Mercurial > hg > orthanc
annotate OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.cpp @ 5306:155637655710
Disabled automatic conversion from YBR to RGB when transcoding JPEG to RAW transfer-syntax
author | Alain Mazy <am@osimis.io> |
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date | Mon, 05 Jun 2023 10:02:27 +0200 |
parents | 7cb1b851f5c8 |
children | fb231da5c0f1 |
rev | line source |
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0 | 1 /** |
62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
0 | 7 * |
8 * This program is free software: you can redistribute it and/or | |
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9 * modify it under the terms of the GNU Lesser General Public License |
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10 * as published by the Free Software Foundation, either version 3 of |
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11 * the License, or (at your option) any later version. |
136 | 12 * |
0 | 13 * This program is distributed in the hope that it will be useful, but |
14 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
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16 * Lesser General Public License for more details. |
0 | 17 * |
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18 * You should have received a copy of the GNU Lesser General Public |
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19 * License along with this program. If not, see |
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20 * <http://www.gnu.org/licenses/>. |
0 | 21 **/ |
22 | |
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23 |
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24 #include "../PrecompiledHeaders.h" |
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25 |
71 | 26 #ifndef NOMINMAX |
27 #define NOMINMAX | |
28 #endif | |
0 | 29 |
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30 #if !defined(ORTHANC_SANDBOXED) |
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31 # error The macro ORTHANC_SANDBOXED must be defined |
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32 #endif |
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33 |
3117 | 34 #if !defined(DCMTK_VERSION_NUMBER) |
35 # error The macro DCMTK_VERSION_NUMBER must be defined | |
36 #endif | |
37 | |
0 | 38 #include "FromDcmtkBridge.h" |
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39 #include "ToDcmtkBridge.h" |
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40 #include "../Compatibility.h" |
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41 #include "../Logging.h" |
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42 #include "../Toolbox.h" |
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43 #include "../OrthancException.h" |
0 | 44 |
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45 #if ORTHANC_SANDBOXED == 0 |
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46 # include "../TemporaryFile.h" |
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47 #endif |
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48 |
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49 #include <list> |
71 | 50 #include <limits> |
51 | |
0 | 52 #include <boost/lexical_cast.hpp> |
1656 | 53 #include <boost/filesystem.hpp> |
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54 #include <boost/algorithm/string/predicate.hpp> |
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55 #include <boost/algorithm/string/join.hpp> |
0 | 56 |
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57 #include <dcmtk/dcmdata/dcdeftag.h> |
0 | 58 #include <dcmtk/dcmdata/dcdicent.h> |
59 #include <dcmtk/dcmdata/dcdict.h> | |
60 #include <dcmtk/dcmdata/dcfilefo.h> | |
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61 #include <dcmtk/dcmdata/dcistrmb.h> |
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62 #include <dcmtk/dcmdata/dcostrmb.h> |
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63 #include <dcmtk/dcmdata/dcpixel.h> |
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64 #include <dcmtk/dcmdata/dcuid.h> |
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65 #include <dcmtk/dcmdata/dcxfer.h> |
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66 |
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67 #include <dcmtk/dcmdata/dcvrae.h> |
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68 #include <dcmtk/dcmdata/dcvras.h> |
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69 #include <dcmtk/dcmdata/dcvrat.h> |
302
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70 #include <dcmtk/dcmdata/dcvrcs.h> |
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71 #include <dcmtk/dcmdata/dcvrda.h> |
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72 #include <dcmtk/dcmdata/dcvrds.h> |
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73 #include <dcmtk/dcmdata/dcvrdt.h> |
0 | 74 #include <dcmtk/dcmdata/dcvrfd.h> |
75 #include <dcmtk/dcmdata/dcvrfl.h> | |
302
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76 #include <dcmtk/dcmdata/dcvris.h> |
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77 #include <dcmtk/dcmdata/dcvrlo.h> |
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78 #include <dcmtk/dcmdata/dcvrlt.h> |
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79 #include <dcmtk/dcmdata/dcvrpn.h> |
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80 #include <dcmtk/dcmdata/dcvrsh.h> |
0 | 81 #include <dcmtk/dcmdata/dcvrsl.h> |
82 #include <dcmtk/dcmdata/dcvrss.h> | |
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83 #include <dcmtk/dcmdata/dcvrst.h> |
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84 #include <dcmtk/dcmdata/dcvrtm.h> |
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85 #include <dcmtk/dcmdata/dcvrui.h> |
0 | 86 #include <dcmtk/dcmdata/dcvrul.h> |
87 #include <dcmtk/dcmdata/dcvrus.h> | |
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88 #include <dcmtk/dcmdata/dcvrut.h> |
0 | 89 |
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90 #if DCMTK_VERSION_NUMBER >= 361 |
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91 # include <dcmtk/dcmdata/dcvruc.h> |
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92 # include <dcmtk/dcmdata/dcvrur.h> |
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93 #endif |
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94 |
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95 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1 |
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96 # if !defined(ORTHANC_FRAMEWORK_INCLUDE_RESOURCES) || (ORTHANC_FRAMEWORK_INCLUDE_RESOURCES == 1) |
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97 # include <OrthancFrameworkResources.h> |
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98 # endif |
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99 #endif |
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100 |
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101 #if ORTHANC_ENABLE_DCMTK_JPEG == 1 |
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102 # include <dcmtk/dcmjpeg/djdecode.h> |
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103 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1 |
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104 # include <dcmtk/dcmjpeg/djencode.h> |
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105 # endif |
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106 #endif |
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107 |
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108 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1 |
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109 # include <dcmtk/dcmjpls/djdecode.h> |
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110 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1 |
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111 # include <dcmtk/dcmjpls/djencode.h> |
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112 # endif |
1930 | 113 #endif |
114 | |
115 | |
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116 #include <dcmtk/dcmdata/dcrledrg.h> |
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117 #if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1 |
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118 # include <dcmtk/dcmdata/dcrleerg.h> |
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119 # include <dcmtk/dcmimage/diregist.h> // include to support color images |
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120 #endif |
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121 |
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122 |
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123 static bool hasExternalDictionaries_ = false; |
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124 |
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125 |
62 | 126 namespace Orthanc |
0 | 127 { |
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128 static bool IsBinaryTag(const DcmTag& key) |
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129 { |
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130 return (key.isUnknownVR() || |
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131 key.getEVR() == EVR_OB || |
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132 key.getEVR() == EVR_OW || |
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133 key.getEVR() == EVR_UN || |
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134 key.getEVR() == EVR_ox); |
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135 } |
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136 |
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137 |
1656 | 138 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1 |
139 static void LoadEmbeddedDictionary(DcmDataDictionary& dictionary, | |
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140 FrameworkResources::FileResourceId resource) |
1656 | 141 { |
2017 | 142 std::string content; |
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143 FrameworkResources::GetFileResource(content, resource); |
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145 #if ORTHANC_SANDBOXED == 0 |
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146 TemporaryFile tmp; |
2017 | 147 tmp.Write(content); |
1656 | 148 |
149 if (!dictionary.loadDictionary(tmp.GetPath().c_str())) | |
150 { | |
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151 throw OrthancException(ErrorCode_InternalError, |
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152 "Cannot read embedded dictionary. Under Windows, make sure that " |
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153 "your TEMP directory does not contain special characters."); |
1656 | 154 } |
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155 #else |
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156 if (!dictionary.loadFromMemory(content)) |
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157 { |
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158 throw OrthancException(ErrorCode_InternalError, |
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159 "Cannot read embedded dictionary. Under Windows, make sure that " |
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160 "your TEMP directory does not contain special characters."); |
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161 } |
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162 #endif |
1656 | 163 } |
164 #endif | |
165 | |
166 | |
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167 namespace |
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168 { |
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169 class DictionaryLocker : public boost::noncopyable |
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170 { |
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171 private: |
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172 DcmDataDictionary& dictionary_; |
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173 |
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174 public: |
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175 DictionaryLocker() : dictionary_(dcmDataDict.wrlock()) |
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176 { |
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177 } |
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178 |
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179 ~DictionaryLocker() |
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180 { |
3117 | 181 #if DCMTK_VERSION_NUMBER >= 364 |
182 dcmDataDict.wrunlock(); | |
183 #else | |
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184 dcmDataDict.unlock(); |
3117 | 185 #endif |
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186 } |
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187 |
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188 DcmDataDictionary& operator*() |
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189 { |
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190 return dictionary_; |
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191 } |
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192 |
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193 DcmDataDictionary* operator->() |
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194 { |
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195 return &dictionary_; |
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196 } |
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197 }; |
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198 |
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199 |
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200 ORTHANC_FORCE_INLINE |
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201 static std::string FloatToString(float v) |
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202 { |
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203 /** |
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204 * From "boost::lexical_cast" documentation: "For more involved |
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205 * conversions, such as where precision or formatting need tighter |
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206 * control than is offered by the default behavior of |
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207 * lexical_cast, the conventional stringstream approach is |
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208 * recommended." |
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209 * https://www.boost.org/doc/libs/1_65_0/doc/html/boost_lexical_cast.html |
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210 * http://www.gotw.ca/publications/mill19.htm |
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211 * |
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212 * The precision of 17 corresponds to "defaultRealPrecision" in JsonCpp: |
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213 * https://github.com/open-source-parsers/jsoncpp/blob/master/include/json/value.h |
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214 **/ |
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215 |
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216 //return boost::lexical_cast<std::string>(v); // This was used in Orthanc <= 1.9.0 |
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217 |
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218 std::ostringstream ss; |
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219 ss << std::setprecision(17) << v; |
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220 return ss.str(); |
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221 } |
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222 |
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223 |
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224 ORTHANC_FORCE_INLINE |
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225 static std::string DoubleToString(double v) |
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226 { |
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227 //return boost::lexical_cast<std::string>(v); // This was used in Orthanc <= 1.9.0 |
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228 |
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229 std::ostringstream ss; |
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230 ss << std::setprecision(17) << v; |
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231 return ss.str(); |
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232 } |
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233 |
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234 |
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235 #define DCMTK_TO_CTYPE_CONVERTER(converter, cType, dcmtkType, getter, toStringFunction) \ |
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236 \ |
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237 struct converter \ |
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238 { \ |
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239 typedef cType CType; \ |
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240 \ |
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241 ORTHANC_FORCE_INLINE \ |
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242 static bool Apply(CType& result, \ |
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243 DcmElement& element, \ |
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244 size_t i) \ |
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245 { \ |
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246 return dynamic_cast<dcmtkType&>(element).getter(result, i).good(); \ |
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247 } \ |
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248 \ |
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249 ORTHANC_FORCE_INLINE \ |
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250 static std::string ToString(CType value) \ |
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251 { \ |
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252 return toStringFunction(value); \ |
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253 } \ |
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254 }; |
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255 |
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256 DCMTK_TO_CTYPE_CONVERTER(DcmtkToSint32Converter, Sint32, DcmSignedLong, getSint32, boost::lexical_cast<std::string>) |
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257 DCMTK_TO_CTYPE_CONVERTER(DcmtkToSint16Converter, Sint16, DcmSignedShort, getSint16, boost::lexical_cast<std::string>) |
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258 DCMTK_TO_CTYPE_CONVERTER(DcmtkToUint32Converter, Uint32, DcmUnsignedLong, getUint32, boost::lexical_cast<std::string>) |
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259 DCMTK_TO_CTYPE_CONVERTER(DcmtkToUint16Converter, Uint16, DcmUnsignedShort, getUint16, boost::lexical_cast<std::string>) |
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260 DCMTK_TO_CTYPE_CONVERTER(DcmtkToFloat32Converter, Float32, DcmFloatingPointSingle, getFloat32, FloatToString) |
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261 DCMTK_TO_CTYPE_CONVERTER(DcmtkToFloat64Converter, Float64, DcmFloatingPointDouble, getFloat64, DoubleToString) |
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262 |
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263 |
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264 template <typename F> |
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265 static DicomValue* ApplyDcmtkToCTypeConverter(DcmElement& element) |
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266 { |
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267 F f; |
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268 typename F::CType value; |
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269 |
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270 if (element.getLength() > sizeof(typename F::CType) |
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271 && (element.getLength() % sizeof(typename F::CType)) == 0) |
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272 { |
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273 size_t count = element.getLength() / sizeof(typename F::CType); |
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274 std::vector<std::string> strings; |
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275 for (size_t i = 0; i < count; i++) { |
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276 if (f.Apply(value, element, i)) { |
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277 strings.push_back(F::ToString(value)); |
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278 } |
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279 } |
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280 return new DicomValue(boost::algorithm::join(strings, "\\"), false); |
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281 } |
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282 else if (f.Apply(value, element, 0)) { |
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283 return new DicomValue(F::ToString(value), false); |
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284 } |
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285 else { |
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286 return new DicomValue; |
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287 } |
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288 } |
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289 } |
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290 |
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291 |
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292 void FromDcmtkBridge::InitializeDictionary(bool loadPrivateDictionary) |
1656 | 293 { |
5105 | 294 CLOG(INFO, DICOM) << "Using DCMTK version: " << DCMTK_VERSION_NUMBER; |
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296 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1 |
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297 { |
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298 DictionaryLocker locker; |
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299 |
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300 locker->clear(); |
1656 | 301 |
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302 CLOG(INFO, DICOM) << "Loading the embedded dictionaries"; |
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303 /** |
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304 * Do not load DICONDE dictionary, it breaks the other tags. The |
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305 * command "strace storescu 2>&1 |grep dic" shows that DICONDE |
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306 * dictionary is not loaded by storescu. |
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307 **/ |
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308 //LoadEmbeddedDictionary(*locker, FrameworkResources::DICTIONARY_DICONDE); |
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309 |
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310 LoadEmbeddedDictionary(*locker, FrameworkResources::DICTIONARY_DICOM); |
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311 |
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312 if (loadPrivateDictionary) |
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313 { |
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314 CLOG(INFO, DICOM) << "Loading the embedded dictionary of private tags"; |
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315 LoadEmbeddedDictionary(*locker, FrameworkResources::DICTIONARY_PRIVATE); |
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316 } |
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317 else |
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318 { |
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319 CLOG(INFO, DICOM) << "The dictionary of private tags has not been loaded"; |
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320 } |
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321 } |
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322 #else |
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323 { |
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324 std::vector<std::string> dictionaries; |
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325 |
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326 const char* env = std::getenv(DCM_DICT_ENVIRONMENT_VARIABLE); |
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327 if (env != NULL) |
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328 { |
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329 // This mimics the behavior of DCMTK: |
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330 // https://support.dcmtk.org/docs/file_envvars.html |
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331 #if defined(_WIN32) |
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332 Toolbox::TokenizeString(dictionaries, std::string(env), ';'); |
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333 #else |
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334 Toolbox::TokenizeString(dictionaries, std::string(env), ':'); |
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335 #endif |
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336 } |
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337 else |
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338 { |
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339 boost::filesystem::path base = DCMTK_DICTIONARY_DIR; |
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340 dictionaries.push_back((base / "dicom.dic").string()); |
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341 |
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342 if (loadPrivateDictionary) |
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343 { |
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344 dictionaries.push_back((base / "private.dic").string()); |
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345 } |
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346 } |
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347 |
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348 LoadExternalDictionaries(dictionaries); |
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349 hasExternalDictionaries_ = false; // Fix the side-effect of "LoadExternalDictionaries()" |
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350 } |
1656 | 351 #endif |
352 | |
353 /* make sure data dictionary is loaded */ | |
354 if (!dcmDataDict.isDictionaryLoaded()) | |
355 { | |
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356 throw OrthancException(ErrorCode_InternalError, |
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357 "No DICOM dictionary loaded, check environment variable: " + |
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358 std::string(DCM_DICT_ENVIRONMENT_VARIABLE)); |
1656 | 359 } |
360 | |
361 { | |
362 // Test the dictionary with a simple DICOM tag | |
363 DcmTag key(0x0010, 0x1030); // This is PatientWeight | |
364 if (key.getEVR() != EVR_DS) | |
365 { | |
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366 throw OrthancException(ErrorCode_InternalError, |
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367 "The DICOM dictionary has not been correctly read"); |
1656 | 368 } |
369 } | |
370 } | |
371 | |
372 | |
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373 void FromDcmtkBridge::LoadExternalDictionaries(const std::vector<std::string>& dictionaries) |
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374 { |
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375 DictionaryLocker locker; |
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376 |
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377 CLOG(INFO, DICOM) << "Clearing the DICOM dictionary"; |
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378 locker->clear(); |
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379 |
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380 for (size_t i = 0; i < dictionaries.size(); i++) |
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381 { |
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382 LOG(WARNING) << "Loading external DICOM dictionary: \"" << dictionaries[i] << "\""; |
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383 |
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384 if (!locker->loadDictionary(dictionaries[i].c_str())) |
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385 { |
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386 throw OrthancException(ErrorCode_InexistentFile); |
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387 } |
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388 } |
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389 |
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390 hasExternalDictionaries_ = true; |
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391 } |
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392 |
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393 |
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394 void FromDcmtkBridge::RegisterDictionaryTag(const DicomTag& tag, |
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395 ValueRepresentation vr, |
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396 const std::string& name, |
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397 unsigned int minMultiplicity, |
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398 unsigned int maxMultiplicity, |
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399 const std::string& privateCreator) |
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400 { |
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401 if (minMultiplicity < 1) |
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402 { |
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403 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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404 } |
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405 |
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406 bool arbitrary = false; |
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407 if (maxMultiplicity == 0) |
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408 { |
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409 maxMultiplicity = DcmVariableVM; |
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410 arbitrary = true; |
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411 } |
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412 else if (maxMultiplicity < minMultiplicity) |
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413 { |
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414 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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415 } |
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416 |
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417 DcmEVR evr = ToDcmtkBridge::Convert(vr); |
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418 |
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419 CLOG(INFO, DICOM) << "Registering tag in dictionary: (" << tag.Format() << ") " |
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420 << (DcmVR(evr).getValidVRName()) << " " |
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421 << name << " (multiplicity: " << minMultiplicity << "-" |
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422 << (arbitrary ? "n" : boost::lexical_cast<std::string>(maxMultiplicity)) << ")"; |
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423 |
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424 std::unique_ptr<DcmDictEntry> entry; |
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425 if (privateCreator.empty()) |
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426 { |
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427 if (tag.GetGroup() % 2 == 1) |
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428 { |
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429 char buf[128]; |
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430 sprintf(buf, "Warning: You are registering a private tag (%04x,%04x), " |
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431 "but no private creator was associated with it", |
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432 tag.GetGroup(), tag.GetElement()); |
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433 LOG(WARNING) << buf; |
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434 } |
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435 |
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436 entry.reset(new DcmDictEntry(tag.GetGroup(), |
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437 tag.GetElement(), |
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438 evr, name.c_str(), |
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439 static_cast<int>(minMultiplicity), |
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440 static_cast<int>(maxMultiplicity), |
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441 NULL /* version */, |
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442 OFTrue /* doCopyString */, |
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443 NULL /* private creator */)); |
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444 } |
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445 else |
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446 { |
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447 // "Private Data Elements have an odd Group Number that is not |
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448 // (0001,eeee), (0003,eeee), (0005,eeee), (0007,eeee), or |
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449 // (FFFF,eeee)." |
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450 if (tag.GetGroup() % 2 == 0 /* even */ || |
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451 tag.GetGroup() == 0x0001 || |
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452 tag.GetGroup() == 0x0003 || |
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453 tag.GetGroup() == 0x0005 || |
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454 tag.GetGroup() == 0x0007 || |
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455 tag.GetGroup() == 0xffff) |
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456 { |
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457 char buf[128]; |
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458 sprintf(buf, "Trying to register private tag (%04x,%04x), but it must have an odd group >= 0x0009", |
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459 tag.GetGroup(), tag.GetElement()); |
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460 throw OrthancException(ErrorCode_ParameterOutOfRange, std::string(buf)); |
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461 } |
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462 |
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463 entry.reset(new DcmDictEntry(tag.GetGroup(), |
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464 tag.GetElement(), |
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465 evr, name.c_str(), |
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466 static_cast<int>(minMultiplicity), |
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467 static_cast<int>(maxMultiplicity), |
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468 "private" /* version */, |
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469 OFTrue /* doCopyString */, |
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470 privateCreator.c_str())); |
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471 } |
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472 |
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473 entry->setGroupRangeRestriction(DcmDictRange_Unspecified); |
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474 entry->setElementRangeRestriction(DcmDictRange_Unspecified); |
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475 |
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476 { |
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477 DictionaryLocker locker; |
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478 |
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479 if (locker->findEntry(DcmTagKey(tag.GetGroup(), tag.GetElement()), |
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480 privateCreator.empty() ? NULL : privateCreator.c_str())) |
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481 { |
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482 throw OrthancException(ErrorCode_AlreadyExistingTag, |
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483 "Cannot register twice the tag (" + tag.Format() + |
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fix error if overriding existing tag in the DICOM dictionary
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4690
diff
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|
484 "), whose symbolic name is \"" + name + "\""); |
2116
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prevent registering two tags with the same symbolic name
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2115
diff
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|
485 } |
4695
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fix error if overriding existing tag in the DICOM dictionary
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diff
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486 else |
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487 { |
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488 locker->addEntry(entry.release()); |
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diff
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489 } |
1657
5360cdba70d8
New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
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diff
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|
490 } |
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New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
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parents:
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diff
changeset
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491 } |
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New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
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492 |
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New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
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diff
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493 |
3217
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diff
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|
494 Encoding FromDcmtkBridge::DetectEncoding(bool& hasCodeExtensions, |
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preliminary support of Korean character set
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diff
changeset
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495 DcmItem& dataset, |
1928
84c7eaeb5244
Configuration::GetDefaultEncoding
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1927
diff
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|
496 Encoding defaultEncoding) |
956
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primitives for proper encoding handling
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497 { |
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|
498 // http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_C.12.html#sect_C.12.1.1.2 |
957
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diff
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|
499 |
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diff
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500 OFString tmp; |
3217
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501 if (dataset.findAndGetOFStringArray(DCM_SpecificCharacterSet, tmp).good()) |
957
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diff
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502 { |
3217
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diff
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|
503 std::vector<std::string> tokens; |
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preliminary support of Korean character set
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diff
changeset
|
504 Toolbox::TokenizeString(tokens, std::string(tmp.c_str()), '\\'); |
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preliminary support of Korean character set
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diff
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|
505 |
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diff
changeset
|
506 hasCodeExtensions = (tokens.size() > 1); |
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507 |
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diff
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|
508 for (size_t i = 0; i < tokens.size(); i++) |
957
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detection of encoding
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diff
changeset
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509 { |
3217
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preliminary support of Korean character set
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diff
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|
510 std::string characterSet = Toolbox::StripSpaces(tokens[i]); |
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preliminary support of Korean character set
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diff
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|
511 |
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diff
changeset
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512 if (!characterSet.empty()) |
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diff
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|
513 { |
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preliminary support of Korean character set
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diff
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|
514 Encoding encoding; |
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preliminary support of Korean character set
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diff
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|
515 |
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|
516 if (GetDicomEncoding(encoding, characterSet.c_str())) |
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517 { |
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518 // The specific character set is supported by the Orthanc core |
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diff
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519 return encoding; |
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diff
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|
520 } |
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preliminary support of Korean character set
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diff
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|
521 else |
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parents:
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diff
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|
522 { |
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preliminary support of Korean character set
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parents:
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diff
changeset
|
523 LOG(WARNING) << "Value of Specific Character Set (0008,0005) is not supported: " << characterSet |
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preliminary support of Korean character set
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diff
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|
524 << ", fallback to ASCII (remove all special characters)"; |
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preliminary support of Korean character set
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diff
changeset
|
525 return Encoding_Ascii; |
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diff
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|
526 } |
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preliminary support of Korean character set
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diff
changeset
|
527 } |
957
63973b76a51f
detection of encoding
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parents:
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diff
changeset
|
528 } |
63973b76a51f
detection of encoding
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diff
changeset
|
529 } |
1090
e494ceb8d763
support more encodings
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parents:
1087
diff
changeset
|
530 else |
e494ceb8d763
support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1087
diff
changeset
|
531 { |
3217
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preliminary support of Korean character set
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parents:
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diff
changeset
|
532 hasCodeExtensions = false; |
1090
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support more encodings
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diff
changeset
|
533 } |
3217
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diff
changeset
|
534 |
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parents:
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diff
changeset
|
535 // No specific character set tag: Use the default encoding |
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preliminary support of Korean character set
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diff
changeset
|
536 return defaultEncoding; |
956
2fd5a163776d
primitives for proper encoding handling
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diff
changeset
|
537 } |
2fd5a163776d
primitives for proper encoding handling
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parents:
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diff
changeset
|
538 |
2fd5a163776d
primitives for proper encoding handling
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parents:
949
diff
changeset
|
539 |
4297 | 540 Encoding FromDcmtkBridge::DetectEncoding(DcmItem &dataset, |
541 Encoding defaultEncoding) | |
542 { | |
543 bool hasCodeExtensions; // ignored | |
544 return DetectEncoding(hasCodeExtensions, dataset, defaultEncoding); | |
545 } | |
546 | |
547 | |
548 void FromDcmtkBridge::ExtractDicomSummary(DicomMap& target, | |
2125 | 549 DcmItem& dataset, |
550 unsigned int maxStringLength, | |
3577
33cfcc74d1b1
argument "ignoreTagLength" to ParsedDicomFile::ExtractDicomSummary()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
551 const std::set<DicomTag>& ignoreTagLength) |
0 | 552 { |
4137
6774605d4341
keep only one signature for FromDcmtkBridge::ExtractDicomSummary()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4136
diff
changeset
|
553 const Encoding defaultEncoding = GetDefaultDicomEncoding(); |
6774605d4341
keep only one signature for FromDcmtkBridge::ExtractDicomSummary()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4136
diff
changeset
|
554 |
3217
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preliminary support of Korean character set
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parents:
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diff
changeset
|
555 bool hasCodeExtensions; |
cf8cbeb35f33
preliminary support of Korean character set
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parents:
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diff
changeset
|
556 Encoding encoding = DetectEncoding(hasCodeExtensions, dataset, defaultEncoding); |
956
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primitives for proper encoding handling
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parents:
949
diff
changeset
|
557 |
0 | 558 target.Clear(); |
559 for (unsigned long i = 0; i < dataset.card(); i++) | |
560 { | |
561 DcmElement* element = dataset.getElement(i); | |
562 if (element && element->isLeaf()) | |
563 { | |
3651
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
564 target.SetValueInternal(element->getTag().getGTag(), |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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parents:
3640
diff
changeset
|
565 element->getTag().getETag(), |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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parents:
3640
diff
changeset
|
566 ConvertLeafElement(*element, DicomToJsonFlags_Default, |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
567 maxStringLength, encoding, hasCodeExtensions, ignoreTagLength)); |
0 | 568 } |
5044
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
569 else |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
570 { |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
571 DcmSequenceOfItems* sequence = dynamic_cast<DcmSequenceOfItems*>(element); |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
572 |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
573 if (sequence) |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
574 { |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
575 Json::Value jsonSequence = Json::arrayValue; |
5050 | 576 for (unsigned long s = 0; s < sequence->card(); s++) |
5044
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
577 { |
5050 | 578 DcmItem* child = sequence->getItem(s); |
5044
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
579 Json::Value& v = jsonSequence.append(Json::objectValue); |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
580 DatasetToJson(v, *child, DicomToJsonFormat_Full, DicomToJsonFlags_Default, |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
581 maxStringLength, encoding, hasCodeExtensions, |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
582 ignoreTagLength, 1); |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
583 } |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
584 |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
585 target.SetValue(DicomTag(element->getTag().getGTag(), element->getTag().getETag()), |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
586 jsonSequence); |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
587 } |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
588 } |
0 | 589 } |
590 } | |
591 | |
592 | |
991
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
957
diff
changeset
|
593 DicomTag FromDcmtkBridge::Convert(const DcmTag& tag) |
2f76b92addd4
keep private tags during anonymization
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parents:
957
diff
changeset
|
594 { |
2f76b92addd4
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parents:
957
diff
changeset
|
595 return DicomTag(tag.getGTag(), tag.getETag()); |
2f76b92addd4
keep private tags during anonymization
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parents:
957
diff
changeset
|
596 } |
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
957
diff
changeset
|
597 |
2f76b92addd4
keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
957
diff
changeset
|
598 |
0 | 599 DicomTag FromDcmtkBridge::GetTag(const DcmElement& element) |
600 { | |
601 return DicomTag(element.getGTag(), element.getETag()); | |
602 } | |
603 | |
604 | |
4527
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
605 static DicomValue* CreateValueFromUtf8String(const DicomTag& tag, |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
606 const std::string& utf8, |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
607 unsigned int maxStringLength, |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
608 const std::set<DicomTag>& ignoreTagLength) |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
609 { |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
610 if (maxStringLength != 0 && |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
611 utf8.size() > maxStringLength && |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
612 ignoreTagLength.find(tag) == ignoreTagLength.end()) |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
613 { |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
614 return new DicomValue; // Too long, create a NULL value |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
615 } |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
616 else |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
617 { |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4516
diff
changeset
|
618 return new DicomValue(utf8, false); |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
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parents:
4516
diff
changeset
|
619 } |
31f940334496
Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
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parents:
4516
diff
changeset
|
620 } |
31f940334496
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621 |
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622 |
956
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623 DicomValue* FromDcmtkBridge::ConvertLeafElement(DcmElement& element, |
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624 DicomToJsonFlags flags, |
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625 unsigned int maxStringLength, |
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626 Encoding encoding, |
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627 bool hasCodeExtensions, |
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628 const std::set<DicomTag>& ignoreTagLength) |
0 | 629 { |
630 if (!element.isLeaf()) | |
631 { | |
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632 // This function is only applicable to leaf elements |
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633 throw OrthancException(ErrorCode_BadParameterType); |
0 | 634 } |
635 | |
636 { | |
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637 char *c = NULL; |
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638 if (element.isaString() && |
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639 element.getString(c).good()) |
0 | 640 { |
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641 if (c == NULL) // This case corresponds to the empty string |
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642 { |
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643 return new DicomValue("", false); |
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644 } |
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645 else |
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646 { |
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647 const std::string s(c); |
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648 const std::string utf8 = Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions); |
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649 return CreateValueFromUtf8String(GetTag(element), utf8, maxStringLength, ignoreTagLength); |
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650 } |
0 | 651 } |
652 } | |
653 | |
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654 |
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655 if (element.getVR() == EVR_UN) |
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656 { |
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657 /** |
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658 * Unknown value representation: Lookup in the dictionary. This |
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659 * is notably the case for private tags registered with the |
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660 * "Dictionary" configuration option, or for public tags with |
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661 * "EVR_UN" in the case of Little Endian Implicit transfer |
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662 * syntax (cf. DICOM CP 246). |
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663 * ftp://medical.nema.org/medical/dicom/final/cp246_ft.pdf |
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664 **/ |
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665 DictionaryLocker locker; |
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666 |
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667 const DcmDictEntry* entry = locker->findEntry(element.getTag().getXTag(), |
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668 element.getTag().getPrivateCreator()); |
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669 if (entry != NULL && |
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670 entry->getVR().isaString()) |
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671 { |
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672 Uint8* data = NULL; |
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673 |
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674 if (element.getUint8Array(data) == EC_Normal) |
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675 { |
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676 Uint32 length = element.getLength(); |
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677 |
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678 if (data == NULL || |
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679 length == 0) |
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680 { |
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681 return new DicomValue("", false); // Empty string |
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682 } |
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683 |
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684 // Remove the trailing padding, if any |
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685 if (length > 0 && |
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686 length % 2 == 0 && |
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687 data[length - 1] == '\0') |
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688 { |
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689 length = length - 1; |
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690 } |
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691 |
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692 if (element.getTag().isPrivate()) |
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693 { |
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694 // For private tags, we do not try and convert to UTF-8, |
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695 // as nothing ensures that the encoding of the private tag |
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696 // is the same as that of the remaining of the DICOM |
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697 // dataset. Only go for ASCII strings. |
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698 if (Toolbox::IsAsciiString(data, length)) |
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699 { |
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700 const std::string s(reinterpret_cast<const char*>(data), length); |
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701 return CreateValueFromUtf8String(GetTag(element), s, maxStringLength, ignoreTagLength); |
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702 } |
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703 else |
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704 { |
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705 // Not a plain ASCII string: Consider it as a binary |
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706 // value that is handled in the switch-case below |
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707 } |
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708 } |
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709 else |
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710 { |
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711 // For public tags, convert to UTF-8 by using the |
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712 // "SpecificCharacterSet" tag, if present. This branch is |
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713 // new in Orthanc 1.9.1 (cf. DICOM CP 246). |
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714 const std::string s(reinterpret_cast<const char*>(data), length); |
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715 const std::string utf8 = Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions); |
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716 return CreateValueFromUtf8String(GetTag(element), utf8, maxStringLength, ignoreTagLength); |
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717 } |
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718 } |
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719 } |
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720 } |
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721 |
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722 |
0 | 723 try |
724 { | |
725 // http://support.dcmtk.org/docs/dcvr_8h-source.html | |
726 switch (element.getVR()) | |
727 { | |
728 | |
729 /** | |
1738
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730 * Deal with binary data (including PixelData). |
0 | 731 **/ |
306
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732 |
302
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733 case EVR_OB: // other byte |
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734 case EVR_OF: // other float |
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|
735 case EVR_OW: // other word |
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736 case EVR_UN: // unknown value representation |
1739
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737 case EVR_ox: // OB or OW depending on context |
306
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738 case EVR_DS: // decimal string |
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739 case EVR_IS: // integer string |
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740 case EVR_AS: // age string |
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741 case EVR_DA: // date string |
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742 case EVR_DT: // date time string |
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743 case EVR_TM: // time string |
302
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744 case EVR_AE: // application entity title |
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745 case EVR_CS: // code string |
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746 case EVR_SH: // short string |
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747 case EVR_LO: // long string |
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748 case EVR_ST: // short text |
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749 case EVR_LT: // long text |
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750 case EVR_UT: // unlimited text |
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751 case EVR_PN: // person name |
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752 case EVR_UI: // unique identifier |
1818
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753 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR) |
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754 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR |
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ParsedDicomFile::CreateFromJson
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755 { |
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756 if (!(flags & DicomToJsonFlags_ConvertBinaryToNull)) |
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ParsedDicomFile::CreateFromJson
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757 { |
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ParsedDicomFile::CreateFromJson
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758 Uint8* data = NULL; |
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|
759 Uint16* data16 = NULL; |
1818
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ParsedDicomFile::CreateFromJson
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760 if (element.getUint8Array(data) == EC_Normal) |
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ParsedDicomFile::CreateFromJson
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761 { |
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ParsedDicomFile::CreateFromJson
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762 return new DicomValue(reinterpret_cast<const char*>(data), element.getLength(), true); |
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763 } |
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764 else if (element.getUint16Array(data16) == EC_Normal) |
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|
765 { |
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766 return new DicomValue(reinterpret_cast<const char*>(data16), element.getLength(), true); |
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|
767 } |
1818
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ParsedDicomFile::CreateFromJson
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768 } |
0 | 769 |
1818
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ParsedDicomFile::CreateFromJson
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770 return new DicomValue; |
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ParsedDicomFile::CreateFromJson
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771 } |
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|
772 |
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|
773 /** |
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774 * Numeric types |
1818
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775 **/ |
0 | 776 |
302
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777 case EVR_SL: // signed long |
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778 { |
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779 return ApplyDcmtkToCTypeConverter<DcmtkToSint32Converter>(element); |
302
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780 } |
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781 |
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782 case EVR_SS: // signed short |
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783 { |
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784 return ApplyDcmtkToCTypeConverter<DcmtkToSint16Converter>(element); |
302
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785 } |
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786 |
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787 case EVR_UL: // unsigned long |
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788 { |
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789 return ApplyDcmtkToCTypeConverter<DcmtkToUint32Converter>(element); |
302
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790 } |
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791 |
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792 case EVR_US: // unsigned short |
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793 { |
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|
794 return ApplyDcmtkToCTypeConverter<DcmtkToUint16Converter>(element); |
302
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795 } |
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796 |
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797 case EVR_FL: // float single-precision |
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798 { |
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|
799 return ApplyDcmtkToCTypeConverter<DcmtkToFloat32Converter>(element); |
302
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800 } |
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801 |
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802 case EVR_FD: // float double-precision |
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803 { |
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|
804 return ApplyDcmtkToCTypeConverter<DcmtkToFloat64Converter>(element); |
1131 | 805 } |
806 | |
807 | |
808 /** | |
809 * Attribute tag. | |
810 **/ | |
811 | |
812 case EVR_AT: | |
813 { | |
1147 | 814 DcmTagKey tag; |
815 if (dynamic_cast<DcmAttributeTag&>(element).getTagVal(tag, 0).good()) | |
816 { | |
817 DicomTag t(tag.getGroup(), tag.getElement()); | |
1737
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|
818 return new DicomValue(t.Format(), false); |
1147 | 819 } |
1131 | 820 else |
1147 | 821 { |
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822 return new DicomValue; |
1147 | 823 } |
302
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824 } |
0 | 825 |
826 | |
827 /** | |
302
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828 * Sequence types, should never occur at this point because of |
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829 * "element.isLeaf()". |
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830 **/ |
0 | 831 |
302
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832 case EVR_SQ: // sequence of items |
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|
833 return new DicomValue; |
0 | 834 |
835 | |
302
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|
836 /** |
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837 * Internal to DCMTK. |
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838 **/ |
0 | 839 |
302
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840 case EVR_xs: // SS or US depending on context |
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841 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name) |
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842 case EVR_na: // na="not applicable", for data which has no VR |
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843 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor |
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844 case EVR_item: // used internally for items |
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845 case EVR_metainfo: // used internally for meta info datasets |
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846 case EVR_dataset: // used internally for datasets |
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847 case EVR_fileFormat: // used internally for DICOM files |
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848 case EVR_dicomDir: // used internally for DICOMDIR objects |
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849 case EVR_dirRecord: // used internally for DICOMDIR records |
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850 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image |
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851 case EVR_pixelItem: // used internally for pixel items in a compressed image |
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852 case EVR_PixelData: // used internally for uncompressed pixeld data |
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853 case EVR_OverlayData: // used internally for overlay data |
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|
854 return new DicomValue; |
0 | 855 |
856 | |
302
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|
857 /** |
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|
858 * Default case. |
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859 **/ |
0 | 860 |
302
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861 default: |
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|
862 return new DicomValue; |
0 | 863 } |
864 } | |
2499
83b8b6743531
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changeset
|
865 catch (boost::bad_lexical_cast&) |
0 | 866 { |
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|
867 return new DicomValue; |
0 | 868 } |
2499
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|
869 catch (std::bad_cast&) |
306
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870 { |
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|
871 return new DicomValue; |
306
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872 } |
0 | 873 } |
874 | |
875 | |
1687 | 876 static Json::Value& PrepareNode(Json::Value& parent, |
877 DcmElement& element, | |
878 DicomToJsonFormat format) | |
0 | 879 { |
1687 | 880 assert(parent.type() == Json::objectValue); |
0 | 881 |
35
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changeset
|
882 DicomTag tag(FromDcmtkBridge::GetTag(element)); |
305
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883 const std::string formattedTag = tag.Format(); |
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884 |
1688
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|
885 if (format == DicomToJsonFormat_Short) |
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|
886 { |
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|
887 parent[formattedTag] = Json::nullValue; |
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|
888 return parent[formattedTag]; |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
889 } |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
890 |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
891 // This code gives access to the name of the private tags |
2115
a657f7772e69
Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2076
diff
changeset
|
892 std::string tagName = FromDcmtkBridge::GetTagName(element); |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
893 |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
894 switch (format) |
0 | 895 { |
1860
c7d70f659190
DicomToJsonFormat_Simple -> DicomToJsonFormat_Human
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1854
diff
changeset
|
896 case DicomToJsonFormat_Human: |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
897 parent[tagName] = Json::nullValue; |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
898 return parent[tagName]; |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
899 |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
900 case DicomToJsonFormat_Full: |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
901 { |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
902 parent[formattedTag] = Json::objectValue; |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
903 Json::Value& node = parent[formattedTag]; |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
904 |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
905 if (element.isLeaf()) |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
906 { |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
907 node["Name"] = tagName; |
35
f6d12037f886
full json vs. simplified json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2
diff
changeset
|
908 |
2076 | 909 if (element.getTag().getPrivateCreator() != NULL) |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
910 { |
2076 | 911 node["PrivateCreator"] = element.getTag().getPrivateCreator(); |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
912 } |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
913 |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
914 return node; |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
915 } |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
916 else |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
917 { |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
918 node["Name"] = tagName; |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
919 node["Type"] = "Sequence"; |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
920 node["Value"] = Json::nullValue; |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
921 return node["Value"]; |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
922 } |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
305
diff
changeset
|
923 } |
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
305
diff
changeset
|
924 |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
925 default: |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
926 throw OrthancException(ErrorCode_ParameterOutOfRange); |
1687 | 927 } |
928 } | |
929 | |
930 | |
931 static void LeafValueToJson(Json::Value& target, | |
932 const DicomValue& value, | |
933 DicomToJsonFormat format, | |
1738
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
934 DicomToJsonFlags flags, |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
935 unsigned int maxStringLength) |
1687 | 936 { |
1738
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
937 Json::Value* targetValue = NULL; |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
938 Json::Value* targetType = NULL; |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
939 |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
940 switch (format) |
1687 | 941 { |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
942 case DicomToJsonFormat_Short: |
1860
c7d70f659190
DicomToJsonFormat_Simple -> DicomToJsonFormat_Human
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1854
diff
changeset
|
943 case DicomToJsonFormat_Human: |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
944 { |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
945 assert(target.type() == Json::nullValue); |
1738
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
946 targetValue = ⌖ |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
947 break; |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
948 } |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
949 |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
950 case DicomToJsonFormat_Full: |
0 | 951 { |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
952 assert(target.type() == Json::objectValue); |
1738
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
953 target["Value"] = Json::nullValue; |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
954 target["Type"] = Json::nullValue; |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
955 targetType = &target["Type"]; |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
956 targetValue = &target["Value"]; |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
957 break; |
0 | 958 } |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
959 |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
960 default: |
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1687
diff
changeset
|
961 throw OrthancException(ErrorCode_ParameterOutOfRange); |
1687 | 962 } |
1738
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
963 |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
964 assert(targetValue != NULL); |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
965 assert(targetValue->type() == Json::nullValue); |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
966 assert(targetType == NULL || targetType->type() == Json::nullValue); |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
967 |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
968 if (value.IsNull()) |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
969 { |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
970 if (targetType != NULL) |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
971 { |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
972 *targetType = "Null"; |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
973 } |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
974 } |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
975 else if (value.IsBinary()) |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
976 { |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
977 if (flags & DicomToJsonFlags_ConvertBinaryToAscii) |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
978 { |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
979 *targetValue = Toolbox::ConvertToAscii(value.GetContent()); |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
980 } |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
981 else |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
982 { |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
983 std::string s; |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
984 value.FormatDataUriScheme(s); |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
985 *targetValue = s; |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
986 } |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
987 |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
988 if (targetType != NULL) |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
989 { |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
990 *targetType = "Binary"; |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
991 } |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
992 } |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
993 else if (maxStringLength == 0 || |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
994 value.GetContent().size() <= maxStringLength) |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
995 { |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
996 *targetValue = value.GetContent(); |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
997 |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
998 if (targetType != NULL) |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
999 { |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
1000 *targetType = "String"; |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
1001 } |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
1002 } |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
1003 else |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
1004 { |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
1005 if (targetType != NULL) |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
1006 { |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
1007 *targetType = "TooLong"; |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
1008 } |
15a788a63846
DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1737
diff
changeset
|
1009 } |
1687 | 1010 } |
35
f6d12037f886
full json vs. simplified json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2
diff
changeset
|
1011 |
1687 | 1012 |
2126 | 1013 void FromDcmtkBridge::ElementToJson(Json::Value& parent, |
1014 DcmElement& element, | |
1015 DicomToJsonFormat format, | |
1016 DicomToJsonFlags flags, | |
1017 unsigned int maxStringLength, | |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1018 Encoding encoding, |
3217
cf8cbeb35f33
preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3209
diff
changeset
|
1019 bool hasCodeExtensions, |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4501
diff
changeset
|
1020 const std::set<DicomTag>& ignoreTagLength, |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4501
diff
changeset
|
1021 unsigned int depth) |
1687 | 1022 { |
1691 | 1023 if (parent.type() == Json::nullValue) |
1024 { | |
1025 parent = Json::objectValue; | |
1026 } | |
1027 | |
1028 assert(parent.type() == Json::objectValue); | |
1687 | 1029 Json::Value& target = PrepareNode(parent, element, format); |
1030 | |
1031 if (element.isLeaf()) | |
1032 { | |
2129
0c09d1af22f3
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1033 // The "0" below lets "LeafValueToJson()" take care of "TooLong" values |
3712
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1034 std::unique_ptr<DicomValue> v(FromDcmtkBridge::ConvertLeafElement |
4696
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1035 (element, flags, 0, encoding, hasCodeExtensions, ignoreTagLength)); |
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1036 |
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1037 if (ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end()) |
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1038 { |
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1039 LeafValueToJson(target, *v, format, flags, maxStringLength); |
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1040 } |
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1041 else |
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1042 { |
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1043 LeafValueToJson(target, *v, format, flags, 0); |
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|
1044 } |
0 | 1045 } |
1046 else | |
1047 { | |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1048 assert(target.type() == Json::nullValue); |
27d70e9ee2e4
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|
1049 target = Json::arrayValue; |
0 | 1050 |
1051 // "All subclasses of DcmElement except for DcmSequenceOfItems | |
1052 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset | |
1687 | 1053 // etc. are not." The following dynamic_cast is thus OK. |
0 | 1054 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element); |
1055 | |
1056 for (unsigned long i = 0; i < sequence.card(); i++) | |
1057 { | |
1058 DcmItem* child = sequence.getItem(i); | |
1687 | 1059 Json::Value& v = target.append(Json::objectValue); |
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|
1060 DatasetToJson(v, *child, format, flags, maxStringLength, encoding, hasCodeExtensions, |
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|
1061 ignoreTagLength, depth + 1); |
1687 | 1062 } |
0 | 1063 } |
1064 } | |
1065 | |
1066 | |
2126 | 1067 void FromDcmtkBridge::DatasetToJson(Json::Value& parent, |
1068 DcmItem& item, | |
1069 DicomToJsonFormat format, | |
1070 DicomToJsonFlags flags, | |
1071 unsigned int maxStringLength, | |
2409
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1072 Encoding encoding, |
3217
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1073 bool hasCodeExtensions, |
4514
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1074 const std::set<DicomTag>& ignoreTagLength, |
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|
1075 unsigned int depth) |
1686 | 1076 { |
1688
27d70e9ee2e4
DicomToJsonFormat enumeration
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diff
changeset
|
1077 assert(parent.type() == Json::objectValue); |
1686 | 1078 |
1079 for (unsigned long i = 0; i < item.card(); i++) | |
1080 { | |
1081 DcmElement* element = item.getElement(i); | |
1735
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1082 if (element == NULL) |
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1083 { |
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1084 throw OrthancException(ErrorCode_InternalError); |
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|
1085 } |
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1086 |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
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diff
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|
1087 DicomTag tag(FromDcmtkBridge::Convert(element->getTag())); |
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ParsedDicomFile::CreateFromJson
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1088 |
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1089 // New flag in Orthanc 1.9.1 |
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1090 if (depth == 0 && |
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1091 (flags & DicomToJsonFlags_StopAfterPixelData) && |
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1092 tag > DICOM_TAG_PIXEL_DATA) |
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1093 { |
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1094 continue; |
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1095 } |
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1096 |
4516
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1097 // New flag in Orthanc 1.9.1 |
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1098 if ((flags & DicomToJsonFlags_SkipGroupLengths) && |
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1099 tag.GetElement() == 0x0000) |
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1100 { |
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1101 continue; |
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1102 } |
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|
1103 |
1818
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ParsedDicomFile::CreateFromJson
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diff
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|
1104 /*element->getTag().isPrivate()*/ |
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ParsedDicomFile::CreateFromJson
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diff
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|
1105 if (tag.IsPrivate() && |
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ParsedDicomFile::CreateFromJson
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diff
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|
1106 !(flags & DicomToJsonFlags_IncludePrivateTags)) |
1736
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diff
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|
1107 { |
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|
1108 continue; |
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1109 } |
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1110 |
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|
1111 if (!(flags & DicomToJsonFlags_IncludeUnknownTags)) |
1735
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|
1112 { |
1736
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diff
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|
1113 DictionaryLocker locker; |
3691
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diff
changeset
|
1114 if (locker->findEntry(element->getTag(), element->getTag().getPrivateCreator()) == NULL) |
1736
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1115 { |
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1116 continue; |
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diff
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1117 } |
1735
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|
1118 } |
1736
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1119 |
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|
1120 if (IsBinaryTag(element->getTag())) |
1739
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1121 { |
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1122 // This is a binary tag |
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1123 if ((tag == DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludePixelData)) || |
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1124 (tag != DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludeBinary))) |
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1125 { |
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|
1126 continue; |
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|
1127 } |
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|
1128 } |
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1129 |
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|
1130 FromDcmtkBridge::ElementToJson(parent, *element, format, flags, maxStringLength, encoding, |
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|
1131 hasCodeExtensions, ignoreTagLength, depth); |
1686 | 1132 } |
1133 } | |
1134 | |
1135 | |
2126 | 1136 void FromDcmtkBridge::ExtractDicomAsJson(Json::Value& target, |
1137 DcmDataset& dataset, | |
1138 DicomToJsonFormat format, | |
1139 DicomToJsonFlags flags, | |
2131 | 1140 unsigned int maxStringLength, |
2409
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|
1141 const std::set<DicomTag>& ignoreTagLength) |
0 | 1142 { |
4140
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1143 const Encoding defaultEncoding = GetDefaultDicomEncoding(); |
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1144 |
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1145 bool hasCodeExtensions; |
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1146 Encoding encoding = DetectEncoding(hasCodeExtensions, dataset, defaultEncoding); |
2126 | 1147 |
1688
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1148 target = Json::objectValue; |
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1149 DatasetToJson(target, dataset, format, flags, maxStringLength, encoding, hasCodeExtensions, ignoreTagLength, 0); |
0 | 1150 } |
1151 | |
1152 | |
2126 | 1153 void FromDcmtkBridge::ExtractHeaderAsJson(Json::Value& target, |
1154 DcmMetaInfo& dataset, | |
1155 DicomToJsonFormat format, | |
1156 DicomToJsonFlags flags, | |
1157 unsigned int maxStringLength) | |
1831
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1158 { |
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1159 std::set<DicomTag> ignoreTagLength; |
1831
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1160 target = Json::objectValue; |
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1161 DatasetToJson(target, dataset, format, flags, maxStringLength, Encoding_Ascii, false, ignoreTagLength, 0); |
1831
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1162 } |
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1163 |
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1164 |
2115
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1165 static std::string GetTagNameInternal(DcmTag& tag) |
0 | 1166 { |
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1167 if (!hasExternalDictionaries_) |
291
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1168 { |
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1169 /** |
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1170 * Some patches for important tags because of different DICOM |
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1171 * dictionaries between DCMTK versions. Since Orthanc 1.9.4, we |
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1172 * don't apply these patches if external dictionaries are |
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1173 * loaded, notably for compatibility with DICONDE. In Orthanc <= |
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1174 * 1.9.3, this was done by method "DicomTag::GetMainTagsName()". |
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1175 **/ |
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1176 |
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1177 DicomTag tmp(tag.getGroup(), tag.getElement()); |
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1178 |
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1179 if (tmp == DICOM_TAG_ACCESSION_NUMBER) |
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1180 return "AccessionNumber"; |
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1181 |
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1182 if (tmp == DICOM_TAG_SOP_INSTANCE_UID) |
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1183 return "SOPInstanceUID"; |
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1184 |
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1185 if (tmp == DICOM_TAG_PATIENT_ID) |
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1186 return "PatientID"; |
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1187 |
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1188 if (tmp == DICOM_TAG_SERIES_INSTANCE_UID) |
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1189 return "SeriesInstanceUID"; |
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1190 |
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1191 if (tmp == DICOM_TAG_STUDY_INSTANCE_UID) |
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1192 return "StudyInstanceUID"; |
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1193 |
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1194 if (tmp == DICOM_TAG_PIXEL_DATA) |
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1195 return "PixelData"; |
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1196 |
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1197 if (tmp == DICOM_TAG_IMAGE_INDEX) |
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1198 return "ImageIndex"; |
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1199 |
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1200 if (tmp == DICOM_TAG_INSTANCE_NUMBER) |
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1201 return "InstanceNumber"; |
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1202 |
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1203 if (tmp == DICOM_TAG_NUMBER_OF_SLICES) |
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1204 return "NumberOfSlices"; |
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1205 |
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1206 if (tmp == DICOM_TAG_NUMBER_OF_FRAMES) |
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1207 return "NumberOfFrames"; |
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1208 |
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1209 if (tmp == DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES) |
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1210 return "CardiacNumberOfImages"; |
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1211 |
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1212 if (tmp == DICOM_TAG_IMAGES_IN_ACQUISITION) |
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1213 return "ImagesInAcquisition"; |
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1214 |
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1215 if (tmp == DICOM_TAG_PATIENT_NAME) |
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1216 return "PatientName"; |
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1217 |
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1218 if (tmp == DICOM_TAG_IMAGE_POSITION_PATIENT) |
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1219 return "ImagePositionPatient"; |
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1220 |
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1221 if (tmp == DICOM_TAG_IMAGE_ORIENTATION_PATIENT) |
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1222 return "ImageOrientationPatient"; |
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1223 |
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1224 // New in Orthanc 1.6.0, as tagged as "RETIRED_" since DCMTK 3.6.4 |
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1225 if (tmp == DICOM_TAG_OTHER_PATIENT_IDS) |
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1226 return "OtherPatientIDs"; |
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1227 |
2115
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1228 // End of patches |
291
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1229 } |
106 | 1230 |
305
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1231 #if 0 |
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1232 // This version explicitly calls the dictionary |
0 | 1233 const DcmDataDictionary& dict = dcmDataDict.rdlock(); |
1234 const DcmDictEntry* entry = dict.findEntry(tag, NULL); | |
1235 | |
306
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1236 std::string s(DcmTag_ERROR_TagName); |
0 | 1237 if (entry != NULL) |
1238 { | |
1239 s = std::string(entry->getTagName()); | |
1240 } | |
1241 | |
1242 dcmDataDict.unlock(); | |
1243 return s; | |
305
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1244 #else |
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1245 const char* name = tag.getTagName(); |
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1246 if (name == NULL) |
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|
1247 { |
306
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1248 return DcmTag_ERROR_TagName; |
305
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1249 } |
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1250 else |
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|
1251 { |
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|
1252 return std::string(name); |
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1253 } |
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1254 #endif |
0 | 1255 } |
1256 | |
1257 | |
5151
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1258 static bool GetTagFromNameInternal(DicomTag& tag, const std::string& tagName) |
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|
1259 { |
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parents:
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diff
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|
1260 // conversion from old tag names (ex: RETIRED_OtherPatientIDs is the new name for OtherPatientIDs that is still a valid name for DICOM_TAG_OTHER_PATIENT_IDS) |
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|
1261 if (tagName == "OtherPatientIDs") |
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|
1262 { |
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|
1263 tag = DICOM_TAG_OTHER_PATIENT_IDS; |
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|
1264 return true; |
a72e00a23191
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|
1265 } |
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|
1266 |
a72e00a23191
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|
1267 return false; |
a72e00a23191
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1268 } |
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|
1269 |
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|
1270 std::string FromDcmtkBridge::GetTagName(const DicomTag& t, |
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1271 const std::string& privateCreator) |
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1272 { |
5151
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1273 |
2115
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|
1274 DcmTag tag(t.GetGroup(), t.GetElement()); |
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1275 |
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|
1276 if (!privateCreator.empty()) |
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|
1277 { |
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1278 tag.setPrivateCreator(privateCreator.c_str()); |
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1279 } |
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1280 |
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1281 return GetTagNameInternal(tag); |
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1282 } |
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1283 |
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1284 |
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changeset
|
1285 std::string FromDcmtkBridge::GetTagName(const DcmElement& element) |
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|
1286 { |
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|
1287 // Copy the tag to ensure const-correctness of DcmElement. Note |
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|
1288 // that the private creator information is also copied. |
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|
1289 DcmTag tag(element.getTag()); |
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1290 |
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1291 return GetTagNameInternal(tag); |
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|
1292 } |
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|
1293 |
4297 | 1294 std::string FromDcmtkBridge::GetTagName(const DicomElement &element) |
1295 { | |
1296 return GetTagName(element.GetTag(), ""); | |
1297 } | |
1298 | |
2115
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diff
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1299 |
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diff
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|
1300 |
304 | 1301 DicomTag FromDcmtkBridge::ParseTag(const char* name) |
0 | 1302 { |
2662
47d812308d63
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1303 DicomTag parsed(0, 0); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1304 if (DicomTag::ParseHexadecimal(parsed, name)) |
304 | 1305 { |
2662
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1306 return parsed; |
1861
a7bea843a7bc
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1307 } |
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1308 |
305
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|
1309 #if 0 |
0 | 1310 const DcmDataDictionary& dict = dcmDataDict.rdlock(); |
1311 const DcmDictEntry* entry = dict.findEntry(name); | |
1312 | |
1313 if (entry == NULL) | |
1314 { | |
1315 dcmDataDict.unlock(); | |
1582
bd1889029cbb
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1316 throw OrthancException(ErrorCode_UnknownDicomTag); |
0 | 1317 } |
1318 else | |
1319 { | |
1320 DcmTagKey key = entry->getKey(); | |
1321 DicomTag tag(key.getGroup(), key.getElement()); | |
1322 dcmDataDict.unlock(); | |
1323 return tag; | |
1324 } | |
305
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diff
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|
1325 #else |
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diff
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|
1326 DcmTag tag; |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1327 if (DcmTag::findTagFromName(name, tag).good()) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1328 { |
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diff
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|
1329 return DicomTag(tag.getGTag(), tag.getETag()); |
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diff
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|
1330 } |
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diff
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|
1331 else |
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diff
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|
1332 { |
5151
a72e00a23191
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Alain Mazy <am@osimis.io>
parents:
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diff
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|
1333 DicomTag dcmTag(0, 0); |
a72e00a23191
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Alain Mazy <am@osimis.io>
parents:
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diff
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|
1334 if (GetTagFromNameInternal(dcmTag, name)) |
a72e00a23191
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Alain Mazy <am@osimis.io>
parents:
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diff
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1335 { |
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|
1336 return dcmTag; |
a72e00a23191
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Alain Mazy <am@osimis.io>
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|
1337 } |
a72e00a23191
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diff
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|
1338 |
4696
dd6274412ff4
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diff
changeset
|
1339 CLOG(INFO, DICOM) << "Unknown DICOM tag: \"" << name << "\""; |
4935
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|
1340 throw OrthancException(ErrorCode_UnknownDicomTag, name, false); |
305
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1341 } |
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|
1342 #endif |
0 | 1343 } |
1344 | |
4297 | 1345 DicomTag FromDcmtkBridge::ParseTag(const std::string &name) |
1346 { | |
1347 return ParseTag(name.c_str()); | |
1348 } | |
1349 | |
1350 bool FromDcmtkBridge::HasTag(const DicomMap &fields, const std::string &tagName) | |
1351 { | |
1352 return fields.HasTag(ParseTag(tagName)); | |
1353 } | |
1354 | |
4941 | 1355 void FromDcmtkBridge::FormatListOfTags(std::string& output, const std::set<DicomTag>& tags) |
1356 { | |
1357 std::set<std::string> values; | |
1358 for (std::set<DicomTag>::const_iterator it = tags.begin(); | |
4981 | 1359 it != tags.end(); ++it) |
4941 | 1360 { |
1361 values.insert(it->Format()); | |
1362 } | |
1363 | |
1364 Toolbox::JoinStrings(output, values, ";"); | |
1365 } | |
4935
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1366 |
4950
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1367 void FromDcmtkBridge::FormatListOfTags(Json::Value& output, const std::set<DicomTag>& tags) |
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1368 { |
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|
1369 output = Json::arrayValue; |
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|
1370 for (std::set<DicomTag>::const_iterator it = tags.begin(); |
4981 | 1371 it != tags.end(); ++it) |
4950
3778a0433dd3
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|
1372 { |
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|
1373 output.append(it->Format()); |
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|
1374 } |
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diff
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|
1375 } |
3778a0433dd3
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1376 |
4935
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1377 // parses a list like "0010,0010;PatientBirthDate;0020,0020" |
acd3f72e2a21
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1378 void FromDcmtkBridge::ParseListOfTags(std::set<DicomTag>& result, const std::string& source) |
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1379 { |
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1380 result.clear(); |
acd3f72e2a21
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|
1381 |
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1382 std::vector<std::string> tokens; |
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|
1383 Toolbox::TokenizeString(tokens, source, ';'); |
acd3f72e2a21
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1384 |
acd3f72e2a21
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1385 for (std::vector<std::string>::const_iterator it = tokens.begin(); |
4981 | 1386 it != tokens.end(); ++it) |
4935
acd3f72e2a21
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1387 { |
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|
1388 if (it->size() > 0) |
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1389 { |
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|
1390 DicomTag tag = FromDcmtkBridge::ParseTag(*it); |
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|
1391 result.insert(tag); |
acd3f72e2a21
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1392 } |
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1393 } |
acd3f72e2a21
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1394 } |
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|
1395 |
acd3f72e2a21
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changeset
|
1396 |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
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diff
changeset
|
1397 void FromDcmtkBridge::ParseListOfTags(std::set<DicomTag>& result, const Json::Value& source) |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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|
1398 { |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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diff
changeset
|
1399 result.clear(); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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diff
changeset
|
1400 |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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|
1401 if (!source.isArray()) |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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changeset
|
1402 { |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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|
1403 throw OrthancException(ErrorCode_BadRequest, "List of tags is not an array"); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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|
1404 } |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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|
1405 |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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|
1406 for (Json::ArrayIndex i = 0; i < source.size(); i++) |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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1407 { |
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|
1408 const std::string& value = source[i].asString(); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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1409 DicomTag tag = FromDcmtkBridge::ParseTag(value); |
8422e4f99a18
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|
1410 result.insert(tag); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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1411 } |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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1412 } |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
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|
1413 |
4297 | 1414 const DicomValue &FromDcmtkBridge::GetValue(const DicomMap &fields, |
1415 const std::string &tagName) | |
1416 { | |
1417 return fields.GetValue(ParseTag(tagName)); | |
1418 } | |
1419 | |
1420 void FromDcmtkBridge::SetValue(DicomMap &target, | |
1421 const std::string &tagName, | |
1422 DicomValue *value) | |
1423 { | |
1424 const DicomTag tag = ParseTag(tagName); | |
1425 target.SetValueInternal(tag.GetGroup(), tag.GetElement(), value); | |
1426 } | |
1427 | |
0 | 1428 |
1655
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diff
changeset
|
1429 bool FromDcmtkBridge::IsUnknownTag(const DicomTag& tag) |
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1430 { |
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|
1431 DcmTag tmp(tag.GetGroup(), tag.GetElement()); |
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changeset
|
1432 return tmp.isUnknownVR(); |
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1433 } |
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1434 |
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1435 |
0 | 1436 void FromDcmtkBridge::ToJson(Json::Value& result, |
1368 | 1437 const DicomMap& values, |
4697
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changeset
|
1438 DicomToJsonFormat format) |
0 | 1439 { |
1440 if (result.type() != Json::objectValue) | |
1441 { | |
62 | 1442 throw OrthancException(ErrorCode_BadParameterType); |
0 | 1443 } |
1444 | |
1445 result.clear(); | |
1446 | |
3651
46cb00e4adbb
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|
1447 for (DicomMap::Content::const_iterator |
46cb00e4adbb
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changeset
|
1448 it = values.content_.begin(); it != values.content_.end(); ++it) |
0 | 1449 { |
4697
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changeset
|
1450 switch (format) |
1368 | 1451 { |
4697
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|
1452 case DicomToJsonFormat_Human: |
1368 | 1453 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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changeset
|
1454 // TODO Inject PrivateCreator if some is available in the DicomMap? |
569d9ef165b1
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changeset
|
1455 const std::string tagName = GetTagName(it->first, ""); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1456 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1457 if (it->second->IsNull()) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1458 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1459 result[tagName] = Json::nullValue; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1460 } |
5044
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1461 else if (it->second->IsSequence()) |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1462 { |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1463 result[tagName] = Json::arrayValue; |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1464 const Json::Value& jsonSequence = it->second->GetSequenceContent(); |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1465 |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1466 for (Json::Value::ArrayIndex i = 0; i < jsonSequence.size(); ++i) |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1467 { |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1468 Json::Value target = Json::objectValue; |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1469 Toolbox::SimplifyDicomAsJson(target, jsonSequence[i], DicomToJsonFormat_Human); |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1470 result[tagName].append(target); |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1471 } |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1472 } |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1473 else |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1474 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1475 // TODO IsBinary |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1476 result[tagName] = it->second->GetContent(); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1477 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1478 break; |
1368 | 1479 } |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1480 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1481 case DicomToJsonFormat_Full: |
1368 | 1482 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1483 // TODO Inject PrivateCreator if some is available in the DicomMap? |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1484 const std::string tagName = GetTagName(it->first, ""); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1485 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1486 Json::Value value = Json::objectValue; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1487 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1488 value["Name"] = tagName; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1489 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1490 if (it->second->IsNull()) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1491 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1492 value["Type"] = "Null"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1493 value["Value"] = Json::nullValue; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1494 } |
5044
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1495 else if (it->second->IsSequence()) |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1496 { |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1497 value["Type"] = "Sequence"; |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1498 value["Value"] = it->second->GetSequenceContent(); |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1499 } |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1500 else |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1501 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1502 // TODO IsBinary |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1503 value["Type"] = "String"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1504 value["Value"] = it->second->GetContent(); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1505 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1506 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1507 result[it->first.Format()] = value; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1508 break; |
1368 | 1509 } |
1510 | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1511 case DicomToJsonFormat_Short: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1512 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1513 const std::string hex = it->first.Format(); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1514 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1515 if (it->second->IsNull()) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1516 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1517 result[hex] = Json::nullValue; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1518 } |
5044
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1519 else if (it->second->IsSequence()) |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1520 { |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1521 result[hex] = Json::arrayValue; |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1522 const Json::Value& jsonSequence = it->second->GetSequenceContent(); |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1523 |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1524 for (Json::Value::ArrayIndex i = 0; i < jsonSequence.size(); ++i) |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1525 { |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1526 Json::Value target = Json::objectValue; |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1527 Toolbox::SimplifyDicomAsJson(target, jsonSequence[i], DicomToJsonFormat_Short); |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1528 result[hex].append(target); |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1529 } |
6fed78e13233
Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents:
5011
diff
changeset
|
1530 } |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1531 else |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1532 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1533 // TODO IsBinary |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1534 result[hex] = it->second->GetContent(); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1535 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1536 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1537 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1538 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1539 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1540 default: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4696
diff
changeset
|
1541 throw OrthancException(ErrorCode_ParameterOutOfRange); |
1368 | 1542 } |
0 | 1543 } |
1544 } | |
176 | 1545 |
1546 | |
788 | 1547 std::string FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType level) |
176 | 1548 { |
1549 char uid[100]; | |
1550 | |
1551 switch (level) | |
1552 { | |
788 | 1553 case ResourceType_Patient: |
311 | 1554 // The "PatientID" field is of type LO (Long String), 64 |
1555 // Bytes Maximum. An UUID is of length 36, thus it can be used | |
1556 // as a random PatientID. | |
2512
4dcafa8d6633
SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2499
diff
changeset
|
1557 return Toolbox::GenerateUuid(); |
306
326d5a4a5af3
modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
305
diff
changeset
|
1558 |
788 | 1559 case ResourceType_Instance: |
302
238134081136
modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
1560 return dcmGenerateUniqueIdentifier(uid, SITE_INSTANCE_UID_ROOT); |
176 | 1561 |
788 | 1562 case ResourceType_Series: |
302
238134081136
modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
1563 return dcmGenerateUniqueIdentifier(uid, SITE_SERIES_UID_ROOT); |
176 | 1564 |
788 | 1565 case ResourceType_Study: |
302
238134081136
modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
1566 return dcmGenerateUniqueIdentifier(uid, SITE_STUDY_UID_ROOT); |
176 | 1567 |
302
238134081136
modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
1568 default: |
238134081136
modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
1569 throw OrthancException(ErrorCode_ParameterOutOfRange); |
176 | 1570 } |
1571 } | |
1572 | |
3748
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1573 |
3872
b40dfa6dc8da
working on a simpler abstraction for transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3811
diff
changeset
|
1574 |
3748
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1575 static bool SaveToMemoryBufferInternal(std::string& buffer, |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1576 DcmFileFormat& dicom, |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1577 E_TransferSyntax xfer) |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1578 { |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1579 E_EncodingType encodingType = /*opt_sequenceType*/ EET_ExplicitLength; |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1580 |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1581 // Create a memory buffer with the proper size |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1582 { |
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transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
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|
1583 const uint32_t estimatedSize = dicom.calcElementLength(xfer, encodingType); // (*) |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1584 buffer.resize(estimatedSize); |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1585 } |
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transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1586 |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1587 DcmOutputBufferStream ob(&buffer[0], buffer.size()); |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
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3743
diff
changeset
|
1588 |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
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3743
diff
changeset
|
1589 // Fill the memory buffer with the meta-header and the dataset |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
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3743
diff
changeset
|
1590 dicom.transferInit(); |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
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3743
diff
changeset
|
1591 OFCondition c = dicom.write(ob, xfer, encodingType, NULL, |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1592 /*opt_groupLength*/ EGL_recalcGL, |
3765
4a25727401cd
first transcoding to jpeg 8bpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3748
diff
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|
1593 /*opt_paddingType*/ EPD_noChange, |
4a25727401cd
first transcoding to jpeg 8bpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3748
diff
changeset
|
1594 /*padlen*/ 0, /*subPadlen*/ 0, /*instanceLength*/ 0, |
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first transcoding to jpeg 8bpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3748
diff
changeset
|
1595 EWM_updateMeta /* creates new SOP instance UID on lossy */); |
3748
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1596 dicom.transferEnd(); |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1597 |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1598 if (c.good()) |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1599 { |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1600 // The DICOM file is successfully written, truncate the target |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1601 // buffer if its size was overestimated by (*) |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1602 ob.flush(); |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1603 |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1604 size_t effectiveSize = static_cast<size_t>(ob.tell()); |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1605 if (effectiveSize < buffer.size()) |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1606 { |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1607 buffer.resize(effectiveSize); |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1608 } |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1609 |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1610 return true; |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1611 } |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1612 else |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1613 { |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1614 // Error |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
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3743
diff
changeset
|
1615 buffer.clear(); |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1616 return false; |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1617 } |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1618 } |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1619 |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
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3743
diff
changeset
|
1620 |
291
4d7469f72a0b
embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
1621 bool FromDcmtkBridge::SaveToMemoryBuffer(std::string& buffer, |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
991
diff
changeset
|
1622 DcmDataset& dataSet) |
291
4d7469f72a0b
embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
1623 { |
4d7469f72a0b
embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
1624 // Determine the transfer syntax which shall be used to write the |
3811
890af7156f19
fix transcoding to jpeg baseline
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3772
diff
changeset
|
1625 // information to the file. If not possible, switch to the Little |
890af7156f19
fix transcoding to jpeg baseline
Sebastien Jodogne <s.jodogne@gmail.com>
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3772
diff
changeset
|
1626 // Endian syntax, with explicit length. |
291
4d7469f72a0b
embedding of dicom dictionaries
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285
diff
changeset
|
1627 |
4d7469f72a0b
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Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
1628 // http://support.dcmtk.org/docs/dcxfer_8h-source.html |
661
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1629 |
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1630 |
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1631 /** |
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1632 * Note that up to Orthanc 0.7.1 (inclusive), the |
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1633 * "EXS_LittleEndianExplicit" was always used to save the DICOM |
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1634 * dataset into memory. We now keep the original transfer syntax |
d233b5090105
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1635 * (if available). |
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1636 **/ |
3883
795c9ca5eb91
DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3882
diff
changeset
|
1637 E_TransferSyntax xfer = dataSet.getCurrentXfer(); |
661
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1638 if (xfer == EXS_Unknown) |
d233b5090105
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1639 { |
d233b5090105
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1640 // No information about the original transfer syntax: This is |
d233b5090105
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Sebastien Jodogne <s.jodogne@gmail.com>
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656
diff
changeset
|
1641 // most probably a DICOM dataset that was read from memory. |
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1642 xfer = EXS_LittleEndianExplicit; |
d233b5090105
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1643 } |
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1644 |
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1645 // Create the meta-header information |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
991
diff
changeset
|
1646 DcmFileFormat ff(&dataSet); |
661
d233b5090105
accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
656
diff
changeset
|
1647 ff.validateMetaInfo(xfer); |
1316
1c8dfedefefe
Fix anonymization generating non-portable DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1307
diff
changeset
|
1648 ff.removeInvalidGroups(); |
291
4d7469f72a0b
embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
1649 |
3748
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1650 return SaveToMemoryBufferInternal(buffer, ff, xfer); |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1651 } |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1652 |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1653 |
3872
b40dfa6dc8da
working on a simpler abstraction for transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3811
diff
changeset
|
1654 bool FromDcmtkBridge::Transcode(DcmFileFormat& dicom, |
3748
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1655 DicomTransferSyntax syntax, |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1656 const DcmRepresentationParameter* representation) |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
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3743
diff
changeset
|
1657 { |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1658 E_TransferSyntax xfer; |
ca36e3f1112c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1659 if (!LookupDcmtkTransferSyntax(xfer, syntax)) |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1660 { |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1661 throw OrthancException(ErrorCode_InternalError); |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
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3743
diff
changeset
|
1662 } |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
1663 else |
3885
e23026566536
removed unused functions
Sebastien Jodogne <s.jodogne@gmail.com>
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3883
diff
changeset
|
1664 { |
e23026566536
removed unused functions
Sebastien Jodogne <s.jodogne@gmail.com>
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3883
diff
changeset
|
1665 DicomTransferSyntax sourceSyntax; |
e23026566536
removed unused functions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3883
diff
changeset
|
1666 bool known = LookupOrthancTransferSyntax(sourceSyntax, dicom); |
3922
74eeadf5d51d
fix access to compressed frames after transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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3896
diff
changeset
|
1667 |
74eeadf5d51d
fix access to compressed frames after transcoding
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3896
diff
changeset
|
1668 if (!dicom.chooseRepresentation(xfer, representation).good() || |
74eeadf5d51d
fix access to compressed frames after transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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3896
diff
changeset
|
1669 !dicom.canWriteXfer(xfer) || |
3811
890af7156f19
fix transcoding to jpeg baseline
Sebastien Jodogne <s.jodogne@gmail.com>
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3772
diff
changeset
|
1670 !dicom.validateMetaInfo(xfer, EWM_updateMeta).good()) |
890af7156f19
fix transcoding to jpeg baseline
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diff
changeset
|
1671 { |
890af7156f19
fix transcoding to jpeg baseline
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3772
diff
changeset
|
1672 return false; |
890af7156f19
fix transcoding to jpeg baseline
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diff
changeset
|
1673 } |
3872
b40dfa6dc8da
working on a simpler abstraction for transcoding
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diff
changeset
|
1674 else |
b40dfa6dc8da
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diff
changeset
|
1675 { |
b40dfa6dc8da
working on a simpler abstraction for transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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3811
diff
changeset
|
1676 dicom.removeInvalidGroups(); |
3883
795c9ca5eb91
DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
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parents:
3882
diff
changeset
|
1677 |
3885
e23026566536
removed unused functions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3883
diff
changeset
|
1678 if (known) |
3883
795c9ca5eb91
DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
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3882
diff
changeset
|
1679 { |
4696
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
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4695
diff
changeset
|
1680 CLOG(INFO, DICOM) << "Transcoded an image from transfer syntax " |
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
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diff
changeset
|
1681 << GetTransferSyntaxUid(sourceSyntax) << " to " |
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
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4695
diff
changeset
|
1682 << GetTransferSyntaxUid(syntax); |
3883
795c9ca5eb91
DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
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3882
diff
changeset
|
1683 } |
795c9ca5eb91
DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
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3882
diff
changeset
|
1684 else |
795c9ca5eb91
DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3882
diff
changeset
|
1685 { |
4696
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4695
diff
changeset
|
1686 CLOG(INFO, DICOM) << "Transcoded an image from unknown transfer syntax to " |
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
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4695
diff
changeset
|
1687 << GetTransferSyntaxUid(syntax); |
3883
795c9ca5eb91
DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
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3882
diff
changeset
|
1688 } |
795c9ca5eb91
DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
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3882
diff
changeset
|
1689 |
3872
b40dfa6dc8da
working on a simpler abstraction for transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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3811
diff
changeset
|
1690 return true; |
b40dfa6dc8da
working on a simpler abstraction for transcoding
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3811
diff
changeset
|
1691 } |
291
4d7469f72a0b
embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
1692 } |
4d7469f72a0b
embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
1693 } |
1360 | 1694 |
1695 | |
2006
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1696 ValueRepresentation FromDcmtkBridge::LookupValueRepresentation(const DicomTag& tag) |
1360 | 1697 { |
1698 DcmTag t(tag.GetGroup(), tag.GetElement()); | |
2006
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1699 return Convert(t.getEVR()); |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1700 } |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1701 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1702 ValueRepresentation FromDcmtkBridge::Convert(const DcmEVR vr) |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1703 { |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1704 switch (vr) |
1417
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1705 { |
2006
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1706 case EVR_AE: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1707 return ValueRepresentation_ApplicationEntity; |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1708 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1709 case EVR_AS: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1710 return ValueRepresentation_AgeString; |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1711 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1712 case EVR_AT: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1713 return ValueRepresentation_AttributeTag; |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1714 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1715 case EVR_CS: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1716 return ValueRepresentation_CodeString; |
1417
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1717 |
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1718 case EVR_DA: |
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1719 return ValueRepresentation_Date; |
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1720 |
2006
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1721 case EVR_DS: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1722 return ValueRepresentation_DecimalString; |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1723 |
1417
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1724 case EVR_DT: |
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1725 return ValueRepresentation_DateTime; |
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1726 |
2006
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1727 case EVR_FL: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1728 return ValueRepresentation_FloatingPointSingle; |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1729 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1730 case EVR_FD: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1731 return ValueRepresentation_FloatingPointDouble; |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1732 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1733 case EVR_IS: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1734 return ValueRepresentation_IntegerString; |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1735 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1736 case EVR_LO: |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1737 return ValueRepresentation_LongString; |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1738 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1739 case EVR_LT: |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1740 return ValueRepresentation_LongText; |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1741 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1742 case EVR_OB: |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1743 return ValueRepresentation_OtherByte; |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1744 |
3199
9316f341e40f
unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3198
diff
changeset
|
1745 #if DCMTK_VERSION_NUMBER >= 361 |
4696
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4695
diff
changeset
|
1746 case EVR_OD: |
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4695
diff
changeset
|
1747 return ValueRepresentation_OtherDouble; |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
1748 #endif |
2006
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1749 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1750 case EVR_OF: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1751 return ValueRepresentation_OtherFloat; |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1752 |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
1753 #if DCMTK_VERSION_NUMBER >= 362 |
4696
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4695
diff
changeset
|
1754 case EVR_OL: |
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4695
diff
changeset
|
1755 return ValueRepresentation_OtherLong; |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
1756 #endif |
2006
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1757 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1758 case EVR_OW: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1759 return ValueRepresentation_OtherWord; |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1760 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1761 case EVR_PN: |
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2006
diff
changeset
|
1762 return ValueRepresentation_PersonName; |
2006
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1763 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1764 case EVR_SH: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1765 return ValueRepresentation_ShortString; |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1766 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1767 case EVR_SL: |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1768 return ValueRepresentation_SignedLong; |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1769 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1770 case EVR_SQ: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1771 return ValueRepresentation_Sequence; |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1772 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1773 case EVR_SS: |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1774 return ValueRepresentation_SignedShort; |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1775 |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1776 case EVR_ST: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1777 return ValueRepresentation_ShortText; |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1778 |
1417
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1779 case EVR_TM: |
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1780 return ValueRepresentation_Time; |
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1781 |
3199
9316f341e40f
unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3198
diff
changeset
|
1782 #if DCMTK_VERSION_NUMBER >= 361 |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
1783 case EVR_UC: |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
1784 return ValueRepresentation_UnlimitedCharacters; |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
1785 #endif |
2006
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1786 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1787 case EVR_UI: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1788 return ValueRepresentation_UniqueIdentifier; |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1789 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1790 case EVR_UL: |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1791 return ValueRepresentation_UnsignedLong; |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1792 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1793 case EVR_UN: |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1794 return ValueRepresentation_Unknown; |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1795 |
3199
9316f341e40f
unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3198
diff
changeset
|
1796 #if DCMTK_VERSION_NUMBER >= 361 |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
1797 case EVR_UR: |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
1798 return ValueRepresentation_UniversalResource; |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
1799 #endif |
2006
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1800 |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1801 case EVR_US: |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1802 return ValueRepresentation_UnsignedShort; |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1803 |
6301bbcbcaed
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1804 case EVR_UT: |
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1805 return ValueRepresentation_UnlimitedText; |
1792 | 1806 |
1417
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1807 default: |
2006
6301bbcbcaed
more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1998
diff
changeset
|
1808 return ValueRepresentation_NotSupported; |
1417
8e23f16a198d
fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1368
diff
changeset
|
1809 } |
1360 | 1810 } |
1811 | |
1689 | 1812 |
3691
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
1813 DcmElement* FromDcmtkBridge::CreateElementForTag(const DicomTag& tag, |
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
1814 const std::string& privateCreator) |
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1691
diff
changeset
|
1815 { |
3691
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
1816 if (tag.IsPrivate() && |
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
1817 privateCreator.empty()) |
1693
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1691
diff
changeset
|
1818 { |
3691
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1819 // This solves issue 140 (Modifying private tags with REST API |
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1820 // changes VR from LO to UN) |
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1821 // https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
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1822 LOG(WARNING) << "Private creator should not be empty while creating a private tag: " << tag.Format(); |
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1823 } |
1689 | 1824 |
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1825 #if DCMTK_VERSION_NUMBER >= 362 |
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1826 DcmTag key(tag.GetGroup(), tag.GetElement()); |
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1827 if (tag.IsPrivate()) |
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1828 { |
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1829 return DcmItem::newDicomElement(key, privateCreator.c_str()); |
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1830 } |
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1831 else |
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1832 { |
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1833 return DcmItem::newDicomElement(key, NULL); |
1689 | 1834 } |
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1835 |
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1836 #else |
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1837 DcmTag key(tag.GetGroup(), tag.GetElement()); |
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1838 if (tag.IsPrivate()) |
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1839 { |
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1840 // https://forum.dcmtk.org/viewtopic.php?t=4527 |
3708 | 1841 LOG(WARNING) << "You are using DCMTK <= 3.6.1: All the private tags " |
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1842 "are considered as having a binary value representation"; |
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1843 key.setPrivateCreator(privateCreator.c_str()); |
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1844 return new DcmOtherByteOtherWord(key); |
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1845 } |
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1846 else |
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1847 { |
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1848 return newDicomElement(key); |
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1849 } |
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1850 #endif |
1689 | 1851 } |
1852 | |
1853 | |
1854 | |
1855 void FromDcmtkBridge::FillElementWithString(DcmElement& element, | |
1695 | 1856 const std::string& utf8Value, |
1818
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1857 bool decodeDataUriScheme, |
1695 | 1858 Encoding dicomEncoding) |
1689 | 1859 { |
1860 std::string binary; | |
1695 | 1861 const std::string* decoded = &utf8Value; |
1689 | 1862 |
1818
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1863 if (decodeDataUriScheme && |
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1864 boost::starts_with(utf8Value, URI_SCHEME_PREFIX_BINARY)) |
1689 | 1865 { |
1866 std::string mime; | |
1981
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1867 if (!Toolbox::DecodeDataUriScheme(mime, binary, utf8Value)) |
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1868 { |
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1869 throw OrthancException(ErrorCode_BadFileFormat); |
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1870 } |
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1871 |
1695 | 1872 decoded = &binary; |
1873 } | |
1874 else if (dicomEncoding != Encoding_Utf8) | |
1875 { | |
1876 binary = Toolbox::ConvertFromUtf8(utf8Value, dicomEncoding); | |
1689 | 1877 decoded = &binary; |
1878 } | |
1879 | |
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1880 if (IsBinaryTag(element.getTag())) |
1689 | 1881 { |
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1882 bool ok; |
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1883 |
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1884 switch (element.getTag().getEVR()) |
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1885 { |
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1886 case EVR_OW: |
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1887 if (decoded->size() % sizeof(Uint16) != 0) |
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1888 { |
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1889 LOG(ERROR) << "A tag with OW VR must have an even number of bytes"; |
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1890 ok = false; |
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1891 } |
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1892 else |
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1893 { |
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1894 ok = element.putUint16Array((const Uint16*) decoded->c_str(), decoded->size() / sizeof(Uint16)).good(); |
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1895 } |
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1896 |
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1897 break; |
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1898 |
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1899 default: |
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1900 ok = element.putUint8Array((const Uint8*) decoded->c_str(), decoded->size()).good(); |
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1901 break; |
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1902 } |
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1903 |
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1904 if (ok) |
1689 | 1905 { |
1906 return; | |
1907 } | |
1908 else | |
1909 { | |
1910 throw OrthancException(ErrorCode_InternalError); | |
1911 } | |
1912 } | |
1913 | |
1914 bool ok = false; | |
1915 | |
1916 try | |
1917 { | |
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1918 switch (element.getTag().getEVR()) |
1689 | 1919 { |
1920 // http://support.dcmtk.org/docs/dcvr_8h-source.html | |
1921 | |
1922 /** | |
1923 * TODO. | |
1924 **/ | |
1925 | |
1926 case EVR_OB: // other byte | |
1927 case EVR_OW: // other word | |
1928 throw OrthancException(ErrorCode_NotImplemented); | |
1929 | |
1930 case EVR_UN: // unknown value representation | |
1931 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
1932 | |
1933 | |
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1934 /** |
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1935 * String types. |
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1936 **/ |
1689 | 1937 |
1938 case EVR_DS: // decimal string | |
1939 case EVR_IS: // integer string | |
1940 case EVR_AS: // age string | |
1941 case EVR_DA: // date string | |
1942 case EVR_DT: // date time string | |
1943 case EVR_TM: // time string | |
1944 case EVR_AE: // application entity title | |
1945 case EVR_CS: // code string | |
1946 case EVR_SH: // short string | |
1947 case EVR_LO: // long string | |
1948 case EVR_ST: // short text | |
1949 case EVR_LT: // long text | |
1950 case EVR_UT: // unlimited text | |
1951 case EVR_PN: // person name | |
1952 case EVR_UI: // unique identifier | |
3209
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1953 #if DCMTK_VERSION_NUMBER >= 361 |
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1954 case EVR_UC: // unlimited characters |
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1955 case EVR_UR: // URI/URL |
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1956 #endif |
1689 | 1957 { |
1958 ok = element.putString(decoded->c_str()).good(); | |
1959 break; | |
1960 } | |
1961 | |
1962 | |
1963 /** | |
1964 * Numerical types | |
1965 **/ | |
1966 | |
1967 case EVR_SL: // signed long | |
1968 { | |
1969 ok = element.putSint32(boost::lexical_cast<Sint32>(*decoded)).good(); | |
1970 break; | |
1971 } | |
1972 | |
1973 case EVR_SS: // signed short | |
1974 { | |
1975 ok = element.putSint16(boost::lexical_cast<Sint16>(*decoded)).good(); | |
1976 break; | |
1977 } | |
1978 | |
1979 case EVR_UL: // unsigned long | |
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1980 #if DCMTK_VERSION_NUMBER >= 362 |
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1981 case EVR_OL: // other long (requires byte-swapping) |
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1982 #endif |
1689 | 1983 { |
1984 ok = element.putUint32(boost::lexical_cast<Uint32>(*decoded)).good(); | |
1985 break; | |
1986 } | |
1987 | |
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1988 case EVR_xs: // unsigned short, signed short or multiple values |
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1989 { |
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1990 if (decoded->find('\\') != std::string::npos) |
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1991 { |
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1992 ok = element.putString(decoded->c_str()).good(); |
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1993 } |
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1994 else if (decoded->find('-') != std::string::npos) |
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1995 { |
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1996 ok = element.putSint16(boost::lexical_cast<Sint16>(*decoded)).good(); |
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1997 } |
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1998 else |
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1999 { |
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2000 ok = element.putUint16(boost::lexical_cast<Uint16>(*decoded)).good(); |
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2001 } |
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2002 break; |
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2003 } |
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2004 |
1689 | 2005 case EVR_US: // unsigned short |
2006 { | |
2007 ok = element.putUint16(boost::lexical_cast<Uint16>(*decoded)).good(); | |
2008 break; | |
2009 } | |
2010 | |
2011 case EVR_FL: // float single-precision | |
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2012 case EVR_OF: // other float (requires byte swapping) |
1689 | 2013 { |
2014 ok = element.putFloat32(boost::lexical_cast<float>(*decoded)).good(); | |
2015 break; | |
2016 } | |
2017 | |
2018 case EVR_FD: // float double-precision | |
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2019 #if DCMTK_VERSION_NUMBER >= 361 |
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2020 case EVR_OD: // other double (requires byte-swapping) |
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2021 #endif |
1689 | 2022 { |
2023 ok = element.putFloat64(boost::lexical_cast<double>(*decoded)).good(); | |
2024 break; | |
2025 } | |
2026 | |
2027 | |
2028 /** | |
4663
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2029 * Other types |
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2030 **/ |
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2031 |
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2032 case EVR_AT: // attribute tag, new in Orthanc 1.9.4 |
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2033 { |
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2034 DicomTag value = ParseTag(utf8Value); |
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2035 ok = element.putTagVal(DcmTagKey(value.GetGroup(), value.GetElement())).good(); |
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|
2036 break; |
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Sebastien Jodogne <s.jodogne@gmail.com>
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2037 } |
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2038 |
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2039 |
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2040 /** |
1689 | 2041 * Sequence types, should never occur at this point. |
2042 **/ | |
2043 | |
2044 case EVR_SQ: // sequence of items | |
2045 { | |
2046 ok = false; | |
2047 break; | |
2048 } | |
2049 | |
2050 | |
2051 /** | |
2052 * Internal to DCMTK. | |
2053 **/ | |
2054 | |
2055 case EVR_ox: // OB or OW depending on context | |
2056 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name) | |
2057 case EVR_na: // na="not applicable", for data which has no VR | |
2058 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor | |
2059 case EVR_item: // used internally for items | |
2060 case EVR_metainfo: // used internally for meta info datasets | |
2061 case EVR_dataset: // used internally for datasets | |
2062 case EVR_fileFormat: // used internally for DICOM files | |
2063 case EVR_dicomDir: // used internally for DICOMDIR objects | |
2064 case EVR_dirRecord: // used internally for DICOMDIR records | |
2065 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image | |
2066 case EVR_pixelItem: // used internally for pixel items in a compressed image | |
2067 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR) | |
2068 case EVR_PixelData: // used internally for uncompressed pixeld data | |
2069 case EVR_OverlayData: // used internally for overlay data | |
2070 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR | |
2071 default: | |
2072 break; | |
2073 } | |
2074 } | |
2075 catch (boost::bad_lexical_cast&) | |
2076 { | |
2077 ok = false; | |
2078 } | |
2079 | |
2080 if (!ok) | |
2081 { | |
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2082 DicomTag tag(element.getTag().getGroup(), element.getTag().getElement()); |
2954
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2083 throw OrthancException(ErrorCode_BadFileFormat, |
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2084 "While creating a DICOM instance, tag (" + tag.Format() + |
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|
2085 ") has out-of-range value: \"" + (*decoded) + "\""); |
1689 | 2086 } |
2087 } | |
2088 | |
2089 | |
1693
558b25228a23
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2090 DcmElement* FromDcmtkBridge::FromJson(const DicomTag& tag, |
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|
2091 const Json::Value& value, |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
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1792
diff
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|
2092 bool decodeDataUriScheme, |
3691
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2093 Encoding dicomEncoding, |
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2094 const std::string& privateCreator) |
1689 | 2095 { |
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|
2096 std::unique_ptr<DcmElement> element; |
1689 | 2097 |
1690 | 2098 switch (value.type()) |
1689 | 2099 { |
1690 | 2100 case Json::stringValue: |
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2101 element.reset(CreateElementForTag(tag, privateCreator)); |
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|
2102 FillElementWithString(*element, value.asString(), decodeDataUriScheme, dicomEncoding); |
1690 | 2103 break; |
2104 | |
2216
9a8fab016145
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2209
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|
2105 case Json::nullValue: |
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2106 element.reset(CreateElementForTag(tag, privateCreator)); |
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2107 FillElementWithString(*element, "", decodeDataUriScheme, dicomEncoding); |
2216
9a8fab016145
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2209
diff
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|
2108 break; |
9a8fab016145
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parents:
2209
diff
changeset
|
2109 |
1690 | 2110 case Json::arrayValue: |
2111 { | |
4007
884b55ce01f6
Private tags returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
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3922
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changeset
|
2112 const char* p = NULL; |
4016
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Sebastien Jodogne <s.jodogne@gmail.com>
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4007
diff
changeset
|
2113 if (tag.IsPrivate() && |
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fix creation of sequence in private tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4007
diff
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|
2114 !privateCreator.empty()) |
4007
884b55ce01f6
Private tags returned by C-FIND SCP
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3922
diff
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|
2115 { |
884b55ce01f6
Private tags returned by C-FIND SCP
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3922
diff
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|
2116 p = privateCreator.c_str(); |
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Private tags returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
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3922
diff
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|
2117 } |
884b55ce01f6
Private tags returned by C-FIND SCP
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3922
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|
2118 |
884b55ce01f6
Private tags returned by C-FIND SCP
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parents:
3922
diff
changeset
|
2119 DcmTag key(tag.GetGroup(), tag.GetElement(), p); |
1690 | 2120 if (key.getEVR() != EVR_SQ) |
2121 { | |
4007
884b55ce01f6
Private tags returned by C-FIND SCP
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3922
diff
changeset
|
2122 throw OrthancException(ErrorCode_BadParameterType, |
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Private tags returned by C-FIND SCP
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3922
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changeset
|
2123 "Bad Parameter type for tag " + tag.Format()); |
1690 | 2124 } |
2125 | |
2287
9f3414878c02
Fix Debian #865606 (orthanc FTBFS with libdcmtk-dev 3.6.1~20170228-2)
Sebastien Jodogne <s.jodogne@gmail.com>
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2275
diff
changeset
|
2126 DcmSequenceOfItems* sequence = new DcmSequenceOfItems(key); |
1690 | 2127 element.reset(sequence); |
2128 | |
2129 for (Json::Value::ArrayIndex i = 0; i < value.size(); i++) | |
2130 { | |
3712
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|
2131 std::unique_ptr<DcmItem> item(new DcmItem); |
1690 | 2132 |
2830 | 2133 switch (value[i].type()) |
1690 | 2134 { |
2830 | 2135 case Json::objectValue: |
2136 { | |
2137 Json::Value::Members members = value[i].getMemberNames(); | |
2138 for (Json::Value::ArrayIndex j = 0; j < members.size(); j++) | |
2139 { | |
3691
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diff
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|
2140 item->insert(FromJson(ParseTag(members[j]), value[i][members[j]], decodeDataUriScheme, dicomEncoding, privateCreator)); |
2830 | 2141 } |
2831 | 2142 break; |
2830 | 2143 } |
2144 | |
2145 case Json::arrayValue: | |
2831 | 2146 { |
2830 | 2147 // Lua cannot disambiguate between an empty dictionary |
2148 // and an empty array | |
2149 if (value[i].size() != 0) | |
2150 { | |
2151 throw OrthancException(ErrorCode_BadParameterType); | |
2152 } | |
2153 break; | |
2831 | 2154 } |
2830 | 2155 |
2156 default: | |
2157 throw OrthancException(ErrorCode_BadParameterType); | |
1690 | 2158 } |
2159 | |
2160 sequence->append(item.release()); | |
2161 } | |
2162 | |
2163 break; | |
2164 } | |
2165 | |
2166 default: | |
3895 | 2167 throw OrthancException(ErrorCode_BadParameterType, "Bad Parameter type for tag " + tag.Format()); |
1689 | 2168 } |
2169 | |
2170 return element.release(); | |
2171 } | |
1765
57b9e6890482
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Sebastien Jodogne <s.jodogne@gmail.com>
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1739
diff
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|
2172 |
57b9e6890482
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1739
diff
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|
2173 |
1924
6c73df12ca51
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diff
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|
2174 DcmPixelSequence* FromDcmtkBridge::GetPixelSequence(DcmDataset& dataset) |
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diff
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|
2175 { |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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1900
diff
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|
2176 DcmElement *element = NULL; |
1927
b60f27664b8f
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1924
diff
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|
2177 if (!dataset.findAndGetElement(DCM_PixelData, element).good()) |
1924
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diff
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|
2178 { |
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1900
diff
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|
2179 throw OrthancException(ErrorCode_BadFileFormat); |
6c73df12ca51
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diff
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|
2180 } |
6c73df12ca51
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diff
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|
2181 |
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diff
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|
2182 DcmPixelData& pixelData = dynamic_cast<DcmPixelData&>(*element); |
3922
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2183 |
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|
2184 E_TransferSyntax repType; |
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|
2185 const DcmRepresentationParameter *repParam = NULL; |
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|
2186 pixelData.getCurrentRepresentationKey(repType, repParam); |
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|
2187 |
1924
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|
2188 DcmPixelSequence* pixelSequence = NULL; |
3922
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|
2189 if (!pixelData.getEncapsulatedRepresentation(repType, repParam, pixelSequence).good()) |
1924
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diff
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|
2190 { |
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|
2191 return NULL; |
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2192 } |
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2193 else |
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|
2194 { |
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diff
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|
2195 return pixelSequence; |
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2196 } |
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diff
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|
2197 } |
1934
72a2fd7fed8b
FromDcmtkBridge::FromJson
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diff
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|
2198 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
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diff
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|
2199 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
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diff
changeset
|
2200 Encoding FromDcmtkBridge::ExtractEncoding(const Json::Value& json, |
72a2fd7fed8b
FromDcmtkBridge::FromJson
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diff
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|
2201 Encoding defaultEncoding) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
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diff
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|
2202 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
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diff
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|
2203 if (json.type() != Json::objectValue) |
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FromDcmtkBridge::FromJson
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diff
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|
2204 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
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diff
changeset
|
2205 throw OrthancException(ErrorCode_BadParameterType); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
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diff
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|
2206 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
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diff
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|
2207 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
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diff
changeset
|
2208 Encoding encoding = defaultEncoding; |
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FromDcmtkBridge::FromJson
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diff
changeset
|
2209 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2210 const Json::Value::Members tags = json.getMemberNames(); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2211 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2212 // Look for SpecificCharacterSet (0008,0005) in the JSON file |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2213 for (size_t i = 0; i < tags.size(); i++) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2214 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2215 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2216 if (tag == DICOM_TAG_SPECIFIC_CHARACTER_SET) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2217 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2218 const Json::Value& value = json[tags[i]]; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2219 if (value.type() != Json::stringValue || |
2216
9a8fab016145
sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2209
diff
changeset
|
2220 (value.asString().length() != 0 && |
9a8fab016145
sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2209
diff
changeset
|
2221 !GetDicomEncoding(encoding, value.asCString()))) |
1934
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2222 { |
2954
d924f9bb61cc
taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2223 throw OrthancException(ErrorCode_BadRequest, |
d924f9bb61cc
taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2224 "Unknown encoding while creating DICOM from JSON: " + |
d924f9bb61cc
taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2225 value.toStyledString()); |
1934
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2226 } |
2216
9a8fab016145
sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2209
diff
changeset
|
2227 |
9a8fab016145
sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2209
diff
changeset
|
2228 if (value.asString().length() == 0) |
9a8fab016145
sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2209
diff
changeset
|
2229 { |
9a8fab016145
sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2209
diff
changeset
|
2230 return defaultEncoding; |
9a8fab016145
sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2209
diff
changeset
|
2231 } |
1934
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2232 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2233 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2234 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2235 return encoding; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2236 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2237 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2238 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2239 static void SetString(DcmDataset& target, |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2240 const DcmTag& tag, |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2241 const std::string& value) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2242 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2243 if (!target.putAndInsertString(tag, value.c_str()).good()) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2244 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2245 throw OrthancException(ErrorCode_InternalError); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2246 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2247 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2248 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2249 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2250 DcmDataset* FromDcmtkBridge::FromJson(const Json::Value& json, // Encoded using UTF-8 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2251 bool generateIdentifiers, |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2252 bool decodeDataUriScheme, |
3691
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
2253 Encoding defaultEncoding, |
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
2254 const std::string& privateCreator) |
1934
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2255 { |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3708
diff
changeset
|
2256 std::unique_ptr<DcmDataset> result(new DcmDataset); |
1934
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2257 Encoding encoding = ExtractEncoding(json, defaultEncoding); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2258 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2259 SetString(*result, DCM_SpecificCharacterSet, GetDicomSpecificCharacterSet(encoding)); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2260 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2261 const Json::Value::Members tags = json.getMemberNames(); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2262 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2263 bool hasPatientId = false; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2264 bool hasStudyInstanceUid = false; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2265 bool hasSeriesInstanceUid = false; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2266 bool hasSopInstanceUid = false; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2267 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2268 for (size_t i = 0; i < tags.size(); i++) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2269 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2270 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2271 const Json::Value& value = json[tags[i]]; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2272 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2273 if (tag == DICOM_TAG_PATIENT_ID) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2274 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2275 hasPatientId = true; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2276 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2277 else if (tag == DICOM_TAG_STUDY_INSTANCE_UID) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2278 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2279 hasStudyInstanceUid = true; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2280 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2281 else if (tag == DICOM_TAG_SERIES_INSTANCE_UID) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2282 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2283 hasSeriesInstanceUid = true; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2284 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2285 else if (tag == DICOM_TAG_SOP_INSTANCE_UID) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2286 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2287 hasSopInstanceUid = true; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2288 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2289 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2290 if (tag != DICOM_TAG_SPECIFIC_CHARACTER_SET) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2291 { |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3708
diff
changeset
|
2292 std::unique_ptr<DcmElement> element(FromDcmtkBridge::FromJson(tag, value, decodeDataUriScheme, encoding, privateCreator)); |
4200 | 2293 |
2294 result->findAndDeleteElement(element->getTag()); | |
1934
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2295 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2296 DcmElement* tmp = element.release(); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2297 if (!result->insert(tmp, false, false).good()) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2298 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2299 delete tmp; |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2300 throw OrthancException(ErrorCode_InternalError); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2301 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2302 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2303 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2304 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2305 if (!hasPatientId && |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2306 generateIdentifiers) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2307 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2308 SetString(*result, DCM_PatientID, GenerateUniqueIdentifier(ResourceType_Patient)); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2309 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2310 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2311 if (!hasStudyInstanceUid && |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2312 generateIdentifiers) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2313 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2314 SetString(*result, DCM_StudyInstanceUID, GenerateUniqueIdentifier(ResourceType_Study)); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2315 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2316 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2317 if (!hasSeriesInstanceUid && |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2318 generateIdentifiers) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2319 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2320 SetString(*result, DCM_SeriesInstanceUID, GenerateUniqueIdentifier(ResourceType_Series)); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2321 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2322 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2323 if (!hasSopInstanceUid && |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2324 generateIdentifiers) |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2325 { |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2326 SetString(*result, DCM_SOPInstanceUID, GenerateUniqueIdentifier(ResourceType_Instance)); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2327 } |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2328 |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2329 return result.release(); |
72a2fd7fed8b
FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1930
diff
changeset
|
2330 } |
1935
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2331 |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2332 |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2333 DcmFileFormat* FromDcmtkBridge::LoadFromMemoryBuffer(const void* buffer, |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2334 size_t size) |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2335 { |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2336 DcmInputBufferStream is; |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2337 if (size > 0) |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2338 { |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2339 is.setBuffer(buffer, size); |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2340 } |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2341 is.setEos(); |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2342 |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3708
diff
changeset
|
2343 std::unique_ptr<DcmFileFormat> result(new DcmFileFormat); |
1935
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2344 |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2345 result->transferInit(); |
3771
74889e6f6d68
fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3769
diff
changeset
|
2346 |
74889e6f6d68
fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3769
diff
changeset
|
2347 /** |
74889e6f6d68
fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3769
diff
changeset
|
2348 * New in Orthanc 1.6.0: The "size" is given as an argument to the |
74889e6f6d68
fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3769
diff
changeset
|
2349 * "read()" method. This can avoid huge memory consumption if |
74889e6f6d68
fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3769
diff
changeset
|
2350 * parsing an invalid DICOM file, which can notably been observed |
74889e6f6d68
fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3769
diff
changeset
|
2351 * by executing the integration test "test_upload_compressed" on |
74889e6f6d68
fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3769
diff
changeset
|
2352 * valgrind running Orthanc. |
74889e6f6d68
fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3769
diff
changeset
|
2353 **/ |
74889e6f6d68
fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3769
diff
changeset
|
2354 if (!result->read(is, EXS_Unknown, EGL_noChange, size).good()) |
1935
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2355 { |
2954
d924f9bb61cc
taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2356 throw OrthancException(ErrorCode_BadFileFormat, |
d924f9bb61cc
taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2357 "Cannot parse an invalid DICOM file (size: " + |
d924f9bb61cc
taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2358 boost::lexical_cast<std::string>(size) + " bytes)"); |
1935
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2359 } |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2360 |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2361 result->loadAllDataIntoMemory(); |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2362 result->transferEnd(); |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2363 |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2364 return result.release(); |
e251606c1433
FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1934
diff
changeset
|
2365 } |
1998
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2366 |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2367 |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2368 void FromDcmtkBridge::FromJson(DicomMap& target, |
5011
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2369 const Json::Value& source, |
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2370 const char* fieldName) |
1998
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2371 { |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2372 if (source.type() != Json::objectValue) |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2373 { |
5011
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2374 if (fieldName != NULL) |
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2375 { |
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2376 throw OrthancException(ErrorCode_BadFileFormat, std::string("Expecting an object in field '") + std::string(fieldName) + std::string("'")); |
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2377 } |
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2378 else |
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2379 { |
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2380 throw OrthancException(ErrorCode_BadFileFormat, "Expecting an object"); |
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2381 } |
1998
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2382 } |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2383 |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2384 target.Clear(); |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2385 |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2386 Json::Value::Members members = source.getMemberNames(); |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2387 |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2388 for (size_t i = 0; i < members.size(); i++) |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2389 { |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2390 const Json::Value& value = source[members[i]]; |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2391 |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2392 if (value.type() != Json::stringValue) |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2393 { |
5011
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2394 throw OrthancException(ErrorCode_BadFileFormat, std::string("Expecting a string in field '") + members[i] + std::string("'")); |
1998
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2395 } |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2396 |
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2006
diff
changeset
|
2397 target.SetValue(ParseTag(members[i]), value.asString(), false); |
1998
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2398 } |
9b61701c35f2
New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
2399 } |
2207
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2400 |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2401 |
5011
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2402 |
c014ab79fca5
fixed /move documentation + improved error reporting
Alain Mazy <am@osimis.io>
parents:
4981
diff
changeset
|
2403 |
2207
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2404 void FromDcmtkBridge::ChangeStringEncoding(DcmItem& dataset, |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2405 Encoding source, |
3217
cf8cbeb35f33
preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3209
diff
changeset
|
2406 bool hasSourceCodeExtensions, |
2207
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2407 Encoding target) |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2408 { |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2409 // Recursive exploration of a dataset to change the encoding of |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2410 // each string-like element |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2411 |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2412 if (source == target) |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2413 { |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2414 return; |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2415 } |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2416 |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2417 for (unsigned long i = 0; i < dataset.card(); i++) |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2418 { |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2419 DcmElement* element = dataset.getElement(i); |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2420 if (element) |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2421 { |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2422 if (element->isLeaf()) |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2423 { |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2424 char *c = NULL; |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2425 if (element->isaString() && |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2426 element->getString(c).good() && |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2427 c != NULL) |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2428 { |
3217
cf8cbeb35f33
preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3209
diff
changeset
|
2429 std::string a = Toolbox::ConvertToUtf8(c, source, hasSourceCodeExtensions); |
2207
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2430 std::string b = Toolbox::ConvertFromUtf8(a, target); |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2431 element->putString(b.c_str()); |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2432 } |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2433 } |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2434 else |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2435 { |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2436 // "All subclasses of DcmElement except for DcmSequenceOfItems |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2437 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2438 // etc. are not." The following dynamic_cast is thus OK. |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2439 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(*element); |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2440 |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2441 for (unsigned long j = 0; j < sequence.card(); j++) |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2442 { |
3217
cf8cbeb35f33
preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3209
diff
changeset
|
2443 ChangeStringEncoding(*sequence.getItem(j), source, hasSourceCodeExtensions, target); |
2207
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2444 } |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2445 } |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2446 } |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2447 } |
6dc3bdb4088b
Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2172
diff
changeset
|
2448 } |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2207
diff
changeset
|
2449 |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2207
diff
changeset
|
2450 |
2381
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2451 void FromDcmtkBridge::InitializeCodecs() |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2452 { |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2453 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1 |
4696
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4695
diff
changeset
|
2454 CLOG(INFO, DICOM) << "Registering JPEG Lossless codecs in DCMTK"; |
3727
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2455 DJLSDecoderRegistration::registerCodecs(); |
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2456 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1 |
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2457 DJLSEncoderRegistration::registerCodecs(); |
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2458 # endif |
2381
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2459 #endif |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2460 |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2461 #if ORTHANC_ENABLE_DCMTK_JPEG == 1 |
4696
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4695
diff
changeset
|
2462 CLOG(INFO, DICOM) << "Registering JPEG codecs in DCMTK"; |
5306
155637655710
Disabled automatic conversion from YBR to RGB when transcoding JPEG to RAW transfer-syntax
Alain Mazy <am@osimis.io>
parents:
5273
diff
changeset
|
2463 DJDecoderRegistration::registerCodecs(EDC_never); // disable automatic conversion from YBR to RGB when transcoding JPEG to RAW transfer-syntax (https://discourse.orthanc-server.org/t/orthanc-convert-ybr-to-rgb-but-does-not-change-metadata/3533) |
3727
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2464 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1 |
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2465 DJEncoderRegistration::registerCodecs(); |
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2466 # endif |
2381
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2467 #endif |
3748
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
2468 |
4696
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4695
diff
changeset
|
2469 CLOG(INFO, DICOM) << "Registering RLE codecs in DCMTK"; |
3748
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
2470 DcmRLEDecoderRegistration::registerCodecs(); |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
2471 #if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1 |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
2472 DcmRLEEncoderRegistration::registerCodecs(); |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
2473 #endif |
2381
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2474 } |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2475 |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2476 |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2477 void FromDcmtkBridge::FinalizeCodecs() |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2478 { |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2479 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1 |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2480 // Unregister JPEG-LS codecs |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2481 DJLSDecoderRegistration::cleanup(); |
3727
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2482 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1 |
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2483 DJLSEncoderRegistration::cleanup(); |
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2484 # endif |
2381
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2485 #endif |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2486 |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2487 #if ORTHANC_ENABLE_DCMTK_JPEG == 1 |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2488 // Unregister JPEG codecs |
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2489 DJDecoderRegistration::cleanup(); |
3727
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2490 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1 |
3743
33c19a6643e1
creating IDicomTranscoder abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3730
diff
changeset
|
2491 DJEncoderRegistration::cleanup(); |
3727
090022f1b5e1
auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3712
diff
changeset
|
2492 # endif |
2381
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2493 #endif |
3748
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
2494 |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
2495 DcmRLEDecoderRegistration::cleanup(); |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
2496 #if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1 |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
2497 DcmRLEEncoderRegistration::cleanup(); |
ca36e3f1112c
transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3743
diff
changeset
|
2498 #endif |
2381
b8969010b534
uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2364
diff
changeset
|
2499 } |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2500 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2501 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2502 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2503 // Forward declaration |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2504 static bool ApplyVisitorToElement(DcmElement& element, |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2505 ITagVisitor& visitor, |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2506 const std::vector<DicomTag>& parentTags, |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2507 const std::vector<size_t>& parentIndexes, |
3217
cf8cbeb35f33
preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3209
diff
changeset
|
2508 Encoding encoding, |
cf8cbeb35f33
preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3209
diff
changeset
|
2509 bool hasCodeExtensions); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2510 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2511 static void ApplyVisitorToDataset(DcmItem& dataset, |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2512 ITagVisitor& visitor, |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2513 const std::vector<DicomTag>& parentTags, |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2514 const std::vector<size_t>& parentIndexes, |
3217
cf8cbeb35f33
preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3209
diff
changeset
|
2515 Encoding encoding, |
cf8cbeb35f33
preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3209
diff
changeset
|
2516 bool hasCodeExtensions) |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2517 { |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2518 assert(parentTags.size() == parentIndexes.size()); |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2519 |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2520 std::set<DcmTagKey> toRemove; |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2521 |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2522 for (unsigned long i = 0; i < dataset.card(); i++) |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2523 { |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2524 DcmElement* element = dataset.getElement(i); |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2525 if (element == NULL) |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2526 { |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2527 throw OrthancException(ErrorCode_InternalError); |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2528 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2529 else |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2530 { |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2531 if (!ApplyVisitorToElement(*element, visitor, parentTags, parentIndexes, encoding, hasCodeExtensions)) |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2532 { |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2533 toRemove.insert(element->getTag()); |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2534 } |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2535 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2536 } |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2537 |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2538 // Remove all the tags that were planned for removal (cf. ITagVisitor::Action_Remove) |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2539 for (std::set<DcmTagKey>::const_iterator |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2540 it = toRemove.begin(); it != toRemove.end(); ++it) |
b51c08bd5c38
added ITagVisitor::Action_Remove
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changeset
|
2541 { |
b51c08bd5c38
added ITagVisitor::Action_Remove
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|
2542 std::unique_ptr<DcmElement> tmp(dataset.remove(*it)); |
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added ITagVisitor::Action_Remove
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2543 } |
2499
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|
2544 } |
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|
2545 |
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|
2546 |
4734
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added ITagVisitor::Action_Remove
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diff
changeset
|
2547 // Returns "true" iff the element must be kept. If "false" is |
b51c08bd5c38
added ITagVisitor::Action_Remove
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diff
changeset
|
2548 // returned, the element will be removed. |
b51c08bd5c38
added ITagVisitor::Action_Remove
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changeset
|
2549 static bool ApplyVisitorToLeaf(DcmElement& element, |
2499
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2550 ITagVisitor& visitor, |
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2551 const std::vector<DicomTag>& parentTags, |
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|
2552 const std::vector<size_t>& parentIndexes, |
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|
2553 const DicomTag& tag, |
3217
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preliminary support of Korean character set
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2554 Encoding encoding, |
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|
2555 bool hasCodeExtensions) |
2499
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2556 { |
3198
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|
2557 // TODO - Merge this function, that is more recent, with ConvertLeafElement() |
2499
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|
2558 |
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|
2559 assert(element.isLeaf()); |
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2560 |
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|
2561 DcmEVR evr = element.getTag().getEVR(); |
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2562 |
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|
2563 |
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|
2564 /** |
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2565 * Fix the EVR for types internal to DCMTK |
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|
2566 **/ |
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2567 |
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2568 if (evr == EVR_ox) // OB or OW depending on context |
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|
2569 { |
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|
2570 evr = EVR_OB; |
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|
2571 } |
5173
f9ab3aec3bed
Fix issue 214: VOILUTSequence is not returned in Wado-RS
Alain Mazy <am@osimis.io>
parents:
5151
diff
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|
2572 else if (evr == EVR_xs) // SS or US depending on context |
f9ab3aec3bed
Fix issue 214: VOILUTSequence is not returned in Wado-RS
Alain Mazy <am@osimis.io>
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diff
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|
2573 { |
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|
2574 // So far we assume that it's alway US (as a best guess: https://forum.dcmtk.org/viewtopic.php?t=932) |
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diff
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|
2575 // However, e.g. in a LUTDescriptor (3 values), the middle value can be a SS depending on other tag values while first and third value are always US. |
f9ab3aec3bed
Fix issue 214: VOILUTSequence is not returned in Wado-RS
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parents:
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diff
changeset
|
2576 // This patch, although not perfect fixes https://bugs.orthanc-server.com/show_bug.cgi?id=214. |
f9ab3aec3bed
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|
2577 // It might need some rework once we encounter a LUTDescriptor with a SS value. ref: https://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_C.11.2.html#sect_C.11.2.1.1 |
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Alain Mazy <am@osimis.io>
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|
2578 evr = EVR_US; |
f9ab3aec3bed
Fix issue 214: VOILUTSequence is not returned in Wado-RS
Alain Mazy <am@osimis.io>
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diff
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|
2579 } |
f9ab3aec3bed
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Alain Mazy <am@osimis.io>
parents:
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diff
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|
2580 else if (evr == EVR_lt) // US, SS or OW depending on context, used for LUT Data (thus the name) |
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Alain Mazy <am@osimis.io>
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|
2581 { |
f9ab3aec3bed
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Alain Mazy <am@osimis.io>
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diff
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|
2582 // best guess is OW: final user should be able to interpret it correctly depending on the context |
f9ab3aec3bed
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Alain Mazy <am@osimis.io>
parents:
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diff
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|
2583 evr = EVR_OW; |
f9ab3aec3bed
Fix issue 214: VOILUTSequence is not returned in Wado-RS
Alain Mazy <am@osimis.io>
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|
2584 } |
3198
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|
2585 |
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|
2586 if (evr == EVR_UNKNOWN || // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR) |
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|
2587 evr == EVR_UNKNOWN2B) // used internally for elements with unknown VR with 2-byte length field in explicit VR |
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|
2588 { |
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|
2589 evr = EVR_UN; |
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|
2590 } |
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|
2591 |
4737
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|
2592 if (evr == EVR_UN) |
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|
2593 { |
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diff
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2594 // New in Orthanc 1.9.5 |
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2595 DictionaryLocker locker; |
979ae3ea3381
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2596 |
979ae3ea3381
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|
2597 const DcmDictEntry* entry = locker->findEntry(element.getTag().getXTag(), |
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2598 element.getTag().getPrivateCreator()); |
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2599 |
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|
2600 if (entry != NULL) |
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2601 { |
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|
2602 evr = entry->getEVR(); |
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2603 } |
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|
2604 } |
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|
2605 |
3198
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|
2606 const ValueRepresentation vr = FromDcmtkBridge::Convert(evr); |
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|
2607 |
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|
2608 |
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|
2609 /** |
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|
2610 * Deal with binary data (including PixelData). |
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2611 **/ |
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|
2612 |
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2613 if (evr == EVR_OB || // other byte |
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|
2614 evr == EVR_OW || // other word |
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|
2615 evr == EVR_UN) // unknown value representation |
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2616 { |
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|
2617 Uint16* data16 = NULL; |
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2618 Uint8* data = NULL; |
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2619 |
4734
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2620 ITagVisitor::Action action; |
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2621 |
4528
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2622 if ((element.getTag() == DCM_PixelData || // (*) New in Orthanc 1.9.1 |
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2623 evr == EVR_OW) && |
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2624 element.getUint16Array(data16) == EC_Normal) |
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2625 { |
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2626 action = visitor.VisitBinary(parentTags, parentIndexes, tag, vr, data16, element.getLength()); |
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2627 } |
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2628 else if (evr != EVR_OW && |
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2629 element.getUint8Array(data) == EC_Normal) |
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2630 { |
4528
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2631 /** |
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2632 * WARNING: The call to "getUint8Array()" crashes |
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2633 * (segmentation fault) on big-endian architectures if applied |
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2634 * to pixel data, during the call to "swapIfNecessary()" in |
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2635 * "DcmPolymorphOBOW::getUint8Array()" (this method is not |
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2636 * reimplemented in derived class "DcmPixelData"). However, |
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2637 * "getUint16Array()" works correctly, hence (*). |
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2638 **/ |
4734
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2639 action = visitor.VisitBinary(parentTags, parentIndexes, tag, vr, data, element.getLength()); |
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2640 } |
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2641 else |
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2642 { |
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2643 action = visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr); |
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2644 } |
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2645 |
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2646 switch (action) |
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2647 { |
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2648 case ITagVisitor::Action_None: |
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2649 return true; // We're done |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2650 |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2651 case ITagVisitor::Action_Remove: |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2652 return false; |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2653 |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2654 case ITagVisitor::Action_Replace: |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2655 throw OrthancException(ErrorCode_NotImplemented, "Iterator cannot replace binary data"); |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2656 |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2657 default: |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2658 throw OrthancException(ErrorCode_ParameterOutOfRange); |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2659 } |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2660 } |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2661 |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2662 |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2663 /** |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2664 * Deal with plain strings (and convert them to UTF-8) |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2665 **/ |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2666 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2667 char *c = NULL; |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2668 if (element.isaString() && |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2669 element.getString(c).good()) |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2670 { |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2671 std::string utf8; |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2672 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2673 if (c != NULL) // This case corresponds to the empty string |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2674 { |
3448
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3302
diff
changeset
|
2675 if (element.getTag() == DCM_SpecificCharacterSet) |
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3302
diff
changeset
|
2676 { |
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3302
diff
changeset
|
2677 utf8.assign(c); |
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3302
diff
changeset
|
2678 } |
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3302
diff
changeset
|
2679 else |
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3302
diff
changeset
|
2680 { |
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3302
diff
changeset
|
2681 std::string s(c); |
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3302
diff
changeset
|
2682 utf8 = Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions); |
b3bdd6dc10f2
don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3302
diff
changeset
|
2683 } |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2684 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2685 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2686 std::string newValue; |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2687 ITagVisitor::Action action = visitor.VisitString |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2688 (newValue, parentTags, parentIndexes, tag, vr, utf8); |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2689 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2690 switch (action) |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2691 { |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2692 case ITagVisitor::Action_None: |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2693 return true; |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2694 |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2695 case ITagVisitor::Action_Remove: |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2696 return false; |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2697 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2698 case ITagVisitor::Action_Replace: |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2699 { |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2700 std::string s = Toolbox::ConvertFromUtf8(newValue, encoding); |
2522
ce2dfba9417c
fix build with dcmtk 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2513
diff
changeset
|
2701 if (element.putString(s.c_str()) != EC_Normal) |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2702 { |
2954
d924f9bb61cc
taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2703 throw OrthancException(ErrorCode_InternalError, |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2704 "Iterator cannot replace value of tag: " + tag.Format()); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2705 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2706 |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2707 return true; |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2708 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2709 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2710 default: |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2711 throw OrthancException(ErrorCode_InternalError); |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2712 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2713 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2714 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2715 |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2716 ITagVisitor::Action action; |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2717 |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2718 try |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2719 { |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2720 // http://support.dcmtk.org/docs/dcvr_8h-source.html |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2721 switch (evr) |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2722 { |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2723 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2724 /** |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2725 * Plain string values. |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2726 **/ |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2727 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2728 case EVR_DS: // decimal string |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2729 case EVR_IS: // integer string |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2730 case EVR_AS: // age string |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2731 case EVR_DA: // date string |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2732 case EVR_DT: // date time string |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2733 case EVR_TM: // time string |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2734 case EVR_AE: // application entity title |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2735 case EVR_CS: // code string |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2736 case EVR_SH: // short string |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2737 case EVR_LO: // long string |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2738 case EVR_ST: // short text |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2739 case EVR_LT: // long text |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2740 case EVR_UT: // unlimited text |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2741 case EVR_PN: // person name |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2742 case EVR_UI: // unique identifier |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2743 { |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2744 Uint8* data = NULL; |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2745 |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2746 if (element.getUint8Array(data) == EC_Normal) |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2747 { |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2748 const Uint32 length = element.getLength(); |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2749 Uint32 l = 0; |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2750 while (l < length && |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2751 data[l] != 0) |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2752 { |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2753 l++; |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2754 } |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2755 |
4951
e100fd9db29b
enlarged support of tags with UN value representation in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4870
diff
changeset
|
2756 std::string ignored; |
e100fd9db29b
enlarged support of tags with UN value representation in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4870
diff
changeset
|
2757 std::string s(reinterpret_cast<const char*>(data), l); |
e100fd9db29b
enlarged support of tags with UN value representation in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4870
diff
changeset
|
2758 action = visitor.VisitString(ignored, parentTags, parentIndexes, tag, vr, |
e100fd9db29b
enlarged support of tags with UN value representation in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4870
diff
changeset
|
2759 Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions)); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2760 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2761 else |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2762 { |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2763 action = visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2764 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2765 |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2766 if (action == ITagVisitor::Action_Replace) |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2767 { |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2768 LOG(WARNING) << "Iterator cannot replace this string tag: " |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2769 << FromDcmtkBridge::GetTagName(element) |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2770 << " (" << tag.Format() << ")"; |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2771 return true; |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2772 } |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2773 |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2774 break; |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2775 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2776 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2777 /** |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2778 * Numeric types |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2779 **/ |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2780 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2781 case EVR_SL: // signed long |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2782 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2783 DcmSignedLong& content = dynamic_cast<DcmSignedLong&>(element); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2784 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2785 std::vector<int64_t> values; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2786 values.reserve(content.getVM()); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2787 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2788 for (unsigned long i = 0; i < content.getVM(); i++) |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2789 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2790 Sint32 f; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2791 if (content.getSint32(f, i).good()) |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2792 { |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2793 values.push_back(f); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2794 } |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2795 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2796 |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2797 action = visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2798 break; |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2799 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2800 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2801 case EVR_SS: // signed short |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2802 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2803 DcmSignedShort& content = dynamic_cast<DcmSignedShort&>(element); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2804 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2805 std::vector<int64_t> values; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2806 values.reserve(content.getVM()); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2807 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2808 for (unsigned long i = 0; i < content.getVM(); i++) |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2809 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2810 Sint16 f; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2811 if (content.getSint16(f, i).good()) |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2812 { |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2813 values.push_back(f); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2814 } |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2815 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2816 |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2817 action = visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2818 break; |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2819 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2820 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2821 case EVR_UL: // unsigned long |
3691
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
2822 #if DCMTK_VERSION_NUMBER >= 362 |
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
2823 case EVR_OL: |
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
2824 #endif |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2825 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2826 DcmUnsignedLong& content = dynamic_cast<DcmUnsignedLong&>(element); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2827 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2828 std::vector<int64_t> values; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2829 values.reserve(content.getVM()); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2830 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2831 for (unsigned long i = 0; i < content.getVM(); i++) |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2832 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2833 Uint32 f; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2834 if (content.getUint32(f, i).good()) |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2835 { |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2836 values.push_back(f); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2837 } |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2838 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2839 |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2840 action = visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2841 break; |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2842 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2843 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2844 case EVR_US: // unsigned short |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2845 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2846 DcmUnsignedShort& content = dynamic_cast<DcmUnsignedShort&>(element); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2847 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2848 std::vector<int64_t> values; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2849 values.reserve(content.getVM()); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2850 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2851 for (unsigned long i = 0; i < content.getVM(); i++) |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2852 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2853 Uint16 f; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2854 if (content.getUint16(f, i).good()) |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2855 { |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2856 values.push_back(f); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2857 } |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2858 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2859 |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2860 action = visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2861 break; |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2862 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2863 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2864 case EVR_FL: // float single-precision |
3691
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
2865 case EVR_OF: |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2866 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2867 DcmFloatingPointSingle& content = dynamic_cast<DcmFloatingPointSingle&>(element); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2868 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2869 std::vector<double> values; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2870 values.reserve(content.getVM()); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2871 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2872 for (unsigned long i = 0; i < content.getVM(); i++) |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2873 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2874 Float32 f; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2875 if (content.getFloat32(f, i).good()) |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2876 { |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2877 values.push_back(f); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2878 } |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2879 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2880 |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2881 action = visitor.VisitDoubles(parentTags, parentIndexes, tag, vr, values); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2882 break; |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2883 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2884 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2885 case EVR_FD: // float double-precision |
3691
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
2886 #if DCMTK_VERSION_NUMBER >= 361 |
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
2887 case EVR_OD: |
4922bdd046dd
Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3651
diff
changeset
|
2888 #endif |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2889 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2890 DcmFloatingPointDouble& content = dynamic_cast<DcmFloatingPointDouble&>(element); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2891 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2892 std::vector<double> values; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2893 values.reserve(content.getVM()); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2894 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2895 for (unsigned long i = 0; i < content.getVM(); i++) |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2896 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2897 Float64 f; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2898 if (content.getFloat64(f, i).good()) |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2899 { |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2900 values.push_back(f); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2901 } |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2902 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2903 |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2904 action = visitor.VisitDoubles(parentTags, parentIndexes, tag, vr, values); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2905 break; |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2906 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2907 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2908 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2909 /** |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2910 * Attribute tag. |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2911 **/ |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2912 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2913 case EVR_AT: |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2914 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2915 DcmAttributeTag& content = dynamic_cast<DcmAttributeTag&>(element); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2916 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2917 std::vector<DicomTag> values; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2918 values.reserve(content.getVM()); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2919 |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2920 for (unsigned long i = 0; i < content.getVM(); i++) |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2921 { |
3194
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2922 DcmTagKey f; |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2923 if (content.getTagVal(f, i).good()) |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2924 { |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2925 DicomTag t(f.getGroup(), f.getElement()); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2926 values.push_back(t); |
47ef29168698
support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3156
diff
changeset
|
2927 } |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2928 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2929 |
3195 | 2930 assert(vr == ValueRepresentation_AttributeTag); |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2931 action = visitor.VisitAttributes(parentTags, parentIndexes, tag, values); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2932 break; |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2933 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2934 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2935 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2936 /** |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2937 * Sequence types, should never occur at this point because of |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2938 * "element.isLeaf()". |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2939 **/ |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2940 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2941 case EVR_SQ: // sequence of items |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2942 { |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2943 return true; |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2944 } |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2945 |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2946 |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2947 /** |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2948 * Internal to DCMTK. |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2949 **/ |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2950 |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2951 case EVR_xs: // SS or US depending on context |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2952 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name) |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2953 case EVR_na: // na="not applicable", for data which has no VR |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2954 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2955 case EVR_item: // used internally for items |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2956 case EVR_metainfo: // used internally for meta info datasets |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2957 case EVR_dataset: // used internally for datasets |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2958 case EVR_fileFormat: // used internally for DICOM files |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2959 case EVR_dicomDir: // used internally for DICOMDIR objects |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2960 case EVR_dirRecord: // used internally for DICOMDIR records |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2961 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2962 case EVR_pixelItem: // used internally for pixel items in a compressed image |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2963 case EVR_PixelData: // used internally for uncompressed pixeld data |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2470
diff
changeset
|
2964 case EVR_OverlayData: // used internally for overlay data |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2965 { |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2966 action = visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr); |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2967 break; |
3198
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2968 } |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2969 |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2970 |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2971 /** |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2972 * Default case. |
7724ed267b5c
unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3195
diff
changeset
|
2973 **/ |
2499
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ITagVisitor - for anonymization relationships
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diff
changeset
|
2974 |
83b8b6743531
ITagVisitor - for anonymization relationships
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diff
changeset
|
2975 default: |
4734
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2976 return true; |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2977 } |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2978 |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2979 switch (action) |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2980 { |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2981 case ITagVisitor::Action_None: |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2982 return true; // We're done |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2983 |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2984 case ITagVisitor::Action_Remove: |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2985 return false; |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2986 |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2987 case ITagVisitor::Action_Replace: |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2988 throw OrthancException(ErrorCode_NotImplemented, "Iterator cannot replace non-string-like data"); |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2989 |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2990 default: |
b51c08bd5c38
added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
2991 throw OrthancException(ErrorCode_ParameterOutOfRange); |
2499
83b8b6743531
ITagVisitor - for anonymization relationships
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parents:
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diff
changeset
|
2992 } |
83b8b6743531
ITagVisitor - for anonymization relationships
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parents:
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diff
changeset
|
2993 } |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2994 catch (boost::bad_lexical_cast&) |
83b8b6743531
ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2995 { |
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added ITagVisitor::Action_Remove
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diff
changeset
|
2996 return true; |
2499
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diff
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|
2997 } |
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diff
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|
2998 catch (std::bad_cast&) |
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diff
changeset
|
2999 { |
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diff
changeset
|
3000 return true; |
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diff
changeset
|
3001 } |
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diff
changeset
|
3002 } |
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diff
changeset
|
3003 |
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diff
changeset
|
3004 |
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b51c08bd5c38
added ITagVisitor::Action_Remove
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parents:
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diff
changeset
|
3005 // Returns "true" iff the element must be kept. If "false" is |
b51c08bd5c38
added ITagVisitor::Action_Remove
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parents:
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diff
changeset
|
3006 // returned, the element will be removed. |
b51c08bd5c38
added ITagVisitor::Action_Remove
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diff
changeset
|
3007 static bool ApplyVisitorToElement(DcmElement& element, |
2499
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|
3008 ITagVisitor& visitor, |
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diff
changeset
|
3009 const std::vector<DicomTag>& parentTags, |
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diff
changeset
|
3010 const std::vector<size_t>& parentIndexes, |
3217
cf8cbeb35f33
preliminary support of Korean character set
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parents:
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diff
changeset
|
3011 Encoding encoding, |
cf8cbeb35f33
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parents:
3209
diff
changeset
|
3012 bool hasCodeExtensions) |
2499
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|
3013 { |
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diff
changeset
|
3014 assert(parentTags.size() == parentIndexes.size()); |
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diff
changeset
|
3015 |
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diff
changeset
|
3016 DicomTag tag(FromDcmtkBridge::Convert(element.getTag())); |
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changeset
|
3017 |
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diff
changeset
|
3018 if (element.isLeaf()) |
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diff
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|
3019 { |
4734
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added ITagVisitor::Action_Remove
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diff
changeset
|
3020 return ApplyVisitorToLeaf(element, visitor, parentTags, parentIndexes, tag, encoding, hasCodeExtensions); |
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3021 } |
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|
3022 else |
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|
3023 { |
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diff
changeset
|
3024 // "All subclasses of DcmElement except for DcmSequenceOfItems |
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diff
changeset
|
3025 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset |
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diff
changeset
|
3026 // etc. are not." The following dynamic_cast is thus OK. |
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diff
changeset
|
3027 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element); |
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diff
changeset
|
3028 |
4737
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DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3029 ITagVisitor::Action action = visitor.VisitSequence(parentTags, parentIndexes, tag, sequence.card()); |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
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|
3030 |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3031 switch (action) |
3195 | 3032 { |
4737
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3033 case ITagVisitor::Action_None: |
979ae3ea3381
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diff
changeset
|
3034 if (sequence.card() != 0) // Minor optimization to avoid creating "tags" and "indexes" if not needed |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3035 { |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3036 std::vector<DicomTag> tags = parentTags; |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3037 std::vector<size_t> indexes = parentIndexes; |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3038 tags.push_back(tag); |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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parents:
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diff
changeset
|
3039 indexes.push_back(0); |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3040 |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3041 for (unsigned long i = 0; i < sequence.card(); i++) |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3042 { |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3043 indexes.back() = static_cast<size_t>(i); |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3044 DcmItem* child = sequence.getItem(i); |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3045 ApplyVisitorToDataset(*child, visitor, tags, indexes, encoding, hasCodeExtensions); |
979ae3ea3381
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diff
changeset
|
3046 } |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3047 } |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3048 |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3049 return true; // Keep |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3050 |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4734
diff
changeset
|
3051 case ITagVisitor::Action_Remove: |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3052 return false; |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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parents:
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diff
changeset
|
3053 |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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parents:
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diff
changeset
|
3054 case ITagVisitor::Action_Replace: |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3055 throw OrthancException(ErrorCode_NotImplemented, "Iterator cannot replace sequences"); |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3056 |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3057 default: |
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3058 throw OrthancException(ErrorCode_ParameterOutOfRange); |
3195 | 3059 } |
4737
979ae3ea3381
DANGEROUS commit: Anonymization is now also applied to nested sequences
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diff
changeset
|
3060 |
2499
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diff
changeset
|
3061 } |
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diff
changeset
|
3062 } |
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parents:
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diff
changeset
|
3063 |
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ITagVisitor - for anonymization relationships
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parents:
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diff
changeset
|
3064 |
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ITagVisitor - for anonymization relationships
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diff
changeset
|
3065 void FromDcmtkBridge::Apply(DcmItem& dataset, |
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diff
changeset
|
3066 ITagVisitor& visitor, |
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diff
changeset
|
3067 Encoding defaultEncoding) |
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diff
changeset
|
3068 { |
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changeset
|
3069 std::vector<DicomTag> parentTags; |
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diff
changeset
|
3070 std::vector<size_t> parentIndexes; |
3217
cf8cbeb35f33
preliminary support of Korean character set
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parents:
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diff
changeset
|
3071 bool hasCodeExtensions; |
cf8cbeb35f33
preliminary support of Korean character set
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parents:
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diff
changeset
|
3072 Encoding encoding = DetectEncoding(hasCodeExtensions, dataset, defaultEncoding); |
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preliminary support of Korean character set
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parents:
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diff
changeset
|
3073 ApplyVisitorToDataset(dataset, visitor, parentTags, parentIndexes, encoding, hasCodeExtensions); |
2499
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diff
changeset
|
3074 } |
3882
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implemented IDicomTranscoder::Store()
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parents:
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diff
changeset
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3075 |
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implemented IDicomTranscoder::Store()
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diff
changeset
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3076 |
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implemented IDicomTranscoder::Store()
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diff
changeset
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3077 |
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implemented IDicomTranscoder::Store()
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parents:
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diff
changeset
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3078 bool FromDcmtkBridge::LookupOrthancTransferSyntax(DicomTransferSyntax& target, |
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implemented IDicomTranscoder::Store()
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diff
changeset
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3079 DcmFileFormat& dicom) |
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implemented IDicomTranscoder::Store()
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diff
changeset
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3080 { |
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implemented IDicomTranscoder::Store()
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parents:
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diff
changeset
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3081 if (dicom.getDataset() == NULL) |
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implemented IDicomTranscoder::Store()
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diff
changeset
|
3082 { |
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implemented IDicomTranscoder::Store()
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parents:
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diff
changeset
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3083 throw OrthancException(ErrorCode_InternalError); |
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implemented IDicomTranscoder::Store()
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parents:
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diff
changeset
|
3084 } |
4334
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Fix access to videos as a single raw frame
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diff
changeset
|
3085 else |
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diff
changeset
|
3086 { |
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diff
changeset
|
3087 return LookupOrthancTransferSyntax(target, *dicom.getDataset()); |
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diff
changeset
|
3088 } |
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diff
changeset
|
3089 } |
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Fix access to videos as a single raw frame
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diff
changeset
|
3090 |
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Fix access to videos as a single raw frame
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parents:
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diff
changeset
|
3091 |
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Fix access to videos as a single raw frame
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diff
changeset
|
3092 bool FromDcmtkBridge::LookupOrthancTransferSyntax(DicomTransferSyntax& target, |
b2366bc023f8
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diff
changeset
|
3093 DcmDataset& dataset) |
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diff
changeset
|
3094 { |
3883
795c9ca5eb91
DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
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diff
changeset
|
3095 E_TransferSyntax xfer = dataset.getCurrentXfer(); |
3882
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implemented IDicomTranscoder::Store()
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diff
changeset
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3096 if (xfer == EXS_Unknown) |
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implemented IDicomTranscoder::Store()
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diff
changeset
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3097 { |
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implemented IDicomTranscoder::Store()
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diff
changeset
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3098 dataset.updateOriginalXfer(); |
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implemented IDicomTranscoder::Store()
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diff
changeset
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3099 xfer = dataset.getOriginalXfer(); |
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implemented IDicomTranscoder::Store()
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diff
changeset
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3100 if (xfer == EXS_Unknown) |
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implemented IDicomTranscoder::Store()
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diff
changeset
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3101 { |
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implemented IDicomTranscoder::Store()
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diff
changeset
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3102 throw OrthancException(ErrorCode_BadFileFormat, |
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implemented IDicomTranscoder::Store()
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diff
changeset
|
3103 "Cannot determine the transfer syntax of the DICOM instance"); |
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implemented IDicomTranscoder::Store()
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diff
changeset
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3104 } |
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implemented IDicomTranscoder::Store()
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diff
changeset
|
3105 } |
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implemented IDicomTranscoder::Store()
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diff
changeset
|
3106 |
904575738462
implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3881
diff
changeset
|
3107 return FromDcmtkBridge::LookupOrthancTransferSyntax(target, xfer); |
904575738462
implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3881
diff
changeset
|
3108 } |
4501
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3109 |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3110 |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3111 void FromDcmtkBridge::LogMissingTagsForStore(DcmDataset& dicom) |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3112 { |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3113 std::string patientId, studyInstanceUid, seriesInstanceUid, sopInstanceUid; |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3114 |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3115 const char* c = NULL; |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3116 if (dicom.findAndGetString(DCM_PatientID, c).good() && |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3117 c != NULL) |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3118 { |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3119 patientId.assign(c); |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3120 } |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3121 |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3122 c = NULL; |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3123 if (dicom.findAndGetString(DCM_StudyInstanceUID, c).good() && |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3124 c != NULL) |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3125 { |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3126 studyInstanceUid.assign(c); |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3127 } |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3128 |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3129 c = NULL; |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3130 if (dicom.findAndGetString(DCM_SeriesInstanceUID, c).good() && |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3131 c != NULL) |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3132 { |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3133 seriesInstanceUid.assign(c); |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3134 } |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3135 |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3136 c = NULL; |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3137 if (dicom.findAndGetString(DCM_SOPInstanceUID, c).good() && |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3138 c != NULL) |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3139 { |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3140 sopInstanceUid.assign(c); |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3141 } |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3142 |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3143 DicomMap::LogMissingTagsForStore(patientId, studyInstanceUid, seriesInstanceUid, sopInstanceUid); |
11c2ddb4e2ca
FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4476
diff
changeset
|
3144 } |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3145 |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3146 |
4770
248408d2b336
hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4737
diff
changeset
|
3147 void FromDcmtkBridge::IDicomPathVisitor::ApplyInternal(FromDcmtkBridge::IDicomPathVisitor& visitor, |
248408d2b336
hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4737
diff
changeset
|
3148 DcmItem& item, |
248408d2b336
hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4737
diff
changeset
|
3149 const DicomPath& pattern, |
248408d2b336
hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4737
diff
changeset
|
3150 const DicomPath& actualPath) |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3151 { |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3152 const size_t level = actualPath.GetPrefixLength(); |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3153 |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3154 if (level == pattern.GetPrefixLength()) |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3155 { |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3156 visitor.Visit(item, actualPath); |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3157 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3158 else |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3159 { |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3160 assert(level < pattern.GetPrefixLength()); |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3161 |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3162 const DicomTag& tmp = pattern.GetPrefixTag(level); |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3163 DcmTagKey tag(tmp.GetGroup(), tmp.GetElement()); |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3164 |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3165 DcmSequenceOfItems *sequence = NULL; |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3166 if (item.findAndGetSequence(tag, sequence).good() && |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3167 sequence != NULL) |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3168 { |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3169 for (unsigned long i = 0; i < sequence->card(); i++) |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3170 { |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3171 if (pattern.IsPrefixUniversal(level) || |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3172 pattern.GetPrefixIndex(level) == static_cast<size_t>(i)) |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3173 { |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3174 DcmItem *child = sequence->getItem(i); |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3175 if (child != NULL) |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3176 { |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3177 DicomPath childPath = actualPath; |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3178 childPath.AddIndexedTagToPrefix(pattern.GetPrefixTag(level), static_cast<size_t>(i)); |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3179 |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3180 ApplyInternal(visitor, *child, pattern, childPath); |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3181 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3182 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3183 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3184 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3185 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3186 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3187 |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3188 |
4770
248408d2b336
hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4737
diff
changeset
|
3189 void FromDcmtkBridge::IDicomPathVisitor::Apply(IDicomPathVisitor& visitor, |
248408d2b336
hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4737
diff
changeset
|
3190 DcmDataset& dataset, |
248408d2b336
hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4737
diff
changeset
|
3191 const DicomPath& path) |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3192 { |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3193 DicomPath actualPath(path.GetFinalTag()); |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3194 ApplyInternal(visitor, dataset, path, actualPath); |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3195 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3196 |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3197 |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3198 void FromDcmtkBridge::RemovePath(DcmDataset& dataset, |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3199 const DicomPath& path) |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3200 { |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3201 class Visitor : public FromDcmtkBridge::IDicomPathVisitor |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3202 { |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3203 public: |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3204 virtual void Visit(DcmItem& item, |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3205 const DicomPath& path) ORTHANC_OVERRIDE |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3206 { |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3207 DcmTagKey key(path.GetFinalTag().GetGroup(), path.GetFinalTag().GetElement()); |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3208 std::unique_ptr<DcmElement> removed(item.remove(key)); |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3209 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3210 }; |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3211 |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3212 Visitor visitor; |
4770
248408d2b336
hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4737
diff
changeset
|
3213 IDicomPathVisitor::Apply(visitor, dataset, path); |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3214 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3215 |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3216 |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3217 void FromDcmtkBridge::ClearPath(DcmDataset& dataset, |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3218 const DicomPath& path, |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3219 bool onlyIfExists) |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3220 { |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3221 class Visitor : public FromDcmtkBridge::IDicomPathVisitor |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3222 { |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3223 public: |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3224 bool onlyIfExists_; |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3225 |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3226 public: |
4690 | 3227 explicit Visitor(bool onlyIfExists) : |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3228 onlyIfExists_(onlyIfExists) |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3229 { |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3230 } |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3231 |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3232 virtual void Visit(DcmItem& item, |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3233 const DicomPath& path) ORTHANC_OVERRIDE |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3234 { |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3235 DcmTagKey key(path.GetFinalTag().GetGroup(), path.GetFinalTag().GetElement()); |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3236 |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3237 if (onlyIfExists_ && |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3238 !item.tagExists(key)) |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3239 { |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3240 // The tag is non-existing, do not clear it |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3241 } |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3242 else |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3243 { |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3244 if (!item.insertEmptyElement(key, OFTrue /* replace old value */).good()) |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3245 { |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3246 throw OrthancException(ErrorCode_InternalError); |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3247 } |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3248 } |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3249 } |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3250 }; |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3251 |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3252 Visitor visitor(onlyIfExists); |
4770
248408d2b336
hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4737
diff
changeset
|
3253 IDicomPathVisitor::Apply(visitor, dataset, path); |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3254 } |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3255 |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3256 |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3257 void FromDcmtkBridge::ReplacePath(DcmDataset& dataset, |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3258 const DicomPath& path, |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3259 const DcmElement& element, |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3260 DicomReplaceMode mode) |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3261 { |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3262 class Visitor : public FromDcmtkBridge::IDicomPathVisitor |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3263 { |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3264 private: |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3265 std::unique_ptr<DcmElement> element_; |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3266 DicomReplaceMode mode_; |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3267 |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3268 public: |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3269 Visitor(const DcmElement& element, |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3270 DicomReplaceMode mode) : |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3271 element_(dynamic_cast<DcmElement*>(element.clone())), |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3272 mode_(mode) |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3273 { |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3274 if (element_.get() == NULL) |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3275 { |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3276 throw OrthancException(ErrorCode_InternalError, "Cannot clone DcmElement"); |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3277 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3278 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3279 |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3280 virtual void Visit(DcmItem& item, |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3281 const DicomPath& path) ORTHANC_OVERRIDE |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3282 { |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3283 std::unique_ptr<DcmElement> cloned(dynamic_cast<DcmElement*>(element_->clone())); |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3284 if (cloned.get() == NULL) |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3285 { |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3286 throw OrthancException(ErrorCode_InternalError, "Cannot clone DcmElement"); |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3287 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3288 else |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3289 { |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3290 DcmTagKey key(path.GetFinalTag().GetGroup(), path.GetFinalTag().GetElement()); |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3291 |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3292 if (!item.tagExists(key)) |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3293 { |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3294 switch (mode_) |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3295 { |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3296 case DicomReplaceMode_InsertIfAbsent: |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3297 break; // Fine, we can proceed with insertion |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3298 |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3299 case DicomReplaceMode_ThrowIfAbsent: |
7182f5732480
use of DicomPath in ParsedDicomFile
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parents:
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diff
changeset
|
3300 throw OrthancException(ErrorCode_InexistentItem, "Cannot replace inexistent tag: " + GetTagName(*element_)); |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3301 |
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use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3302 case DicomReplaceMode_IgnoreIfAbsent: |
7182f5732480
use of DicomPath in ParsedDicomFile
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parents:
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diff
changeset
|
3303 return; // Don't proceed with insertion |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3304 |
7182f5732480
use of DicomPath in ParsedDicomFile
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diff
changeset
|
3305 default: |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
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4682
diff
changeset
|
3306 throw OrthancException(ErrorCode_ParameterOutOfRange); |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3307 } |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3308 } |
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3309 |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3310 if (!item.insert(cloned.release(), OFTrue /* replace old */).good()) |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3311 { |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3312 throw OrthancException(ErrorCode_InternalError, "Cannot replace an element: " + GetTagName(*element_)); |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3313 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3314 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3315 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3316 }; |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3317 |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3318 DcmTagKey key(path.GetFinalTag().GetGroup(), path.GetFinalTag().GetElement()); |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3319 |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3320 if (element.getTag() != key) |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3321 { |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3322 throw OrthancException(ErrorCode_ParameterOutOfRange, |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3323 "The final tag must be the same as the tag of the element during a replacement"); |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3324 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3325 else |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3326 { |
4683
7182f5732480
use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4682
diff
changeset
|
3327 Visitor visitor(element, mode); |
4770
248408d2b336
hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4737
diff
changeset
|
3328 IDicomPathVisitor::Apply(visitor, dataset, path); |
4682
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3329 } |
d38a7040474a
FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4663
diff
changeset
|
3330 } |
4771
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3331 |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3332 |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4771
diff
changeset
|
3333 bool FromDcmtkBridge::LookupSequenceItem(DicomMap& target, |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4771
diff
changeset
|
3334 DcmDataset& dataset, |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4771
diff
changeset
|
3335 const DicomPath& path, |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4771
diff
changeset
|
3336 size_t sequenceIndex) |
4771
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3337 { |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3338 class Visitor : public FromDcmtkBridge::IDicomPathVisitor |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3339 { |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3340 private: |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3341 bool found_; |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3342 DicomMap& target_; |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3343 size_t sequenceIndex_; |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3344 |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3345 public: |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3346 Visitor(DicomMap& target, |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3347 size_t sequenceIndex) : |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3348 found_(false), |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3349 target_(target), |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3350 sequenceIndex_(sequenceIndex) |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3351 { |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3352 } |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3353 |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3354 virtual void Visit(DcmItem& item, |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3355 const DicomPath& path) ORTHANC_OVERRIDE |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3356 { |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3357 DcmTagKey tag(path.GetFinalTag().GetGroup(), path.GetFinalTag().GetElement()); |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3358 |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3359 DcmSequenceOfItems *sequence = NULL; |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3360 |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3361 if (item.findAndGetSequence(tag, sequence).good() && |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3362 sequence != NULL && |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3363 sequenceIndex_ < sequence->card()) |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3364 { |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3365 std::set<DicomTag> ignoreTagLength; |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3366 ExtractDicomSummary(target_, *sequence->getItem(sequenceIndex_), 0, ignoreTagLength); |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3367 found_ = true; |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3368 } |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3369 } |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3370 |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3371 bool HasFound() const |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3372 { |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3373 return found_; |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3374 } |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3375 }; |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3376 |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3377 Visitor visitor(target, sequenceIndex); |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3378 IDicomPathVisitor::Apply(visitor, dataset, path); |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3379 return visitor.HasFound(); |
9f207131c7f4
added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4770
diff
changeset
|
3380 } |
4953
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3381 |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3382 |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3383 bool FromDcmtkBridge::LookupStringValue(std::string& target, |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3384 DcmDataset& dataset, |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3385 const DicomTag& key) |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3386 { |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3387 DcmTagKey dcmkey(key.GetGroup(), key.GetElement()); |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3388 |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3389 const char* str = NULL; |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3390 const Uint8* data = NULL; |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3391 unsigned long size = 0; |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3392 |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3393 if (dataset.findAndGetString(dcmkey, str).good() && |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3394 str != NULL) |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3395 { |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3396 target.assign(str); |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3397 return true; |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3398 } |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3399 else if (dataset.findAndGetUint8Array(dcmkey, data, &size).good() && |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3400 data != NULL && |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3401 size > 0) |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3402 { |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3403 /** |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3404 * This special case is necessary for borderline DICOM files |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3405 * that have DICOM tags have the "UN" value representation. New |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3406 * in Orthanc 1.10.1. |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3407 * https://groups.google.com/g/orthanc-users/c/86fobx3ZyoM/m/KBG17un6AQAJ |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3408 **/ |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3409 unsigned long l = 0; |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3410 while (l < size && |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3411 data[l] != 0) |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3412 { |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3413 l++; |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3414 } |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3415 |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3416 target.assign(reinterpret_cast<const char*>(data), l); |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3417 return true; |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3418 } |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3419 else |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3420 { |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3421 return false; |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4951
diff
changeset
|
3422 } |
60cb4b379485
added FromDcmtkBridge::LookupStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3423 } |
0 | 3424 } |
3730
ae31ba2b09a6
toolbox: LookupTransferSyntax()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3727
diff
changeset
|
3425 |
ae31ba2b09a6
toolbox: LookupTransferSyntax()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3727
diff
changeset
|
3426 |
ae31ba2b09a6
toolbox: LookupTransferSyntax()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3727
diff
changeset
|
3427 #include "./FromDcmtkBridge_TransferSyntaxes.impl.h" |