orthanc: Core/DicomParsing/FromDcmtkBridge.cpp annotate

annotate Core/DicomParsing/FromDcmtkBridge.cpp @ 3769:eb044cc49d51

compatibility with DCMTK 3.6.0

author	Sebastien Jodogne <s.jodogne@gmail.com>
date	Tue, 17 Mar 2020 16:36:14 +0100
parents	33c19a6643e1
children	66e18aad0654 74889e6f6d68

rev	line source
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1 /**
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	2 * Orthanc - A Lightweight, RESTful DICOM Store
1900 b1291df2f780 2016 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1876 diff changeset	3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288 6e7e5ed91c2d upgrade to year 2015 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1147 diff changeset	4 * Department, University Hospital of Liege, Belgium
3640 94f4a18a79cc upgrade to year 2020 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3594 diff changeset	5 * Copyright (C) 2017-2020 Osimis S.A., Belgium
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	6 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	7 * This program is free software: you can redistribute it and/or
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	8 * modify it under the terms of the GNU General Public License as
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	9 * published by the Free Software Foundation, either version 3 of the
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	10 * License, or (at your option) any later version.
136 fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	11 *
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	12 * In addition, as a special exception, the copyright holders of this
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	13 * program give permission to link the code of its release with the
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	15 * that use the same license as the "OpenSSL" library), and distribute
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	16 * the linked executables. You must obey the GNU General Public License
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	17 * in all respects for all of the code used other than "OpenSSL". If you
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	18 * modify file(s) with this exception, you may extend this exception to
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	19 * your version of the file(s), but you are not obligated to do so. If
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	20 * you do not wish to do so, delete this exception statement from your
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	21 * version. If you delete this exception statement from all source files
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	22 * in the program, then also delete it here.
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	23 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	24 * This program is distributed in the hope that it will be useful, but
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	25 * WITHOUT ANY WARRANTY; without even the implied warranty of
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	27 * General Public License for more details.
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	28 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	29 * You should have received a copy of the GNU General Public License
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	31 **/
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	32
448 9d830dcc7730 missing copyright information Sebastien Jodogne <s.jodogne@gmail.com> parents: 419 diff changeset	33
2382 7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	34 #include "../PrecompiledHeaders.h"
824 a811bdf8b8eb precompiled headers Sebastien Jodogne <s.jodogne@gmail.com> parents: 799 diff changeset	35
71 aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	36 #ifndef NOMINMAX
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	37 #define NOMINMAX
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	38 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	39
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	40 #if !defined(ORTHANC_SANDBOXED)
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	41 # error The macro ORTHANC_SANDBOXED must be defined
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	42 #endif
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	43
3117 c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	44 #if !defined(DCMTK_VERSION_NUMBER)
c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	45 # error The macro DCMTK_VERSION_NUMBER must be defined
c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	46 #endif
c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	47
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	48 #include "FromDcmtkBridge.h"
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	49 #include "ToDcmtkBridge.h"
3712 2a170a8f1faf replacing std::auto_ptr by std::unique_ptr Sebastien Jodogne <s.jodogne@gmail.com> parents: 3708 diff changeset	50 #include "../Compatibility.h"
2382 7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	51 #include "../Logging.h"
7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	52 #include "../Toolbox.h"
7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	53 #include "../OrthancException.h"
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	54
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	55 #if ORTHANC_SANDBOXED == 0
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	56 # include "../TemporaryFile.h"
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	57 #endif
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	58
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	59 #include <list>
71 aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	60 #include <limits>
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	61
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	62 #include <boost/lexical_cast.hpp>
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	63 #include <boost/filesystem.hpp>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	64 #include <boost/algorithm/string/predicate.hpp>
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	65 #include <boost/algorithm/string/join.hpp>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	66
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	67 #include <dcmtk/dcmdata/dcdeftag.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	68 #include <dcmtk/dcmdata/dcdicent.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	69 #include <dcmtk/dcmdata/dcdict.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	70 #include <dcmtk/dcmdata/dcfilefo.h>
3769 eb044cc49d51 compatibility with DCMTK 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3743 diff changeset	71 #include <dcmtk/dcmdata/dcistrmb.h>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	72 #include <dcmtk/dcmdata/dcostrmb.h>
b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	73 #include <dcmtk/dcmdata/dcpixel.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	74 #include <dcmtk/dcmdata/dcuid.h>
3769 eb044cc49d51 compatibility with DCMTK 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3743 diff changeset	75 #include <dcmtk/dcmdata/dcxfer.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	76
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	77 #include <dcmtk/dcmdata/dcvrae.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	78 #include <dcmtk/dcmdata/dcvras.h>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	79 #include <dcmtk/dcmdata/dcvrat.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	80 #include <dcmtk/dcmdata/dcvrcs.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	81 #include <dcmtk/dcmdata/dcvrda.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	82 #include <dcmtk/dcmdata/dcvrds.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	83 #include <dcmtk/dcmdata/dcvrdt.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	84 #include <dcmtk/dcmdata/dcvrfd.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	85 #include <dcmtk/dcmdata/dcvrfl.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	86 #include <dcmtk/dcmdata/dcvris.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	87 #include <dcmtk/dcmdata/dcvrlo.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	88 #include <dcmtk/dcmdata/dcvrlt.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	89 #include <dcmtk/dcmdata/dcvrpn.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	90 #include <dcmtk/dcmdata/dcvrsh.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	91 #include <dcmtk/dcmdata/dcvrsl.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	92 #include <dcmtk/dcmdata/dcvrss.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	93 #include <dcmtk/dcmdata/dcvrst.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	94 #include <dcmtk/dcmdata/dcvrtm.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	95 #include <dcmtk/dcmdata/dcvrui.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	96 #include <dcmtk/dcmdata/dcvrul.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	97 #include <dcmtk/dcmdata/dcvrus.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	98 #include <dcmtk/dcmdata/dcvrut.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	99
3209 f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3199 diff changeset	100 #if DCMTK_VERSION_NUMBER >= 361
f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3199 diff changeset	101 # include <dcmtk/dcmdata/dcvruc.h>
f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3199 diff changeset	102 # include <dcmtk/dcmdata/dcvrur.h>
f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3199 diff changeset	103 #endif
f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3199 diff changeset	104
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	105 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	106 # include <EmbeddedResources.h>
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	107 #endif
682 efc4928be6fb Recover pixel data for more transfer syntaxes (notably JPEG) Sebastien Jodogne <s.jodogne@gmail.com> parents: 677 diff changeset	108
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	109 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	110 # include <dcmtk/dcmjpeg/djdecode.h>
3727 090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	111 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	112 # include <dcmtk/dcmjpeg/djencode.h>
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	113 # endif
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	114 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	115
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	116 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	117 # include <dcmtk/dcmjpls/djdecode.h>
3727 090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	118 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	119 # include <dcmtk/dcmjpls/djencode.h>
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	120 # endif
1930 1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	121 #endif
1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	122
1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	123
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	124 namespace Orthanc
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	125 {
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	126 static bool IsBinaryTag(const DcmTag& key)
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	127 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	128 return (key.isUnknownVR() \|\|
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	129 key.getEVR() == EVR_OB \|\|
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	130 key.getEVR() == EVR_OW \|\|
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	131 key.getEVR() == EVR_UN \|\|
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	132 key.getEVR() == EVR_ox);
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	133 }
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	134
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	135
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	136 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	137 static void LoadEmbeddedDictionary(DcmDataDictionary& dictionary,
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	138 EmbeddedResources::FileResourceId resource)
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	139 {
2017 08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	140 std::string content;
08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	141 EmbeddedResources::GetFileResource(content, resource);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	142
2513 97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	143 #if ORTHANC_SANDBOXED == 0
2143 fd5875662670 creation of namespace SystemToolbox Sebastien Jodogne <s.jodogne@gmail.com> parents: 2142 diff changeset	144 TemporaryFile tmp;
2017 08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	145 tmp.Write(content);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	146
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	147 if (!dictionary.loadDictionary(tmp.GetPath().c_str()))
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	148 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	149 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	150 "Cannot read embedded dictionary. Under Windows, make sure that "
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	151 "your TEMP directory does not contain special characters.");
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	152 }
2513 97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	153 #else
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	154 if (!dictionary.loadFromMemory(content))
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	155 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	156 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	157 "Cannot read embedded dictionary. Under Windows, make sure that "
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	158 "your TEMP directory does not contain special characters.");
2513 97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	159 }
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	160 #endif
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	161 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	162 #endif
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	163
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	164
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	165 namespace
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	166 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	167 class DictionaryLocker
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	168 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	169 private:
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	170 DcmDataDictionary& dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	171
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	172 public:
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	173 DictionaryLocker() : dictionary_(dcmDataDict.wrlock())
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	174 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	175 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	176
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	177 ~DictionaryLocker()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	178 {
3117 c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	179 #if DCMTK_VERSION_NUMBER >= 364
c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	180 dcmDataDict.wrunlock();
c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	181 #else
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	182 dcmDataDict.unlock();
3117 c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	183 #endif
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	184 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	185
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	186 DcmDataDictionary& operator*()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	187 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	188 return dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	189 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	190
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	191 DcmDataDictionary* operator->()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	192 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	193 return &dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	194 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	195 };
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	196
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	197
3594 0654d0838de8 disable thread support in DCMTK if wasm/asm.js Sebastien Jodogne <s.jodogne@gmail.com> parents: 3577 diff changeset	198 #define DCMTK_TO_CTYPE_CONVERTER(converter, cType, dcmtkType, getter) \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js Sebastien Jodogne <s.jodogne@gmail.com> parents: 3577 diff changeset	199 \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js Sebastien Jodogne <s.jodogne@gmail.com> parents: 3577 diff changeset	200 struct converter \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js Sebastien Jodogne <s.jodogne@gmail.com> parents: 3577 diff changeset	201 { \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js Sebastien Jodogne <s.jodogne@gmail.com> parents: 3577 diff changeset	202 typedef cType CType; \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js Sebastien Jodogne <s.jodogne@gmail.com> parents: 3577 diff changeset	203 \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js Sebastien Jodogne <s.jodogne@gmail.com> parents: 3577 diff changeset	204 static bool Apply(CType& result, \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js Sebastien Jodogne <s.jodogne@gmail.com> parents: 3577 diff changeset	205 DcmElement& element, \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js Sebastien Jodogne <s.jodogne@gmail.com> parents: 3577 diff changeset	206 size_t i) \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js Sebastien Jodogne <s.jodogne@gmail.com> parents: 3577 diff changeset	207 { \
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	208 return dynamic_cast<dcmtkType&>(element).getter(result, i).good(); \
3594 0654d0838de8 disable thread support in DCMTK if wasm/asm.js Sebastien Jodogne <s.jodogne@gmail.com> parents: 3577 diff changeset	209 } \
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	210 };
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	211
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	212 DCMTK_TO_CTYPE_CONVERTER(DcmtkToSint32Converter, Sint32, DcmSignedLong, getSint32)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	213 DCMTK_TO_CTYPE_CONVERTER(DcmtkToSint16Converter, Sint16, DcmSignedShort, getSint16)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	214 DCMTK_TO_CTYPE_CONVERTER(DcmtkToUint32Converter, Uint32, DcmUnsignedLong, getUint32)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	215 DCMTK_TO_CTYPE_CONVERTER(DcmtkToUint16Converter, Uint16, DcmUnsignedShort, getUint16)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	216 DCMTK_TO_CTYPE_CONVERTER(DcmtkToFloat32Converter, Float32, DcmFloatingPointSingle, getFloat32)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	217 DCMTK_TO_CTYPE_CONVERTER(DcmtkToFloat64Converter, Float64, DcmFloatingPointDouble, getFloat64)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	218
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	219
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	220 template <typename F>
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	221 static DicomValue* ApplyDcmtkToCTypeConverter(DcmElement& element)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	222 {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	223 F f;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	224 typename F::CType value;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	225
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	226 if (element.getLength() > sizeof(typename F::CType)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	227 && (element.getLength() % sizeof(typename F::CType)) == 0)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	228 {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	229 size_t count = element.getLength() / sizeof(typename F::CType);
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	230 std::vector<std::string> strings;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	231 for (size_t i = 0; i < count; i++) {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	232 if (f.Apply(value, element, i)) {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	233 strings.push_back(boost::lexical_cast<std::string>(value));
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	234 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	235 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	236 return new DicomValue(boost::algorithm::join(strings, "\\"), false);
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	237 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	238 else if (f.Apply(value, element, 0)) {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	239 return new DicomValue(boost::lexical_cast<std::string>(value), false);
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	240 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	241 else {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	242 return new DicomValue;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	243 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	244 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	245
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	246 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	247
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	248
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	249 void FromDcmtkBridge::InitializeDictionary(bool loadPrivateDictionary)
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	250 {
2296 17e8e8e1ff3d log dcmtk version Sebastien Jodogne <s.jodogne@gmail.com> parents: 2287 diff changeset	251 LOG(INFO) << "Using DCTMK version: " << DCMTK_VERSION_NUMBER;
17e8e8e1ff3d log dcmtk version Sebastien Jodogne <s.jodogne@gmail.com> parents: 2287 diff changeset	252
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	253 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	254 DictionaryLocker locker;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	255
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	256 locker->clear();
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	257
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	258 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
2528 832217e4e872 old warnings turned into info Sebastien Jodogne <s.jodogne@gmail.com> parents: 2522 diff changeset	259 LOG(INFO) << "Loading the embedded dictionaries";
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	260 /**
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	261 * Do not load DICONDE dictionary, it breaks the other tags. The
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	262 * command "strace storescu 2>&1 \|grep dic" shows that DICONDE
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	263 * dictionary is not loaded by storescu.
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	264 **/
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	265 //LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_DICONDE);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	266
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	267 LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_DICOM);
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	268
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	269 if (loadPrivateDictionary)
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	270 {
2152 cbebc5d072b0 Use of DCMTK 3.6.1 dictionary of private tags in standalone builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 2151 diff changeset	271 LOG(INFO) << "Loading the embedded dictionary of private tags";
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	272 LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_PRIVATE);
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	273 }
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	274 else
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	275 {
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	276 LOG(INFO) << "The dictionary of private tags has not been loaded";
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	277 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	278
3302 8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	279 #else
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	280 std::vector<std::string> dictionaries;
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	281
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	282 const char* env = std::getenv(DCM_DICT_ENVIRONMENT_VARIABLE);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	283 if (env != NULL)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	284 {
3302 8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	285 // This mimics the behavior of DCMTK:
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	286 // https://support.dcmtk.org/docs/file_envvars.html
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	287 #if defined(_WIN32)
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	288 Toolbox::TokenizeString(dictionaries, std::string(env), ';');
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	289 #else
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	290 Toolbox::TokenizeString(dictionaries, std::string(env), ':');
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	291 #endif
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	292 }
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	293 else
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	294 {
3302 8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	295 boost::filesystem::path base = DCMTK_DICTIONARY_DIR;
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	296 dictionaries.push_back((base / "dicom.dic").string());
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	297 dictionaries.push_back((base / "private.dic").string());
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	298 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	299
3302 8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	300 for (size_t i = 0; i < dictionaries.size(); i++)
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	301 {
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	302 LOG(WARNING) << "Loading external DICOM dictionary: \"" << dictionaries[i] << "\"";
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	303
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	304 if (!locker->loadDictionary(dictionaries[i].c_str()))
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	305 {
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	306 throw OrthancException(ErrorCode_InexistentFile);
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	307 }
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	308 }
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH) Sebastien Jodogne <s.jodogne@gmail.com> parents: 3217 diff changeset	309
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	310 #endif
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	311 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	312
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	313 /* make sure data dictionary is loaded */
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	314 if (!dcmDataDict.isDictionaryLoaded())
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	315 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	316 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	317 "No DICOM dictionary loaded, check environment variable: " +
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	318 std::string(DCM_DICT_ENVIRONMENT_VARIABLE));
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	319 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	320
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	321 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	322 // Test the dictionary with a simple DICOM tag
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	323 DcmTag key(0x0010, 0x1030); // This is PatientWeight
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	324 if (key.getEVR() != EVR_DS)
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	325 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	326 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	327 "The DICOM dictionary has not been correctly read");
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	328 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	329 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	330 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	331
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	332
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	333 void FromDcmtkBridge::RegisterDictionaryTag(const DicomTag& tag,
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	334 ValueRepresentation vr,
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	335 const std::string& name,
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	336 unsigned int minMultiplicity,
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	337 unsigned int maxMultiplicity,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	338 const std::string& privateCreator)
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	339 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	340 if (minMultiplicity < 1)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	341 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	342 throw OrthancException(ErrorCode_ParameterOutOfRange);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	343 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	344
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	345 bool arbitrary = false;
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	346 if (maxMultiplicity == 0)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	347 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	348 maxMultiplicity = DcmVariableVM;
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	349 arbitrary = true;
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	350 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	351 else if (maxMultiplicity < minMultiplicity)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	352 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	353 throw OrthancException(ErrorCode_ParameterOutOfRange);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	354 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	355
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	356 DcmEVR evr = ToDcmtkBridge::Convert(vr);
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	357
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	358 LOG(INFO) << "Registering tag in dictionary: " << tag << " " << (DcmVR(evr).getValidVRName()) << " "
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	359 << name << " (multiplicity: " << minMultiplicity << "-"
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	360 << (arbitrary ? "n" : boost::lexical_cast<std::string>(maxMultiplicity)) << ")";
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	361
3712 2a170a8f1faf replacing std::auto_ptr by std::unique_ptr Sebastien Jodogne <s.jodogne@gmail.com> parents: 3708 diff changeset	362 std::unique_ptr<DcmDictEntry> entry;
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	363 if (privateCreator.empty())
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	364 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	365 if (tag.GetGroup() % 2 == 1)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	366 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	367 char buf[128];
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	368 sprintf(buf, "Warning: You are registering a private tag (%04x,%04x), "
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	369 "but no private creator was associated with it",
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	370 tag.GetGroup(), tag.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	371 LOG(WARNING) << buf;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	372 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	373
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	374 entry.reset(new DcmDictEntry(tag.GetGroup(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	375 tag.GetElement(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	376 evr, name.c_str(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	377 static_cast<int>(minMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	378 static_cast<int>(maxMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	379 NULL /* version */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	380 OFTrue /* doCopyString */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	381 NULL /* private creator */));
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	382 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	383 else
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	384 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	385 // "Private Data Elements have an odd Group Number that is not
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	386 // (0001,eeee), (0003,eeee), (0005,eeee), (0007,eeee), or
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	387 // (FFFF,eeee)."
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	388 if (tag.GetGroup() % 2 == 0 /* even */ \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	389 tag.GetGroup() == 0x0001 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	390 tag.GetGroup() == 0x0003 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	391 tag.GetGroup() == 0x0005 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	392 tag.GetGroup() == 0x0007 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	393 tag.GetGroup() == 0xffff)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	394 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	395 char buf[128];
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	396 sprintf(buf, "Trying to register private tag (%04x,%04x), but it must have an odd group >= 0x0009",
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	397 tag.GetGroup(), tag.GetElement());
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	398 throw OrthancException(ErrorCode_ParameterOutOfRange, std::string(buf));
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	399 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	400
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	401 entry.reset(new DcmDictEntry(tag.GetGroup(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	402 tag.GetElement(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	403 evr, name.c_str(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	404 static_cast<int>(minMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	405 static_cast<int>(maxMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	406 "private" /* version */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	407 OFTrue /* doCopyString */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	408 privateCreator.c_str()));
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	409 }
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	410
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	411 entry->setGroupRangeRestriction(DcmDictRange_Unspecified);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	412 entry->setElementRangeRestriction(DcmDictRange_Unspecified);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	413
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	414 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	415 DictionaryLocker locker;
2116 2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	416
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	417 if (locker->findEntry(name.c_str()))
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	418 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	419 throw OrthancException(ErrorCode_AlreadyExistingTag,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	420 "Cannot register two tags with the same symbolic name \"" + name + "\"");
2116 2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	421 }
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	422
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	423 locker->addEntry(entry.release());
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	424 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	425 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	426
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	427
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	428 Encoding FromDcmtkBridge::DetectEncoding(bool& hasCodeExtensions,
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	429 DcmItem& dataset,
1928 84c7eaeb5244 Configuration::GetDefaultEncoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 1927 diff changeset	430 Encoding defaultEncoding)
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	431 {
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	432 // http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_C.12.html#sect_C.12.1.1.2
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	433
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	434 OFString tmp;
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	435 if (dataset.findAndGetOFStringArray(DCM_SpecificCharacterSet, tmp).good())
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	436 {
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	437 std::vector<std::string> tokens;
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	438 Toolbox::TokenizeString(tokens, std::string(tmp.c_str()), '\\');
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	439
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	440 hasCodeExtensions = (tokens.size() > 1);
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	441
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	442 for (size_t i = 0; i < tokens.size(); i++)
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	443 {
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	444 std::string characterSet = Toolbox::StripSpaces(tokens[i]);
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	445
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	446 if (!characterSet.empty())
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	447 {
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	448 Encoding encoding;
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	449
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	450 if (GetDicomEncoding(encoding, characterSet.c_str()))
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	451 {
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	452 // The specific character set is supported by the Orthanc core
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	453 return encoding;
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	454 }
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	455 else
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	456 {
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	457 LOG(WARNING) << "Value of Specific Character Set (0008,0005) is not supported: " << characterSet
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	458 << ", fallback to ASCII (remove all special characters)";
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	459 return Encoding_Ascii;
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	460 }
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	461 }
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	462 }
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	463 }
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	464 else
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	465 {
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	466 hasCodeExtensions = false;
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	467 }
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	468
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	469 // No specific character set tag: Use the default encoding
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	470 return defaultEncoding;
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	471 }
2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	472
2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	473
2125 b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	474 void FromDcmtkBridge::ExtractDicomSummary(DicomMap& target,
b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	475 DcmItem& dataset,
b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	476 unsigned int maxStringLength,
3577 33cfcc74d1b1 argument "ignoreTagLength" to ParsedDicomFile::ExtractDicomSummary() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3448 diff changeset	477 Encoding defaultEncoding,
33cfcc74d1b1 argument "ignoreTagLength" to ParsedDicomFile::ExtractDicomSummary() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3448 diff changeset	478 const std::set<DicomTag>& ignoreTagLength)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	479 {
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	480 bool hasCodeExtensions;
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	481 Encoding encoding = DetectEncoding(hasCodeExtensions, dataset, defaultEncoding);
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	482
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	483 target.Clear();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	484 for (unsigned long i = 0; i < dataset.card(); i++)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	485 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	486 DcmElement* element = dataset.getElement(i);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	487 if (element && element->isLeaf())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	488 {
3651 46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3640 diff changeset	489 target.SetValueInternal(element->getTag().getGTag(),
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3640 diff changeset	490 element->getTag().getETag(),
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3640 diff changeset	491 ConvertLeafElement(*element, DicomToJsonFlags_Default,
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3640 diff changeset	492 maxStringLength, encoding, hasCodeExtensions, ignoreTagLength));
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	493 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	494 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	495 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	496
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	497
991 2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	498 DicomTag FromDcmtkBridge::Convert(const DcmTag& tag)
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	499 {
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	500 return DicomTag(tag.getGTag(), tag.getETag());
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	501 }
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	502
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	503
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	504 DicomTag FromDcmtkBridge::GetTag(const DcmElement& element)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	505 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	506 return DicomTag(element.getGTag(), element.getETag());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	507 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	508
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	509
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	510 DicomValue* FromDcmtkBridge::ConvertLeafElement(DcmElement& element,
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	511 DicomToJsonFlags flags,
1929 cda5b0ab4ce5 ORTHANC_MAXIMUM_TAG_LENGTH made explicit Sebastien Jodogne <s.jodogne@gmail.com> parents: 1928 diff changeset	512 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	513 Encoding encoding,
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	514 bool hasCodeExtensions,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	515 const std::set<DicomTag>& ignoreTagLength)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	516 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	517 if (!element.isLeaf())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	518 {
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	519 // This function is only applicable to leaf elements
bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	520 throw OrthancException(ErrorCode_BadParameterType);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	521 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	522
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	523 char *c = NULL;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	524 if (element.isaString() &&
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	525 element.getString(c).good())
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	526 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	527 if (c == NULL) // This case corresponds to the empty string
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	528 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	529 return new DicomValue("", false);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	530 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	531 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	532 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	533 std::string s(c);
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	534 std::string utf8 = Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions);
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	535
1929 cda5b0ab4ce5 ORTHANC_MAXIMUM_TAG_LENGTH made explicit Sebastien Jodogne <s.jodogne@gmail.com> parents: 1928 diff changeset	536 if (maxStringLength != 0 &&
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	537 utf8.size() > maxStringLength &&
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	538 ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	539 {
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	540 return new DicomValue; // Too long, create a NULL value
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	541 }
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	542 else
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	543 {
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	544 return new DicomValue(utf8, false);
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	545 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	546 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	547 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	548
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	549
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	550 if (element.getVR() == EVR_UN)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	551 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	552 // Unknown value representation: Lookup in the dictionary. This
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	553 // is notably the case for private tags registered with the
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	554 // "Dictionary" configuration option.
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	555 DictionaryLocker locker;
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	556
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	557 const DcmDictEntry* entry = locker->findEntry(element.getTag().getXTag(),
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	558 element.getTag().getPrivateCreator());
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	559 if (entry != NULL &&
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	560 entry->getVR().isaString())
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	561 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	562 Uint8* data = NULL;
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	563
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	564 // At (*), we do not try and convert to UTF-8, as nothing says
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	565 // the encoding of the private tag is the same as that of the
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	566 // remaining of the DICOM dataset. Only go for ASCII strings.
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	567
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	568 if (element.getUint8Array(data) == EC_Normal &&
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	569 Toolbox::IsAsciiString(data, element.getLength())) // (*)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	570 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	571 if (data == NULL)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	572 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	573 return new DicomValue("", false); // Empty string
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	574 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	575 else if (maxStringLength != 0 &&
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	576 element.getLength() > maxStringLength &&
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	577 ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	578 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	579 return new DicomValue; // Too long, create a NULL value
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	580 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	581 else
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	582 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	583 std::string s(reinterpret_cast<const char*>(data), element.getLength());
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	584 return new DicomValue(s, false);
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	585 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	586 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	587 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	588 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	589
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	590
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	591 try
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	592 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	593 // http://support.dcmtk.org/docs/dcvr_8h-source.html
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	594 switch (element.getVR())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	595 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	596
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	597 /**
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	598 * Deal with binary data (including PixelData).
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	599 **/
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	600
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	601 case EVR_OB: // other byte
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	602 case EVR_OF: // other float
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	603 case EVR_OW: // other word
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	604 case EVR_UN: // unknown value representation
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	605 case EVR_ox: // OB or OW depending on context
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	606 case EVR_DS: // decimal string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	607 case EVR_IS: // integer string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	608 case EVR_AS: // age string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	609 case EVR_DA: // date string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	610 case EVR_DT: // date time string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	611 case EVR_TM: // time string
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	612 case EVR_AE: // application entity title
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	613 case EVR_CS: // code string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	614 case EVR_SH: // short string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	615 case EVR_LO: // long string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	616 case EVR_ST: // short text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	617 case EVR_LT: // long text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	618 case EVR_UT: // unlimited text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	619 case EVR_PN: // person name
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	620 case EVR_UI: // unique identifier
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	621 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	622 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	623 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	624 if (!(flags & DicomToJsonFlags_ConvertBinaryToNull))
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	625 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	626 Uint8* data = NULL;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	627 if (element.getUint8Array(data) == EC_Normal)
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	628 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	629 return new DicomValue(reinterpret_cast<const char*>(data), element.getLength(), true);
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	630 }
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	631 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	632
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	633 return new DicomValue;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	634 }
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	635
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	636 /**
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	637 * Numeric types
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	638 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	639
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	640 case EVR_SL: // signed long
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	641 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	642 return ApplyDcmtkToCTypeConverter<DcmtkToSint32Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	643 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	644
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	645 case EVR_SS: // signed short
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	646 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	647 return ApplyDcmtkToCTypeConverter<DcmtkToSint16Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	648 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	649
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	650 case EVR_UL: // unsigned long
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	651 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	652 return ApplyDcmtkToCTypeConverter<DcmtkToUint32Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	653 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	654
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	655 case EVR_US: // unsigned short
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	656 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	657 return ApplyDcmtkToCTypeConverter<DcmtkToUint16Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	658 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	659
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	660 case EVR_FL: // float single-precision
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	661 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	662 return ApplyDcmtkToCTypeConverter<DcmtkToFloat32Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	663 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	664
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	665 case EVR_FD: // float double-precision
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	666 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	667 return ApplyDcmtkToCTypeConverter<DcmtkToFloat64Converter>(element);
1131 ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	668 }
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	669
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	670
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	671 /**
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	672 * Attribute tag.
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	673 **/
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	674
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	675 case EVR_AT:
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	676 {
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	677 DcmTagKey tag;
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	678 if (dynamic_cast<DcmAttributeTag&>(element).getTagVal(tag, 0).good())
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	679 {
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	680 DicomTag t(tag.getGroup(), tag.getElement());
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	681 return new DicomValue(t.Format(), false);
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	682 }
1131 ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	683 else
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	684 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	685 return new DicomValue;
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	686 }
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	687 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	688
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	689
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	690 /**
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	691 * Sequence types, should never occur at this point because of
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	692 * "element.isLeaf()".
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	693 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	694
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	695 case EVR_SQ: // sequence of items
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	696 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	697
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	698
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	699 /**
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	700 * Internal to DCMTK.
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	701 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	702
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	703 case EVR_xs: // SS or US depending on context
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	704 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	705 case EVR_na: // na="not applicable", for data which has no VR
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	706 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	707 case EVR_item: // used internally for items
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	708 case EVR_metainfo: // used internally for meta info datasets
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	709 case EVR_dataset: // used internally for datasets
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	710 case EVR_fileFormat: // used internally for DICOM files
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	711 case EVR_dicomDir: // used internally for DICOMDIR objects
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	712 case EVR_dirRecord: // used internally for DICOMDIR records
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	713 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	714 case EVR_pixelItem: // used internally for pixel items in a compressed image
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	715 case EVR_PixelData: // used internally for uncompressed pixeld data
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	716 case EVR_OverlayData: // used internally for overlay data
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	717 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	718
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	719
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	720 /**
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	721 * Default case.
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	722 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	723
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	724 default:
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	725 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	726 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	727 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	728 catch (boost::bad_lexical_cast&)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	729 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	730 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	731 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	732 catch (std::bad_cast&)
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	733 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	734 return new DicomValue;
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	735 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	736 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	737
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	738
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	739 static Json::Value& PrepareNode(Json::Value& parent,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	740 DcmElement& element,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	741 DicomToJsonFormat format)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	742 {
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	743 assert(parent.type() == Json::objectValue);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	744
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	745 DicomTag tag(FromDcmtkBridge::GetTag(element));
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	746 const std::string formattedTag = tag.Format();
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	747
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	748 if (format == DicomToJsonFormat_Short)
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	749 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	750 parent[formattedTag] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	751 return parent[formattedTag];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	752 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	753
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	754 // This code gives access to the name of the private tags
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	755 std::string tagName = FromDcmtkBridge::GetTagName(element);
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	756
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	757 switch (format)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	758 {
1860 c7d70f659190 DicomToJsonFormat_Simple -> DicomToJsonFormat_Human Sebastien Jodogne <s.jodogne@gmail.com> parents: 1854 diff changeset	759 case DicomToJsonFormat_Human:
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	760 parent[tagName] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	761 return parent[tagName];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	762
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	763 case DicomToJsonFormat_Full:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	764 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	765 parent[formattedTag] = Json::objectValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	766 Json::Value& node = parent[formattedTag];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	767
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	768 if (element.isLeaf())
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	769 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	770 node["Name"] = tagName;
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	771
2076 ec2ad6ac741e fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2074 diff changeset	772 if (element.getTag().getPrivateCreator() != NULL)
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	773 {
2076 ec2ad6ac741e fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2074 diff changeset	774 node["PrivateCreator"] = element.getTag().getPrivateCreator();
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	775 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	776
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	777 return node;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	778 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	779 else
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	780 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	781 node["Name"] = tagName;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	782 node["Type"] = "Sequence";
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	783 node["Value"] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	784 return node["Value"];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	785 }
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	786 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	787
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	788 default:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	789 throw OrthancException(ErrorCode_ParameterOutOfRange);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	790 }
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	791 }
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	792
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	793
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	794 static void LeafValueToJson(Json::Value& target,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	795 const DicomValue& value,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	796 DicomToJsonFormat format,
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	797 DicomToJsonFlags flags,
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	798 unsigned int maxStringLength)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	799 {
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	800 Json::Value* targetValue = NULL;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	801 Json::Value* targetType = NULL;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	802
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	803 switch (format)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	804 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	805 case DicomToJsonFormat_Short:
1860 c7d70f659190 DicomToJsonFormat_Simple -> DicomToJsonFormat_Human Sebastien Jodogne <s.jodogne@gmail.com> parents: 1854 diff changeset	806 case DicomToJsonFormat_Human:
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	807 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	808 assert(target.type() == Json::nullValue);
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	809 targetValue = &target;
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	810 break;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	811 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	812
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	813 case DicomToJsonFormat_Full:
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	814 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	815 assert(target.type() == Json::objectValue);
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	816 target["Value"] = Json::nullValue;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	817 target["Type"] = Json::nullValue;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	818 targetType = &target["Type"];
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	819 targetValue = &target["Value"];
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	820 break;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	821 }
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	822
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	823 default:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	824 throw OrthancException(ErrorCode_ParameterOutOfRange);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	825 }
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	826
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	827 assert(targetValue != NULL);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	828 assert(targetValue->type() == Json::nullValue);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	829 assert(targetType == NULL \|\| targetType->type() == Json::nullValue);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	830
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	831 if (value.IsNull())
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	832 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	833 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	834 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	835 *targetType = "Null";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	836 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	837 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	838 else if (value.IsBinary())
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	839 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	840 if (flags & DicomToJsonFlags_ConvertBinaryToAscii)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	841 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	842 *targetValue = Toolbox::ConvertToAscii(value.GetContent());
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	843 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	844 else
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	845 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	846 std::string s;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	847 value.FormatDataUriScheme(s);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	848 *targetValue = s;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	849 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	850
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	851 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	852 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	853 *targetType = "Binary";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	854 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	855 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	856 else if (maxStringLength == 0 \|\|
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	857 value.GetContent().size() <= maxStringLength)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	858 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	859 *targetValue = value.GetContent();
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	860
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	861 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	862 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	863 *targetType = "String";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	864 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	865 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	866 else
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	867 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	868 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	869 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	870 *targetType = "TooLong";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	871 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	872 }
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	873 }
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	874
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	875
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	876 void FromDcmtkBridge::ElementToJson(Json::Value& parent,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	877 DcmElement& element,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	878 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	879 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	880 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	881 Encoding encoding,
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	882 bool hasCodeExtensions,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	883 const std::set<DicomTag>& ignoreTagLength)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	884 {
1691 e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	885 if (parent.type() == Json::nullValue)
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	886 {
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	887 parent = Json::objectValue;
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	888 }
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	889
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	890 assert(parent.type() == Json::objectValue);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	891 Json::Value& target = PrepareNode(parent, element, format);
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	892
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	893 if (element.isLeaf())
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	894 {
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	895 // The "0" below lets "LeafValueToJson()" take care of "TooLong" values
3712 2a170a8f1faf replacing std::auto_ptr by std::unique_ptr Sebastien Jodogne <s.jodogne@gmail.com> parents: 3708 diff changeset	896 std::unique_ptr<DicomValue> v(FromDcmtkBridge::ConvertLeafElement
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	897 (element, flags, 0, encoding, hasCodeExtensions, ignoreTagLength));
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	898
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	899 if (ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	900 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	901 LeafValueToJson(target, *v, format, flags, maxStringLength);
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	902 }
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	903 else
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	904 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	905 LeafValueToJson(target, *v, format, flags, 0);
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	906 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	907 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	908 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	909 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	910 assert(target.type() == Json::nullValue);
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	911 target = Json::arrayValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	912
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	913 // "All subclasses of DcmElement except for DcmSequenceOfItems
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	914 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	915 // etc. are not." The following dynamic_cast is thus OK.
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	916 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	917
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	918 for (unsigned long i = 0; i < sequence.card(); i++)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	919 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	920 DcmItem* child = sequence.getItem(i);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	921 Json::Value& v = target.append(Json::objectValue);
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	922 DatasetToJson(v, *child, format, flags, maxStringLength, encoding, hasCodeExtensions, ignoreTagLength);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	923 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	924 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	925 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	926
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	927
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	928 void FromDcmtkBridge::DatasetToJson(Json::Value& parent,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	929 DcmItem& item,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	930 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	931 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	932 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	933 Encoding encoding,
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	934 bool hasCodeExtensions,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	935 const std::set<DicomTag>& ignoreTagLength)
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	936 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	937 assert(parent.type() == Json::objectValue);
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	938
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	939 for (unsigned long i = 0; i < item.card(); i++)
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	940 {
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	941 DcmElement* element = item.getElement(i);
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	942 if (element == NULL)
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	943 {
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	944 throw OrthancException(ErrorCode_InternalError);
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	945 }
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	946
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	947 DicomTag tag(FromDcmtkBridge::Convert(element->getTag()));
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	948
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	949 /element->getTag().isPrivate()/
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	950 if (tag.IsPrivate() &&
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	951 !(flags & DicomToJsonFlags_IncludePrivateTags))
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	952 {
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	953 continue;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	954 }
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	955
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	956 if (!(flags & DicomToJsonFlags_IncludeUnknownTags))
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	957 {
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	958 DictionaryLocker locker;
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	959 if (locker->findEntry(element->getTag(), element->getTag().getPrivateCreator()) == NULL)
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	960 {
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	961 continue;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	962 }
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	963 }
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	964
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	965 if (IsBinaryTag(element->getTag()))
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	966 {
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	967 // This is a binary tag
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	968 if ((tag == DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludePixelData)) \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	969 (tag != DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludeBinary)))
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	970 {
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	971 continue;
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	972 }
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	973 }
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	974
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	975 FromDcmtkBridge::ElementToJson(parent, *element, format, flags,
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	976 maxStringLength, encoding, hasCodeExtensions, ignoreTagLength);
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	977 }
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	978 }
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	979
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	980
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	981 void FromDcmtkBridge::ExtractDicomAsJson(Json::Value& target,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	982 DcmDataset& dataset,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	983 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	984 DicomToJsonFlags flags,
2131 bb199bccdc45 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 2129 diff changeset	985 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	986 Encoding defaultEncoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	987 const std::set<DicomTag>& ignoreTagLength)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	988 {
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	989 bool hasCodeExtensions;
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	990 Encoding encoding = DetectEncoding(hasCodeExtensions, dataset, defaultEncoding);
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	991
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	992 target = Json::objectValue;
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	993 DatasetToJson(target, dataset, format, flags, maxStringLength, encoding, hasCodeExtensions, ignoreTagLength);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	994 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	995
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	996
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	997 void FromDcmtkBridge::ExtractHeaderAsJson(Json::Value& target,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	998 DcmMetaInfo& dataset,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	999 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	1000 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	1001 unsigned int maxStringLength)
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	1002 {
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	1003 std::set<DicomTag> ignoreTagLength;
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	1004 target = Json::objectValue;
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	1005 DatasetToJson(target, dataset, format, flags, maxStringLength, Encoding_Ascii, false, ignoreTagLength);
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	1006 }
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	1007
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	1008
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1009
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1010 static std::string GetTagNameInternal(DcmTag& tag)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1011 {
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1012 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1013 // Some patches for important tags because of different DICOM
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1014 // dictionaries between DCMTK versions
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1015 DicomTag tmp(tag.getGroup(), tag.getElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1016 std::string n = tmp.GetMainTagsName();
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1017 if (n.size() != 0)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1018 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1019 return n;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1020 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1021 // End of patches
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1022 }
106 332fec038d52 patch for dcmtk dictionaries jodogne parents: 80 diff changeset	1023
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1024 #if 0
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1025 // This version explicitly calls the dictionary
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1026 const DcmDataDictionary& dict = dcmDataDict.rdlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1027 const DcmDictEntry* entry = dict.findEntry(tag, NULL);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1028
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1029 std::string s(DcmTag_ERROR_TagName);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1030 if (entry != NULL)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1031 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1032 s = std::string(entry->getTagName());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1033 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1034
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1035 dcmDataDict.unlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1036 return s;
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1037 #else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1038 const char* name = tag.getTagName();
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1039 if (name == NULL)
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1040 {
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1041 return DcmTag_ERROR_TagName;
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1042 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1043 else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1044 {
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1045 return std::string(name);
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1046 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1047 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1048 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1049
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1050
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1051 std::string FromDcmtkBridge::GetTagName(const DicomTag& t,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1052 const std::string& privateCreator)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1053 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1054 DcmTag tag(t.GetGroup(), t.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1055
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1056 if (!privateCreator.empty())
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1057 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1058 tag.setPrivateCreator(privateCreator.c_str());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1059 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1060
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1061 return GetTagNameInternal(tag);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1062 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1063
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1064
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1065 std::string FromDcmtkBridge::GetTagName(const DcmElement& element)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1066 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1067 // Copy the tag to ensure const-correctness of DcmElement. Note
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1068 // that the private creator information is also copied.
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1069 DcmTag tag(element.getTag());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1070
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1071 return GetTagNameInternal(tag);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1072 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1073
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1074
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1075
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1076 DicomTag FromDcmtkBridge::ParseTag(const char* name)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1077 {
2662 47d812308d63 serialization of DicomModification Sebastien Jodogne <s.jodogne@gmail.com> parents: 2554 diff changeset	1078 DicomTag parsed(0, 0);
47d812308d63 serialization of DicomModification Sebastien Jodogne <s.jodogne@gmail.com> parents: 2554 diff changeset	1079 if (DicomTag::ParseHexadecimal(parsed, name))
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1080 {
2662 47d812308d63 serialization of DicomModification Sebastien Jodogne <s.jodogne@gmail.com> parents: 2554 diff changeset	1081 return parsed;
1861 a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1082 }
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1083
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1084 #if 0
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1085 const DcmDataDictionary& dict = dcmDataDict.rdlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1086 const DcmDictEntry* entry = dict.findEntry(name);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1087
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1088 if (entry == NULL)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1089 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1090 dcmDataDict.unlock();
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	1091 throw OrthancException(ErrorCode_UnknownDicomTag);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1092 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1093 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1094 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1095 DcmTagKey key = entry->getKey();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1096 DicomTag tag(key.getGroup(), key.getElement());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1097 dcmDataDict.unlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1098 return tag;
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1099 }
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1100 #else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1101 DcmTag tag;
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1102 if (DcmTag::findTagFromName(name, tag).good())
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1103 {
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1104 return DicomTag(tag.getGTag(), tag.getETag());
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1105 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1106 else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1107 {
2470 45de30d4f362 log Sebastien Jodogne <s.jodogne@gmail.com> parents: 2447 diff changeset	1108 LOG(INFO) << "Unknown DICOM tag: \"" << name << "\"";
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	1109 throw OrthancException(ErrorCode_UnknownDicomTag);
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1110 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1111 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1112 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1113
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1114
1655 e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1115 bool FromDcmtkBridge::IsUnknownTag(const DicomTag& tag)
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1116 {
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1117 DcmTag tmp(tag.GetGroup(), tag.GetElement());
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1118 return tmp.isUnknownVR();
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1119 }
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1120
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1121
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1122 void FromDcmtkBridge::ToJson(Json::Value& result,
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1123 const DicomMap& values,
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1124 bool simplify)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1125 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1126 if (result.type() != Json::objectValue)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1127 {
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	1128 throw OrthancException(ErrorCode_BadParameterType);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1129 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1130
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1131 result.clear();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1132
3651 46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3640 diff changeset	1133 for (DicomMap::Content::const_iterator
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3640 diff changeset	1134 it = values.content_.begin(); it != values.content_.end(); ++it)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1135 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1136 // TODO Inject PrivateCreator if some is available in the DicomMap?
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1137 const std::string tagName = GetTagName(it->first, "");
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1138
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1139 if (simplify)
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1140 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1141 if (it->second->IsNull())
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1142 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1143 result[tagName] = Json::nullValue;
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1144 }
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1145 else
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1146 {
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1147 // TODO IsBinary
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1148 result[tagName] = it->second->GetContent();
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1149 }
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1150 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1151 else
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1152 {
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1153 Json::Value value = Json::objectValue;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1154
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1155 value["Name"] = tagName;
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1156
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1157 if (it->second->IsNull())
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1158 {
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1159 value["Type"] = "Null";
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1160 value["Value"] = Json::nullValue;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1161 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1162 else
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1163 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1164 // TODO IsBinary
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1165 value["Type"] = "String";
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1166 value["Value"] = it->second->GetContent();
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1167 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1168
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1169 result[it->first.Format()] = value;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1170 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1171 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1172 }
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1173
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1174
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1175 std::string FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType level)
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1176 {
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1177 char uid[100];
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1178
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1179 switch (level)
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1180 {
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1181 case ResourceType_Patient:
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1182 // The "PatientID" field is of type LO (Long String), 64
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1183 // Bytes Maximum. An UUID is of length 36, thus it can be used
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1184 // as a random PatientID.
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	1185 return Toolbox::GenerateUuid();
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1186
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1187 case ResourceType_Instance:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1188 return dcmGenerateUniqueIdentifier(uid, SITE_INSTANCE_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1189
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1190 case ResourceType_Series:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1191 return dcmGenerateUniqueIdentifier(uid, SITE_SERIES_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1192
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1193 case ResourceType_Study:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1194 return dcmGenerateUniqueIdentifier(uid, SITE_STUDY_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1195
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1196 default:
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1197 throw OrthancException(ErrorCode_ParameterOutOfRange);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1198 }
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1199 }
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1200
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1201 bool FromDcmtkBridge::SaveToMemoryBuffer(std::string& buffer,
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1202 DcmDataset& dataSet)
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1203 {
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1204 // Determine the transfer syntax which shall be used to write the
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1205 // information to the file. We always switch to the Little Endian
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1206 // syntax, with explicit length.
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1207
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1208 // http://support.dcmtk.org/docs/dcxfer_8h-source.html
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1209
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1210
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1211 /**
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1212 * Note that up to Orthanc 0.7.1 (inclusive), the
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1213 * "EXS_LittleEndianExplicit" was always used to save the DICOM
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1214 * dataset into memory. We now keep the original transfer syntax
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1215 * (if available).
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1216 **/
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1217 E_TransferSyntax xfer = dataSet.getOriginalXfer();
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1218 if (xfer == EXS_Unknown)
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1219 {
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1220 // No information about the original transfer syntax: This is
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1221 // most probably a DICOM dataset that was read from memory.
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1222 xfer = EXS_LittleEndianExplicit;
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1223 }
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1224
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1225 E_EncodingType encodingType = /opt_sequenceType/ EET_ExplicitLength;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1226
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1227 // Create the meta-header information
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1228 DcmFileFormat ff(&dataSet);
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1229 ff.validateMetaInfo(xfer);
1316 1c8dfedefefe Fix anonymization generating non-portable DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 1307 diff changeset	1230 ff.removeInvalidGroups();
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1231
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1232 // Create a memory buffer with the proper size
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1233 {
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1234 const uint32_t estimatedSize = ff.calcElementLength(xfer, encodingType); // (*)
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1235 buffer.resize(estimatedSize);
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1236 }
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1237
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1238 DcmOutputBufferStream ob(&buffer[0], buffer.size());
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1239
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1240 // Fill the memory buffer with the meta-header and the dataset
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1241 ff.transferInit();
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1242 OFCondition c = ff.write(ob, xfer, encodingType, NULL,
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1243 /opt_groupLength/ EGL_recalcGL,
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1244 /opt_paddingType/ EPD_withoutPadding);
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1245 ff.transferEnd();
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1246
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1247 if (c.good())
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1248 {
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1249 // The DICOM file is successfully written, truncate the target
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1250 // buffer if its size was overestimated by (*)
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1251 ob.flush();
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1252
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1253 size_t effectiveSize = static_cast<size_t>(ob.tell());
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1254 if (effectiveSize < buffer.size())
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1255 {
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1256 buffer.resize(effectiveSize);
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1257 }
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1258
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1259 return true;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1260 }
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1261 else
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1262 {
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1263 // Error
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1264 buffer.clear();
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1265 return false;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1266 }
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1267 }
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1268
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1269
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1270 ValueRepresentation FromDcmtkBridge::LookupValueRepresentation(const DicomTag& tag)
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1271 {
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1272 DcmTag t(tag.GetGroup(), tag.GetElement());
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1273 return Convert(t.getEVR());
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1274 }
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1275
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1276 ValueRepresentation FromDcmtkBridge::Convert(const DcmEVR vr)
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1277 {
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1278 switch (vr)
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1279 {
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1280 case EVR_AE:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1281 return ValueRepresentation_ApplicationEntity;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1282
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1283 case EVR_AS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1284 return ValueRepresentation_AgeString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1285
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1286 case EVR_AT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1287 return ValueRepresentation_AttributeTag;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1288
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1289 case EVR_CS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1290 return ValueRepresentation_CodeString;
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1291
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1292 case EVR_DA:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1293 return ValueRepresentation_Date;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1294
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1295 case EVR_DS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1296 return ValueRepresentation_DecimalString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1297
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1298 case EVR_DT:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1299 return ValueRepresentation_DateTime;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1300
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1301 case EVR_FL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1302 return ValueRepresentation_FloatingPointSingle;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1303
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1304 case EVR_FD:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1305 return ValueRepresentation_FloatingPointDouble;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1306
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1307 case EVR_IS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1308 return ValueRepresentation_IntegerString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1309
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1310 case EVR_LO:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1311 return ValueRepresentation_LongString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1312
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1313 case EVR_LT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1314 return ValueRepresentation_LongText;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1315
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1316 case EVR_OB:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1317 return ValueRepresentation_OtherByte;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1318
3199 9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1319 #if DCMTK_VERSION_NUMBER >= 361
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1320 case EVR_OD:
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1321 return ValueRepresentation_OtherDouble;
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1322 #endif
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1323
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1324 case EVR_OF:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1325 return ValueRepresentation_OtherFloat;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1326
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1327 #if DCMTK_VERSION_NUMBER >= 362
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1328 case EVR_OL:
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1329 return ValueRepresentation_OtherLong;
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1330 #endif
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1331
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1332 case EVR_OW:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1333 return ValueRepresentation_OtherWord;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1334
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1335 case EVR_PN:
2007 655489d9165d DicomMap::ParseDicomMetaInformation() Sebastien Jodogne <s.jodogne@gmail.com> parents: 2006 diff changeset	1336 return ValueRepresentation_PersonName;
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1337
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1338 case EVR_SH:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1339 return ValueRepresentation_ShortString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1340
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1341 case EVR_SL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1342 return ValueRepresentation_SignedLong;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1343
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1344 case EVR_SQ:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1345 return ValueRepresentation_Sequence;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1346
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1347 case EVR_SS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1348 return ValueRepresentation_SignedShort;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1349
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1350 case EVR_ST:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1351 return ValueRepresentation_ShortText;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1352
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1353 case EVR_TM:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1354 return ValueRepresentation_Time;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1355
3199 9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1356 #if DCMTK_VERSION_NUMBER >= 361
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1357 case EVR_UC:
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1358 return ValueRepresentation_UnlimitedCharacters;
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1359 #endif
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1360
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1361 case EVR_UI:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1362 return ValueRepresentation_UniqueIdentifier;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1363
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1364 case EVR_UL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1365 return ValueRepresentation_UnsignedLong;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1366
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1367 case EVR_UN:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1368 return ValueRepresentation_Unknown;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1369
3199 9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1370 #if DCMTK_VERSION_NUMBER >= 361
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1371 case EVR_UR:
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1372 return ValueRepresentation_UniversalResource;
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	1373 #endif
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1374
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1375 case EVR_US:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1376 return ValueRepresentation_UnsignedShort;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1377
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1378 case EVR_UT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1379 return ValueRepresentation_UnlimitedText;
1792 b769623c806c safety check Sebastien Jodogne <s.jodogne@gmail.com> parents: 1765 diff changeset	1380
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1381 default:
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1382 return ValueRepresentation_NotSupported;
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1383 }
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1384 }
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1385
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1386
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1387 DcmElement* FromDcmtkBridge::CreateElementForTag(const DicomTag& tag,
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1388 const std::string& privateCreator)
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1389 {
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1390 if (tag.IsPrivate() &&
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1391 privateCreator.empty())
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1392 {
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1393 // This solves issue 140 (Modifying private tags with REST API
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1394 // changes VR from LO to UN)
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1395 // https://bitbucket.org/sjodogne/orthanc/issues/140
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1396 LOG(WARNING) << "Private creator should not be empty while creating a private tag: " << tag.Format();
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1397 }
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1398
3692 fd302ec6a502 fix for ubuntu 16.04 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3691 diff changeset	1399 #if DCMTK_VERSION_NUMBER >= 362
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1400 DcmTag key(tag.GetGroup(), tag.GetElement());
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1401 if (tag.IsPrivate())
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1402 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1403 return DcmItem::newDicomElement(key, privateCreator.c_str());
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1404 }
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1405 else
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1406 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1407 return DcmItem::newDicomElement(key, NULL);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1408 }
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1409
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1410 #else
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1411 DcmTag key(tag.GetGroup(), tag.GetElement());
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1412 if (tag.IsPrivate())
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1413 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1414 // https://forum.dcmtk.org/viewtopic.php?t=4527
3708 bc25deb40302 typo Sebastien Jodogne <s.jodogne@gmail.com> parents: 3692 diff changeset	1415 LOG(WARNING) << "You are using DCMTK <= 3.6.1: All the private tags "
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1416 "are considered as having a binary value representation";
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1417 key.setPrivateCreator(privateCreator.c_str());
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1418 return new DcmOtherByteOtherWord(key);
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1419 }
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1420 else
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1421 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1422 return newDicomElement(key);
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1423 }
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1424 #endif
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1425 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1426
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1427
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1428
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1429 void FromDcmtkBridge::FillElementWithString(DcmElement& element,
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1430 const std::string& utf8Value,
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1431 bool decodeDataUriScheme,
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1432 Encoding dicomEncoding)
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1433 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1434 std::string binary;
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1435 const std::string* decoded = &utf8Value;
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1436
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1437 if (decodeDataUriScheme &&
2905 ae20fccdd867 refactoring mime types Sebastien Jodogne <s.jodogne@gmail.com> parents: 2831 diff changeset	1438 boost::starts_with(utf8Value, URI_SCHEME_PREFIX_BINARY))
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1439 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1440 std::string mime;
1981 4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1441 if (!Toolbox::DecodeDataUriScheme(mime, binary, utf8Value))
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1442 {
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1443 throw OrthancException(ErrorCode_BadFileFormat);
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1444 }
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1445
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1446 decoded = &binary;
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1447 }
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1448 else if (dicomEncoding != Encoding_Utf8)
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1449 {
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1450 binary = Toolbox::ConvertFromUtf8(utf8Value, dicomEncoding);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1451 decoded = &binary;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1452 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1453
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1454 if (IsBinaryTag(element.getTag()))
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1455 {
3199 9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1456 bool ok;
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1457
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1458 switch (element.getTag().getEVR())
3199 9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1459 {
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1460 case EVR_OW:
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1461 if (decoded->size() % sizeof(Uint16) != 0)
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1462 {
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1463 LOG(ERROR) << "A tag with OW VR must have an even number of bytes";
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1464 ok = false;
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1465 }
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1466 else
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1467 {
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1468 ok = element.putUint16Array((const Uint16*) decoded->c_str(), decoded->size() / sizeof(Uint16)).good();
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1469 }
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1470
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1471 break;
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1472
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1473 default:
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1474 ok = element.putUint8Array((const Uint8*) decoded->c_str(), decoded->size()).good();
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1475 break;
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1476 }
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1477
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1478 if (ok)
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1479 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1480 return;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1481 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1482 else
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1483 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1484 throw OrthancException(ErrorCode_InternalError);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1485 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1486 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1487
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1488 bool ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1489
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1490 try
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1491 {
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1492 switch (element.getTag().getEVR())
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1493 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1494 // http://support.dcmtk.org/docs/dcvr_8h-source.html
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1495
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1496 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1497 * TODO.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1498 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1499
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1500 case EVR_OB: // other byte
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1501 case EVR_OW: // other word
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1502 case EVR_AT: // attribute tag
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1503 throw OrthancException(ErrorCode_NotImplemented);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1504
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1505 case EVR_UN: // unknown value representation
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1506 throw OrthancException(ErrorCode_ParameterOutOfRange);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1507
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1508
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1509 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1510 * String types.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1511 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1512
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1513 case EVR_DS: // decimal string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1514 case EVR_IS: // integer string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1515 case EVR_AS: // age string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1516 case EVR_DA: // date string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1517 case EVR_DT: // date time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1518 case EVR_TM: // time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1519 case EVR_AE: // application entity title
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1520 case EVR_CS: // code string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1521 case EVR_SH: // short string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1522 case EVR_LO: // long string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1523 case EVR_ST: // short text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1524 case EVR_LT: // long text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1525 case EVR_UT: // unlimited text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1526 case EVR_PN: // person name
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1527 case EVR_UI: // unique identifier
3209 f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3199 diff changeset	1528 #if DCMTK_VERSION_NUMBER >= 361
3199 9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1529 case EVR_UC: // unlimited characters
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	1530 case EVR_UR: // URI/URL
3209 f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3199 diff changeset	1531 #endif
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1532 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1533 ok = element.putString(decoded->c_str()).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1534 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1535 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1536
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1537
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1538 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1539 * Numerical types
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1540 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1541
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1542 case EVR_SL: // signed long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1543 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1544 ok = element.putSint32(boost::lexical_cast<Sint32>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1545 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1546 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1547
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1548 case EVR_SS: // signed short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1549 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1550 ok = element.putSint16(boost::lexical_cast<Sint16>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1551 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1552 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1553
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1554 case EVR_UL: // unsigned long
3692 fd302ec6a502 fix for ubuntu 16.04 Sebastien Jodogne <s.jodogne@gmail.com> parents: 3691 diff changeset	1555 #if DCMTK_VERSION_NUMBER >= 362
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1556 case EVR_OL: // other long (requires byte-swapping)
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1557 #endif
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1558 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1559 ok = element.putUint32(boost::lexical_cast<Uint32>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1560 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1561 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1562
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1563 case EVR_US: // unsigned short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1564 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1565 ok = element.putUint16(boost::lexical_cast<Uint16>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1566 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1567 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1568
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1569 case EVR_FL: // float single-precision
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1570 case EVR_OF: // other float (requires byte swapping)
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1571 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1572 ok = element.putFloat32(boost::lexical_cast<float>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1573 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1574 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1575
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1576 case EVR_FD: // float double-precision
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1577 #if DCMTK_VERSION_NUMBER >= 361
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1578 case EVR_OD: // other double (requires byte-swapping)
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1579 #endif
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1580 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1581 ok = element.putFloat64(boost::lexical_cast<double>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1582 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1583 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1584
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1585
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1586 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1587 * Sequence types, should never occur at this point.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1588 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1589
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1590 case EVR_SQ: // sequence of items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1591 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1592 ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1593 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1594 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1595
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1596
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1597 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1598 * Internal to DCMTK.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1599 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1600
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1601 case EVR_ox: // OB or OW depending on context
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1602 case EVR_xs: // SS or US depending on context
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1603 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1604 case EVR_na: // na="not applicable", for data which has no VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1605 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1606 case EVR_item: // used internally for items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1607 case EVR_metainfo: // used internally for meta info datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1608 case EVR_dataset: // used internally for datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1609 case EVR_fileFormat: // used internally for DICOM files
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1610 case EVR_dicomDir: // used internally for DICOMDIR objects
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1611 case EVR_dirRecord: // used internally for DICOMDIR records
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1612 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1613 case EVR_pixelItem: // used internally for pixel items in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1614 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1615 case EVR_PixelData: // used internally for uncompressed pixeld data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1616 case EVR_OverlayData: // used internally for overlay data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1617 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1618 default:
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1619 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1620 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1621 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1622 catch (boost::bad_lexical_cast&)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1623 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1624 ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1625 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1626
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1627 if (!ok)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1628 {
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1629 DicomTag tag(element.getTag().getGroup(), element.getTag().getElement());
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1630 throw OrthancException(ErrorCode_BadFileFormat,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1631 "While creating a DICOM instance, tag (" + tag.Format() +
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1632 ") has out-of-range value: \"" + (*decoded) + "\"");
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1633 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1634 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1635
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1636
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1637 DcmElement* FromDcmtkBridge::FromJson(const DicomTag& tag,
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1638 const Json::Value& value,
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1639 bool decodeDataUriScheme,
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1640 Encoding dicomEncoding,
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1641 const std::string& privateCreator)
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1642 {
3712 2a170a8f1faf replacing std::auto_ptr by std::unique_ptr Sebastien Jodogne <s.jodogne@gmail.com> parents: 3708 diff changeset	1643 std::unique_ptr<DcmElement> element;
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1644
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1645 switch (value.type())
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1646 {
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1647 case Json::stringValue:
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1648 element.reset(CreateElementForTag(tag, privateCreator));
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1649 FillElementWithString(*element, value.asString(), decodeDataUriScheme, dicomEncoding);
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1650 break;
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1651
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1652 case Json::nullValue:
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1653 element.reset(CreateElementForTag(tag, privateCreator));
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1654 FillElementWithString(*element, "", decodeDataUriScheme, dicomEncoding);
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1655 break;
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1656
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1657 case Json::arrayValue:
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1658 {
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1659 DcmTag key(tag.GetGroup(), tag.GetElement());
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1660 if (key.getEVR() != EVR_SQ)
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1661 {
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1662 throw OrthancException(ErrorCode_BadParameterType);
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1663 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1664
2287 9f3414878c02 Fix Debian #865606 (orthanc FTBFS with libdcmtk-dev 3.6.1~20170228-2) Sebastien Jodogne <s.jodogne@gmail.com> parents: 2275 diff changeset	1665 DcmSequenceOfItems* sequence = new DcmSequenceOfItems(key);
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1666 element.reset(sequence);
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1667
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1668 for (Json::Value::ArrayIndex i = 0; i < value.size(); i++)
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1669 {
3712 2a170a8f1faf replacing std::auto_ptr by std::unique_ptr Sebastien Jodogne <s.jodogne@gmail.com> parents: 3708 diff changeset	1670 std::unique_ptr<DcmItem> item(new DcmItem);
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1671
2830 ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1672 switch (value[i].type())
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1673 {
2830 ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1674 case Json::objectValue:
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1675 {
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1676 Json::Value::Members members = value[i].getMemberNames();
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1677 for (Json::Value::ArrayIndex j = 0; j < members.size(); j++)
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1678 {
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1679 item->insert(FromJson(ParseTag(members[j]), value[i][members[j]], decodeDataUriScheme, dicomEncoding, privateCreator));
2830 ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1680 }
2831 b51233f03e7e missing break Sebastien Jodogne <s.jodogne@gmail.com> parents: 2830 diff changeset	1681 break;
2830 ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1682 }
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1683
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1684 case Json::arrayValue:
2831 b51233f03e7e missing break Sebastien Jodogne <s.jodogne@gmail.com> parents: 2830 diff changeset	1685 {
2830 ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1686 // Lua cannot disambiguate between an empty dictionary
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1687 // and an empty array
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1688 if (value[i].size() != 0)
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1689 {
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1690 throw OrthancException(ErrorCode_BadParameterType);
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1691 }
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1692 break;
2831 b51233f03e7e missing break Sebastien Jodogne <s.jodogne@gmail.com> parents: 2830 diff changeset	1693 }
2830 ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1694
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1695 default:
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1696 throw OrthancException(ErrorCode_BadParameterType);
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1697 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1698
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1699 sequence->append(item.release());
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1700 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1701
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1702 break;
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1703 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1704
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1705 default:
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1706 throw OrthancException(ErrorCode_BadParameterType);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1707 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1708
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1709 return element.release();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1710 }
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	1711
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	1712
1924 6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1713 DcmPixelSequence* FromDcmtkBridge::GetPixelSequence(DcmDataset& dataset)
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1714 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1715 DcmElement *element = NULL;
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	1716 if (!dataset.findAndGetElement(DCM_PixelData, element).good())
1924 6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1717 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1718 throw OrthancException(ErrorCode_BadFileFormat);
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1719 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1720
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1721 DcmPixelData& pixelData = dynamic_cast<DcmPixelData&>(*element);
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1722 DcmPixelSequence* pixelSequence = NULL;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1723 if (!pixelData.getEncapsulatedRepresentation
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1724 (dataset.getOriginalXfer(), NULL, pixelSequence).good())
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1725 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1726 return NULL;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1727 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1728 else
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1729 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1730 return pixelSequence;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1731 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1732 }
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1733
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1734
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1735 Encoding FromDcmtkBridge::ExtractEncoding(const Json::Value& json,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1736 Encoding defaultEncoding)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1737 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1738 if (json.type() != Json::objectValue)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1739 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1740 throw OrthancException(ErrorCode_BadParameterType);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1741 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1742
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1743 Encoding encoding = defaultEncoding;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1744
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1745 const Json::Value::Members tags = json.getMemberNames();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1746
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1747 // Look for SpecificCharacterSet (0008,0005) in the JSON file
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1748 for (size_t i = 0; i < tags.size(); i++)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1749 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1750 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1751 if (tag == DICOM_TAG_SPECIFIC_CHARACTER_SET)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1752 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1753 const Json::Value& value = json[tags[i]];
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1754 if (value.type() != Json::stringValue \|\|
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1755 (value.asString().length() != 0 &&
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1756 !GetDicomEncoding(encoding, value.asCString())))
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1757 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1758 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1759 "Unknown encoding while creating DICOM from JSON: " +
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1760 value.toStyledString());
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1761 }
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1762
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1763 if (value.asString().length() == 0)
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1764 {
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1765 return defaultEncoding;
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1766 }
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1767 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1768 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1769
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1770 return encoding;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1771 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1772
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1773
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1774 static void SetString(DcmDataset& target,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1775 const DcmTag& tag,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1776 const std::string& value)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1777 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1778 if (!target.putAndInsertString(tag, value.c_str()).good())
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1779 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1780 throw OrthancException(ErrorCode_InternalError);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1781 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1782 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1783
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1784
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1785 DcmDataset* FromDcmtkBridge::FromJson(const Json::Value& json, // Encoded using UTF-8
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1786 bool generateIdentifiers,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1787 bool decodeDataUriScheme,
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1788 Encoding defaultEncoding,
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	1789 const std::string& privateCreator)
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1790 {
3712 2a170a8f1faf replacing std::auto_ptr by std::unique_ptr Sebastien Jodogne <s.jodogne@gmail.com> parents: 3708 diff changeset	1791 std::unique_ptr<DcmDataset> result(new DcmDataset);
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1792 Encoding encoding = ExtractEncoding(json, defaultEncoding);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1793
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1794 SetString(*result, DCM_SpecificCharacterSet, GetDicomSpecificCharacterSet(encoding));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1795
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1796 const Json::Value::Members tags = json.getMemberNames();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1797
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1798 bool hasPatientId = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1799 bool hasStudyInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1800 bool hasSeriesInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1801 bool hasSopInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1802
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1803 for (size_t i = 0; i < tags.size(); i++)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1804 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1805 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1806 const Json::Value& value = json[tags[i]];
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1807
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1808 if (tag == DICOM_TAG_PATIENT_ID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1809 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1810 hasPatientId = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1811 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1812 else if (tag == DICOM_TAG_STUDY_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1813 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1814 hasStudyInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1815 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1816 else if (tag == DICOM_TAG_SERIES_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1817 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1818 hasSeriesInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1819 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1820 else if (tag == DICOM_TAG_SOP_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1821 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1822 hasSopInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1823 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1824
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1825 if (tag != DICOM_TAG_SPECIFIC_CHARACTER_SET)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1826 {
3712 2a170a8f1faf replacing std::auto_ptr by std::unique_ptr Sebastien Jodogne <s.jodogne@gmail.com> parents: 3708 diff changeset	1827 std::unique_ptr<DcmElement> element(FromDcmtkBridge::FromJson(tag, value, decodeDataUriScheme, encoding, privateCreator));
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1828 const DcmTagKey& tag = element->getTag();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1829
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1830 result->findAndDeleteElement(tag);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1831
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1832 DcmElement* tmp = element.release();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1833 if (!result->insert(tmp, false, false).good())
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1834 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1835 delete tmp;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1836 throw OrthancException(ErrorCode_InternalError);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1837 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1838 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1839 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1840
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1841 if (!hasPatientId &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1842 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1843 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1844 SetString(*result, DCM_PatientID, GenerateUniqueIdentifier(ResourceType_Patient));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1845 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1846
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1847 if (!hasStudyInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1848 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1849 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1850 SetString(*result, DCM_StudyInstanceUID, GenerateUniqueIdentifier(ResourceType_Study));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1851 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1852
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1853 if (!hasSeriesInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1854 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1855 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1856 SetString(*result, DCM_SeriesInstanceUID, GenerateUniqueIdentifier(ResourceType_Series));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1857 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1858
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1859 if (!hasSopInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1860 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1861 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1862 SetString(*result, DCM_SOPInstanceUID, GenerateUniqueIdentifier(ResourceType_Instance));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1863 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1864
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1865 return result.release();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1866 }
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1867
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1868
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1869 DcmFileFormat* FromDcmtkBridge::LoadFromMemoryBuffer(const void* buffer,
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1870 size_t size)
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1871 {
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1872 DcmInputBufferStream is;
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1873 if (size > 0)
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1874 {
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1875 is.setBuffer(buffer, size);
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1876 }
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1877 is.setEos();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1878
3712 2a170a8f1faf replacing std::auto_ptr by std::unique_ptr Sebastien Jodogne <s.jodogne@gmail.com> parents: 3708 diff changeset	1879 std::unique_ptr<DcmFileFormat> result(new DcmFileFormat);
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1880
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1881 result->transferInit();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1882 if (!result->read(is).good())
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1883 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1884 throw OrthancException(ErrorCode_BadFileFormat,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1885 "Cannot parse an invalid DICOM file (size: " +
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1886 boost::lexical_cast<std::string>(size) + " bytes)");
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1887 }
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1888
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1889 result->loadAllDataIntoMemory();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1890 result->transferEnd();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1891
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1892 return result.release();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1893 }
1998 9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1894
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1895
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1896 void FromDcmtkBridge::FromJson(DicomMap& target,
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1897 const Json::Value& source)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1898 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1899 if (source.type() != Json::objectValue)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1900 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1901 throw OrthancException(ErrorCode_BadFileFormat);
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1902 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1903
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1904 target.Clear();
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1905
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1906 Json::Value::Members members = source.getMemberNames();
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1907
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1908 for (size_t i = 0; i < members.size(); i++)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1909 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1910 const Json::Value& value = source[members[i]];
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1911
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1912 if (value.type() != Json::stringValue)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1913 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1914 throw OrthancException(ErrorCode_BadFileFormat);
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1915 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1916
2007 655489d9165d DicomMap::ParseDicomMetaInformation() Sebastien Jodogne <s.jodogne@gmail.com> parents: 2006 diff changeset	1917 target.SetValue(ParseTag(members[i]), value.asString(), false);
1998 9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1918 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1919 }
2207 6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1920
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1921
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1922 void FromDcmtkBridge::ChangeStringEncoding(DcmItem& dataset,
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1923 Encoding source,
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	1924 bool hasSourceCodeExtensions,
2207 6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1925 Encoding target)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1926 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1927 // Recursive exploration of a dataset to change the encoding of
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1928 // each string-like element
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1929
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1930 if (source == target)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1931 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1932 return;
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1933 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1934
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1935 for (unsigned long i = 0; i < dataset.card(); i++)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1936 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1937 DcmElement* element = dataset.getElement(i);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1938 if (element)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1939 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1940 if (element->isLeaf())
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1941 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1942 char *c = NULL;
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1943 if (element->isaString() &&
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1944 element->getString(c).good() &&
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1945 c != NULL)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1946 {
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	1947 std::string a = Toolbox::ConvertToUtf8(c, source, hasSourceCodeExtensions);
2207 6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1948 std::string b = Toolbox::ConvertFromUtf8(a, target);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1949 element->putString(b.c_str());
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1950 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1951 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1952 else
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1953 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1954 // "All subclasses of DcmElement except for DcmSequenceOfItems
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1955 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1956 // etc. are not." The following dynamic_cast is thus OK.
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1957 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(*element);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1958
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1959 for (unsigned long j = 0; j < sequence.card(); j++)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1960 {
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	1961 ChangeStringEncoding(*sequence.getItem(j), source, hasSourceCodeExtensions, target);
2207 6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1962 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1963 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1964 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1965 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1966 }
2209 e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1967
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1968
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1969 bool FromDcmtkBridge::LookupTransferSyntax(std::string& result,
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1970 DcmFileFormat& dicom)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1971 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1972 const char* value = NULL;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1973
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1974 if (dicom.getMetaInfo() != NULL &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1975 dicom.getMetaInfo()->findAndGetString(DCM_TransferSyntaxUID, value).good() &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1976 value != NULL)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1977 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1978 result.assign(value);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1979 return true;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1980 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1981 else
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1982 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1983 return false;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1984 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1985 }
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1986
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1987
2232 3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi Sebastien Jodogne <s.jodogne@gmail.com> parents: 2218 diff changeset	1988 #if ORTHANC_ENABLE_LUA == 1
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1989 void FromDcmtkBridge::ExecuteToDicom(DicomMap& target,
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1990 LuaFunctionCall& call)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1991 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1992 Json::Value output;
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1993 call.ExecuteToJson(output, true /* keep strings */);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1994
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1995 target.Clear();
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1996
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1997 if (output.type() == Json::arrayValue &&
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1998 output.size() == 0)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	1999 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2000 // This case happens for empty tables
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2001 return;
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2002 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2003
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2004 if (output.type() != Json::objectValue)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2005 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	2006 throw OrthancException(ErrorCode_LuaBadOutput,
3156 0c2b719c3796 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 3117 diff changeset	2007 "Lua: The script must return a table");
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2008 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2009
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2010 Json::Value::Members members = output.getMemberNames();
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2011
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2012 for (size_t i = 0; i < members.size(); i++)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2013 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2014 if (output[members[i]].type() != Json::stringValue)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2015 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	2016 throw OrthancException(ErrorCode_LuaBadOutput,
3156 0c2b719c3796 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 3117 diff changeset	2017 "Lua: The script must return a table "
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	2018 "mapping names of DICOM tags to strings");
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2019 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2020
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2021 DicomTag tag(ParseTag(members[i]));
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2022 target.SetValue(tag, output[members[i]].asString(), false);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2023 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2024 }
2232 3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi Sebastien Jodogne <s.jodogne@gmail.com> parents: 2218 diff changeset	2025 #endif
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2026
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2027
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2028 void FromDcmtkBridge::ExtractDicomSummary(DicomMap& target,
3577 33cfcc74d1b1 argument "ignoreTagLength" to ParsedDicomFile::ExtractDicomSummary() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3448 diff changeset	2029 DcmItem& dataset,
33cfcc74d1b1 argument "ignoreTagLength" to ParsedDicomFile::ExtractDicomSummary() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3448 diff changeset	2030 const std::set<DicomTag>& ignoreTagLength)
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2031 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2032 ExtractDicomSummary(target, dataset,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2033 ORTHANC_MAXIMUM_TAG_LENGTH,
3577 33cfcc74d1b1 argument "ignoreTagLength" to ParsedDicomFile::ExtractDicomSummary() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3448 diff changeset	2034 GetDefaultDicomEncoding(), ignoreTagLength);
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2035 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2036
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2037
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2038 void FromDcmtkBridge::ExtractDicomAsJson(Json::Value& target,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2039 DcmDataset& dataset,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2040 const std::set<DicomTag>& ignoreTagLength)
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2041 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2042 ExtractDicomAsJson(target, dataset,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2043 DicomToJsonFormat_Full,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2044 DicomToJsonFlags_Default,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2045 ORTHANC_MAXIMUM_TAG_LENGTH,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2046 GetDefaultDicomEncoding(),
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2047 ignoreTagLength);
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2048 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2049
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2050
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2051 void FromDcmtkBridge::InitializeCodecs()
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2052 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2053 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
2528 832217e4e872 old warnings turned into info Sebastien Jodogne <s.jodogne@gmail.com> parents: 2522 diff changeset	2054 LOG(INFO) << "Registering JPEG Lossless codecs in DCMTK";
3727 090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2055 DJLSDecoderRegistration::registerCodecs();
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2056 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2057 DJLSEncoderRegistration::registerCodecs();
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2058 # endif
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2059 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2060
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2061 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
2528 832217e4e872 old warnings turned into info Sebastien Jodogne <s.jodogne@gmail.com> parents: 2522 diff changeset	2062 LOG(INFO) << "Registering JPEG codecs in DCMTK";
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2063 DJDecoderRegistration::registerCodecs();
3727 090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2064 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2065 DJEncoderRegistration::registerCodecs();
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2066 # endif
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2067 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2068 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2069
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2070
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2071 void FromDcmtkBridge::FinalizeCodecs()
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2072 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2073 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2074 // Unregister JPEG-LS codecs
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2075 DJLSDecoderRegistration::cleanup();
3727 090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2076 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2077 DJLSEncoderRegistration::cleanup();
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2078 # endif
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2079 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2080
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2081 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2082 // Unregister JPEG codecs
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2083 DJDecoderRegistration::cleanup();
3727 090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2084 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
3743 33c19a6643e1 creating IDicomTranscoder abstraction Sebastien Jodogne <s.jodogne@gmail.com> parents: 3730 diff changeset	2085 DJEncoderRegistration::cleanup();
3727 090022f1b5e1 auto-generation of primitives to handle transfer syntaxes Sebastien Jodogne <s.jodogne@gmail.com> parents: 3712 diff changeset	2086 # endif
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2087 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2088 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2089
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2090
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2091
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2092 // Forward declaration
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2093 static void ApplyVisitorToElement(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2094 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2095 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2096 const std::vector<size_t>& parentIndexes,
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2097 Encoding encoding,
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2098 bool hasCodeExtensions);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2099
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2100 static void ApplyVisitorToDataset(DcmItem& dataset,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2101 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2102 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2103 const std::vector<size_t>& parentIndexes,
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2104 Encoding encoding,
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2105 bool hasCodeExtensions)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2106 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2107 assert(parentTags.size() == parentIndexes.size());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2108
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2109 for (unsigned long i = 0; i < dataset.card(); i++)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2110 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2111 DcmElement* element = dataset.getElement(i);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2112 if (element == NULL)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2113 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2114 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2115 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2116 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2117 {
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2118 ApplyVisitorToElement(*element, visitor, parentTags, parentIndexes, encoding, hasCodeExtensions);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2119 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2120 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2121 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2122
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2123
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2124 static void ApplyVisitorToLeaf(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2125 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2126 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2127 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2128 const DicomTag& tag,
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2129 Encoding encoding,
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2130 bool hasCodeExtensions)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2131 {
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2132 // TODO - Merge this function, that is more recent, with ConvertLeafElement()
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2133
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2134 assert(element.isLeaf());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2135
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2136 DcmEVR evr = element.getTag().getEVR();
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2137
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2138
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2139 /**
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2140 * Fix the EVR for types internal to DCMTK
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2141 **/
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2142
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2143 if (evr == EVR_ox) // OB or OW depending on context
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2144 {
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2145 evr = EVR_OB;
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2146 }
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2147
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2148 if (evr == EVR_UNKNOWN \|\| // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2149 evr == EVR_UNKNOWN2B) // used internally for elements with unknown VR with 2-byte length field in explicit VR
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2150 {
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2151 evr = EVR_UN;
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2152 }
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2153
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2154 const ValueRepresentation vr = FromDcmtkBridge::Convert(evr);
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2155
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2156
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2157 /**
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2158 * Deal with binary data (including PixelData).
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2159 **/
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2160
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2161 if (evr == EVR_OB \|\| // other byte
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2162 evr == EVR_OW \|\| // other word
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2163 evr == EVR_UN) // unknown value representation
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2164 {
3199 9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	2165 Uint16* data16 = NULL;
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2166 Uint8* data = NULL;
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2167
3199 9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	2168 if (evr == EVR_OW &&
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	2169 element.getUint16Array(data16) == EC_Normal)
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	2170 {
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	2171 visitor.VisitBinary(parentTags, parentIndexes, tag, vr, data16, element.getLength());
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	2172 }
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	2173 else if (evr != EVR_OW &&
9316f341e40f unit testing json for dicomweb Sebastien Jodogne <s.jodogne@gmail.com> parents: 3198 diff changeset	2174 element.getUint8Array(data) == EC_Normal)
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2175 {
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2176 visitor.VisitBinary(parentTags, parentIndexes, tag, vr, data, element.getLength());
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2177 }
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2178 else
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2179 {
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2180 visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr);
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2181 }
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2182
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2183 return; // We're done
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2184 }
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2185
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2186
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2187 /**
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2188 * Deal with plain strings (and convert them to UTF-8)
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2189 **/
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2190
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2191 char *c = NULL;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2192 if (element.isaString() &&
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2193 element.getString(c).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2194 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2195 std::string utf8;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2196
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2197 if (c != NULL) // This case corresponds to the empty string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2198 {
3448 b3bdd6dc10f2 don't change encoding of SpecificCharacterSet Sebastien Jodogne <s.jodogne@gmail.com> parents: 3302 diff changeset	2199 if (element.getTag() == DCM_SpecificCharacterSet)
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet Sebastien Jodogne <s.jodogne@gmail.com> parents: 3302 diff changeset	2200 {
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet Sebastien Jodogne <s.jodogne@gmail.com> parents: 3302 diff changeset	2201 utf8.assign(c);
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet Sebastien Jodogne <s.jodogne@gmail.com> parents: 3302 diff changeset	2202 }
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet Sebastien Jodogne <s.jodogne@gmail.com> parents: 3302 diff changeset	2203 else
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet Sebastien Jodogne <s.jodogne@gmail.com> parents: 3302 diff changeset	2204 {
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet Sebastien Jodogne <s.jodogne@gmail.com> parents: 3302 diff changeset	2205 std::string s(c);
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet Sebastien Jodogne <s.jodogne@gmail.com> parents: 3302 diff changeset	2206 utf8 = Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions);
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet Sebastien Jodogne <s.jodogne@gmail.com> parents: 3302 diff changeset	2207 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2208 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2209
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2210 std::string newValue;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2211 ITagVisitor::Action action = visitor.VisitString
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2212 (newValue, parentTags, parentIndexes, tag, vr, utf8);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2213
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2214 switch (action)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2215 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2216 case ITagVisitor::Action_None:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2217 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2218
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2219 case ITagVisitor::Action_Replace:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2220 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2221 std::string s = Toolbox::ConvertFromUtf8(newValue, encoding);
2522 ce2dfba9417c fix build with dcmtk 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 2513 diff changeset	2222 if (element.putString(s.c_str()) != EC_Normal)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2223 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	2224 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	2225 "Cannot replace value of tag: " + tag.Format());
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2226 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2227
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2228 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2229 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2230
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2231 default:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2232 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2233 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2234
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2235 return; // We're done
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2236 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2237
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2238
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2239 try
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2240 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2241 // http://support.dcmtk.org/docs/dcvr_8h-source.html
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2242 switch (evr)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2243 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2244
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2245 /**
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2246 * Plain string values.
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2247 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2248
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2249 case EVR_DS: // decimal string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2250 case EVR_IS: // integer string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2251 case EVR_AS: // age string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2252 case EVR_DA: // date string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2253 case EVR_DT: // date time string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2254 case EVR_TM: // time string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2255 case EVR_AE: // application entity title
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2256 case EVR_CS: // code string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2257 case EVR_SH: // short string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2258 case EVR_LO: // long string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2259 case EVR_ST: // short text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2260 case EVR_LT: // long text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2261 case EVR_UT: // unlimited text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2262 case EVR_PN: // person name
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2263 case EVR_UI: // unique identifier
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2264 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2265 Uint8* data = NULL;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2266
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2267 if (element.getUint8Array(data) == EC_Normal)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2268 {
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2269 const Uint32 length = element.getLength();
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2270 Uint32 l = 0;
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2271 while (l < length &&
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2272 data[l] != 0)
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2273 {
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2274 l++;
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2275 }
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2276
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2277 if (l == length)
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2278 {
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2279 // Not a null-terminated plain string
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2280 visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr);
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2281 }
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2282 else
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2283 {
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2284 std::string ignored;
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2285 std::string s(reinterpret_cast<const char*>(data), l);
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2286 ITagVisitor::Action action = visitor.VisitString
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2287 (ignored, parentTags, parentIndexes, tag, vr,
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2288 Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions));
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2289
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2290 if (action != ITagVisitor::Action_None)
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2291 {
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2292 LOG(WARNING) << "Cannot replace this string tag: "
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2293 << FromDcmtkBridge::GetTagName(element)
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2294 << " (" << tag.Format() << ")";
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2295 }
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2296 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2297 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2298 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2299 {
3195 880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2300 visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2301 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2302
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2303 return;
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2304 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2305
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2306 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2307 * Numeric types
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2308 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2309
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2310 case EVR_SL: // signed long
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2311 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2312 DcmSignedLong& content = dynamic_cast<DcmSignedLong&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2313
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2314 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2315 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2316
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2317 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2318 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2319 Sint32 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2320 if (content.getSint32(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2321 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2322 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2323 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2324 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2325
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2326 visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2327 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2328 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2329
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2330 case EVR_SS: // signed short
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2331 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2332 DcmSignedShort& content = dynamic_cast<DcmSignedShort&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2333
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2334 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2335 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2336
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2337 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2338 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2339 Sint16 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2340 if (content.getSint16(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2341 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2342 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2343 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2344 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2345
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2346 visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2347 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2348 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2349
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2350 case EVR_UL: // unsigned long
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	2351 #if DCMTK_VERSION_NUMBER >= 362
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	2352 case EVR_OL:
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	2353 #endif
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2354 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2355 DcmUnsignedLong& content = dynamic_cast<DcmUnsignedLong&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2356
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2357 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2358 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2359
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2360 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2361 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2362 Uint32 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2363 if (content.getUint32(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2364 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2365 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2366 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2367 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2368
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2369 visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2370 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2371 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2372
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2373 case EVR_US: // unsigned short
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2374 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2375 DcmUnsignedShort& content = dynamic_cast<DcmUnsignedShort&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2376
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2377 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2378 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2379
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2380 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2381 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2382 Uint16 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2383 if (content.getUint16(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2384 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2385 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2386 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2387 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2388
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2389 visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2390 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2391 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2392
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2393 case EVR_FL: // float single-precision
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	2394 case EVR_OF:
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2395 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2396 DcmFloatingPointSingle& content = dynamic_cast<DcmFloatingPointSingle&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2397
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2398 std::vector<double> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2399 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2400
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2401 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2402 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2403 Float32 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2404 if (content.getFloat32(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2405 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2406 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2407 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2408 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2409
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2410 visitor.VisitDoubles(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2411 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2412 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2413
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2414 case EVR_FD: // float double-precision
3691 4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	2415 #if DCMTK_VERSION_NUMBER >= 361
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	2416 case EVR_OD:
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT Sebastien Jodogne <s.jodogne@gmail.com> parents: 3651 diff changeset	2417 #endif
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2418 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2419 DcmFloatingPointDouble& content = dynamic_cast<DcmFloatingPointDouble&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2420
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2421 std::vector<double> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2422 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2423
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2424 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2425 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2426 Float64 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2427 if (content.getFloat64(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2428 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2429 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2430 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2431 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2432
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2433 visitor.VisitDoubles(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2434 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2435 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2436
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2437
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2438 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2439 * Attribute tag.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2440 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2441
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2442 case EVR_AT:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2443 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2444 DcmAttributeTag& content = dynamic_cast<DcmAttributeTag&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2445
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2446 std::vector<DicomTag> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2447 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2448
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2449 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2450 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2451 DcmTagKey f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2452 if (content.getTagVal(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2453 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2454 DicomTag t(f.getGroup(), f.getElement());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2455 values.push_back(t);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2456 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2457 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2458
3195 880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2459 assert(vr == ValueRepresentation_AttributeTag);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2460 visitor.VisitAttributes(parentTags, parentIndexes, tag, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2461 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2462 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2463
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2464
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2465 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2466 * Sequence types, should never occur at this point because of
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2467 * "element.isLeaf()".
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2468 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2469
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2470 case EVR_SQ: // sequence of items
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2471 {
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2472 return;
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2473 }
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2474
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2475
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2476 /**
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2477 * Internal to DCMTK.
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2478 **/
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2479
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2480 case EVR_xs: // SS or US depending on context
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2481 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2482 case EVR_na: // na="not applicable", for data which has no VR
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2483 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2484 case EVR_item: // used internally for items
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2485 case EVR_metainfo: // used internally for meta info datasets
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2486 case EVR_dataset: // used internally for datasets
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2487 case EVR_fileFormat: // used internally for DICOM files
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2488 case EVR_dicomDir: // used internally for DICOMDIR objects
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2489 case EVR_dirRecord: // used internally for DICOMDIR records
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2490 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2491 case EVR_pixelItem: // used internally for pixel items in a compressed image
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2492 case EVR_PixelData: // used internally for uncompressed pixeld data
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2493 case EVR_OverlayData: // used internally for overlay data
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2494 {
3195 880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2495 visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2496 return;
3198 7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2497 }
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2498
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2499
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2500 /**
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2501 * Default case.
7724ed267b5c unit testing dicomweb conversion Sebastien Jodogne <s.jodogne@gmail.com> parents: 3195 diff changeset	2502 **/
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2503
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2504 default:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2505 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2506 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2507 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2508 catch (boost::bad_lexical_cast&)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2509 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2510 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2511 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2512 catch (std::bad_cast&)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2513 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2514 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2515 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2516 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2517
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2518
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2519 static void ApplyVisitorToElement(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2520 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2521 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2522 const std::vector<size_t>& parentIndexes,
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2523 Encoding encoding,
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2524 bool hasCodeExtensions)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2525 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2526 assert(parentTags.size() == parentIndexes.size());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2527
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2528 DicomTag tag(FromDcmtkBridge::Convert(element.getTag()));
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2529
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2530 if (element.isLeaf())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2531 {
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2532 ApplyVisitorToLeaf(element, visitor, parentTags, parentIndexes, tag, encoding, hasCodeExtensions);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2533 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2534 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2535 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2536 // "All subclasses of DcmElement except for DcmSequenceOfItems
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2537 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2538 // etc. are not." The following dynamic_cast is thus OK.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2539 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2540
3195 880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2541 if (sequence.card() == 0)
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2542 {
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2543 visitor.VisitEmptySequence(parentTags, parentIndexes, tag);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2544 }
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2545 else
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2546 {
3195 880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2547 std::vector<DicomTag> tags = parentTags;
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2548 std::vector<size_t> indexes = parentIndexes;
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2549 tags.push_back(tag);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2550 indexes.push_back(0);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2551
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2552 for (unsigned long i = 0; i < sequence.card(); i++)
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2553 {
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2554 indexes.back() = static_cast<size_t>(i);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2555 DcmItem* child = sequence.getItem(i);
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2556 ApplyVisitorToDataset(*child, visitor, tags, indexes, encoding, hasCodeExtensions);
3195 880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2557 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2558 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2559 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2560 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2561
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2562
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2563 void FromDcmtkBridge::Apply(DcmItem& dataset,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2564 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2565 Encoding defaultEncoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2566 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2567 std::vector<DicomTag> parentTags;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2568 std::vector<size_t> parentIndexes;
3217 cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2569 bool hasCodeExtensions;
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2570 Encoding encoding = DetectEncoding(hasCodeExtensions, dataset, defaultEncoding);
cf8cbeb35f33 preliminary support of Korean character set Sebastien Jodogne <s.jodogne@gmail.com> parents: 3209 diff changeset	2571 ApplyVisitorToDataset(dataset, visitor, parentTags, parentIndexes, encoding, hasCodeExtensions);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2572 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	2573 }
3730 ae31ba2b09a6 toolbox: LookupTransferSyntax() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3727 diff changeset	2574
ae31ba2b09a6 toolbox: LookupTransferSyntax() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3727 diff changeset	2575
ae31ba2b09a6 toolbox: LookupTransferSyntax() Sebastien Jodogne <s.jodogne@gmail.com> parents: 3727 diff changeset	2576 #include "./FromDcmtkBridge_TransferSyntaxes.impl.h"

Mercurial > hg > orthanc

annotate Core/DicomParsing/FromDcmtkBridge.cpp @ 3769:eb044cc49d51