
4769
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changeset
|
907 if (dicom == NULL) |
|
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changeset
|
908 { |
|
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changeset
|
909 throw OrthancException(ErrorCode_InternalError); |
|
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changeset
|
910 } |
|
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diff
changeset
|
911 |
|
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changeset
|
912 DicomMap tags; |
|
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changeset
|
913 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
|
9da6ca57a977
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changeset
|
914 |
|
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diff
changeset
|
915 DicomImageInformation info(tags); |
|
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|
916 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
|
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|
917 } |
|
3600
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changeset
|
918 |
|
3685
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changeset
|
919 DefaultHandler(call, decoded, mode_, invert); |
|
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|
920 } |
|
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|
921 |
|
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|
922 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
|
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|
923 { |
|
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|
924 return mode_ == ImageExtractionMode_Preview; |
|
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|
925 } |
|
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changeset
|
926 }; |
|
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changeset
|
927 |
|
3600
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/instances/{id}/preview route now takes the windowing into account
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diff
changeset
|
928 |
|
3683
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diff
changeset
|
929 class RenderedFrameHandler : public IDecodedFrameHandler |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
930 { |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
931 private: |
|
4777
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Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
932 static void GetUserArguments(double& windowWidth /* inout */, |
|
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
933 double& windowCenter /* inout */, |
|
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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parents:
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changeset
|
934 unsigned int& argWidth, |
|
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implementation of "/instances/.../rendered" for grayscale images
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|
935 unsigned int& argHeight, |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
936 bool& smooth, |
| 4205 | 937 const RestApiGetCall& call) |
|
3690
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diff
changeset
|
938 { |
|
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
939 static const char* ARG_WINDOW_CENTER = "window-center"; |
|
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|
940 static const char* ARG_WINDOW_WIDTH = "window-width"; |
|
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|
941 static const char* ARG_WIDTH = "width"; |
|
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|
942 static const char* ARG_HEIGHT = "height"; |
|
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
943 static const char* ARG_SMOOTH = "smooth"; |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
944 |
|
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|
945 if (call.HasArgument(ARG_WINDOW_WIDTH) && |
|
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Support detection of windowing and rescale in Philips multiframe images
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|
946 !SerializationToolbox::ParseDouble(windowWidth, call.GetArgument(ARG_WINDOW_WIDTH, ""))) |
|
3685
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changeset
|
947 { |
|
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|
948 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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Support detection of windowing and rescale in Philips multiframe images
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|
949 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
|
3685
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|
950 } |
|
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changeset
|
951 |
|
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changeset
|
952 if (call.HasArgument(ARG_WINDOW_CENTER) && |
|
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changeset
|
953 !SerializationToolbox::ParseDouble(windowCenter, call.GetArgument(ARG_WINDOW_CENTER, ""))) |
|
3683
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skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
954 { |
|
4777
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diff
changeset
|
955 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
956 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
|
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|
957 } |
|
2cc34837d694
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parents:
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changeset
|
958 |
|
3690
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|
959 argWidth = 0; |
|
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
960 argHeight = 0; |
|
3685
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rendering of RGB24
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changeset
|
961 |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
962 if (call.HasArgument(ARG_WIDTH)) |
|
3685
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diff
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|
963 { |
|
2cc34837d694
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parents:
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diff
changeset
|
964 try |
|
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parents:
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diff
changeset
|
965 { |
|
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
966 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
|
3685
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diff
changeset
|
967 if (tmp < 0) |
|
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diff
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|
968 { |
|
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|
969 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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changeset
|
970 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
|
3685
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|
971 } |
|
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diff
changeset
|
972 else |
|
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diff
changeset
|
973 { |
|
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changeset
|
974 argWidth = static_cast<unsigned int>(tmp); |
|
3685
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diff
changeset
|
975 } |
|
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diff
changeset
|
976 } |
|
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parents:
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changeset
|
977 catch (boost::bad_lexical_cast&) |
|
2cc34837d694
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diff
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|
978 { |
|
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changeset
|
979 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
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parents:
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diff
changeset
|
980 "Bad value for argument: " + std::string(ARG_WIDTH)); |
|
3685
2cc34837d694
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diff
changeset
|
981 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
982 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
983 |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
984 if (call.HasArgument(ARG_HEIGHT)) |
|
3685
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rendering of RGB24
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diff
changeset
|
985 { |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
986 try |
|
2cc34837d694
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diff
changeset
|
987 { |
|
3690
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parents:
3687
diff
changeset
|
988 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
|
3685
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rendering of RGB24
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changeset
|
989 if (tmp < 0) |
|
2cc34837d694
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diff
changeset
|
990 { |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
991 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
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diff
changeset
|
992 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
|
3685
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changeset
|
993 } |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
994 else |
|
2cc34837d694
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diff
changeset
|
995 { |
|
3690
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changeset
|
996 argHeight = static_cast<unsigned int>(tmp); |
|
3685
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|
997 } |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
998 } |
|
2cc34837d694
rendering of RGB24
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diff
changeset
|
999 catch (boost::bad_lexical_cast&) |
|
2cc34837d694
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diff
changeset
|
1000 { |
|
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diff
changeset
|
1001 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
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changeset
|
1002 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
|
3685
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changeset
|
1003 } |
|
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changeset
|
1004 } |
|
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changeset
|
1005 |
|
3690
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changeset
|
1006 smooth = false; |
|
3685
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|
1007 |
|
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|
1008 if (call.HasArgument(ARG_SMOOTH)) |
|
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changeset
|
1009 { |
|
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4460
diff
changeset
|
1010 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
|
3685
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1011 } |
|
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|
1012 } |
|
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changeset
|
1013 |
|
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1014 |
|
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|
1015 public: |
|
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|
1016 virtual void Handle(RestApiGetCall& call, |
|
3712
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1017 std::unique_ptr<ImageAccessor>& decoded, |
|
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|
1018 const ParsedDicomFile* dicom, |
|
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changeset
|
1019 unsigned int frame) ORTHANC_OVERRIDE |
|
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|
1020 { |
|
4769
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4722
diff
changeset
|
1021 if (dicom == NULL) |
|
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4722
diff
changeset
|
1022 { |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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4722
diff
changeset
|
1023 throw OrthancException(ErrorCode_InternalError); |
|
9da6ca57a977
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4722
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changeset
|
1024 } |
|
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4722
diff
changeset
|
1025 |
|
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|
1026 PhotometricInterpretation photometric; |
|
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changeset
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1027 const bool invert = (dicom->LookupPhotometricInterpretation(photometric) && |
|
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Support detection of windowing and rescale in Philips multiframe images
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1028 photometric == PhotometricInterpretation_Monochrome1); |
|
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1029 |
|
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Support detection of windowing and rescale in Philips multiframe images
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|
1030 double rescaleIntercept, rescaleSlope, windowCenter, windowWidth; |
|
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changeset
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1031 dicom->GetRescale(rescaleIntercept, rescaleSlope, frame); |
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1032 dicom->GetDefaultWindowing(windowCenter, windowWidth, frame); |
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1033 |
|
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1034 unsigned int argWidth, argHeight; |
|
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changeset
|
1035 bool smooth; |
|
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1036 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
|
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changeset
|
1037 |
|
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|
1038 unsigned int targetWidth = decoded->GetWidth(); |
|
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1039 unsigned int targetHeight = decoded->GetHeight(); |
| 3686 | 1040 |
| 1041 if (decoded->GetWidth() != 0 && | |
| 1042 decoded->GetHeight() != 0) | |
| 1043 { | |
| 1044 float ratio = 1; | |
| 1045 | |
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|
1046 if (argWidth != 0 && |
|
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|
1047 argHeight != 0) |
| 3686 | 1048 { |
|
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1049 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
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1050 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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1051 ratio = std::min(ratioX, ratioY); |
| 3686 | 1052 } |
|
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|
1053 else if (argWidth != 0) |
| 3686 | 1054 { |
|
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1055 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
| 3686 | 1056 } |
|
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|
1057 else if (argHeight != 0) |
|
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1058 { |
|
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1059 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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1060 } |
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1061 |
|
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1062 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
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1063 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
| 3686 | 1064 } |
| 1065 | |
|
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1066 if (decoded->GetFormat() == PixelFormat_RGB24) |
|
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1067 { |
|
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1068 if (targetWidth == decoded->GetWidth() && |
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1069 targetHeight == decoded->GetHeight()) |
|
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1070 { |
|
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1071 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
|
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1072 } |
|
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1073 else |
|
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1074 { |
|
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1075 std::unique_ptr<ImageAccessor> resized( |
|
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1076 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
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1077 |
|
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1078 if (smooth && |
|
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1079 (targetWidth < decoded->GetWidth() || |
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1080 targetHeight < decoded->GetHeight())) |
|
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1081 { |
|
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|
1082 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
|
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1083 } |
|
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changeset
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1084 |
|
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|
1085 ImageProcessing::Resize(*resized, *decoded); |
|
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|
1086 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
|
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1087 } |
|
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|
1088 } |
| 3686 | 1089 else |
| 1090 { | |
|
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|
1091 // Grayscale image: (1) convert to Float32, (2) apply |
|
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1092 // windowing to get a Grayscale8, (3) possibly resize |
|
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1093 |
|
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1094 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
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1095 ImageProcessing::Convert(converted, *decoded); |
|
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1096 |
|
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1097 // Avoid divisions by zero |
|
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1098 if (windowWidth <= 1.0f) |
|
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1099 { |
|
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1100 windowWidth = 1; |
|
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1101 } |
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1102 |
|
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1103 if (std::abs(rescaleSlope) <= 0.0001) |
|
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1104 { |
|
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1105 rescaleSlope = 0.0001; |
|
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1106 } |
|
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1107 |
|
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|
1108 const double scaling = 255.0 * rescaleSlope / windowWidth; |
|
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|
1109 const double offset = (rescaleIntercept - windowCenter + windowWidth / 2.0) / rescaleSlope; |
|
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1110 |
|
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|
1111 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
|
4777
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|
1112 ImageProcessing::ShiftScale(*rescaled, converted, static_cast<float>(offset), static_cast<float>(scaling), false); |
|
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1113 |
|
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1114 if (targetWidth == decoded->GetWidth() && |
|
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1115 targetHeight == decoded->GetHeight()) |
|
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1116 { |
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1117 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
|
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1118 } |
|
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1119 else |
|
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|
1120 { |
|
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|
1121 std::unique_ptr<ImageAccessor> resized( |
|
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1122 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
|
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1123 |
|
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1124 if (smooth && |
|
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1125 (targetWidth < decoded->GetWidth() || |
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1126 targetHeight < decoded->GetHeight())) |
|
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|
1127 { |
|
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|
1128 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
|
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1129 } |
|
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|
1130 |
|
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|
1131 ImageProcessing::Resize(*resized, *rescaled); |
|
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|
1132 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
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|
1133 } |
| 3686 | 1134 } |
|
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|
1135 } |
|
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1136 |
|
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1137 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
|
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1138 { |
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1139 return true; |
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1140 } |
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1141 }; |
|
3600
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|
1142 } |
|
4066998150ef
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1143 |
|
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|
1144 |
|
751
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refactoring of OrthancRestApi
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diff
changeset
|
1145 template <enum ImageExtractionMode mode> |
| 974 | 1146 static void GetImage(RestApiGetCall& call) |
|
751
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changeset
|
1147 { |
|
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
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changeset
|
1148 Semaphore::Locker locker(throttlingSemaphore_); |
|
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|
1149 |
|
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changeset
|
1150 GetImageHandler handler(mode); |
|
4406
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1151 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
|
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1152 } |
|
1906
d7c1cb559431
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1153 |
|
1826
ac5b0b4e2434
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1154 |
|
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1155 static void GetRenderedFrame(RestApiGetCall& call) |
|
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1156 { |
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3926
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1157 Semaphore::Locker locker(throttlingSemaphore_); |
|
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1158 |
|
3683
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|
1159 RenderedFrameHandler handler; |
|
4406
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1160 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
|
751
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1161 } |
|
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1162 |
|
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1163 |
|
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1164 static void DocumentSharedNumpy(RestApiGetCall& call) |
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1165 { |
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1166 call.GetDocumentation() |
|
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1167 .SetUriArgument("id", "Orthanc identifier of the DICOM resource of interest") |
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1168 .SetHttpGetArgument("compress", RestApiCallDocumentation::Type_Boolean, "Compress the file as `.npz`", false) |
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1169 .SetHttpGetArgument("rescale", RestApiCallDocumentation::Type_Boolean, |
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1170 "On grayscale images, apply the rescaling and return floating-point values", false) |
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1171 .AddAnswerType(MimeType_PlainText, "Numpy file: https://numpy.org/devdocs/reference/generated/numpy.lib.format.html"); |
|
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1172 } |
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1173 |
|
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|
1174 |
|
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|
1175 namespace |
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1176 { |
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|
1177 class NumpyVisitor : public boost::noncopyable |
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1178 { |
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1179 private: |
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1180 bool rescale_; |
|
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1181 unsigned int depth_; |
|
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|
1182 unsigned int currentDepth_; |
| 4858 | 1183 unsigned int width_; |
|
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1184 unsigned int height_; |
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1185 PixelFormat format_; |
|
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1186 ChunkedBuffer buffer_; |
|
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1187 |
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1188 public: |
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1189 NumpyVisitor(unsigned int depth /* can be zero if 2D frame */, |
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1190 bool rescale) : |
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1191 rescale_(rescale), |
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|
1192 depth_(depth), |
| 4858 | 1193 currentDepth_(0), |
| 1194 width_(0), // dummy initialization | |
| 1195 height_(0), // dummy initialization | |
| 1196 format_(PixelFormat_Grayscale8) // dummy initialization | |
|
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1197 { |
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1198 } |
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1199 |
| 4858 | 1200 void WriteFrame(const ParsedDicomFile& dicom, |
|
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|
1201 unsigned int frame) |
|
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1202 { |
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|
1203 std::unique_ptr<ImageAccessor> decoded(dicom.DecodeFrame(frame)); |
|
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1204 |
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|
1205 if (decoded.get() == NULL) |
|
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1206 { |
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|
1207 throw OrthancException(ErrorCode_NotImplemented, "Cannot decode DICOM instance"); |
|
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1208 } |
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1209 |
|
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|
1210 if (currentDepth_ == 0) |
|
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1211 { |
|
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|
1212 width_ = decoded->GetWidth(); |
|
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|
1213 height_ = decoded->GetHeight(); |
|
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|
1214 format_ = decoded->GetFormat(); |
|
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1215 } |
|
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|
1216 else if (width_ != decoded->GetWidth() || |
|
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|
1217 height_ != decoded->GetHeight()) |
|
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1218 { |
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|
1219 throw OrthancException(ErrorCode_IncompatibleImageSize, "The size of the frames varies across the instance(s)"); |
|
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1220 } |
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1221 else if (format_ != decoded->GetFormat()) |
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|
1222 { |
|
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|
1223 throw OrthancException(ErrorCode_IncompatibleImageFormat, "The pixel format of the frames varies across the instance(s)"); |
|
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|
1224 } |
|
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|
1225 |
|
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|
1226 if (rescale_ && |
|
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|
1227 decoded->GetFormat() != PixelFormat_RGB24) |
|
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|
1228 { |
|
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|
1229 if (currentDepth_ == 0) |
|
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|
1230 { |
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|
1231 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, PixelFormat_Float32); |
|
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|
1232 } |
|
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|
1233 |
|
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|
1234 double rescaleIntercept, rescaleSlope; |
|
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|
1235 dicom.GetRescale(rescaleIntercept, rescaleSlope, frame); |
|
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|
1236 |
|
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|
1237 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
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|
1238 ImageProcessing::Convert(converted, *decoded); |
|
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|
1239 ImageProcessing::ShiftScale2(converted, static_cast<float>(rescaleIntercept), static_cast<float>(rescaleSlope), false); |
|
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1240 |
|
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|
1241 NumpyWriter::WritePixels(buffer_, converted); |
|
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|
1242 } |
|
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|
1243 else |
|
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1244 { |
|
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|
1245 if (currentDepth_ == 0) |
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1246 { |
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|
1247 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, format_); |
|
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|
1248 } |
|
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|
1249 |
|
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|
1250 NumpyWriter::WritePixels(buffer_, *decoded); |
|
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1251 } |
|
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|
1252 |
|
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|
1253 currentDepth_ ++; |
|
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|
1254 } |
|
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|
1255 |
|
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|
1256 void Answer(RestApiOutput& output, |
|
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1257 bool compress) |
|
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1258 { |
|
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|
1259 if ((depth_ == 0 && currentDepth_ != 1) || |
|
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|
1260 (depth_ != 0 && currentDepth_ != depth_)) |
|
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1261 { |
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|
1262 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
|
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1263 } |
|
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|
1264 else |
|
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|
1265 { |
|
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|
1266 std::string answer; |
|
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|
1267 NumpyWriter::Finalize(answer, buffer_, compress); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1268 output.AnswerBuffer(answer, MimeType_Binary); |
|
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|
1269 } |
|
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|
1270 } |
|
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1271 }; |
|
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|
1272 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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1273 |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1274 |
|
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|
1275 static void GetNumpyFrame(RestApiGetCall& call) |
|
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1276 { |
|
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|
1277 if (call.IsDocumentation()) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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1278 { |
|
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|
1279 DocumentSharedNumpy(call); |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1280 call.GetDocumentation() |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1281 .SetTag("Instances") |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1282 .SetSummary("Decode frame for numpy") |
|
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|
1283 .SetDescription("Decode one frame of interest from the given DICOM instance, for use with numpy in Python. " |
|
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|
1284 "The numpy array has 3 dimensions: (height, width, color channel).") |
|
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|
1285 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
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1286 } |
|
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|
1287 else |
|
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download of numpy arrays from the REST API
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1288 { |
|
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|
1289 const std::string instanceId = call.GetUriComponent("id", ""); |
|
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|
1290 const bool compress = call.GetBooleanArgument("compress", false); |
|
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|
1291 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
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1292 |
|
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|
1293 uint32_t frame; |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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1294 if (!SerializationToolbox::ParseUnsignedInteger32(frame, call.GetUriComponent("frame", "0"))) |
|
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1295 { |
|
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|
1296 throw OrthancException(ErrorCode_ParameterOutOfRange, "Expected an unsigned integer for the \"frame\" argument"); |
|
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1297 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1298 |
|
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|
1299 NumpyVisitor visitor(0 /* no depth, 2D frame */, rescale); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1300 |
|
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1301 { |
|
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|
1302 Semaphore::Locker throttling(throttlingSemaphore_); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1303 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
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|
1304 |
|
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|
1305 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
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1306 } |
|
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|
1307 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1308 visitor.Answer(call.GetOutput(), compress); |
|
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|
1309 } |
|
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1310 } |
|
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1311 |
|
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|
1312 |
|
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|
1313 static void GetNumpyInstance(RestApiGetCall& call) |
|
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1314 { |
|
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1315 if (call.IsDocumentation()) |
|
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1316 { |
|
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|
1317 DocumentSharedNumpy(call); |
|
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|
1318 call.GetDocumentation() |
|
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|
1319 .SetTag("Instances") |
|
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|
1320 .SetSummary("Decode instance for numpy") |
|
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|
1321 .SetDescription("Decode the given DICOM instance, for use with numpy in Python. " |
|
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|
1322 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
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1323 } |
|
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1324 else |
|
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|
1325 { |
|
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|
1326 const std::string instanceId = call.GetUriComponent("id", ""); |
|
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|
1327 const bool compress = call.GetBooleanArgument("compress", false); |
|
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|
1328 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
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|
1329 |
|
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1330 { |
|
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|
1331 Semaphore::Locker throttling(throttlingSemaphore_); |
|
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changeset
|
1332 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
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|
1333 |
|
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|
1334 const unsigned int depth = locker.GetDicom().GetFramesCount(); |
|
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|
1335 if (depth == 0) |
|
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|
1336 { |
|
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|
1337 throw OrthancException(ErrorCode_BadFileFormat, "Empty DICOM instance"); |
|
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1338 } |
|
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|
1339 |
|
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changeset
|
1340 NumpyVisitor visitor(depth, rescale); |
|
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|
1341 |
|
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|
1342 for (unsigned int frame = 0; frame < depth; frame++) |
|
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|
1343 { |
|
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|
1344 visitor.WriteFrame(locker.GetDicom(), frame); |
|
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|
1345 } |
|
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|
1346 |
|
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|
1347 visitor.Answer(call.GetOutput(), compress); |
|
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|
1348 } |
|
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|
1349 } |
|
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|
1350 } |
|
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|
1351 |
|
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|
1352 |
|
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|
1353 static void GetNumpySeries(RestApiGetCall& call) |
|
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|
1354 { |
|
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|
1355 if (call.IsDocumentation()) |
|
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|
1356 { |
|
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|
1357 DocumentSharedNumpy(call); |
|
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|
1358 call.GetDocumentation() |
|
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|
1359 .SetTag("Series") |
|
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|
1360 .SetSummary("Decode series for numpy") |
|
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|
1361 .SetDescription("Decode the given DICOM series, for use with numpy in Python. " |
|
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|
1362 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
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|
1363 } |
|
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|
1364 else |
|
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|
1365 { |
|
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changeset
|
1366 const std::string seriesId = call.GetUriComponent("id", ""); |
|
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|
1367 const bool compress = call.GetBooleanArgument("compress", false); |
|
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|
1368 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
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|
1369 |
|
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|
1370 Semaphore::Locker throttling(throttlingSemaphore_); |
|
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|
1371 |
|
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changeset
|
1372 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
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|
1373 SliceOrdering ordering(index, seriesId); |
|
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|
1374 |
|
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|
1375 unsigned int depth = 0; |
|
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changeset
|
1376 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
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|
1377 { |
|
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changeset
|
1378 depth += ordering.GetFramesCount(i); |
|
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|
1379 } |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1380 |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1381 ServerContext& context = OrthancRestApi::GetContext(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1382 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1383 NumpyVisitor visitor(depth, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1384 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1385 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1386 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1387 const std::string& instanceId = ordering.GetInstanceId(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1388 unsigned int framesCount = ordering.GetFramesCount(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1389 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1390 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1391 ServerContext::DicomCacheLocker locker(context, instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1392 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1393 for (unsigned int frame = 0; frame < framesCount; frame++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1394 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1395 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1396 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1397 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1398 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1399 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1400 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1401 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1402 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1403 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1404 |
| 974 | 1405 static void GetMatlabImage(RestApiGetCall& call) |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1406 { |
| 4414 | 1407 if (call.IsDocumentation()) |
| 1408 { | |
| 1409 std::string description; | |
| 1410 | |
| 1411 if (call.HasUriComponent("frame")) | |
| 1412 { | |
| 1413 description = "Decode one frame of interest from the given DICOM instance"; | |
| 1414 call.GetDocumentation() | |
| 1415 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
| 1416 } | |
| 1417 else | |
| 1418 { | |
| 1419 description = "Decode the first frame of the given DICOM instance."; | |
| 1420 } | |
| 1421 | |
| 1422 call.GetDocumentation() | |
| 1423 .SetTag("Instances") | |
| 1424 .SetSummary("Decode frame for Matlab") | |
| 1425 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
| 1426 "https://book.orthanc-server.com/faq/matlab.html") | |
| 1427 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 1428 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
| 1429 return; | |
| 1430 } | |
| 1431 | |
|
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1432 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
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diff
changeset
|
1433 |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1434 ServerContext& context = OrthancRestApi::GetContext(call); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1435 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1436 std::string frameId = call.GetUriComponent("frame", "0"); |
|
87791ebc1f50
download matlab images
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diff
changeset
|
1437 |
|
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1438 unsigned int frame; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1439 try |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1440 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1441 frame = boost::lexical_cast<unsigned int>(frameId); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1442 } |
|
2836
7133ad478eea
fix Debian warnings
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diff
changeset
|
1443 catch (boost::bad_lexical_cast&) |
|
874
87791ebc1f50
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diff
changeset
|
1444 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1445 return; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1446 } |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1447 |
|
87791ebc1f50
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diff
changeset
|
1448 std::string publicId = call.GetUriComponent("id", ""); |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1449 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
|
874
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1450 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1451 if (decoded.get() == NULL) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1452 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1453 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1454 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1455 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1456 else |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1457 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1458 std::string result; |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1459 decoded->ToMatlabString(result); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1460 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1461 } |
|
874
87791ebc1f50
download matlab images
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diff
changeset
|
1462 } |
|
87791ebc1f50
download matlab images
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diff
changeset
|
1463 |
|
87791ebc1f50
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diff
changeset
|
1464 |
|
2408
26a0cc24d48d
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1465 template <bool GzipCompression> |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1466 static void GetRawFrame(RestApiGetCall& call) |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1467 { |
| 4408 | 1468 if (call.IsDocumentation()) |
| 1469 { | |
| 1470 call.GetDocumentation() | |
| 1471 .SetTag("Instances") | |
| 1472 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
| 1473 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
| 1474 "bypassing image decoding. This is notably useful to access the source files " | |
| 1475 "in compressed transfer syntaxes." + | |
| 1476 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
1477 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
| 4408 | 1478 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
| 1479 | |
| 1480 if (GzipCompression) | |
| 1481 { | |
| 1482 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
| 1483 } | |
| 1484 else | |
| 1485 { | |
| 1486 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
| 1487 } | |
| 1488 return; | |
| 1489 } | |
| 1490 | |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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1906
diff
changeset
|
1491 std::string frameId = call.GetUriComponent("frame", "0"); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1492 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1493 unsigned int frame; |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1494 try |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1495 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1496 frame = boost::lexical_cast<unsigned int>(frameId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1497 } |
|
2836
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fix Debian warnings
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2804
diff
changeset
|
1498 catch (boost::bad_lexical_cast&) |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1499 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1500 return; |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1501 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1502 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1503 std::string publicId = call.GetUriComponent("id", ""); |
|
2908
9d277f8ad698
new enumeration: MimeType
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parents:
2905
diff
changeset
|
1504 std::string raw; |
|
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
1505 MimeType mime; |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1506 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1507 { |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1508 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1509 locker.GetDicom().GetRawFrame(raw, mime, frame); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1510 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1511 |
|
2408
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New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1512 if (GzipCompression) |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1513 { |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1514 GzipCompressor gzip; |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1515 std::string compressed; |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1516 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
|
2908
9d277f8ad698
new enumeration: MimeType
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2905
diff
changeset
|
1517 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1518 } |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1519 else |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1520 { |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1521 call.GetOutput().AnswerBuffer(raw, mime); |
|
26a0cc24d48d
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1522 } |
|
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1523 } |
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1524 |
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1525 |
| 974 | 1526 static void GetResourceStatistics(RestApiGetCall& call) |
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1527 { |
| 4418 | 1528 if (call.IsDocumentation()) |
| 1529 { | |
| 1530 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1531 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1532 call.GetDocumentation() | |
| 1533 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1534 .SetSummary("Get " + r + " statistics") | |
| 1535 .SetDescription("Get statistics about the given " + r) | |
| 1536 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1537 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
| 1538 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1539 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1540 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
| 1541 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1542 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1543 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1544 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
| 1545 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
| 1546 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
| 1547 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1548 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1549 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1550 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1551 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1552 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1553 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1554 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
| 1555 | |
| 1556 switch (t) | |
| 1557 { | |
| 1558 // Do NOT add "break" below this point! | |
| 1559 case ResourceType_Patient: | |
| 1560 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
| 1561 "Number of child studies within this " + r); | |
| 1562 | |
| 1563 case ResourceType_Study: | |
| 1564 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
| 1565 "Number of child series within this " + r); | |
| 1566 | |
| 1567 case ResourceType_Series: | |
| 1568 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
| 1569 "Number of child instances within this " + r); | |
| 1570 | |
| 1571 case ResourceType_Instance: | |
| 1572 default: | |
| 1573 break; | |
| 1574 } | |
| 1575 | |
| 1576 return; | |
| 1577 } | |
| 1578 | |
|
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1579 static const uint64_t MEGA_BYTES = 1024 * 1024; |
|
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1580 |
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1581 std::string publicId = call.GetUriComponent("id", ""); |
|
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1582 |
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1583 ResourceType type; |
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1584 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
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1585 unsigned int countStudies, countSeries, countInstances; |
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1586 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
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1587 type, diskSize, uncompressedSize, countStudies, countSeries, |
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1588 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
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1589 |
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1590 Json::Value result = Json::objectValue; |
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1591 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1592 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1593 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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1594 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
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1595 |
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1596 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
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1597 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1598 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
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1599 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
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1600 |
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1601 switch (type) |
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1602 { |
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1603 // Do NOT add "break" below this point! |
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1604 case ResourceType_Patient: |
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1605 result["CountStudies"] = countStudies; |
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1606 |
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1607 case ResourceType_Study: |
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1608 result["CountSeries"] = countSeries; |
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1609 |
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1610 case ResourceType_Series: |
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1611 result["CountInstances"] = countInstances; |
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1612 |
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1613 case ResourceType_Instance: |
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1614 default: |
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1615 break; |
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1616 } |
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1617 |
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1618 call.GetOutput().AnswerJson(result); |
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1619 } |
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1620 |
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1621 |
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1622 |
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1623 // Handling of metadata ----------------------------------------------------- |
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1624 |
| 4205 | 1625 static void CheckValidResourceType(const RestApiCall& call) |
|
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1626 { |
|
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1627 assert(!call.GetFullUri().empty()); |
| 4409 | 1628 const std::string resourceType = call.GetFullUri() [0]; |
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1629 StringToResourceType(resourceType.c_str()); |
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1630 } |
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1631 |
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1632 |
| 974 | 1633 static void ListMetadata(RestApiGetCall& call) |
|
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1634 { |
| 4414 | 1635 if (call.IsDocumentation()) |
| 1636 { | |
| 1637 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1638 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1639 call.GetDocumentation() | |
| 1640 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1641 .SetSummary("List metadata") | |
| 1642 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
| 1643 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1644 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
| 1645 "If present, also retrieve the value of the individual metadata", false) | |
| 1646 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " | |
| 1647 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
| 1648 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
| 1649 return; | |
| 1650 } | |
| 1651 | |
|
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1652 assert(!call.GetFullUri().empty()); |
| 4554 | 1653 const std::string publicId = call.GetUriComponent("id", ""); |
| 1654 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
|
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1655 |
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1656 typedef std::map<MetadataType, std::string> Metadata; |
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1657 |
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|
1658 Metadata metadata; |
| 4554 | 1659 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
|
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1660 |
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|
1661 Json::Value result; |
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1662 |
|
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|
1663 if (call.HasArgument("expand")) |
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1664 { |
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1665 result = Json::objectValue; |
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1666 |
|
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1667 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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1668 { |
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1669 std::string key = EnumerationToString(it->first); |
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1670 result[key] = it->second; |
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1671 } |
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1672 } |
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1673 else |
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1674 { |
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|
1675 result = Json::arrayValue; |
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1676 |
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1677 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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1678 { |
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1679 result.append(EnumerationToString(it->first)); |
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1680 } |
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1681 } |
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1682 |
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1683 call.GetOutput().AnswerJson(result); |
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1684 } |
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1685 |
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1686 |
| 4657 | 1687 static void SetStringContentETag(const RestApiOutput& output, |
| 1688 int64_t revision, | |
| 1689 const std::string& value) | |
|
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1690 { |
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1691 std::string md5; |
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1692 Toolbox::ComputeMD5(md5, value); |
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1693 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1694 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1695 } |
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1696 |
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1697 |
| 4657 | 1698 static void SetBufferContentETag(const RestApiOutput& output, |
|
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1699 int64_t revision, |
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1700 const void* data, |
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1701 size_t size) |
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1702 { |
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1703 std::string md5; |
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1704 Toolbox::ComputeMD5(md5, data, size); |
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1705 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1706 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1707 } |
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1708 |
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1709 |
| 4657 | 1710 static void SetAttachmentETag(const RestApiOutput& output, |
|
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1711 int64_t revision, |
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1712 const FileInfo& info) |
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1713 { |
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1714 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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1715 info.GetUncompressedMD5() + "\""); |
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1716 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1717 } |
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1718 |
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1719 |
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1720 static std::string GetMD5(const std::string& value) |
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1721 { |
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1722 std::string md5; |
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1723 Toolbox::ComputeMD5(md5, value); |
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1724 return md5; |
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1725 } |
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1726 |
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1727 |
|
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1728 static bool GetRevisionHeader(int64_t& revision /* out */, |
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1729 std::string& md5 /* out */, |
|
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1730 const RestApiCall& call, |
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1731 const std::string& header) |
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1732 { |
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1733 std::string lower; |
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1734 Toolbox::ToLowerCase(lower, header); |
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1735 |
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1736 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1737 if (found == call.GetHttpHeaders().end()) |
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1738 { |
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1739 return false; |
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1740 } |
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1741 else |
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1742 { |
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1743 std::string value = Toolbox::StripSpaces(found->second); |
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1744 Toolbox::RemoveSurroundingQuotes(value); |
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1745 |
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1746 try |
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1747 { |
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1748 size_t comma = value.find('-'); |
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1749 if (comma != std::string::npos) |
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1750 { |
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1751 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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1752 md5 = value.substr(comma + 1); |
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1753 return true; |
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1754 } |
|
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1755 } |
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1756 catch (boost::bad_lexical_cast&) |
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1757 { |
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1758 } |
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1759 |
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1760 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1761 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
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1762 } |
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1763 } |
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1764 |
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1765 |
| 974 | 1766 static void GetMetadata(RestApiGetCall& call) |
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1767 { |
| 4414 | 1768 if (call.IsDocumentation()) |
| 1769 { | |
| 1770 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1771 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1772 call.GetDocumentation() | |
| 1773 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1774 .SetSummary("Get metadata") | |
| 1775 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
| 1776 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1777 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
|
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1778 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1779 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1780 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4414 | 1781 return; |
| 1782 } | |
| 1783 | |
|
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1784 assert(!call.GetFullUri().empty()); |
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1785 const std::string publicId = call.GetUriComponent("id", ""); |
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1786 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1787 |
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1788 std::string name = call.GetUriComponent("name", ""); |
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1789 MetadataType metadata = StringToMetadata(name); |
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1790 |
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1791 std::string value; |
|
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1792 int64_t revision; |
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1793 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1794 { |
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1795 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
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1796 |
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1797 int64_t userRevision; |
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1798 std::string userMD5; |
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1799 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1800 userRevision == revision && |
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1801 userMD5 == GetMD5(value)) |
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1802 { |
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1803 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1804 } |
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1805 else |
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1806 { |
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1807 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1808 } |
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1809 } |
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1810 } |
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1811 |
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1812 |
| 974 | 1813 static void DeleteMetadata(RestApiDeleteCall& call) |
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1814 { |
| 4414 | 1815 if (call.IsDocumentation()) |
| 1816 { | |
| 1817 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1818 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1819 call.GetDocumentation() | |
| 1820 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1821 .SetSummary("Delete metadata") | |
| 1822 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
| 1823 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
| 1824 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
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1825 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
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1826 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
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1827 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4414 | 1828 return; |
| 1829 } | |
| 1830 | |
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1831 CheckValidResourceType(call); |
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1832 const std::string publicId = call.GetUriComponent("id", ""); |
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1833 |
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1834 std::string name = call.GetUriComponent("name", ""); |
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1835 MetadataType metadata = StringToMetadata(name); |
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1836 |
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1837 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
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1838 { |
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1839 bool found; |
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1840 int64_t revision; |
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1841 std::string md5; |
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1842 if (GetRevisionHeader(revision, md5, call, "if-match")) |
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1843 { |
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1844 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
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1845 } |
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1846 else |
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1847 { |
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1848 OrthancConfiguration::ReaderLock lock; |
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1849 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1850 { |
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1851 throw OrthancException(ErrorCode_Revision, |
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1852 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
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1853 } |
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1854 else |
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1855 { |
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1856 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
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1857 } |
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1858 } |
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1859 |
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1860 if (found) |
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1861 { |
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1862 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1863 } |
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1864 else |
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1865 { |
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1866 throw OrthancException(ErrorCode_UnknownResource); |
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1867 } |
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1868 } |
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1869 else |
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1870 { |
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1871 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1872 } |
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1873 } |
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1874 |
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1875 |
| 974 | 1876 static void SetMetadata(RestApiPutCall& call) |
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1877 { |
| 4414 | 1878 if (call.IsDocumentation()) |
| 1879 { | |
| 1880 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1881 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1882 call.GetDocumentation() | |
| 1883 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1884 .SetSummary("Set metadata") | |
| 1885 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
| 1886 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
| 1887 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1888 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1889 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
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1890 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
| 4414 | 1891 return; |
| 1892 } | |
| 1893 | |
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1894 CheckValidResourceType(call); |
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1895 |
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1896 std::string publicId = call.GetUriComponent("id", ""); |
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1897 std::string name = call.GetUriComponent("name", ""); |
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1898 MetadataType metadata = StringToMetadata(name); |
|
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1899 |
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1900 std::string value; |
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1901 call.BodyToString(value); |
|
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1902 |
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1903 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
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1904 { |
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1905 int64_t oldRevision; |
|
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1906 std::string oldMD5; |
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1907 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
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1908 |
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1909 if (!hasOldRevision) |
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1910 { |
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1911 OrthancConfiguration::ReaderLock lock; |
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1912 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1913 { |
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1914 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
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1915 // the actual value of "oldRevision" if the metadata is |
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1916 // inexistent as expected |
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1917 hasOldRevision = true; |
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1918 oldRevision = -1; // dummy value |
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1919 oldMD5.clear(); // dummy value |
|
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1920 } |
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1921 } |
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1922 |
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1923 int64_t newRevision; |
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1924 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
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1925 hasOldRevision, oldRevision, oldMD5); |
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1926 |
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1927 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
|
2908
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1928 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1929 } |
|
2128
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1930 else |
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1931 { |
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1932 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1933 } |
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1934 } |
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|
1935 |
|
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|
1936 |
|
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|
1937 |
|
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|
1938 |
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|
1939 // Handling of attached files ----------------------------------------------- |
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1940 |
| 974 | 1941 static void ListAttachments(RestApiGetCall& call) |
|
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1942 { |
| 4409 | 1943 if (call.IsDocumentation()) |
| 1944 { | |
| 1945 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1946 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1947 call.GetDocumentation() | |
| 1948 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1949 .SetSummary("List attachments") | |
| 1950 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
| 1951 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
4853
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1952 .SetHttpGetArgument("full", RestApiCallDocumentation::Type_String, |
|
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|
1953 "If present, retrieve the attachments list and their numerical ids", false) |
| 4409 | 1954 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") |
| 1955 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
| 1956 return; | |
| 1957 } | |
| 1958 | |
| 1959 const std::string resourceType = call.GetFullUri() [0]; | |
| 1960 const std::string publicId = call.GetUriComponent("id", ""); | |
|
4514
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|
1961 std::set<FileContentType> attachments; |
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1962 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
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1963 |
|
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|
1964 Json::Value result; |
|
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1965 |
|
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|
1966 if (call.HasArgument("full")) |
|
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|
1967 { |
|
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1968 result = Json::objectValue; |
|
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|
1969 |
|
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Added links to download attachments from the Orthanc Explorer
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parents:
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|
1970 for (std::set<FileContentType>::const_iterator |
|
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|
1971 it = attachments.begin(); it != attachments.end(); ++it) |
|
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parents:
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changeset
|
1972 { |
|
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Added links to download attachments from the Orthanc Explorer
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|
1973 std::string key = EnumerationToString(*it); |
|
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|
1974 result[key] = static_cast<uint16_t>(*it); |
|
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parents:
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|
1975 } |
|
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Added links to download attachments from the Orthanc Explorer
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parents:
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|
1976 } |
|
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Added links to download attachments from the Orthanc Explorer
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diff
changeset
|
1977 else |
|
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Added links to download attachments from the Orthanc Explorer
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parents:
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diff
changeset
|
1978 { |
|
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Added links to download attachments from the Orthanc Explorer
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diff
changeset
|
1979 result = Json::arrayValue; |
|
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Added links to download attachments from the Orthanc Explorer
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diff
changeset
|
1980 |
|
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Added links to download attachments from the Orthanc Explorer
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parents:
4836
diff
changeset
|
1981 for (std::set<FileContentType>::const_iterator |
|
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parents:
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diff
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|
1982 it = attachments.begin(); it != attachments.end(); ++it) |
|
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parents:
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diff
changeset
|
1983 { |
|
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Added links to download attachments from the Orthanc Explorer
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changeset
|
1984 result.append(EnumerationToString(*it)); |
|
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Added links to download attachments from the Orthanc Explorer
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|
1985 } |
|
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|
1986 } |
|
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changeset
|
1987 |
|
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diff
changeset
|
1988 call.GetOutput().AnswerJson(result); |
|
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parents:
diff
changeset
|
1989 } |
|
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parents:
diff
changeset
|
1990 |
|
5197fd35333c
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parents:
diff
changeset
|
1991 |
|
4627
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4623
diff
changeset
|
1992 static void AddAttachmentDocumentation(RestApiGetCall& call, |
|
f7d5372b59b3
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|
1993 const std::string& resourceType) |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
1994 { |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
1995 call.GetDocumentation() |
|
f7d5372b59b3
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diff
changeset
|
1996 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
|
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diff
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|
1997 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
1998 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
1999 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
|
f7d5372b59b3
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parents:
4623
diff
changeset
|
2000 } |
|
f7d5372b59b3
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4623
diff
changeset
|
2001 |
|
f7d5372b59b3
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parents:
4623
diff
changeset
|
2002 |
|
f7d5372b59b3
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4623
diff
changeset
|
2003 static bool GetAttachmentInfo(FileInfo& info, |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
2004 RestApiGetCall& call) |
|
751
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diff
changeset
|
2005 { |
|
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parents:
diff
changeset
|
2006 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
2007 |
|
4627
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diff
changeset
|
2008 const std::string publicId = call.GetUriComponent("id", ""); |
|
f7d5372b59b3
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4623
diff
changeset
|
2009 const std::string name = call.GetUriComponent("name", ""); |
|
751
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parents:
diff
changeset
|
2010 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
2011 |
|
4627
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parents:
4623
diff
changeset
|
2012 int64_t revision; |
|
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2013 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
|
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2014 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2015 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
|
4627
f7d5372b59b3
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4623
diff
changeset
|
2016 |
|
f7d5372b59b3
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parents:
4623
diff
changeset
|
2017 int64_t userRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2018 std::string userMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2019 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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parents:
4627
diff
changeset
|
2020 revision == userRevision && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2021 info.GetUncompressedMD5() == userMD5) |
|
4627
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4623
diff
changeset
|
2022 { |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
2023 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
f7d5372b59b3
handling revisions of attachments
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diff
changeset
|
2024 return false; |
|
f7d5372b59b3
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changeset
|
2025 } |
|
f7d5372b59b3
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diff
changeset
|
2026 else |
|
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4623
diff
changeset
|
2027 { |
|
f7d5372b59b3
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4623
diff
changeset
|
2028 return true; |
|
f7d5372b59b3
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4623
diff
changeset
|
2029 } |
|
f7d5372b59b3
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diff
changeset
|
2030 } |
|
f7d5372b59b3
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diff
changeset
|
2031 else |
|
f7d5372b59b3
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diff
changeset
|
2032 { |
|
f7d5372b59b3
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changeset
|
2033 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
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changeset
|
2034 } |
|
751
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diff
changeset
|
2035 } |
|
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parents:
diff
changeset
|
2036 |
|
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diff
changeset
|
2037 |
| 974 | 2038 static void GetAttachmentOperations(RestApiGetCall& call) |
|
751
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|
2039 { |
| 4409 | 2040 if (call.IsDocumentation()) |
| 2041 { | |
| 2042 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2043 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
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4623
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changeset
|
2044 AddAttachmentDocumentation(call, r); |
| 4409 | 2045 call.GetDocumentation() |
| 2046 .SetTag("Other") | |
| 4414 | 2047 .SetSummary("List operations on attachments") |
| 2048 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
| 4409 | 2049 .AddAnswerType(MimeType_Json, "List of the available operations") |
| 2050 .SetHttpGetSample("https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2/attachments/dicom", true); | |
| 2051 return; | |
| 2052 } | |
| 2053 | |
|
751
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refactoring of OrthancRestApi
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diff
changeset
|
2054 FileInfo info; |
|
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diff
changeset
|
2055 if (GetAttachmentInfo(info, call)) |
|
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parents:
diff
changeset
|
2056 { |
|
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parents:
diff
changeset
|
2057 Json::Value operations = Json::arrayValue; |
|
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diff
changeset
|
2058 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2059 operations.append("compress"); |
|
751
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diff
changeset
|
2060 operations.append("compressed-data"); |
|
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parents:
diff
changeset
|
2061 |
|
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parents:
diff
changeset
|
2062 if (info.GetCompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2063 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2064 operations.append("compressed-md5"); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2065 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2066 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2067 operations.append("compressed-size"); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2068 operations.append("data"); |
|
4883
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Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
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|
2069 operations.append("info"); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
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|
2070 operations.append("is-compressed"); |
|
751
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2071 |
|
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diff
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|
2072 if (info.GetUncompressedMD5() != "") |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2073 { |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2074 operations.append("md5"); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2075 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2076 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2077 operations.append("size"); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
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|
2078 operations.append("uncompress"); |
|
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|
2079 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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2080 if (info.GetCompressedMD5() != "" && |
|
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|
2081 info.GetUncompressedMD5() != "") |
|
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|
2082 { |
|
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diff
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|
2083 operations.append("verify-md5"); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2084 } |
|
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parents:
diff
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|
2085 |
|
4883
504624b0a062
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Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2086 operations.append("uuid"); |
|
504624b0a062
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Alain Mazy <am@osimis.io>
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|
2087 |
|
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|
2088 call.GetOutput().AnswerJson(operations); |
|
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|
2089 } |
|
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diff
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|
2090 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2091 |
|
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diff
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|
2092 |
|
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|
2093 template <int uncompress> |
| 974 | 2094 static void GetAttachmentData(RestApiGetCall& call) |
|
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|
2095 { |
| 4409 | 2096 if (call.IsDocumentation()) |
| 2097 { | |
| 2098 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2099 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2100 call.GetDocumentation() | |
| 2101 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2102 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
| 2103 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
| 4418 | 2104 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
| 4409 | 2105 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 2106 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
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2107 .AddAnswerType(MimeType_Binary, "The attachment") |
|
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2108 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
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|
2109 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4409 | 2110 return; |
| 2111 } | |
| 2112 | |
|
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2113 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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2114 |
|
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2115 CheckValidResourceType(call); |
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2116 |
|
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|
2117 std::string publicId = call.GetUriComponent("id", ""); |
|
1146
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|
2118 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
|
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2119 |
|
4640
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changeset
|
2120 FileInfo info; |
|
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|
2121 if (GetAttachmentInfo(info, call)) |
|
1146
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2122 { |
|
4640
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|
2123 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
|
66109d24d26e
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2124 |
|
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|
2125 if (uncompress) |
|
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|
2126 { |
|
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|
2127 context.AnswerAttachment(call.GetOutput(), publicId, type); |
|
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2128 } |
|
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2129 else |
|
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|
2130 { |
|
4640
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|
2131 // Return the raw data (possibly compressed), as stored on the filesystem |
|
66109d24d26e
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|
2132 std::string content; |
|
66109d24d26e
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|
2133 int64_t revision; |
|
66109d24d26e
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|
2134 context.ReadAttachment(content, revision, publicId, type, false); |
|
66109d24d26e
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2135 |
|
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|
2136 int64_t userRevision; |
|
66109d24d26e
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|
2137 std::string userMD5; |
|
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|
2138 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
66109d24d26e
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|
2139 revision == userRevision && |
|
66109d24d26e
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changeset
|
2140 info.GetUncompressedMD5() == userMD5) |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
2141 { |
|
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changeset
|
2142 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
66109d24d26e
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|
2143 } |
|
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|
2144 else |
|
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|
2145 { |
|
66109d24d26e
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|
2146 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
|
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|
2147 } |
|
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|
2148 } |
|
1146
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|
2149 } |
|
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|
2150 } |
|
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|
2151 |
|
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|
2152 |
| 974 | 2153 static void GetAttachmentSize(RestApiGetCall& call) |
|
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2154 { |
| 4409 | 2155 if (call.IsDocumentation()) |
| 2156 { | |
| 2157 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2158 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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|
2159 AddAttachmentDocumentation(call, r); |
| 4409 | 2160 call.GetDocumentation() |
| 2161 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2162 .SetSummary("Get size of attachment") | |
| 2163 .SetDescription("Get the size of one attachment associated with the given " + r) | |
| 2164 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
| 2165 return; | |
| 2166 } | |
| 2167 | |
|
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|
2168 FileInfo info; |
|
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|
2169 if (GetAttachmentInfo(info, call)) |
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|
2170 { |
|
2908
9d277f8ad698
new enumeration: MimeType
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2905
diff
changeset
|
2171 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
|
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|
2172 } |
|
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2173 } |
|
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|
2174 |
|
4883
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4880
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|
2175 static void GetAttachmentInfo(RestApiGetCall& call) |
|
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changeset
|
2176 { |
|
504624b0a062
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|
2177 if (call.IsDocumentation()) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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changeset
|
2178 { |
|
504624b0a062
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changeset
|
2179 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
504624b0a062
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|
2180 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
504624b0a062
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changeset
|
2181 AddAttachmentDocumentation(call, r); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2182 call.GetDocumentation() |
|
504624b0a062
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2183 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2184 .SetSummary("Get info about the attachment") |
|
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|
2185 .SetDescription("Get all the information about the attachment associated with the given " + r) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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2186 .AddAnswerType(MimeType_Json, "JSON object containing the information about the attachment") |
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2187 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/dicom/info", true); |
|
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2188 return; |
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2189 } |
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|
2190 |
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|
2191 FileInfo info; |
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2192 if (GetAttachmentInfo(info, call)) |
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2193 { |
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2194 Json::Value result = Json::objectValue; |
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2195 result["Uuid"] = info.GetUuid(); |
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2196 result["ContentType"] = info.GetContentType(); |
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2197 result["UncompressedSize"] = Json::Value::UInt64(info.GetUncompressedSize()); |
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2198 result["CompressedSize"] = Json::Value::UInt64(info.GetCompressedSize()); |
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2199 result["UncompressedMD5"] = info.GetUncompressedMD5(); |
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2200 result["CompressedMD5"] = info.GetCompressedMD5(); |
|
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2201 |
|
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|
2202 call.GetOutput().AnswerJson(result); |
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2203 } |
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2204 } |
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2205 |
| 974 | 2206 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
|
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2207 { |
| 4409 | 2208 if (call.IsDocumentation()) |
| 2209 { | |
| 2210 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2211 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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2212 AddAttachmentDocumentation(call, r); |
| 4409 | 2213 call.GetDocumentation() |
| 2214 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 4410 | 2215 .SetSummary("Get size of attachment on disk") |
| 4409 | 2216 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
| 4413 | 2217 "This is different from `.../size` iff `EnableStorage` is `true`.") |
| 4410 | 2218 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
| 4409 | 2219 return; |
| 2220 } | |
| 2221 | |
|
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2222 FileInfo info; |
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2223 if (GetAttachmentInfo(info, call)) |
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2224 { |
|
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2225 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
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2226 } |
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2227 } |
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|
2228 |
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2229 |
| 974 | 2230 static void GetAttachmentMD5(RestApiGetCall& call) |
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2231 { |
| 4410 | 2232 if (call.IsDocumentation()) |
| 2233 { | |
| 2234 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2235 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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2236 AddAttachmentDocumentation(call, r); |
| 4410 | 2237 call.GetDocumentation() |
| 2238 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2239 .SetSummary("Get MD5 of attachment") | |
| 2240 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
| 2241 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
| 2242 return; | |
| 2243 } | |
| 2244 | |
|
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2245 FileInfo info; |
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2246 if (GetAttachmentInfo(info, call) && |
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2247 info.GetUncompressedMD5() != "") |
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2248 { |
|
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2249 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
|
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2250 } |
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|
2251 } |
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2252 |
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2253 |
| 974 | 2254 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
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2255 { |
| 4410 | 2256 if (call.IsDocumentation()) |
| 2257 { | |
| 2258 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2259 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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2260 AddAttachmentDocumentation(call, r); |
| 4410 | 2261 call.GetDocumentation() |
| 2262 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2263 .SetSummary("Get MD5 of attachment on disk") | |
| 2264 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
| 4413 | 2265 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
| 4410 | 2266 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
| 2267 return; | |
| 2268 } | |
| 2269 | |
|
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2270 FileInfo info; |
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2271 if (GetAttachmentInfo(info, call) && |
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2272 info.GetCompressedMD5() != "") |
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2273 { |
|
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2274 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
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2275 } |
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2276 } |
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2277 |
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|
2278 |
| 974 | 2279 static void VerifyAttachment(RestApiPostCall& call) |
|
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2280 { |
| 4410 | 2281 if (call.IsDocumentation()) |
| 2282 { | |
| 2283 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2284 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2285 call.GetDocumentation() | |
| 2286 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2287 .SetSummary("Verify attachment") | |
| 2288 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
| 2289 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2290 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 2291 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
| 2292 return; | |
| 2293 } | |
| 2294 | |
|
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2295 ServerContext& context = OrthancRestApi::GetContext(call); |
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2296 CheckValidResourceType(call); |
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|
2297 |
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2298 std::string publicId = call.GetUriComponent("id", ""); |
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2299 std::string name = call.GetUriComponent("name", ""); |
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2300 FileContentType contentType = StringToContentType(name); |
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2301 |
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2302 FileInfo info; |
|
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2303 int64_t revision; // Ignored |
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2304 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
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2305 info.GetCompressedMD5() == "" || |
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2306 info.GetUncompressedMD5() == "") |
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2307 { |
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2308 // Inexistent resource, or no MD5 available |
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2309 return; |
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2310 } |
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2311 |
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2312 bool ok = false; |
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2313 |
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2314 // First check whether the compressed data is correctly stored in the disk |
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2315 std::string data; |
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2316 context.ReadAttachment(data, revision, publicId, StringToContentType(name), false); |
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2317 |
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2318 std::string actualMD5; |
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2319 Toolbox::ComputeMD5(actualMD5, data); |
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2320 |
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2321 if (actualMD5 == info.GetCompressedMD5()) |
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2322 { |
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2323 // The compressed data is OK. If a compression algorithm was |
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2324 // applied to it, now check the MD5 of the uncompressed data. |
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2325 if (info.GetCompressionType() == CompressionType_None) |
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2326 { |
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2327 ok = true; |
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2328 } |
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2329 else |
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2330 { |
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2331 context.ReadAttachment(data, revision, publicId, StringToContentType(name), true); |
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|
2332 Toolbox::ComputeMD5(actualMD5, data); |
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|
2333 ok = (actualMD5 == info.GetUncompressedMD5()); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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2334 } |
|
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|
2335 } |
|
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|
2336 |
|
5197fd35333c
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|
2337 if (ok) |
|
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|
2338 { |
|
4294
0923247e69f6
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Alain Mazy <alain@mazy.be>
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4272
diff
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|
2339 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
|
2908
9d277f8ad698
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Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
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|
2340 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2341 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2342 else |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2343 { |
|
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Alain Mazy <alain@mazy.be>
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4272
diff
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|
2344 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
|
751
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|
2345 } |
|
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|
2346 } |
|
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|
2347 |
|
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|
2348 |
| 974 | 2349 static void UploadAttachment(RestApiPutCall& call) |
|
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|
2350 { |
| 4414 | 2351 if (call.IsDocumentation()) |
| 2352 { | |
| 2353 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2354 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2355 call.GetDocumentation() | |
| 2356 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2357 .SetSummary("Set attachment") | |
| 2358 .SetDescription("Attach a file to the given DICOM " + r + | |
| 2359 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
| 2360 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 2361 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
| 2362 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
|
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|
2363 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
|
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|
2364 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
| 4414 | 2365 return; |
| 2366 } | |
| 2367 | |
|
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|
2368 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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|
2369 CheckValidResourceType(call); |
|
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|
2370 |
|
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|
2371 std::string publicId = call.GetUriComponent("id", ""); |
|
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|
2372 std::string name = call.GetUriComponent("name", ""); |
|
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|
2373 |
|
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|
2374 FileContentType contentType = StringToContentType(name); |
|
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|
2375 if (IsUserContentType(contentType)) // It is forbidden to modify internal attachments |
|
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|
2376 { |
|
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|
2377 int64_t oldRevision; |
|
4640
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|
2378 std::string oldMD5; |
|
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|
2379 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
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|
2380 |
|
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|
2381 if (!hasOldRevision) |
|
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|
2382 { |
|
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|
2383 OrthancConfiguration::ReaderLock lock; |
|
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|
2384 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
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|
2385 { |
|
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|
2386 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
|
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|
2387 // the actual value of "oldRevision" if the metadata is |
|
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|
2388 // inexistent as expected |
|
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|
2389 hasOldRevision = true; |
|
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|
2390 oldRevision = -1; // dummy value |
|
4640
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4627
diff
changeset
|
2391 oldMD5.clear(); // dummy value |
|
4627
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|
2392 } |
|
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|
2393 } |
|
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|
2394 |
|
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|
2395 int64_t newRevision; |
|
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4623
diff
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|
2396 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
|
4640
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2397 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2398 |
|
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2399 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
|
2908
9d277f8ad698
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Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
2400 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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5197fd35333c
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|
2401 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
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|
2402 else |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
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|
2403 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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2127
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changeset
|
2404 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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2127
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|
2405 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2406 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2407 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2408 |
| 974 | 2409 static void DeleteAttachment(RestApiDeleteCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
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|
2410 { |
| 4413 | 2411 if (call.IsDocumentation()) |
| 2412 { | |
| 2413 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2414 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2415 call.GetDocumentation() | |
| 2416 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2417 .SetSummary("Delete attachment") | |
| 4414 | 2418 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
| 2419 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
| 4413 | 2420 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4627
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2421 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
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|
2422 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2423 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4413 | 2424 return; |
| 2425 } | |
| 2426 | |
|
751
5197fd35333c
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diff
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|
2427 CheckValidResourceType(call); |
|
5197fd35333c
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diff
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|
2428 |
|
5197fd35333c
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diff
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|
2429 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2430 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
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parents:
diff
changeset
|
2431 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
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parents:
diff
changeset
|
2432 |
|
2128
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2127
diff
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|
2433 bool allowed; |
|
9329ba17a069
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2127
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|
2434 if (IsUserContentType(contentType)) |
|
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|
2435 { |
|
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|
2436 allowed = true; |
|
9329ba17a069
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|
2437 } |
|
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|
2438 else |
|
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|
2439 { |
|
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2935
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|
2440 OrthancConfiguration::ReaderLock lock; |
|
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|
2441 |
|
4767d36679ed
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2935
diff
changeset
|
2442 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
|
4767d36679ed
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diff
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|
2443 contentType == FileContentType_DicomAsJson) |
|
4767d36679ed
refactoring access to Orthanc configuration
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|
2444 { |
|
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diff
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|
2445 allowed = true; |
|
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|
2446 } |
|
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|
2447 else |
|
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refactoring access to Orthanc configuration
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|
2448 { |
|
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|
2449 // It is forbidden to delete internal attachments, except for |
|
4767d36679ed
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|
2450 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
|
4767d36679ed
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|
2451 // would be automatically reconstructed on the next GET call) |
|
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|
2452 allowed = false; |
|
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|
2453 } |
|
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|
2454 } |
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|
2455 |
|
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|
2456 if (allowed) |
|
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|
2457 { |
|
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|
2458 bool found; |
|
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|
2459 int64_t revision; |
|
4640
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changeset
|
2460 std::string md5; |
|
66109d24d26e
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4627
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changeset
|
2461 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
4627
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diff
changeset
|
2462 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2463 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2464 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2465 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2466 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2467 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2468 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2469 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2470 throw OrthancException(ErrorCode_Revision, |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2471 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2472 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2473 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2474 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2475 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2476 false, -1 /* dummy value */, "" /* dummy value */); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2477 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2478 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2479 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2480 if (found) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2481 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2482 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2483 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2484 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2485 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2486 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2487 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2488 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2489 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2490 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2491 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2492 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2493 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2494 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2495 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2496 template <enum CompressionType compression> |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2497 static void ChangeAttachmentCompression(RestApiPostCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2498 { |
| 4413 | 2499 if (call.IsDocumentation()) |
| 2500 { | |
| 2501 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2502 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2503 call.GetDocumentation() | |
| 2504 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2505 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
| 2506 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
| 2507 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2508 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
| 4413 | 2509 return; |
| 2510 } | |
| 2511 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2512 CheckValidResourceType(call); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2513 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2514 std::string publicId = call.GetUriComponent("id", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2515 std::string name = call.GetUriComponent("name", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2516 FileContentType contentType = StringToContentType(name); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2517 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2518 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2519 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2520 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2521 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2522 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2523 static void IsAttachmentCompressed(RestApiGetCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2524 { |
| 4413 | 2525 if (call.IsDocumentation()) |
| 2526 { | |
| 2527 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2528 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2529 AddAttachmentDocumentation(call, r); |
| 4413 | 2530 call.GetDocumentation() |
| 2531 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2532 .SetSummary("Is attachment compressed?") | |
| 2533 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
| 2534 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
| 2535 return; | |
| 2536 } | |
| 2537 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2538 FileInfo info; |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2539 if (GetAttachmentInfo(info, call)) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2540 { |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2541 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2542 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2543 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2544 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2545 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2546 |
| 782 | 2547 // Raw access to the DICOM tags of an instance ------------------------------ |
| 2548 | |
| 974 | 2549 static void GetRawContent(RestApiGetCall& call) |
| 782 | 2550 { |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2551 if (call.IsDocumentation()) |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2552 { |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2553 call.GetDocumentation() |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2554 .SetTag("Instances") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2555 .SetSummary("Get raw tag") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2556 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2557 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2558 .SetUriArgument("...", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2559 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2560 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2561 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2562 "or JSON array containing the list of available tags if accessing a dataset"); |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2563 return; |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2564 } |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2565 |
| 782 | 2566 std::string id = call.GetUriComponent("id", ""); |
| 2567 | |
| 2568 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
| 2569 | |
| 2570 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
| 2571 } | |
| 2572 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2573 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2574 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2575 static bool ExtractSharedTags(Json::Value& shared, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2576 ServerContext& context, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2577 const std::string& publicId) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2578 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2579 // Retrieve all the instances of this patient/study/series |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2580 typedef std::list<std::string> Instances; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2581 Instances instances; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2582 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2583 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2584 // Loop over the instances |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2585 bool isFirst = true; |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2586 shared = Json::objectValue; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2587 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2588 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2589 it != instances.end(); ++it) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2590 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2591 // Get the tags of the current instance, in the simplified format |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2592 Json::Value tags; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2593 |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2594 try |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2595 { |
| 2124 | 2596 context.ReadDicomAsJson(tags, *it); |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2597 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2598 catch (OrthancException&) |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2599 { |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2600 // Race condition: This instance has been removed since |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2601 // (*). Ignore this instance. |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2602 continue; |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2603 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2604 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2605 if (tags.type() != Json::objectValue) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2606 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2607 return false; // Error |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2608 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2609 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2610 // Only keep the tags that are mapped to a string |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2611 Json::Value::Members members = tags.getMemberNames(); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2612 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2613 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2614 const Json::Value& tag = tags[members[i]]; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2615 if (tag.type() != Json::objectValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2616 tag["Type"].type() != Json::stringValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2617 tag["Type"].asString() != "String") |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2618 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2619 tags.removeMember(members[i]); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2620 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2621 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2622 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2623 if (isFirst) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2624 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2625 // This is the first instance, keep its tags as such |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2626 shared = tags; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2627 isFirst = false; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2628 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2629 else |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2630 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2631 // Loop over all the members of the shared tags extracted so |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2632 // far. If the value of one of these tags does not match its |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2633 // value in the current instance, remove it. |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2634 members = shared.getMemberNames(); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2635 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2636 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2637 if (!tags.isMember(members[i]) || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2638 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2639 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2640 shared.removeMember(members[i]); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2641 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2642 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2643 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2644 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2645 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2646 return true; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2647 } |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2648 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2649 |
| 974 | 2650 static void GetSharedTags(RestApiGetCall& call) |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2651 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2652 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2653 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2654 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2655 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2656 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2657 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2658 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2659 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2660 .SetSummary("Get shared tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2661 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2662 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2663 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2664 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2665 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2666 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2667 } |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2668 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2669 ServerContext& context = OrthancRestApi::GetContext(call); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2670 std::string publicId = call.GetUriComponent("id", ""); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2671 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2672 Json::Value sharedTags; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2673 if (ExtractSharedTags(sharedTags, context, publicId)) |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2674 { |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2675 // Success: Send the value of the shared tags |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2676 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2677 } |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2678 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2679 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2680 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2681 template <enum ResourceType resourceType, |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2682 enum DicomModule module> |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2683 static void GetModule(RestApiGetCall& call) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2684 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2685 if (call.IsDocumentation()) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2686 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2687 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2688 std::string m; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2689 switch (module) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2690 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2691 case DicomModule_Patient: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2692 m = "patient"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2693 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2694 case DicomModule_Study: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2695 m = "study"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2696 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2697 case DicomModule_Series: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2698 m = "series"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2699 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2700 case DicomModule_Instance: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2701 m = "instance"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2702 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2703 default: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2704 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2705 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2706 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2707 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2708 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2709 call.GetDocumentation() |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2710 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2711 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2712 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2713 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2714 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2715 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2716 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2717 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2718 return; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2719 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2720 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2721 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2722 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2723 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2724 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2725 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2726 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
|
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2727 { |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2728 throw OrthancException(ErrorCode_NotImplemented); |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2729 } |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2730 |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2731 ServerContext& context = OrthancRestApi::GetContext(call); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2732 std::string publicId = call.GetUriComponent("id", ""); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2733 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2734 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2735 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2736 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2737 typedef std::set<DicomTag> ModuleTags; |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2738 ModuleTags moduleTags; |
| 1368 | 2739 DicomTag::AddTagsForModule(moduleTags, module); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2740 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2741 Json::Value tags; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2742 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2743 if (resourceType != ResourceType_Instance) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2744 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2745 // Retrieve all the instances of this patient/study/series |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2746 typedef std::list<std::string> Instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2747 Instances instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2748 context.GetIndex().GetChildInstances(instances, publicId); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2749 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2750 if (instances.empty()) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2751 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2752 return; // Error: No instance (should never happen) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2753 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2754 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2755 // Select one child instance |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2756 publicId = instances.front(); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2757 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2758 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2759 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2760 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2761 // Filter the tags of the instance according to the module |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2762 Json::Value result = Json::objectValue; |
| 1303 | 2763 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2764 { |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2765 std::string s = tag->Format(); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2766 if (tags.isMember(s)) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2767 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2768 result[s] = tags[s]; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2769 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2770 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2771 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2772 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2773 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2774 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2775 |
| 1722 | 2776 namespace |
| 2777 { | |
| 2778 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
| 2779 } | |
| 2780 | |
| 2781 | |
| 2782 static void AccumulateLookupResults(LookupResults& result, | |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2783 ServerIndex& index, |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2784 const DicomTag& tag, |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2785 const std::string& value, |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2786 ResourceType level) |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2787 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2788 std::vector<std::string> tmp; |
|
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
2789 index.LookupIdentifierExact(tmp, level, tag, value); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2790 |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2791 for (size_t i = 0; i < tmp.size(); i++) |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2792 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2793 result.push_back(std::make_pair(level, tmp[i])); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2794 } |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2795 } |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2796 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2797 |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2798 static void Lookup(RestApiPostCall& call) |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2799 { |
| 4422 | 2800 if (call.IsDocumentation()) |
| 2801 { | |
| 2802 call.GetDocumentation() | |
| 2803 .SetTag("System") | |
| 2804 .SetSummary("Look for DICOM identifiers") | |
| 2805 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
| 2806 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
| 2807 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
| 2808 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
| 2809 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
| 2810 "DICOM resource that is stored by Orthanc"); | |
| 2811 return; | |
| 2812 } | |
| 2813 | |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
2814 std::string tag; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
2815 call.BodyToString(tag); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2816 |
| 1722 | 2817 LookupResults resources; |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2818 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2819 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2820 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2821 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2822 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
|
1718
2b812969e136
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parents:
1703
diff
changeset
|
2823 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2824 Json::Value result = Json::arrayValue; |
| 1722 | 2825 for (LookupResults::const_iterator |
|
1718
2b812969e136
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parents:
1703
diff
changeset
|
2826 it = resources.begin(); it != resources.end(); ++it) |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2827 { |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
1054
diff
changeset
|
2828 ResourceType type = it->first; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2829 const std::string& id = it->second; |
|
f167b672db94
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2830 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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diff
changeset
|
2831 Json::Value item = Json::objectValue; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
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|
2832 item["Type"] = EnumerationToString(type); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2833 item["ID"] = id; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2834 item["Path"] = GetBasePath(type, id); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2835 |
|
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/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
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|
2836 result.append(item); |
|
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/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
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|
2837 } |
|
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parents:
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diff
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|
2838 |
|
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/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2839 call.GetOutput().AnswerJson(result); |
|
f167b672db94
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diff
changeset
|
2840 } |
|
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diff
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|
2841 |
|
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diff
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|
2842 |
|
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7695a9c81099
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diff
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|
2843 namespace |
|
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refactoring /tools/find using LookupResource::IVisitor
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|
2844 { |
|
3021
2cbafb5d5a62
renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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3012
diff
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|
2845 class FindVisitor : public ServerContext::ILookupVisitor |
|
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|
2846 { |
|
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|
2847 private: |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
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|
2848 bool isComplete_; |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2849 std::list<std::string> resources_; |
|
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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4936
diff
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|
2850 |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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|
2851 // cache the data we used during lookup and that we could reuse when building the answers |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2852 std::map<std::string, std::string> instancesIds_; // the id of an instance for each found resource. |
|
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include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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|
2853 std::map<std::string, boost::shared_ptr<DicomMap> > resourcesMainDicomTags_; // all tags read from DB for a resource (current level and upper levels) |
|
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
parents:
4936
diff
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|
2854 std::map<std::string, Json::Value> resourcesDicomAsJson_; // the dicom-as-json for a resource |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2855 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
4694
diff
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|
2856 DicomToJsonFormat format_; |
|
3001
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|
2857 |
|
7695a9c81099
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diff
changeset
|
2858 public: |
| 4716 | 2859 explicit FindVisitor(DicomToJsonFormat format) : |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2860 isComplete_(false), |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2861 format_(format) |
|
3001
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|
2862 { |
|
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parents:
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|
2863 } |
| 4205 | 2864 |
| 2865 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
|
3012
af1530b45290
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parents:
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|
2866 { |
|
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2867 return false; // (*) |
|
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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3003
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|
2868 } |
|
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2869 |
| 4205 | 2870 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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|
2871 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2872 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
|
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refactoring /tools/find using LookupResource::IVisitor
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|
2873 } |
|
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refactoring /tools/find using LookupResource::IVisitor
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|
2874 |
|
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refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2875 virtual void Visit(const std::string& publicId, |
|
4937
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Alain Mazy <am@osimis.io>
parents:
4936
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|
2876 const std::string& instanceId, |
|
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
parents:
4936
diff
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|
2877 const DicomMap& mainDicomTags, |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
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|
2878 const Json::Value* dicomAsJson) ORTHANC_OVERRIDE |
|
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|
2879 { |
|
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parents:
2998
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|
2880 resources_.push_back(publicId); |
|
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
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|
2881 instancesIds_[publicId] = instanceId; |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
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|
2882 resourcesMainDicomTags_[publicId].reset(mainDicomTags.Clone()); |
|
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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|
2883 resourcesDicomAsJson_[publicId] = dicomAsJson; |
|
3001
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|
2884 } |
|
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|
2885 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2886 void Answer(RestApiOutput& output, |
|
4935
acd3f72e2a21
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Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
2887 ServerContext& context, |
|
3001
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2888 ResourceType level, |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
2889 bool expand, |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
2890 const std::set<DicomTag>& requestedTags) const |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2891 { |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
2892 AnswerListOfResources(output, context, resources_, level, expand, format_, requestedTags); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
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|
2893 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
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|
2894 }; |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
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|
2895 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
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|
2896 |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2897 |
| 1354 | 2898 static void Find(RestApiPostCall& call) |
| 2899 { | |
| 2998 | 2900 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
| 2901 static const char* const KEY_EXPAND = "Expand"; | |
| 2902 static const char* const KEY_LEVEL = "Level"; | |
| 2903 static const char* const KEY_LIMIT = "Limit"; | |
| 2904 static const char* const KEY_QUERY = "Query"; | |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
2905 static const char* const KEY_REQUESTED_TAGS = "RequestedTags"; |
| 2998 | 2906 static const char* const KEY_SINCE = "Since"; |
| 2907 | |
| 4421 | 2908 if (call.IsDocumentation()) |
| 2909 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
2910 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
2911 |
| 4421 | 2912 call.GetDocumentation() |
| 2913 .SetTag("System") | |
| 2914 .SetSummary("Look for local resources") | |
| 2915 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
| 2916 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
| 2917 "https://book.orthanc-server.com/users/rest.html#performing-finds-within-orthanc") | |
| 2918 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, | |
| 2919 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
| 2920 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
| 2921 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
| 2922 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
| 2923 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
| 2924 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
| 2925 "Limit the number of reported resources", false) | |
| 2926 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
| 2927 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
|
4935
acd3f72e2a21
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parents:
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diff
changeset
|
2928 .SetRequestField(KEY_REQUESTED_TAGS, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
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diff
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|
2929 "A list of DICOM tags to include in the response (applicable only if \"Expand\" is set to true). " |
|
acd3f72e2a21
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Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
2930 "The tags requested tags are returned in the 'RequestedTags' field in the response. " |
|
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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diff
changeset
|
2931 "Note that, if you are requesting tags that are not listed in the Main Dicom Tags stored in DB, building the response " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
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diff
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|
2932 "might be slow since Orthanc will need to access the DICOM files. If not specified, Orthanc will return " |
|
acd3f72e2a21
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parents:
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diff
changeset
|
2933 "all Main Dicom Tags to keep backward compatibility with Orthanc prior to 1.11.0.", false) |
| 4421 | 2934 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, |
| 2935 "Associative array containing the filter on the values of the DICOM tags", true) | |
| 2936 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " | |
| 2937 "about the reported resources (if `Expand` argument is `true`)"); | |
| 2938 return; | |
| 2939 } | |
| 2940 | |
| 1358 | 2941 ServerContext& context = OrthancRestApi::GetContext(call); |
| 1354 | 2942 |
| 2943 Json::Value request; | |
|
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|
2944 if (!call.ParseJsonRequest(request) || |
|
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|
2945 request.type() != Json::objectValue) |
|
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|
2946 { |
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|
2947 throw OrthancException(ErrorCode_BadRequest, |
|
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|
2948 "The body must contain a JSON object"); |
|
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refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2949 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2950 else if (!request.isMember(KEY_LEVEL) || |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2951 request[KEY_LEVEL].type() != Json::stringValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2952 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2953 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2954 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2955 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2956 else if (!request.isMember(KEY_QUERY) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2957 request[KEY_QUERY].type() != Json::objectValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2958 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2959 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2960 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2961 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2962 else if (request.isMember(KEY_CASE_SENSITIVE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2963 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2964 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2965 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2966 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" should be a Boolean"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2967 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2968 else if (request.isMember(KEY_LIMIT) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2969 request[KEY_LIMIT].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2970 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2971 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2972 "Field \"" + std::string(KEY_LIMIT) + "\" should be an integer"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2973 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2974 else if (request.isMember(KEY_SINCE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2975 request[KEY_SINCE].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2976 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2977 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2978 "Field \"" + std::string(KEY_SINCE) + "\" should be an integer"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2979 } |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
2980 else if (request.isMember(KEY_REQUESTED_TAGS) && |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
2981 request[KEY_REQUESTED_TAGS].type() != Json::arrayValue) |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
2982 { |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
2983 throw OrthancException(ErrorCode_BadRequest, |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
2984 "Field \"" + std::string(KEY_REQUESTED_TAGS) + "\" should be an array"); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
2985 } |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2986 else |
| 1354 | 2987 { |
| 2988 bool expand = false; | |
| 2998 | 2989 if (request.isMember(KEY_EXPAND)) |
| 1354 | 2990 { |
| 2998 | 2991 expand = request[KEY_EXPAND].asBool(); |
| 1354 | 2992 } |
| 2993 | |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2994 bool caseSensitive = false; |
| 2998 | 2995 if (request.isMember(KEY_CASE_SENSITIVE)) |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2996 { |
| 2998 | 2997 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2998 } |
|
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2999 |
| 1758 | 3000 size_t limit = 0; |
| 2998 | 3001 if (request.isMember(KEY_LIMIT)) |
| 1758 | 3002 { |
| 2998 | 3003 int tmp = request[KEY_LIMIT].asInt(); |
| 1847 | 3004 if (tmp < 0) |
| 1758 | 3005 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3006 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3007 "Field \"" + std::string(KEY_LIMIT) + "\" should be a positive integer"); |
| 1758 | 3008 } |
| 1847 | 3009 |
| 3010 limit = static_cast<size_t>(tmp); | |
| 1758 | 3011 } |
| 3012 | |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3013 size_t since = 0; |
| 2998 | 3014 if (request.isMember(KEY_SINCE)) |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3015 { |
| 2998 | 3016 int tmp = request[KEY_SINCE].asInt(); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3017 if (tmp < 0) |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3018 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3019 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3020 "Field \"" + std::string(KEY_SINCE) + "\" should be a positive integer"); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3021 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3022 |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3023 since = static_cast<size_t>(tmp); |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3024 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3025 |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3026 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3027 |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3028 if (request.isMember(KEY_REQUESTED_TAGS)) |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3029 { |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3030 FromDcmtkBridge::ParseListOfTags(requestedTags, request[KEY_REQUESTED_TAGS]); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3031 } |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3032 |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3033 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
| 1360 | 3034 |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3035 DatabaseLookup query; |
| 1358 | 3036 |
| 2998 | 3037 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
| 1354 | 3038 for (size_t i = 0; i < members.size(); i++) |
| 3039 { | |
| 2998 | 3040 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
| 1354 | 3041 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3042 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3043 "Tag \"" + members[i] + "\" should be associated with a string"); |
| 1354 | 3044 } |
| 3045 | |
|
3163
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3046 const std::string value = request[KEY_QUERY][members[i]].asString(); |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3047 |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3048 if (!value.empty()) |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3049 { |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3050 // An empty string corresponds to an universal constraint, |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3051 // so we ignore it. This mimics the behavior of class |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3052 // "OrthancFindRequestHandler" |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3053 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3054 value, caseSensitive, true); |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3055 } |
|
1361
94ffb597d297
refactoring of C-Find SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1360
diff
changeset
|
3056 } |
| 2876 | 3057 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3058 FindVisitor visitor(OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human)); |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3059 context.Apply(visitor, query, level, since, limit); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3060 visitor.Answer(call.GetOutput(), context, level, expand, requestedTags); |
| 1354 | 3061 } |
| 3062 } | |
| 3063 | |
| 3064 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3065 template <enum ResourceType start, |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3066 enum ResourceType end> |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3067 static void GetChildResources(RestApiGetCall& call) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3068 { |
| 4415 | 3069 if (call.IsDocumentation()) |
| 3070 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3071 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3072 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3073 |
| 4415 | 3074 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
| 3075 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3076 call.GetDocumentation() | |
| 3077 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3078 .SetSummary("Get child " + children) | |
| 3079 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
|
4416
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openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3080 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3081 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 3082 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) | |
| 3083 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
| 3084 return; | |
| 3085 } | |
| 3086 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3087 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3088 |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3089 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3090 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3091 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3092 std::list<std::string> a, b, c; |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3093 a.push_back(call.GetUriComponent("id", "")); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3094 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3095 ResourceType type = start; |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3096 while (type != end) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3097 { |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3098 b.clear(); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3099 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3100 for (std::list<std::string>::const_iterator |
| 1303 | 3101 it = a.begin(); it != a.end(); ++it) |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3102 { |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3103 index.GetChildren(c, *it); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3104 b.splice(b.begin(), c); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3105 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3106 |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3107 type = GetChildResourceType(type); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3108 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3109 a.clear(); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3110 a.splice(a.begin(), b); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3111 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3112 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3113 Json::Value result = Json::arrayValue; |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3114 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3115 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3116 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3117 for (std::list<std::string>::const_iterator |
| 1303 | 3118 it = a.begin(); it != a.end(); ++it) |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3119 { |
| 4554 | 3120 Json::Value resource; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3121 if (OrthancRestApi::GetContext(call).ExpandResource(resource, *it, end, format, requestedTags)) |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3122 { |
| 4554 | 3123 result.append(resource); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3124 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3125 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3126 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3127 call.GetOutput().AnswerJson(result); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3128 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3129 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3130 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3131 static void GetChildInstancesTags(RestApiGetCall& call) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3132 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3133 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3134 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3135 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3136 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3137 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3138 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3139 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3140 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3141 .SetSummary("Get tags of instances") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3142 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3143 " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3144 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3145 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3146 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3147 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3148 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3149 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3150 } |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3151 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3152 ServerContext& context = OrthancRestApi::GetContext(call); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3153 std::string publicId = call.GetUriComponent("id", ""); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3154 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3155 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3156 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3157 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3158 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3159 // Retrieve all the instances of this patient/study/series |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3160 typedef std::list<std::string> Instances; |
|
a921e3b5e763
bulk tags retrieval
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1146
diff
changeset
|
3161 Instances instances; |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3162 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3163 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3164 |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
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1172
diff
changeset
|
3165 Json::Value result = Json::objectValue; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3166 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3167 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 3168 it != instances.end(); ++it) |
|
1166
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diff
changeset
|
3169 { |
|
a921e3b5e763
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diff
changeset
|
3170 Json::Value full; |
|
2409
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ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
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2408
diff
changeset
|
3171 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
|
1166
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diff
changeset
|
3172 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3173 if (format != DicomToJsonFormat_Full) |
|
1166
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changeset
|
3174 { |
|
a921e3b5e763
bulk tags retrieval
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diff
changeset
|
3175 Json::Value simplified; |
|
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
3176 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
|
1201
09aa7c126be9
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1172
diff
changeset
|
3177 result[*it] = simplified; |
|
1166
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|
3178 } |
|
a921e3b5e763
bulk tags retrieval
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diff
changeset
|
3179 else |
|
a921e3b5e763
bulk tags retrieval
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parents:
1146
diff
changeset
|
3180 { |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3181 result[*it] = full; |
|
1166
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diff
changeset
|
3182 } |
|
a921e3b5e763
bulk tags retrieval
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diff
changeset
|
3183 } |
|
a921e3b5e763
bulk tags retrieval
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diff
changeset
|
3184 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3185 call.GetOutput().AnswerJson(result); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3186 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3187 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3188 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3189 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3190 template <enum ResourceType start, |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3191 enum ResourceType end> |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3192 static void GetParentResource(RestApiGetCall& call) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3193 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3194 assert(start > end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3195 |
| 4415 | 3196 if (call.IsDocumentation()) |
| 3197 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3198 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3199 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3200 |
| 4415 | 3201 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
| 3202 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3203 call.GetDocumentation() | |
| 3204 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3205 .SetSummary("Get parent " + parent) | |
| 3206 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3207 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3208 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 3209 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
| 3210 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
| 3211 return; | |
| 3212 } | |
| 3213 | |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3214 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3215 |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3216 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3217 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3218 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3219 std::string current = call.GetUriComponent("id", ""); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3220 ResourceType currentType = start; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3221 while (currentType > end) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3222 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3223 std::string parent; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3224 if (!index.LookupParent(parent, current)) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3225 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3226 // Error that could happen if the resource gets deleted by |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3227 // another concurrent call |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3228 return; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3229 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3230 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3231 current = parent; |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3232 currentType = GetParentResourceType(currentType); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3233 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3234 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3235 assert(currentType == end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3236 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3237 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3238 |
| 4554 | 3239 Json::Value resource; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3240 if (OrthancRestApi::GetContext(call).ExpandResource(resource, current, end, format, requestedTags)) |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3241 { |
| 4554 | 3242 call.GetOutput().AnswerJson(resource); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3243 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3244 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3245 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3246 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3247 static void ExtractPdf(RestApiGetCall& call) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3248 { |
| 4407 | 3249 if (call.IsDocumentation()) |
| 3250 { | |
| 3251 call.GetDocumentation() | |
| 3252 .SetTag("Instances") | |
| 3253 .SetSummary("Get embedded PDF") | |
| 3254 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
| 3255 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
| 3256 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
| 3257 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
| 3258 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
| 3259 return; | |
| 3260 } | |
| 3261 | |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3262 const std::string id = call.GetUriComponent("id", ""); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3263 std::string pdf; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3264 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3265 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3266 if (locker.GetDicom().ExtractPdf(pdf)) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3267 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3268 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3269 return; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3270 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3271 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3272 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3273 |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3274 static void OrderSlices(RestApiGetCall& call) |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3275 { |
| 4421 | 3276 if (call.IsDocumentation()) |
| 3277 { | |
| 3278 call.GetDocumentation() | |
| 3279 .SetDeprecated() | |
| 3280 .SetTag("Series") | |
| 3281 .SetSummary("Order the slices") | |
| 3282 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
| 3283 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
| 3284 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
| 3285 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3286 "Ordered list of paths to DICOM instances") | |
| 3287 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3288 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
| 3289 "in the case of multiframe images.") | |
| 3290 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
| 3291 "Same information as the `Slices` field, but in a compact form") | |
| 3292 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
| 3293 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
| 3294 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); | |
| 3295 return; | |
| 3296 } | |
| 3297 | |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3298 const std::string id = call.GetUriComponent("id", ""); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3299 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3300 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3301 SliceOrdering ordering(index, id); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3302 |
|
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3303 Json::Value result; |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3304 ordering.Format(result); |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3305 call.GetOutput().AnswerJson(result); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3306 } |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3307 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3308 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3309 static void GetInstanceHeader(RestApiGetCall& call) |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3310 { |
| 4404 | 3311 if (call.IsDocumentation()) |
| 3312 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3313 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 3314 call.GetDocumentation() |
| 3315 .SetTag("Instances") | |
| 3316 .SetSummary("Get DICOM meta-header") | |
| 3317 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
| 3318 "combines hexadecimal tags with human-readable description.") | |
| 3319 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 3320 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
| 3321 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); | |
| 3322 return; | |
| 3323 } | |
| 3324 | |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3325 ServerContext& context = OrthancRestApi::GetContext(call); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3326 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3327 std::string publicId = call.GetUriComponent("id", ""); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3328 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3329 std::string dicomContent; |
|
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
3330 context.ReadDicomForHeader(dicomContent, publicId); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3331 |
|
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3332 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3333 // speed up things here |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3334 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3335 ParsedDicomFile dicom(dicomContent); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3336 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3337 Json::Value header; |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3338 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3339 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3340 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3341 } |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3342 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3343 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3344 static void InvalidateTags(RestApiPostCall& call) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3345 { |
| 4420 | 3346 if (call.IsDocumentation()) |
| 3347 { | |
| 3348 call.GetDocumentation() | |
| 3349 .SetTag("System") | |
| 3350 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
| 3351 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
| 3352 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
| 3353 "This is notably useful after changes to the `Dictionary` configuration option. " | |
| 3354 "https://book.orthanc-server.com/faq/orthanc-storage.html#storage-area"); | |
| 3355 return; | |
| 3356 } | |
| 3357 | |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3358 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3359 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3360 // Loop over the instances, grouping them by parent studies so as |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3361 // to avoid large memory consumption |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3362 std::list<std::string> studies; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3363 index.GetAllUuids(studies, ResourceType_Study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3364 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3365 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3366 study = studies.begin(); study != studies.end(); ++study) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3367 { |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3368 std::list<std::string> instances; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3369 index.GetChildInstances(instances, *study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3370 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3371 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3372 instance = instances.begin(); instance != instances.end(); ++instance) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3373 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3374 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3375 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3376 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3377 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3378 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3379 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3380 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3381 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3382 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3383 template <enum ResourceType type> |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3384 static void ReconstructResource(RestApiPostCall& call) |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3385 { |
| 4420 | 3386 if (call.IsDocumentation()) |
| 3387 { | |
| 3388 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
| 3389 call.GetDocumentation() | |
| 3390 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
| 3391 .SetSummary("Reconstruct tags of " + resource) | |
| 3392 .SetDescription("Reconstruct the main DICOM tags of the " + resource + " whose Orthanc identifier is provided " | |
| 3393 "in the URL. This is useful if child studies/series/instances have inconsistent values for " | |
| 3394 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
| 3395 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
| 3396 "parsed again, and the Orthanc index will be updated accordingly.") | |
| 3397 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
| 3398 return; | |
| 3399 } | |
| 3400 | |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3401 ServerContext& context = OrthancRestApi::GetContext(call); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3402 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", "")); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3403 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3404 } |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3405 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3406 |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3407 static void ReconstructAllResources(RestApiPostCall& call) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3408 { |
| 4420 | 3409 if (call.IsDocumentation()) |
| 3410 { | |
| 3411 call.GetDocumentation() | |
| 3412 .SetTag("System") | |
| 3413 .SetSummary("Reconstruct all the index") | |
| 3414 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
| 3415 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
| 3416 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
| 3417 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated."); | |
| 3418 return; | |
| 3419 } | |
| 3420 | |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3421 ServerContext& context = OrthancRestApi::GetContext(call); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3422 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3423 std::list<std::string> studies; |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3424 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3425 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3426 for (std::list<std::string>::const_iterator |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3427 study = studies.begin(); study != studies.end(); ++study) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3428 { |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3429 ServerToolbox::ReconstructResource(context, *study); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3430 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3431 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3432 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3433 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3434 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3435 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3436 static void GetBulkChildren(std::set<std::string>& target, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3437 ServerIndex& index, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3438 const std::set<std::string>& source) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3439 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3440 target.clear(); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3441 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3442 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3443 it = source.begin(); it != source.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3444 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3445 std::list<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3446 index.GetChildren(children, *it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3447 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3448 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3449 child = children.begin(); child != children.end(); ++child) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3450 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3451 target.insert(*child); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3452 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3453 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3454 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3455 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3456 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3457 static void AddMetadata(Json::Value& target, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3458 ServerIndex& index, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3459 const std::string& resource, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3460 ResourceType level) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3461 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3462 target = Json::objectValue; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3463 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3464 std::map<MetadataType, std::string> content; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3465 index.GetAllMetadata(content, resource, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3466 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3467 for (std::map<MetadataType, std::string>::const_iterator |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3468 it = content.begin(); it != content.end(); ++it) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3469 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3470 target[EnumerationToString(it->first)] = it->second; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3471 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3472 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3473 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3474 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3475 static void BulkContent(RestApiPostCall& call) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3476 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3477 static const char* const LEVEL = "Level"; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3478 static const char* const METADATA = "Metadata"; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3479 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3480 if (call.IsDocumentation()) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3481 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3482 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3483 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3484 call.GetDocumentation() |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3485 .SetTag("System") |
| 4879 | 3486 .SetSummary("Describe a set of resources") |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3487 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3488 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3489 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3490 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3491 "`Instance`). Orthanc will loop over the items inside `Resources`, and explore upward or " |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3492 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3493 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3494 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3495 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3496 "whose identifiers are provided in the `Resources` field, in one single call."); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3497 return; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3498 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3499 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3500 Json::Value request; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3501 if (!call.ParseJsonRequest(request) || |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3502 request.type() != Json::objectValue) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3503 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3504 throw OrthancException(ErrorCode_BadRequest, |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3505 "The body must contain a JSON object"); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3506 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3507 else |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3508 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3509 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3510 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3511 bool metadata = true; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3512 if (request.isMember(METADATA)) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3513 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3514 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3515 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3516 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3517 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3518 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3519 Json::Value answer = Json::arrayValue; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3520 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3521 if (request.isMember(LEVEL)) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3522 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3523 // Complex case: Need to explore the DICOM hierarchy |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3524 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3525 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3526 std::set<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3527 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3528 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3529 std::set<std::string> interest; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3530 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3531 assert(ResourceType_Patient < ResourceType_Study && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3532 ResourceType_Study < ResourceType_Series && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3533 ResourceType_Series < ResourceType_Instance); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4698
diff
changeset
|
3534 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4698
diff
changeset
|
3535 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4698
diff
changeset
|
3536 it = resources.begin(); it != resources.end(); ++it) |
|
4698
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diff
changeset
|
3537 { |
|
4699
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added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3538 ResourceType type; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3539 if (index.LookupResourceType(type, *it)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3540 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3541 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3542 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3543 // This resource is already from the level of interest |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3544 interest.insert(*it); |
|
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added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3545 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3546 else if (type < level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3547 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3548 // Need to explore children |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3549 std::set<std::string> current; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3550 current.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3551 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3552 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3553 { |
|
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diff
changeset
|
3554 std::set<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3555 GetBulkChildren(children, index, current); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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diff
changeset
|
3556 |
|
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4698
diff
changeset
|
3557 type = GetChildResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3558 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3559 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3560 for (std::set<std::string>::const_iterator |
| 4716 | 3561 it2 = children.begin(); it2 != children.end(); ++it2) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3562 { |
| 4716 | 3563 interest.insert(*it2); |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3564 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3565 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3566 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3567 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3568 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3569 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3570 current.swap(children); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3571 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3572 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3573 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3574 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3575 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3576 // Need to explore parents |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3577 std::string current = *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3578 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3579 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3580 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3581 std::string parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3582 if (index.LookupParent(parent, current)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3583 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3584 type = GetParentResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3585 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3586 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3587 interest.insert(parent); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3588 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3589 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3590 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3591 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3592 current = parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3593 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3594 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3595 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3596 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3597 break; // The resource has been deleted during the exploration |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3598 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3599 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3600 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3601 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3602 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3603 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3604 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3605 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3606 } |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3607 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3608 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3609 it = interest.begin(); it != interest.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3610 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3611 Json::Value item; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3612 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3613 |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3614 if (OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3615 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3616 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3617 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3618 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3619 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3620 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3621 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3622 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3623 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3624 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3625 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3626 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3627 // Simple case: We return the queried resources as such |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3628 std::list<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3629 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3630 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3631 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3632 it = resources.begin(); it != resources.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3633 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3634 ResourceType level; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3635 Json::Value item; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3636 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3637 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3638 if (index.LookupResourceType(level, *it) && |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3639 OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3640 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3641 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3642 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3643 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3644 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3645 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3646 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3647 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3648 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3649 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3650 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3651 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3652 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3653 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3654 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3655 call.GetOutput().AnswerJson(answer); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3656 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3657 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3658 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3659 |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3660 static void BulkDelete(RestApiPostCall& call) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3661 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3662 if (call.IsDocumentation()) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3663 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3664 call.GetDocumentation() |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3665 .SetTag("System") |
| 4879 | 3666 .SetSummary("Delete a set of resources") |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3667 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3668 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3669 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3670 "whose identifiers are provided in the `Resources` field."); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3671 return; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3672 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3673 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3674 ServerContext& context = OrthancRestApi::GetContext(call); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3675 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3676 Json::Value request; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3677 if (!call.ParseJsonRequest(request) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3678 request.type() != Json::objectValue) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3679 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3680 throw OrthancException(ErrorCode_BadRequest, |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3681 "The body must contain a JSON object"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3682 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3683 else |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3684 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3685 std::set<std::string> resources; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3686 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3687 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3688 for (std::set<std::string>::const_iterator |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3689 it = resources.begin(); it != resources.end(); ++it) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3690 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3691 ResourceType type; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3692 Json::Value remainingAncestor; // Unused |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3693 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3694 if (!context.GetIndex().LookupResourceType(type, *it) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3695 !context.DeleteResource(remainingAncestor, *it, type)) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3696 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3697 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3698 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3699 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3700 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3701 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3702 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3703 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3704 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3705 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3706 void OrthancRestApi::RegisterResources() |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3707 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3708 Register("/instances", ListResources<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3709 Register("/patients", ListResources<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3710 Register("/series", ListResources<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3711 Register("/studies", ListResources<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3712 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3713 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3714 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3715 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3716 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3717 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3718 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3719 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3720 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3721 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3722 Register("/instances/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3723 Register("/patients/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3724 Register("/studies/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3725 Register("/series/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3726 |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3727 Register("/patients/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3728 Register("/series/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3729 Register("/studies/{id}/shared-tags", GetSharedTags); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
3730 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3731 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3732 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3733 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3734 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3735 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3736 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3737 Register("/instances/{id}/file", GetInstanceFile); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3738 Register("/instances/{id}/export", ExportInstanceFile); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3739 Register("/instances/{id}/tags", GetInstanceTags); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3740 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3741 Register("/instances/{id}/frames", ListFrames); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3742 |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
3743 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3744 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3745 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3746 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3747 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3748 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3749 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3750 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3751 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
3752 Register("/instances/{id}/frames/{frame}/numpy", GetNumpyFrame); // New in Orthanc 1.10.0 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3753 Register("/instances/{id}/pdf", ExtractPdf); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3754 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3755 Register("/instances/{id}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3756 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3757 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3758 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3759 Register("/instances/{id}/matlab", GetMatlabImage); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3760 Register("/instances/{id}/header", GetInstanceHeader); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
3761 Register("/instances/{id}/numpy", GetNumpyInstance); // New in Orthanc 1.10.0 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3762 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3763 Register("/patients/{id}/protected", IsProtectedPatient); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3764 Register("/patients/{id}/protected", SetPatientProtection); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3765 |
| 4409 | 3766 std::vector<std::string> resourceTypes; |
| 3767 resourceTypes.push_back("patients"); | |
| 3768 resourceTypes.push_back("studies"); | |
| 3769 resourceTypes.push_back("series"); | |
| 3770 resourceTypes.push_back("instances"); | |
| 3771 | |
| 3772 for (size_t i = 0; i < resourceTypes.size(); i++) | |
| 3773 { | |
| 3774 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
| 3775 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
| 3776 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
| 3777 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3778 |
| 4409 | 3779 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
| 3780 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
| 3781 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
| 3782 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
| 3783 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
| 3784 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
| 3785 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
| 3786 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
| 3787 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
| 3788 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
| 3789 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
| 3790 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
| 3791 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
3792 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/info", GetAttachmentInfo); |
| 4409 | 3793 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); |
| 3794 } | |
| 782 | 3795 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3796 Register("/tools/invalidate-tags", InvalidateTags); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3797 Register("/tools/lookup", Lookup); |
| 1354 | 3798 Register("/tools/find", Find); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3799 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3800 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3801 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3802 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3803 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3804 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3805 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3806 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3807 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3808 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3809 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3810 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3811 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3812 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3813 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3814 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3815 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3816 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3817 |
| 782 | 3818 Register("/instances/{id}/content/*", GetRawContent); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3819 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3820 Register("/series/{id}/ordered-slices", OrderSlices); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
3821 Register("/series/{id}/numpy", GetNumpySeries); // New in Orthanc 1.10.0 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3822 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3823 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3824 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3825 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3826 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3827 Register("/tools/reconstruct", ReconstructAllResources); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3828 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3829 Register("/tools/bulk-content", BulkContent); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3830 Register("/tools/bulk-delete", BulkDelete); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3831 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3832 } |