orthanc: Core/DicomParsing/FromDcmtkBridge.cpp annotate

annotate Core/DicomParsing/FromDcmtkBridge.cpp @ 2512:4dcafa8d6633

SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid

author	Sebastien Jodogne <s.jodogne@gmail.com>
date	Wed, 28 Mar 2018 15:20:50 +0200
parents	83b8b6743531
children	97a74f0eac7a

rev	line source
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1 /**
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	2 * Orthanc - A Lightweight, RESTful DICOM Store
1900 b1291df2f780 2016 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1876 diff changeset	3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288 6e7e5ed91c2d upgrade to year 2015 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1147 diff changeset	4 * Department, University Hospital of Liege, Belgium
2447 878b59270859 upgrade to year 2018 Sebastien Jodogne <s.jodogne@gmail.com> parents: 2431 diff changeset	5 * Copyright (C) 2017-2018 Osimis S.A., Belgium
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	6 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	7 * This program is free software: you can redistribute it and/or
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	8 * modify it under the terms of the GNU General Public License as
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	9 * published by the Free Software Foundation, either version 3 of the
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	10 * License, or (at your option) any later version.
136 fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	11 *
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	12 * In addition, as a special exception, the copyright holders of this
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	13 * program give permission to link the code of its release with the
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	15 * that use the same license as the "OpenSSL" library), and distribute
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	16 * the linked executables. You must obey the GNU General Public License
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	17 * in all respects for all of the code used other than "OpenSSL". If you
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	18 * modify file(s) with this exception, you may extend this exception to
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	19 * your version of the file(s), but you are not obligated to do so. If
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	20 * you do not wish to do so, delete this exception statement from your
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	21 * version. If you delete this exception statement from all source files
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	22 * in the program, then also delete it here.
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	23 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	24 * This program is distributed in the hope that it will be useful, but
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	25 * WITHOUT ANY WARRANTY; without even the implied warranty of
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	27 * General Public License for more details.
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	28 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	29 * You should have received a copy of the GNU General Public License
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	31 **/
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	32
448 9d830dcc7730 missing copyright information Sebastien Jodogne <s.jodogne@gmail.com> parents: 419 diff changeset	33
2382 7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	34 #include "../PrecompiledHeaders.h"
824 a811bdf8b8eb precompiled headers Sebastien Jodogne <s.jodogne@gmail.com> parents: 799 diff changeset	35
71 aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	36 #ifndef NOMINMAX
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	37 #define NOMINMAX
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	38 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	39
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	40 #if !defined(ORTHANC_SANDBOXED)
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	41 # error The macro ORTHANC_SANDBOXED must be defined
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	42 #endif
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	43
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	44 #include "FromDcmtkBridge.h"
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	45 #include "ToDcmtkBridge.h"
2382 7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	46 #include "../Logging.h"
7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	47 #include "../Toolbox.h"
7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	48 #include "../OrthancException.h"
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	49
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	50 #if ORTHANC_SANDBOXED == 0
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	51 # include "../SystemToolbox.h"
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	52 # include "../TemporaryFile.h"
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	53 #endif
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	54
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	55 #include <list>
71 aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	56 #include <limits>
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	57
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	58 #include <boost/lexical_cast.hpp>
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	59 #include <boost/filesystem.hpp>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	60 #include <boost/algorithm/string/predicate.hpp>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	61
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	62 #include <dcmtk/dcmdata/dcdeftag.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	63 #include <dcmtk/dcmdata/dcdicent.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	64 #include <dcmtk/dcmdata/dcdict.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	65 #include <dcmtk/dcmdata/dcfilefo.h>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	66 #include <dcmtk/dcmdata/dcostrmb.h>
b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	67 #include <dcmtk/dcmdata/dcpixel.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	68 #include <dcmtk/dcmdata/dcuid.h>
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	69 #include <dcmtk/dcmdata/dcistrmb.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	70
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	71 #include <dcmtk/dcmdata/dcvrae.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	72 #include <dcmtk/dcmdata/dcvras.h>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	73 #include <dcmtk/dcmdata/dcvrat.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	74 #include <dcmtk/dcmdata/dcvrcs.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	75 #include <dcmtk/dcmdata/dcvrda.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	76 #include <dcmtk/dcmdata/dcvrds.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	77 #include <dcmtk/dcmdata/dcvrdt.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	78 #include <dcmtk/dcmdata/dcvrfd.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	79 #include <dcmtk/dcmdata/dcvrfl.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	80 #include <dcmtk/dcmdata/dcvris.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	81 #include <dcmtk/dcmdata/dcvrlo.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	82 #include <dcmtk/dcmdata/dcvrlt.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	83 #include <dcmtk/dcmdata/dcvrpn.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	84 #include <dcmtk/dcmdata/dcvrsh.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	85 #include <dcmtk/dcmdata/dcvrsl.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	86 #include <dcmtk/dcmdata/dcvrss.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	87 #include <dcmtk/dcmdata/dcvrst.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	88 #include <dcmtk/dcmdata/dcvrtm.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	89 #include <dcmtk/dcmdata/dcvrui.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	90 #include <dcmtk/dcmdata/dcvrul.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	91 #include <dcmtk/dcmdata/dcvrus.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	92 #include <dcmtk/dcmdata/dcvrut.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	93
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	94 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	95 # include <EmbeddedResources.h>
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	96 #endif
682 efc4928be6fb Recover pixel data for more transfer syntaxes (notably JPEG) Sebastien Jodogne <s.jodogne@gmail.com> parents: 677 diff changeset	97
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	98 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	99 # include <dcmtk/dcmjpeg/djdecode.h>
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	100 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	101
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	102 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	103 # include <dcmtk/dcmjpls/djdecode.h>
1930 1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	104 #endif
1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	105
1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	106
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	107 namespace Orthanc
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	108 {
285 4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	109 static inline uint16_t GetCharValue(char c)
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	110 {
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	111 if (c >= '0' && c <= '9')
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	112 return c - '0';
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	113 else if (c >= 'a' && c <= 'f')
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	114 return c - 'a' + 10;
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	115 else if (c >= 'A' && c <= 'F')
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	116 return c - 'A' + 10;
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	117 else
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	118 return 0;
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	119 }
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	120
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	121 static inline uint16_t GetTagValue(const char* c)
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	122 {
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	123 return ((GetCharValue(c[0]) << 12) +
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	124 (GetCharValue(c[1]) << 8) +
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	125 (GetCharValue(c[2]) << 4) +
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	126 GetCharValue(c[3]));
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	127 }
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	128
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	129
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	130 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	131 static void LoadEmbeddedDictionary(DcmDataDictionary& dictionary,
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	132 EmbeddedResources::FileResourceId resource)
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	133 {
2017 08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	134 std::string content;
08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	135 EmbeddedResources::GetFileResource(content, resource);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	136
2143 fd5875662670 creation of namespace SystemToolbox Sebastien Jodogne <s.jodogne@gmail.com> parents: 2142 diff changeset	137 TemporaryFile tmp;
2017 08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	138 tmp.Write(content);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	139
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	140 if (!dictionary.loadDictionary(tmp.GetPath().c_str()))
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	141 {
2017 08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	142 LOG(ERROR) << "Cannot read embedded dictionary. Under Windows, make sure that "
08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	143 << "your TEMP directory does not contain special characters.";
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	144 throw OrthancException(ErrorCode_InternalError);
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	145 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	146 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	147
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	148 #else
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	149 static void LoadExternalDictionary(DcmDataDictionary& dictionary,
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	150 const std::string& directory,
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	151 const std::string& filename)
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	152 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	153 boost::filesystem::path p = directory;
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	154 p = p / filename;
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	155
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	156 LOG(WARNING) << "Loading the external DICOM dictionary " << p;
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	157
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	158 if (!dictionary.loadDictionary(p.string().c_str()))
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	159 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	160 throw OrthancException(ErrorCode_InternalError);
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	161 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	162 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	163 #endif
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	164
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	165
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	166 namespace
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	167 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	168 class DictionaryLocker
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	169 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	170 private:
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	171 DcmDataDictionary& dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	172
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	173 public:
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	174 DictionaryLocker() : dictionary_(dcmDataDict.wrlock())
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	175 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	176 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	177
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	178 ~DictionaryLocker()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	179 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	180 dcmDataDict.unlock();
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	181 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	182
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	183 DcmDataDictionary& operator*()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	184 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	185 return dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	186 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	187
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	188 DcmDataDictionary* operator->()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	189 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	190 return &dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	191 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	192 };
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	193 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	194
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	195
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	196 void FromDcmtkBridge::InitializeDictionary(bool loadPrivateDictionary)
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	197 {
2296 17e8e8e1ff3d log dcmtk version Sebastien Jodogne <s.jodogne@gmail.com> parents: 2287 diff changeset	198 LOG(INFO) << "Using DCTMK version: " << DCMTK_VERSION_NUMBER;
17e8e8e1ff3d log dcmtk version Sebastien Jodogne <s.jodogne@gmail.com> parents: 2287 diff changeset	199
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	200 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	201 DictionaryLocker locker;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	202
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	203 locker->clear();
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	204
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	205 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	206 LOG(WARNING) << "Loading the embedded dictionaries";
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	207 /**
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	208 * Do not load DICONDE dictionary, it breaks the other tags. The
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	209 * command "strace storescu 2>&1 \|grep dic" shows that DICONDE
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	210 * dictionary is not loaded by storescu.
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	211 **/
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	212 //LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_DICONDE);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	213
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	214 LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_DICOM);
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	215
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	216 if (loadPrivateDictionary)
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	217 {
2152 cbebc5d072b0 Use of DCMTK 3.6.1 dictionary of private tags in standalone builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 2151 diff changeset	218 LOG(INFO) << "Loading the embedded dictionary of private tags";
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	219 LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_PRIVATE);
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	220 }
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	221 else
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	222 {
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	223 LOG(INFO) << "The dictionary of private tags has not been loaded";
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	224 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	225
2364 ae50eccd41b7 compilation succeeds on OpenBSD jodogne parents: 2296 diff changeset	226 #elif defined(__linux__) \|\| defined(__FreeBSD_kernel__) \|\| defined(__FreeBSD__) \|\| defined(__OpenBSD__)
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	227 std::string path = DCMTK_DICTIONARY_DIR;
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	228
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	229 const char* env = std::getenv(DCM_DICT_ENVIRONMENT_VARIABLE);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	230 if (env != NULL)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	231 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	232 path = std::string(env);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	233 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	234
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	235 LoadExternalDictionary(*locker, path, "dicom.dic");
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	236
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	237 if (loadPrivateDictionary)
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	238 {
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	239 LoadExternalDictionary(*locker, path, "private.dic");
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	240 }
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	241 else
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	242 {
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	243 LOG(INFO) << "The dictionary of private tags has not been loaded";
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	244 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	245
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	246 #else
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	247 #error Support your platform here
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	248 #endif
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	249 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	250
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	251 /* make sure data dictionary is loaded */
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	252 if (!dcmDataDict.isDictionaryLoaded())
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	253 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	254 LOG(ERROR) << "No DICOM dictionary loaded, check environment variable: " << DCM_DICT_ENVIRONMENT_VARIABLE;
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	255 throw OrthancException(ErrorCode_InternalError);
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	256 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	257
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	258 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	259 // Test the dictionary with a simple DICOM tag
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	260 DcmTag key(0x0010, 0x1030); // This is PatientWeight
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	261 if (key.getEVR() != EVR_DS)
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	262 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	263 LOG(ERROR) << "The DICOM dictionary has not been correctly read";
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	264 throw OrthancException(ErrorCode_InternalError);
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	265 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	266 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	267 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	268
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	269
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	270 void FromDcmtkBridge::RegisterDictionaryTag(const DicomTag& tag,
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	271 ValueRepresentation vr,
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	272 const std::string& name,
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	273 unsigned int minMultiplicity,
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	274 unsigned int maxMultiplicity,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	275 const std::string& privateCreator)
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	276 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	277 if (minMultiplicity < 1)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	278 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	279 throw OrthancException(ErrorCode_ParameterOutOfRange);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	280 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	281
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	282 bool arbitrary = false;
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	283 if (maxMultiplicity == 0)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	284 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	285 maxMultiplicity = DcmVariableVM;
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	286 arbitrary = true;
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	287 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	288 else if (maxMultiplicity < minMultiplicity)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	289 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	290 throw OrthancException(ErrorCode_ParameterOutOfRange);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	291 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	292
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	293 DcmEVR evr = ToDcmtkBridge::Convert(vr);
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	294
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	295 LOG(INFO) << "Registering tag in dictionary: " << tag << " " << (DcmVR(evr).getValidVRName()) << " "
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	296 << name << " (multiplicity: " << minMultiplicity << "-"
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	297 << (arbitrary ? "n" : boost::lexical_cast<std::string>(maxMultiplicity)) << ")";
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	298
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	299 std::auto_ptr<DcmDictEntry> entry;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	300 if (privateCreator.empty())
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	301 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	302 if (tag.GetGroup() % 2 == 1)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	303 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	304 char buf[128];
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	305 sprintf(buf, "Warning: You are registering a private tag (%04x,%04x), "
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	306 "but no private creator was associated with it",
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	307 tag.GetGroup(), tag.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	308 LOG(WARNING) << buf;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	309 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	310
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	311 entry.reset(new DcmDictEntry(tag.GetGroup(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	312 tag.GetElement(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	313 evr, name.c_str(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	314 static_cast<int>(minMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	315 static_cast<int>(maxMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	316 NULL /* version */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	317 OFTrue /* doCopyString */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	318 NULL /* private creator */));
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	319 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	320 else
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	321 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	322 // "Private Data Elements have an odd Group Number that is not
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	323 // (0001,eeee), (0003,eeee), (0005,eeee), (0007,eeee), or
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	324 // (FFFF,eeee)."
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	325 if (tag.GetGroup() % 2 == 0 /* even */ \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	326 tag.GetGroup() == 0x0001 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	327 tag.GetGroup() == 0x0003 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	328 tag.GetGroup() == 0x0005 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	329 tag.GetGroup() == 0x0007 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	330 tag.GetGroup() == 0xffff)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	331 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	332 char buf[128];
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	333 sprintf(buf, "Trying to register private tag (%04x,%04x), but it must have an odd group >= 0x0009",
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	334 tag.GetGroup(), tag.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	335 LOG(ERROR) << buf;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	336 throw OrthancException(ErrorCode_ParameterOutOfRange);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	337 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	338
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	339 entry.reset(new DcmDictEntry(tag.GetGroup(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	340 tag.GetElement(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	341 evr, name.c_str(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	342 static_cast<int>(minMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	343 static_cast<int>(maxMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	344 "private" /* version */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	345 OFTrue /* doCopyString */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	346 privateCreator.c_str()));
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	347 }
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	348
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	349 entry->setGroupRangeRestriction(DcmDictRange_Unspecified);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	350 entry->setElementRangeRestriction(DcmDictRange_Unspecified);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	351
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	352 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	353 DictionaryLocker locker;
2116 2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	354
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	355 if (locker->findEntry(name.c_str()))
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	356 {
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	357 LOG(ERROR) << "Cannot register two tags with the same symbolic name \"" << name << "\"";
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	358 throw OrthancException(ErrorCode_AlreadyExistingTag);
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	359 }
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	360
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	361 locker->addEntry(entry.release());
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	362 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	363 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	364
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	365
1936 dba0db0a94b4 generalization Sebastien Jodogne <s.jodogne@gmail.com> parents: 1935 diff changeset	366 Encoding FromDcmtkBridge::DetectEncoding(DcmItem& dataset,
1928 84c7eaeb5244 Configuration::GetDefaultEncoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 1927 diff changeset	367 Encoding defaultEncoding)
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	368 {
1928 84c7eaeb5244 Configuration::GetDefaultEncoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 1927 diff changeset	369 Encoding encoding = defaultEncoding;
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	370
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	371 OFString tmp;
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	372 if (dataset.findAndGetOFString(DCM_SpecificCharacterSet, tmp).good())
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	373 {
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	374 std::string characterSet = Toolbox::StripSpaces(std::string(tmp.c_str()));
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	375
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	376 if (characterSet.empty())
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	377 {
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	378 // Empty specific character set tag: Use the default encoding
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	379 }
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	380 else if (GetDicomEncoding(encoding, characterSet.c_str()))
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	381 {
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	382 // The specific character set is supported by the Orthanc core
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	383 }
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	384 else
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	385 {
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	386 LOG(WARNING) << "Value of Specific Character Set (0008,0005) is not supported: " << characterSet
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	387 << ", fallback to ASCII (remove all special characters)";
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	388 encoding = Encoding_Ascii;
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	389 }
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	390 }
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	391 else
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	392 {
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	393 // No specific character set tag: Use the default encoding
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	394 }
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	395
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	396 return encoding;
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	397 }
2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	398
2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	399
2125 b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	400 void FromDcmtkBridge::ExtractDicomSummary(DicomMap& target,
b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	401 DcmItem& dataset,
b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	402 unsigned int maxStringLength,
b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	403 Encoding defaultEncoding)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	404 {
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	405 std::set<DicomTag> ignoreTagLength;
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	406
1928 84c7eaeb5244 Configuration::GetDefaultEncoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 1927 diff changeset	407 Encoding encoding = DetectEncoding(dataset, defaultEncoding);
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	408
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	409 target.Clear();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	410 for (unsigned long i = 0; i < dataset.card(); i++)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	411 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	412 DcmElement* element = dataset.getElement(i);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	413 if (element && element->isLeaf())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	414 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	415 target.SetValue(element->getTag().getGTag(),
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	416 element->getTag().getETag(),
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	417 ConvertLeafElement(*element, DicomToJsonFlags_Default,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	418 maxStringLength, encoding, ignoreTagLength));
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	419 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	420 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	421 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	422
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	423
991 2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	424 DicomTag FromDcmtkBridge::Convert(const DcmTag& tag)
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	425 {
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	426 return DicomTag(tag.getGTag(), tag.getETag());
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	427 }
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	428
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	429
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	430 DicomTag FromDcmtkBridge::GetTag(const DcmElement& element)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	431 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	432 return DicomTag(element.getGTag(), element.getETag());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	433 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	434
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	435
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	436 DicomValue* FromDcmtkBridge::ConvertLeafElement(DcmElement& element,
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	437 DicomToJsonFlags flags,
1929 cda5b0ab4ce5 ORTHANC_MAXIMUM_TAG_LENGTH made explicit Sebastien Jodogne <s.jodogne@gmail.com> parents: 1928 diff changeset	438 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	439 Encoding encoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	440 const std::set<DicomTag>& ignoreTagLength)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	441 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	442 if (!element.isLeaf())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	443 {
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	444 // This function is only applicable to leaf elements
bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	445 throw OrthancException(ErrorCode_BadParameterType);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	446 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	447
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	448 char *c = NULL;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	449 if (element.isaString() &&
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	450 element.getString(c).good())
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	451 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	452 if (c == NULL) // This case corresponds to the empty string
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	453 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	454 return new DicomValue("", false);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	455 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	456 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	457 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	458 std::string s(c);
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	459 std::string utf8 = Toolbox::ConvertToUtf8(s, encoding);
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	460
1929 cda5b0ab4ce5 ORTHANC_MAXIMUM_TAG_LENGTH made explicit Sebastien Jodogne <s.jodogne@gmail.com> parents: 1928 diff changeset	461 if (maxStringLength != 0 &&
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	462 utf8.size() > maxStringLength &&
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	463 ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	464 {
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	465 return new DicomValue; // Too long, create a NULL value
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	466 }
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	467 else
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	468 {
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	469 return new DicomValue(utf8, false);
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	470 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	471 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	472 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	473
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	474
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	475 if (element.getVR() == EVR_UN)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	476 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	477 // Unknown value representation: Lookup in the dictionary. This
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	478 // is notably the case for private tags registered with the
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	479 // "Dictionary" configuration option.
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	480 DictionaryLocker locker;
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	481
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	482 const DcmDictEntry* entry = locker->findEntry(element.getTag().getXTag(),
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	483 element.getTag().getPrivateCreator());
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	484 if (entry != NULL &&
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	485 entry->getVR().isaString())
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	486 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	487 Uint8* data = NULL;
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	488
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	489 // At (*), we do not try and convert to UTF-8, as nothing says
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	490 // the encoding of the private tag is the same as that of the
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	491 // remaining of the DICOM dataset. Only go for ASCII strings.
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	492
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	493 if (element.getUint8Array(data) == EC_Normal &&
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	494 Toolbox::IsAsciiString(data, element.getLength())) // (*)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	495 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	496 if (data == NULL)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	497 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	498 return new DicomValue("", false); // Empty string
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	499 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	500 else if (maxStringLength != 0 &&
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	501 element.getLength() > maxStringLength &&
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	502 ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	503 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	504 return new DicomValue; // Too long, create a NULL value
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	505 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	506 else
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	507 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	508 std::string s(reinterpret_cast<const char*>(data), element.getLength());
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	509 return new DicomValue(s, false);
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	510 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	511 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	512 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	513 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	514
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	515
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	516 try
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	517 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	518 // http://support.dcmtk.org/docs/dcvr_8h-source.html
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	519 switch (element.getVR())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	520 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	521
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	522 /**
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	523 * Deal with binary data (including PixelData).
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	524 **/
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	525
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	526 case EVR_OB: // other byte
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	527 case EVR_OF: // other float
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	528 case EVR_OW: // other word
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	529 case EVR_UN: // unknown value representation
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	530 case EVR_ox: // OB or OW depending on context
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	531 case EVR_DS: // decimal string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	532 case EVR_IS: // integer string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	533 case EVR_AS: // age string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	534 case EVR_DA: // date string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	535 case EVR_DT: // date time string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	536 case EVR_TM: // time string
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	537 case EVR_AE: // application entity title
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	538 case EVR_CS: // code string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	539 case EVR_SH: // short string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	540 case EVR_LO: // long string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	541 case EVR_ST: // short text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	542 case EVR_LT: // long text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	543 case EVR_UT: // unlimited text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	544 case EVR_PN: // person name
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	545 case EVR_UI: // unique identifier
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	546 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	547 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	548 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	549 if (!(flags & DicomToJsonFlags_ConvertBinaryToNull))
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	550 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	551 Uint8* data = NULL;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	552 if (element.getUint8Array(data) == EC_Normal)
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	553 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	554 return new DicomValue(reinterpret_cast<const char*>(data), element.getLength(), true);
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	555 }
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	556 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	557
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	558 return new DicomValue;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	559 }
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	560
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	561 /**
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	562 * Numeric types
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	563 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	564
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	565 case EVR_SL: // signed long
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	566 {
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	567 Sint32 f;
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	568 if (dynamic_cast<DcmSignedLong&>(element).getSint32(f).good())
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	569 return new DicomValue(boost::lexical_cast<std::string>(f), false);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	570 else
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	571 return new DicomValue;
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	572 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	573
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	574 case EVR_SS: // signed short
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	575 {
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	576 Sint16 f;
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	577 if (dynamic_cast<DcmSignedShort&>(element).getSint16(f).good())
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	578 return new DicomValue(boost::lexical_cast<std::string>(f), false);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	579 else
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	580 return new DicomValue;
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	581 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	582
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	583 case EVR_UL: // unsigned long
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	584 {
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	585 Uint32 f;
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	586 if (dynamic_cast<DcmUnsignedLong&>(element).getUint32(f).good())
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	587 return new DicomValue(boost::lexical_cast<std::string>(f), false);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	588 else
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	589 return new DicomValue;
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	590 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	591
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	592 case EVR_US: // unsigned short
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	593 {
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	594 Uint16 f;
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	595 if (dynamic_cast<DcmUnsignedShort&>(element).getUint16(f).good())
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	596 return new DicomValue(boost::lexical_cast<std::string>(f), false);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	597 else
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	598 return new DicomValue;
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	599 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	600
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	601 case EVR_FL: // float single-precision
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	602 {
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	603 Float32 f;
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	604 if (dynamic_cast<DcmFloatingPointSingle&>(element).getFloat32(f).good())
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	605 return new DicomValue(boost::lexical_cast<std::string>(f), false);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	606 else
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	607 return new DicomValue;
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	608 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	609
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	610 case EVR_FD: // float double-precision
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	611 {
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	612 Float64 f;
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	613 if (dynamic_cast<DcmFloatingPointDouble&>(element).getFloat64(f).good())
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	614 return new DicomValue(boost::lexical_cast<std::string>(f), false);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	615 else
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	616 return new DicomValue;
1131 ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	617 }
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	618
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	619
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	620 /**
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	621 * Attribute tag.
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	622 **/
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	623
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	624 case EVR_AT:
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	625 {
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	626 DcmTagKey tag;
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	627 if (dynamic_cast<DcmAttributeTag&>(element).getTagVal(tag, 0).good())
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	628 {
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	629 DicomTag t(tag.getGroup(), tag.getElement());
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	630 return new DicomValue(t.Format(), false);
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	631 }
1131 ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	632 else
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	633 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	634 return new DicomValue;
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	635 }
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	636 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	637
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	638
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	639 /**
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	640 * Sequence types, should never occur at this point because of
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	641 * "element.isLeaf()".
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	642 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	643
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	644 case EVR_SQ: // sequence of items
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	645 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	646
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	647
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	648 /**
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	649 * Internal to DCMTK.
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	650 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	651
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	652 case EVR_xs: // SS or US depending on context
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	653 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	654 case EVR_na: // na="not applicable", for data which has no VR
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	655 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	656 case EVR_item: // used internally for items
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	657 case EVR_metainfo: // used internally for meta info datasets
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	658 case EVR_dataset: // used internally for datasets
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	659 case EVR_fileFormat: // used internally for DICOM files
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	660 case EVR_dicomDir: // used internally for DICOMDIR objects
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	661 case EVR_dirRecord: // used internally for DICOMDIR records
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	662 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	663 case EVR_pixelItem: // used internally for pixel items in a compressed image
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	664 case EVR_PixelData: // used internally for uncompressed pixeld data
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	665 case EVR_OverlayData: // used internally for overlay data
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	666 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	667
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	668
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	669 /**
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	670 * Default case.
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	671 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	672
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	673 default:
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	674 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	675 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	676 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	677 catch (boost::bad_lexical_cast&)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	678 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	679 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	680 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	681 catch (std::bad_cast&)
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	682 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	683 return new DicomValue;
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	684 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	685 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	686
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	687
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	688 static Json::Value& PrepareNode(Json::Value& parent,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	689 DcmElement& element,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	690 DicomToJsonFormat format)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	691 {
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	692 assert(parent.type() == Json::objectValue);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	693
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	694 DicomTag tag(FromDcmtkBridge::GetTag(element));
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	695 const std::string formattedTag = tag.Format();
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	696
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	697 if (format == DicomToJsonFormat_Short)
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	698 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	699 parent[formattedTag] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	700 return parent[formattedTag];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	701 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	702
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	703 // This code gives access to the name of the private tags
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	704 std::string tagName = FromDcmtkBridge::GetTagName(element);
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	705
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	706 switch (format)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	707 {
1860 c7d70f659190 DicomToJsonFormat_Simple -> DicomToJsonFormat_Human Sebastien Jodogne <s.jodogne@gmail.com> parents: 1854 diff changeset	708 case DicomToJsonFormat_Human:
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	709 parent[tagName] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	710 return parent[tagName];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	711
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	712 case DicomToJsonFormat_Full:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	713 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	714 parent[formattedTag] = Json::objectValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	715 Json::Value& node = parent[formattedTag];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	716
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	717 if (element.isLeaf())
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	718 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	719 node["Name"] = tagName;
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	720
2076 ec2ad6ac741e fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2074 diff changeset	721 if (element.getTag().getPrivateCreator() != NULL)
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	722 {
2076 ec2ad6ac741e fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2074 diff changeset	723 node["PrivateCreator"] = element.getTag().getPrivateCreator();
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	724 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	725
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	726 return node;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	727 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	728 else
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	729 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	730 node["Name"] = tagName;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	731 node["Type"] = "Sequence";
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	732 node["Value"] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	733 return node["Value"];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	734 }
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	735 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	736
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	737 default:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	738 throw OrthancException(ErrorCode_ParameterOutOfRange);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	739 }
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	740 }
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	741
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	742
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	743 static void LeafValueToJson(Json::Value& target,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	744 const DicomValue& value,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	745 DicomToJsonFormat format,
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	746 DicomToJsonFlags flags,
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	747 unsigned int maxStringLength)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	748 {
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	749 Json::Value* targetValue = NULL;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	750 Json::Value* targetType = NULL;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	751
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	752 switch (format)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	753 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	754 case DicomToJsonFormat_Short:
1860 c7d70f659190 DicomToJsonFormat_Simple -> DicomToJsonFormat_Human Sebastien Jodogne <s.jodogne@gmail.com> parents: 1854 diff changeset	755 case DicomToJsonFormat_Human:
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	756 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	757 assert(target.type() == Json::nullValue);
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	758 targetValue = &target;
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	759 break;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	760 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	761
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	762 case DicomToJsonFormat_Full:
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	763 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	764 assert(target.type() == Json::objectValue);
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	765 target["Value"] = Json::nullValue;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	766 target["Type"] = Json::nullValue;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	767 targetType = &target["Type"];
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	768 targetValue = &target["Value"];
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	769 break;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	770 }
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	771
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	772 default:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	773 throw OrthancException(ErrorCode_ParameterOutOfRange);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	774 }
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	775
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	776 assert(targetValue != NULL);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	777 assert(targetValue->type() == Json::nullValue);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	778 assert(targetType == NULL \|\| targetType->type() == Json::nullValue);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	779
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	780 if (value.IsNull())
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	781 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	782 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	783 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	784 *targetType = "Null";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	785 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	786 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	787 else if (value.IsBinary())
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	788 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	789 if (flags & DicomToJsonFlags_ConvertBinaryToAscii)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	790 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	791 *targetValue = Toolbox::ConvertToAscii(value.GetContent());
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	792 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	793 else
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	794 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	795 std::string s;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	796 value.FormatDataUriScheme(s);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	797 *targetValue = s;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	798 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	799
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	800 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	801 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	802 *targetType = "Binary";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	803 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	804 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	805 else if (maxStringLength == 0 \|\|
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	806 value.GetContent().size() <= maxStringLength)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	807 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	808 *targetValue = value.GetContent();
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	809
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	810 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	811 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	812 *targetType = "String";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	813 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	814 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	815 else
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	816 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	817 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	818 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	819 *targetType = "TooLong";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	820 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	821 }
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	822 }
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	823
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	824
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	825 void FromDcmtkBridge::ElementToJson(Json::Value& parent,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	826 DcmElement& element,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	827 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	828 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	829 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	830 Encoding encoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	831 const std::set<DicomTag>& ignoreTagLength)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	832 {
1691 e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	833 if (parent.type() == Json::nullValue)
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	834 {
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	835 parent = Json::objectValue;
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	836 }
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	837
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	838 assert(parent.type() == Json::objectValue);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	839 Json::Value& target = PrepareNode(parent, element, format);
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	840
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	841 if (element.isLeaf())
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	842 {
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	843 // The "0" below lets "LeafValueToJson()" take care of "TooLong" values
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	844 std::auto_ptr<DicomValue> v(FromDcmtkBridge::ConvertLeafElement
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	845 (element, flags, 0, encoding, ignoreTagLength));
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	846
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	847 if (ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	848 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	849 LeafValueToJson(target, *v, format, flags, maxStringLength);
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	850 }
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	851 else
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	852 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	853 LeafValueToJson(target, *v, format, flags, 0);
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	854 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	855 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	856 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	857 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	858 assert(target.type() == Json::nullValue);
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	859 target = Json::arrayValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	860
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	861 // "All subclasses of DcmElement except for DcmSequenceOfItems
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	862 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	863 // etc. are not." The following dynamic_cast is thus OK.
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	864 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	865
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	866 for (unsigned long i = 0; i < sequence.card(); i++)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	867 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	868 DcmItem* child = sequence.getItem(i);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	869 Json::Value& v = target.append(Json::objectValue);
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	870 DatasetToJson(v, *child, format, flags, maxStringLength, encoding, ignoreTagLength);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	871 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	872 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	873 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	874
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	875
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	876 void FromDcmtkBridge::DatasetToJson(Json::Value& parent,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	877 DcmItem& item,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	878 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	879 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	880 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	881 Encoding encoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	882 const std::set<DicomTag>& ignoreTagLength)
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	883 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	884 assert(parent.type() == Json::objectValue);
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	885
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	886 for (unsigned long i = 0; i < item.card(); i++)
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	887 {
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	888 DcmElement* element = item.getElement(i);
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	889 if (element == NULL)
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	890 {
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	891 throw OrthancException(ErrorCode_InternalError);
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	892 }
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	893
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	894 DicomTag tag(FromDcmtkBridge::Convert(element->getTag()));
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	895
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	896 /element->getTag().isPrivate()/
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	897 if (tag.IsPrivate() &&
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	898 !(flags & DicomToJsonFlags_IncludePrivateTags))
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	899 {
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	900 continue;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	901 }
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	902
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	903 if (!(flags & DicomToJsonFlags_IncludeUnknownTags))
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	904 {
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	905 DictionaryLocker locker;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	906 if (locker->findEntry(element->getTag(), NULL) == NULL)
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	907 {
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	908 continue;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	909 }
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	910 }
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	911
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	912 DcmEVR evr = element->getTag().getEVR();
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	913 if (evr == EVR_OB \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	914 evr == EVR_OF \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	915 evr == EVR_OW \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	916 evr == EVR_UN \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	917 evr == EVR_ox)
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	918 {
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	919 // This is a binary tag
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	920 if ((tag == DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludePixelData)) \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	921 (tag != DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludeBinary)))
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	922 {
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	923 continue;
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	924 }
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	925 }
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	926
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	927 FromDcmtkBridge::ElementToJson(parent, *element, format, flags,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	928 maxStringLength, encoding, ignoreTagLength);
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	929 }
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	930 }
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	931
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	932
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	933 void FromDcmtkBridge::ExtractDicomAsJson(Json::Value& target,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	934 DcmDataset& dataset,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	935 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	936 DicomToJsonFlags flags,
2131 bb199bccdc45 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 2129 diff changeset	937 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	938 Encoding defaultEncoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	939 const std::set<DicomTag>& ignoreTagLength)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	940 {
2131 bb199bccdc45 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 2129 diff changeset	941 Encoding encoding = DetectEncoding(dataset, defaultEncoding);
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	942
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	943 target = Json::objectValue;
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	944 DatasetToJson(target, dataset, format, flags, maxStringLength, encoding, ignoreTagLength);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	945 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	946
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	947
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	948 void FromDcmtkBridge::ExtractHeaderAsJson(Json::Value& target,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	949 DcmMetaInfo& dataset,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	950 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	951 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	952 unsigned int maxStringLength)
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	953 {
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	954 std::set<DicomTag> ignoreTagLength;
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	955 target = Json::objectValue;
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	956 DatasetToJson(target, dataset, format, flags, maxStringLength, Encoding_Ascii, ignoreTagLength);
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	957 }
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	958
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	959
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	960
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	961 static std::string GetTagNameInternal(DcmTag& tag)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	962 {
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	963 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	964 // Some patches for important tags because of different DICOM
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	965 // dictionaries between DCMTK versions
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	966 DicomTag tmp(tag.getGroup(), tag.getElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	967 std::string n = tmp.GetMainTagsName();
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	968 if (n.size() != 0)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	969 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	970 return n;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	971 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	972 // End of patches
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	973 }
106 332fec038d52 patch for dcmtk dictionaries jodogne parents: 80 diff changeset	974
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	975 #if 0
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	976 // This version explicitly calls the dictionary
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	977 const DcmDataDictionary& dict = dcmDataDict.rdlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	978 const DcmDictEntry* entry = dict.findEntry(tag, NULL);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	979
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	980 std::string s(DcmTag_ERROR_TagName);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	981 if (entry != NULL)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	982 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	983 s = std::string(entry->getTagName());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	984 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	985
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	986 dcmDataDict.unlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	987 return s;
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	988 #else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	989 const char* name = tag.getTagName();
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	990 if (name == NULL)
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	991 {
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	992 return DcmTag_ERROR_TagName;
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	993 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	994 else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	995 {
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	996 return std::string(name);
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	997 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	998 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	999 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1000
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1001
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1002 std::string FromDcmtkBridge::GetTagName(const DicomTag& t,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1003 const std::string& privateCreator)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1004 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1005 DcmTag tag(t.GetGroup(), t.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1006
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1007 if (!privateCreator.empty())
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1008 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1009 tag.setPrivateCreator(privateCreator.c_str());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1010 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1011
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1012 return GetTagNameInternal(tag);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1013 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1014
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1015
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1016 std::string FromDcmtkBridge::GetTagName(const DcmElement& element)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1017 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1018 // Copy the tag to ensure const-correctness of DcmElement. Note
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1019 // that the private creator information is also copied.
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1020 DcmTag tag(element.getTag());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1021
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1022 return GetTagNameInternal(tag);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1023 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1024
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1025
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1026
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1027 DicomTag FromDcmtkBridge::ParseTag(const char* name)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1028 {
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1029 if (strlen(name) == 9 &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1030 isxdigit(name[0]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1031 isxdigit(name[1]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1032 isxdigit(name[2]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1033 isxdigit(name[3]) &&
991 2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	1034 (name[4] == '-' \|\| name[4] == ',') &&
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1035 isxdigit(name[5]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1036 isxdigit(name[6]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1037 isxdigit(name[7]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1038 isxdigit(name[8]))
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1039 {
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1040 uint16_t group = GetTagValue(name);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1041 uint16_t element = GetTagValue(name + 5);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1042 return DicomTag(group, element);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1043 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1044
1861 a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1045 if (strlen(name) == 8 &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1046 isxdigit(name[0]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1047 isxdigit(name[1]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1048 isxdigit(name[2]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1049 isxdigit(name[3]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1050 isxdigit(name[4]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1051 isxdigit(name[5]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1052 isxdigit(name[6]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1053 isxdigit(name[7]))
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1054 {
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1055 uint16_t group = GetTagValue(name);
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1056 uint16_t element = GetTagValue(name + 4);
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1057 return DicomTag(group, element);
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1058 }
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1059
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1060 #if 0
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1061 const DcmDataDictionary& dict = dcmDataDict.rdlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1062 const DcmDictEntry* entry = dict.findEntry(name);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1063
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1064 if (entry == NULL)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1065 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1066 dcmDataDict.unlock();
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	1067 throw OrthancException(ErrorCode_UnknownDicomTag);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1068 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1069 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1070 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1071 DcmTagKey key = entry->getKey();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1072 DicomTag tag(key.getGroup(), key.getElement());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1073 dcmDataDict.unlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1074 return tag;
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1075 }
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1076 #else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1077 DcmTag tag;
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1078 if (DcmTag::findTagFromName(name, tag).good())
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1079 {
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1080 return DicomTag(tag.getGTag(), tag.getETag());
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1081 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1082 else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1083 {
2470 45de30d4f362 log Sebastien Jodogne <s.jodogne@gmail.com> parents: 2447 diff changeset	1084 LOG(INFO) << "Unknown DICOM tag: \"" << name << "\"";
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	1085 throw OrthancException(ErrorCode_UnknownDicomTag);
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1086 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1087 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1088 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1089
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1090
1655 e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1091 bool FromDcmtkBridge::IsUnknownTag(const DicomTag& tag)
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1092 {
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1093 DcmTag tmp(tag.GetGroup(), tag.GetElement());
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1094 return tmp.isUnknownVR();
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1095 }
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1096
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1097
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1098 void FromDcmtkBridge::ToJson(Json::Value& result,
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1099 const DicomMap& values,
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1100 bool simplify)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1101 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1102 if (result.type() != Json::objectValue)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1103 {
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	1104 throw OrthancException(ErrorCode_BadParameterType);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1105 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1106
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1107 result.clear();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1108
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1109 for (DicomMap::Map::const_iterator
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 465 diff changeset	1110 it = values.map_.begin(); it != values.map_.end(); ++it)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1111 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1112 // TODO Inject PrivateCreator if some is available in the DicomMap?
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1113 const std::string tagName = GetTagName(it->first, "");
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1114
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1115 if (simplify)
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1116 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1117 if (it->second->IsNull())
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1118 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1119 result[tagName] = Json::nullValue;
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1120 }
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1121 else
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1122 {
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1123 // TODO IsBinary
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1124 result[tagName] = it->second->GetContent();
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1125 }
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1126 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1127 else
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1128 {
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1129 Json::Value value = Json::objectValue;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1130
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1131 value["Name"] = tagName;
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1132
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1133 if (it->second->IsNull())
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1134 {
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1135 value["Type"] = "Null";
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1136 value["Value"] = Json::nullValue;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1137 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1138 else
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1139 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1140 // TODO IsBinary
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1141 value["Type"] = "String";
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1142 value["Value"] = it->second->GetContent();
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1143 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1144
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1145 result[it->first.Format()] = value;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1146 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1147 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1148 }
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1149
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1150
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1151 std::string FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType level)
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1152 {
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1153 char uid[100];
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1154
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1155 switch (level)
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1156 {
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1157 case ResourceType_Patient:
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1158 // The "PatientID" field is of type LO (Long String), 64
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1159 // Bytes Maximum. An UUID is of length 36, thus it can be used
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1160 // as a random PatientID.
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	1161 return Toolbox::GenerateUuid();
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1162
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1163 case ResourceType_Instance:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1164 return dcmGenerateUniqueIdentifier(uid, SITE_INSTANCE_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1165
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1166 case ResourceType_Series:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1167 return dcmGenerateUniqueIdentifier(uid, SITE_SERIES_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1168
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1169 case ResourceType_Study:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1170 return dcmGenerateUniqueIdentifier(uid, SITE_STUDY_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1171
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1172 default:
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1173 throw OrthancException(ErrorCode_ParameterOutOfRange);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1174 }
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1175 }
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1176
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1177 bool FromDcmtkBridge::SaveToMemoryBuffer(std::string& buffer,
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1178 DcmDataset& dataSet)
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1179 {
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1180 // Determine the transfer syntax which shall be used to write the
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1181 // information to the file. We always switch to the Little Endian
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1182 // syntax, with explicit length.
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1183
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1184 // http://support.dcmtk.org/docs/dcxfer_8h-source.html
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1185
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1186
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1187 /**
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1188 * Note that up to Orthanc 0.7.1 (inclusive), the
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1189 * "EXS_LittleEndianExplicit" was always used to save the DICOM
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1190 * dataset into memory. We now keep the original transfer syntax
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1191 * (if available).
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1192 **/
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1193 E_TransferSyntax xfer = dataSet.getOriginalXfer();
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1194 if (xfer == EXS_Unknown)
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1195 {
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1196 // No information about the original transfer syntax: This is
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1197 // most probably a DICOM dataset that was read from memory.
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1198 xfer = EXS_LittleEndianExplicit;
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1199 }
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1200
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1201 E_EncodingType encodingType = /opt_sequenceType/ EET_ExplicitLength;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1202
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1203 // Create the meta-header information
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1204 DcmFileFormat ff(&dataSet);
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1205 ff.validateMetaInfo(xfer);
1316 1c8dfedefefe Fix anonymization generating non-portable DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 1307 diff changeset	1206 ff.removeInvalidGroups();
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1207
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1208 // Create a memory buffer with the proper size
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1209 {
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1210 const uint32_t estimatedSize = ff.calcElementLength(xfer, encodingType); // (*)
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1211 buffer.resize(estimatedSize);
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1212 }
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1213
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1214 DcmOutputBufferStream ob(&buffer[0], buffer.size());
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1215
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1216 // Fill the memory buffer with the meta-header and the dataset
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1217 ff.transferInit();
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1218 OFCondition c = ff.write(ob, xfer, encodingType, NULL,
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1219 /opt_groupLength/ EGL_recalcGL,
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1220 /opt_paddingType/ EPD_withoutPadding);
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1221 ff.transferEnd();
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1222
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1223 if (c.good())
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1224 {
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1225 // The DICOM file is successfully written, truncate the target
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1226 // buffer if its size was overestimated by (*)
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1227 ob.flush();
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1228
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1229 size_t effectiveSize = static_cast<size_t>(ob.tell());
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1230 if (effectiveSize < buffer.size())
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1231 {
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1232 buffer.resize(effectiveSize);
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1233 }
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1234
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1235 return true;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1236 }
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1237 else
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1238 {
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1239 // Error
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1240 buffer.clear();
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1241 return false;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1242 }
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1243 }
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1244
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1245
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1246 ValueRepresentation FromDcmtkBridge::LookupValueRepresentation(const DicomTag& tag)
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1247 {
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1248 DcmTag t(tag.GetGroup(), tag.GetElement());
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1249 return Convert(t.getEVR());
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1250 }
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1251
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1252 ValueRepresentation FromDcmtkBridge::Convert(const DcmEVR vr)
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1253 {
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1254 switch (vr)
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1255 {
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1256 case EVR_AE:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1257 return ValueRepresentation_ApplicationEntity;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1258
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1259 case EVR_AS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1260 return ValueRepresentation_AgeString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1261
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1262 case EVR_AT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1263 return ValueRepresentation_AttributeTag;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1264
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1265 case EVR_CS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1266 return ValueRepresentation_CodeString;
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1267
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1268 case EVR_DA:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1269 return ValueRepresentation_Date;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1270
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1271 case EVR_DS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1272 return ValueRepresentation_DecimalString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1273
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1274 case EVR_DT:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1275 return ValueRepresentation_DateTime;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1276
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1277 case EVR_FL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1278 return ValueRepresentation_FloatingPointSingle;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1279
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1280 case EVR_FD:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1281 return ValueRepresentation_FloatingPointDouble;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1282
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1283 case EVR_IS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1284 return ValueRepresentation_IntegerString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1285
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1286 case EVR_LO:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1287 return ValueRepresentation_LongString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1288
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1289 case EVR_LT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1290 return ValueRepresentation_LongText;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1291
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1292 case EVR_OB:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1293 return ValueRepresentation_OtherByte;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1294
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1295 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1296 /*case EVR_OD:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1297 return ValueRepresentation_OtherDouble;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1298
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1299 case EVR_OF:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1300 return ValueRepresentation_OtherFloat;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1301
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1302 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1303 /*case EVR_OL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1304 return ValueRepresentation_OtherLong;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1305
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1306 case EVR_OW:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1307 return ValueRepresentation_OtherWord;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1308
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1309 case EVR_PN:
2007 655489d9165d DicomMap::ParseDicomMetaInformation() Sebastien Jodogne <s.jodogne@gmail.com> parents: 2006 diff changeset	1310 return ValueRepresentation_PersonName;
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1311
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1312 case EVR_SH:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1313 return ValueRepresentation_ShortString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1314
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1315 case EVR_SL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1316 return ValueRepresentation_SignedLong;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1317
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1318 case EVR_SQ:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1319 return ValueRepresentation_Sequence;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1320
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1321 case EVR_SS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1322 return ValueRepresentation_SignedShort;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1323
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1324 case EVR_ST:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1325 return ValueRepresentation_ShortText;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1326
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1327 case EVR_TM:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1328 return ValueRepresentation_Time;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1329
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1330 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1331 /*case EVR_UC:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1332 return ValueRepresentation_UnlimitedCharacters;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1333
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1334 case EVR_UI:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1335 return ValueRepresentation_UniqueIdentifier;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1336
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1337 case EVR_UL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1338 return ValueRepresentation_UnsignedLong;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1339
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1340 case EVR_UN:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1341 return ValueRepresentation_Unknown;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1342
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1343 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1344 /*case EVR_UR:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1345 return ValueRepresentation_UniversalResource;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1346
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1347 case EVR_US:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1348 return ValueRepresentation_UnsignedShort;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1349
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1350 case EVR_UT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1351 return ValueRepresentation_UnlimitedText;
1792 b769623c806c safety check Sebastien Jodogne <s.jodogne@gmail.com> parents: 1765 diff changeset	1352
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1353 default:
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1354 return ValueRepresentation_NotSupported;
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1355 }
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1356 }
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1357
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1358
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1359 static bool IsBinaryTag(const DcmTag& key)
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1360 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1361 return (key.isUnknownVR() \|\|
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1362 key.getEVR() == EVR_OB \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1363 key.getEVR() == EVR_OF \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1364 key.getEVR() == EVR_OW \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1365 key.getEVR() == EVR_UN \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1366 key.getEVR() == EVR_ox);
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1367 }
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1368
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1369
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1370 DcmElement* FromDcmtkBridge::CreateElementForTag(const DicomTag& tag)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1371 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1372 DcmTag key(tag.GetGroup(), tag.GetElement());
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1373
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1374 if (tag.IsPrivate() \|\|
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1375 IsBinaryTag(key))
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1376 {
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1377 return new DcmOtherByteOtherWord(key);
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1378 }
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1379
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1380 switch (key.getEVR())
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1381 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1382 // http://support.dcmtk.org/docs/dcvr_8h-source.html
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1383
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1384 /**
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1385 * Binary types, handled above
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1386 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1387
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1388 case EVR_OB: // other byte
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1389 case EVR_OF: // other float
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1390 case EVR_OW: // other word
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1391 case EVR_UN: // unknown value representation
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1392 case EVR_ox: // OB or OW depending on context
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1393 throw OrthancException(ErrorCode_InternalError);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1394
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1395
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1396 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1397 * String types.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1398 * http://support.dcmtk.org/docs/classDcmByteString.html
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1399 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1400
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1401 case EVR_AS: // age string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1402 return new DcmAgeString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1403
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1404 case EVR_AE: // application entity title
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1405 return new DcmApplicationEntity(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1406
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1407 case EVR_CS: // code string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1408 return new DcmCodeString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1409
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1410 case EVR_DA: // date string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1411 return new DcmDate(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1412
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1413 case EVR_DT: // date time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1414 return new DcmDateTime(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1415
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1416 case EVR_DS: // decimal string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1417 return new DcmDecimalString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1418
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1419 case EVR_IS: // integer string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1420 return new DcmIntegerString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1421
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1422 case EVR_TM: // time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1423 return new DcmTime(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1424
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1425 case EVR_UI: // unique identifier
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1426 return new DcmUniqueIdentifier(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1427
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1428 case EVR_ST: // short text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1429 return new DcmShortText(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1430
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1431 case EVR_LO: // long string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1432 return new DcmLongString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1433
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1434 case EVR_LT: // long text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1435 return new DcmLongText(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1436
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1437 case EVR_UT: // unlimited text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1438 return new DcmUnlimitedText(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1439
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1440 case EVR_SH: // short string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1441 return new DcmShortString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1442
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1443 case EVR_PN: // person name
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1444 return new DcmPersonName(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1445
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1446
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1447 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1448 * Numerical types
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1449 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1450
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1451 case EVR_SL: // signed long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1452 return new DcmSignedLong(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1453
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1454 case EVR_SS: // signed short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1455 return new DcmSignedShort(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1456
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1457 case EVR_UL: // unsigned long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1458 return new DcmUnsignedLong(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1459
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1460 case EVR_US: // unsigned short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1461 return new DcmUnsignedShort(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1462
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1463 case EVR_FL: // float single-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1464 return new DcmFloatingPointSingle(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1465
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1466 case EVR_FD: // float double-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1467 return new DcmFloatingPointDouble(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1468
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1469
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1470 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1471 * Sequence types, should never occur at this point.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1472 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1473
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1474 case EVR_SQ: // sequence of items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1475 throw OrthancException(ErrorCode_ParameterOutOfRange);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1476
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1477
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1478 /**
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1479 * TODO
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1480 **/
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1481
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1482 case EVR_AT: // attribute tag
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1483 throw OrthancException(ErrorCode_NotImplemented);
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1484
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1485
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1486 /**
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1487 * Internal to DCMTK.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1488 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1489
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1490 case EVR_xs: // SS or US depending on context
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1491 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1492 case EVR_na: // na="not applicable", for data which has no VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1493 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1494 case EVR_item: // used internally for items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1495 case EVR_metainfo: // used internally for meta info datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1496 case EVR_dataset: // used internally for datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1497 case EVR_fileFormat: // used internally for DICOM files
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1498 case EVR_dicomDir: // used internally for DICOMDIR objects
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1499 case EVR_dirRecord: // used internally for DICOMDIR records
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1500 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1501 case EVR_pixelItem: // used internally for pixel items in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1502 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1503 case EVR_PixelData: // used internally for uncompressed pixeld data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1504 case EVR_OverlayData: // used internally for overlay data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1505 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1506 default:
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1507 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1508 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1509
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1510 throw OrthancException(ErrorCode_InternalError);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1511 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1512
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1513
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1514
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1515 void FromDcmtkBridge::FillElementWithString(DcmElement& element,
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1516 const DicomTag& tag,
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1517 const std::string& utf8Value,
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1518 bool decodeDataUriScheme,
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1519 Encoding dicomEncoding)
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1520 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1521 std::string binary;
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1522 const std::string* decoded = &utf8Value;
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1523
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1524 if (decodeDataUriScheme &&
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1525 boost::starts_with(utf8Value, "data:application/octet-stream;base64,"))
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1526 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1527 std::string mime;
1981 4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1528 if (!Toolbox::DecodeDataUriScheme(mime, binary, utf8Value))
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1529 {
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1530 throw OrthancException(ErrorCode_BadFileFormat);
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1531 }
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1532
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1533 decoded = &binary;
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1534 }
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1535 else if (dicomEncoding != Encoding_Utf8)
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1536 {
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1537 binary = Toolbox::ConvertFromUtf8(utf8Value, dicomEncoding);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1538 decoded = &binary;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1539 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1540
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1541 DcmTag key(tag.GetGroup(), tag.GetElement());
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1542
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1543 if (tag.IsPrivate() \|\|
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1544 IsBinaryTag(key))
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1545 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1546 if (element.putUint8Array((const Uint8*) decoded->c_str(), decoded->size()).good())
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1547 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1548 return;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1549 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1550 else
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1551 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1552 throw OrthancException(ErrorCode_InternalError);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1553 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1554 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1555
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1556 bool ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1557
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1558 try
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1559 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1560 switch (key.getEVR())
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1561 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1562 // http://support.dcmtk.org/docs/dcvr_8h-source.html
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1563
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1564 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1565 * TODO.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1566 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1567
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1568 case EVR_OB: // other byte
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1569 case EVR_OF: // other float
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1570 case EVR_OW: // other word
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1571 case EVR_AT: // attribute tag
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1572 throw OrthancException(ErrorCode_NotImplemented);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1573
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1574 case EVR_UN: // unknown value representation
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1575 throw OrthancException(ErrorCode_ParameterOutOfRange);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1576
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1577
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1578 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1579 * String types.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1580 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1581
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1582 case EVR_DS: // decimal string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1583 case EVR_IS: // integer string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1584 case EVR_AS: // age string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1585 case EVR_DA: // date string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1586 case EVR_DT: // date time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1587 case EVR_TM: // time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1588 case EVR_AE: // application entity title
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1589 case EVR_CS: // code string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1590 case EVR_SH: // short string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1591 case EVR_LO: // long string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1592 case EVR_ST: // short text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1593 case EVR_LT: // long text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1594 case EVR_UT: // unlimited text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1595 case EVR_PN: // person name
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1596 case EVR_UI: // unique identifier
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1597 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1598 ok = element.putString(decoded->c_str()).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1599 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1600 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1601
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1602
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1603 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1604 * Numerical types
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1605 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1606
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1607 case EVR_SL: // signed long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1608 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1609 ok = element.putSint32(boost::lexical_cast<Sint32>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1610 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1611 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1612
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1613 case EVR_SS: // signed short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1614 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1615 ok = element.putSint16(boost::lexical_cast<Sint16>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1616 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1617 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1618
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1619 case EVR_UL: // unsigned long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1620 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1621 ok = element.putUint32(boost::lexical_cast<Uint32>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1622 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1623 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1624
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1625 case EVR_US: // unsigned short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1626 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1627 ok = element.putUint16(boost::lexical_cast<Uint16>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1628 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1629 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1630
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1631 case EVR_FL: // float single-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1632 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1633 ok = element.putFloat32(boost::lexical_cast<float>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1634 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1635 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1636
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1637 case EVR_FD: // float double-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1638 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1639 ok = element.putFloat64(boost::lexical_cast<double>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1640 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1641 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1642
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1643
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1644 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1645 * Sequence types, should never occur at this point.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1646 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1647
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1648 case EVR_SQ: // sequence of items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1649 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1650 ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1651 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1652 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1653
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1654
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1655 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1656 * Internal to DCMTK.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1657 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1658
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1659 case EVR_ox: // OB or OW depending on context
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1660 case EVR_xs: // SS or US depending on context
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1661 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1662 case EVR_na: // na="not applicable", for data which has no VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1663 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1664 case EVR_item: // used internally for items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1665 case EVR_metainfo: // used internally for meta info datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1666 case EVR_dataset: // used internally for datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1667 case EVR_fileFormat: // used internally for DICOM files
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1668 case EVR_dicomDir: // used internally for DICOMDIR objects
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1669 case EVR_dirRecord: // used internally for DICOMDIR records
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1670 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1671 case EVR_pixelItem: // used internally for pixel items in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1672 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1673 case EVR_PixelData: // used internally for uncompressed pixeld data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1674 case EVR_OverlayData: // used internally for overlay data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1675 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1676 default:
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1677 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1678 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1679 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1680 catch (boost::bad_lexical_cast&)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1681 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1682 ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1683 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1684
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1685 if (!ok)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1686 {
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1687 LOG(ERROR) << "While creating a DICOM instance, tag (" << tag.Format()
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1688 << ") has out-of-range value: \"" << *decoded << "\"";
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1689 throw OrthancException(ErrorCode_BadFileFormat);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1690 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1691 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1692
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1693
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1694 DcmElement* FromDcmtkBridge::FromJson(const DicomTag& tag,
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1695 const Json::Value& value,
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1696 bool decodeDataUriScheme,
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1697 Encoding dicomEncoding)
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1698 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1699 std::auto_ptr<DcmElement> element;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1700
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1701 switch (value.type())
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1702 {
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1703 case Json::stringValue:
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1704 element.reset(CreateElementForTag(tag));
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1705 FillElementWithString(*element, tag, value.asString(), decodeDataUriScheme, dicomEncoding);
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1706 break;
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1707
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1708 case Json::nullValue:
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1709 element.reset(CreateElementForTag(tag));
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1710 FillElementWithString(*element, tag, "", decodeDataUriScheme, dicomEncoding);
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1711 break;
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1712
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1713 case Json::arrayValue:
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1714 {
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1715 DcmTag key(tag.GetGroup(), tag.GetElement());
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1716 if (key.getEVR() != EVR_SQ)
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1717 {
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1718 throw OrthancException(ErrorCode_BadParameterType);
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1719 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1720
2287 9f3414878c02 Fix Debian #865606 (orthanc FTBFS with libdcmtk-dev 3.6.1~20170228-2) Sebastien Jodogne <s.jodogne@gmail.com> parents: 2275 diff changeset	1721 DcmSequenceOfItems* sequence = new DcmSequenceOfItems(key);
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1722 element.reset(sequence);
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1723
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1724 for (Json::Value::ArrayIndex i = 0; i < value.size(); i++)
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1725 {
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1726 std::auto_ptr<DcmItem> item(new DcmItem);
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1727
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1728 Json::Value::Members members = value[i].getMemberNames();
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1729 for (Json::Value::ArrayIndex j = 0; j < members.size(); j++)
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1730 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1731 item->insert(FromJson(ParseTag(members[j]), value[i][members[j]], decodeDataUriScheme, dicomEncoding));
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1732 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1733
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1734 sequence->append(item.release());
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1735 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1736
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1737 break;
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1738 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1739
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1740 default:
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1741 throw OrthancException(ErrorCode_BadParameterType);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1742 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1743
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1744 return element.release();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1745 }
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	1746
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	1747
1924 6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1748 DcmPixelSequence* FromDcmtkBridge::GetPixelSequence(DcmDataset& dataset)
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1749 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1750 DcmElement *element = NULL;
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	1751 if (!dataset.findAndGetElement(DCM_PixelData, element).good())
1924 6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1752 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1753 throw OrthancException(ErrorCode_BadFileFormat);
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1754 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1755
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1756 DcmPixelData& pixelData = dynamic_cast<DcmPixelData&>(*element);
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1757 DcmPixelSequence* pixelSequence = NULL;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1758 if (!pixelData.getEncapsulatedRepresentation
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1759 (dataset.getOriginalXfer(), NULL, pixelSequence).good())
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1760 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1761 return NULL;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1762 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1763 else
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1764 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1765 return pixelSequence;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1766 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1767 }
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1768
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1769
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1770 Encoding FromDcmtkBridge::ExtractEncoding(const Json::Value& json,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1771 Encoding defaultEncoding)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1772 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1773 if (json.type() != Json::objectValue)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1774 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1775 throw OrthancException(ErrorCode_BadParameterType);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1776 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1777
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1778 Encoding encoding = defaultEncoding;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1779
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1780 const Json::Value::Members tags = json.getMemberNames();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1781
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1782 // Look for SpecificCharacterSet (0008,0005) in the JSON file
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1783 for (size_t i = 0; i < tags.size(); i++)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1784 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1785 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1786 if (tag == DICOM_TAG_SPECIFIC_CHARACTER_SET)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1787 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1788 const Json::Value& value = json[tags[i]];
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1789 if (value.type() != Json::stringValue \|\|
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1790 (value.asString().length() != 0 &&
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1791 !GetDicomEncoding(encoding, value.asCString())))
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1792 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1793 LOG(ERROR) << "Unknown encoding while creating DICOM from JSON: " << value;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1794 throw OrthancException(ErrorCode_BadRequest);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1795 }
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1796
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1797 if (value.asString().length() == 0)
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1798 {
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1799 return defaultEncoding;
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1800 }
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1801 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1802 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1803
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1804 return encoding;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1805 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1806
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1807
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1808 static void SetString(DcmDataset& target,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1809 const DcmTag& tag,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1810 const std::string& value)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1811 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1812 if (!target.putAndInsertString(tag, value.c_str()).good())
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1813 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1814 throw OrthancException(ErrorCode_InternalError);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1815 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1816 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1817
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1818
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1819 DcmDataset* FromDcmtkBridge::FromJson(const Json::Value& json, // Encoded using UTF-8
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1820 bool generateIdentifiers,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1821 bool decodeDataUriScheme,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1822 Encoding defaultEncoding)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1823 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1824 std::auto_ptr<DcmDataset> result(new DcmDataset);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1825 Encoding encoding = ExtractEncoding(json, defaultEncoding);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1826
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1827 SetString(*result, DCM_SpecificCharacterSet, GetDicomSpecificCharacterSet(encoding));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1828
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1829 const Json::Value::Members tags = json.getMemberNames();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1830
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1831 bool hasPatientId = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1832 bool hasStudyInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1833 bool hasSeriesInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1834 bool hasSopInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1835
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1836 for (size_t i = 0; i < tags.size(); i++)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1837 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1838 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1839 const Json::Value& value = json[tags[i]];
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1840
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1841 if (tag == DICOM_TAG_PATIENT_ID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1842 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1843 hasPatientId = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1844 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1845 else if (tag == DICOM_TAG_STUDY_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1846 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1847 hasStudyInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1848 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1849 else if (tag == DICOM_TAG_SERIES_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1850 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1851 hasSeriesInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1852 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1853 else if (tag == DICOM_TAG_SOP_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1854 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1855 hasSopInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1856 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1857
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1858 if (tag != DICOM_TAG_SPECIFIC_CHARACTER_SET)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1859 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1860 std::auto_ptr<DcmElement> element(FromDcmtkBridge::FromJson(tag, value, decodeDataUriScheme, encoding));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1861 const DcmTagKey& tag = element->getTag();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1862
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1863 result->findAndDeleteElement(tag);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1864
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1865 DcmElement* tmp = element.release();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1866 if (!result->insert(tmp, false, false).good())
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1867 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1868 delete tmp;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1869 throw OrthancException(ErrorCode_InternalError);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1870 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1871 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1872 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1873
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1874 if (!hasPatientId &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1875 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1876 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1877 SetString(*result, DCM_PatientID, GenerateUniqueIdentifier(ResourceType_Patient));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1878 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1879
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1880 if (!hasStudyInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1881 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1882 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1883 SetString(*result, DCM_StudyInstanceUID, GenerateUniqueIdentifier(ResourceType_Study));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1884 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1885
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1886 if (!hasSeriesInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1887 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1888 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1889 SetString(*result, DCM_SeriesInstanceUID, GenerateUniqueIdentifier(ResourceType_Series));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1890 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1891
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1892 if (!hasSopInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1893 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1894 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1895 SetString(*result, DCM_SOPInstanceUID, GenerateUniqueIdentifier(ResourceType_Instance));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1896 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1897
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1898 return result.release();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1899 }
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1900
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1901
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1902 DcmFileFormat* FromDcmtkBridge::LoadFromMemoryBuffer(const void* buffer,
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1903 size_t size)
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1904 {
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1905 DcmInputBufferStream is;
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1906 if (size > 0)
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1907 {
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1908 is.setBuffer(buffer, size);
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1909 }
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1910 is.setEos();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1911
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1912 std::auto_ptr<DcmFileFormat> result(new DcmFileFormat);
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1913
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1914 result->transferInit();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1915 if (!result->read(is).good())
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1916 {
2431 14537babc1e6 print error if unable to parse DICOM Sebastien Jodogne <s.jodogne@gmail.com> parents: 2409 diff changeset	1917 LOG(ERROR) << "Cannot parse an invalid DICOM file (size: " << size << " bytes)";
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1918 throw OrthancException(ErrorCode_BadFileFormat);
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1919 }
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1920
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1921 result->loadAllDataIntoMemory();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1922 result->transferEnd();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1923
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1924 return result.release();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1925 }
1998 9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1926
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1927
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1928 void FromDcmtkBridge::FromJson(DicomMap& target,
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1929 const Json::Value& source)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1930 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1931 if (source.type() != Json::objectValue)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1932 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1933 throw OrthancException(ErrorCode_BadFileFormat);
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1934 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1935
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1936 target.Clear();
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1937
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1938 Json::Value::Members members = source.getMemberNames();
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1939
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1940 for (size_t i = 0; i < members.size(); i++)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1941 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1942 const Json::Value& value = source[members[i]];
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1943
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1944 if (value.type() != Json::stringValue)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1945 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1946 throw OrthancException(ErrorCode_BadFileFormat);
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1947 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1948
2007 655489d9165d DicomMap::ParseDicomMetaInformation() Sebastien Jodogne <s.jodogne@gmail.com> parents: 2006 diff changeset	1949 target.SetValue(ParseTag(members[i]), value.asString(), false);
1998 9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1950 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1951 }
2207 6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1952
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1953
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1954 void FromDcmtkBridge::ChangeStringEncoding(DcmItem& dataset,
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1955 Encoding source,
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1956 Encoding target)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1957 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1958 // Recursive exploration of a dataset to change the encoding of
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1959 // each string-like element
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1960
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1961 if (source == target)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1962 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1963 return;
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1964 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1965
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1966 for (unsigned long i = 0; i < dataset.card(); i++)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1967 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1968 DcmElement* element = dataset.getElement(i);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1969 if (element)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1970 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1971 if (element->isLeaf())
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1972 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1973 char *c = NULL;
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1974 if (element->isaString() &&
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1975 element->getString(c).good() &&
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1976 c != NULL)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1977 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1978 std::string a = Toolbox::ConvertToUtf8(c, source);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1979 std::string b = Toolbox::ConvertFromUtf8(a, target);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1980 element->putString(b.c_str());
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1981 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1982 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1983 else
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1984 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1985 // "All subclasses of DcmElement except for DcmSequenceOfItems
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1986 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1987 // etc. are not." The following dynamic_cast is thus OK.
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1988 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(*element);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1989
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1990 for (unsigned long j = 0; j < sequence.card(); j++)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1991 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1992 ChangeStringEncoding(*sequence.getItem(j), source, target);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1993 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1994 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1995 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1996 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1997 }
2209 e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1998
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	1999
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2000 bool FromDcmtkBridge::LookupTransferSyntax(std::string& result,
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2001 DcmFileFormat& dicom)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2002 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2003 const char* value = NULL;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2004
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2005 if (dicom.getMetaInfo() != NULL &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2006 dicom.getMetaInfo()->findAndGetString(DCM_TransferSyntaxUID, value).good() &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2007 value != NULL)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2008 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2009 result.assign(value);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2010 return true;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2011 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2012 else
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2013 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2014 return false;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2015 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2016 }
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2017
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2018
2232 3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi Sebastien Jodogne <s.jodogne@gmail.com> parents: 2218 diff changeset	2019 #if ORTHANC_ENABLE_LUA == 1
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2020 void FromDcmtkBridge::ExecuteToDicom(DicomMap& target,
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2021 LuaFunctionCall& call)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2022 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2023 Json::Value output;
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2024 call.ExecuteToJson(output, true /* keep strings */);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2025
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2026 target.Clear();
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2027
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2028 if (output.type() == Json::arrayValue &&
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2029 output.size() == 0)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2030 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2031 // This case happens for empty tables
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2032 return;
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2033 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2034
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2035 if (output.type() != Json::objectValue)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2036 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2037 LOG(ERROR) << "Lua: IncomingFindRequestFilter must return a table";
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2038 throw OrthancException(ErrorCode_LuaBadOutput);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2039 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2040
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2041 Json::Value::Members members = output.getMemberNames();
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2042
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2043 for (size_t i = 0; i < members.size(); i++)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2044 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2045 if (output[members[i]].type() != Json::stringValue)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2046 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2047 LOG(ERROR) << "Lua: IncomingFindRequestFilter must return a table mapping names of DICOM tags to strings";
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2048 throw OrthancException(ErrorCode_LuaBadOutput);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2049 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2050
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2051 DicomTag tag(ParseTag(members[i]));
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2052 target.SetValue(tag, output[members[i]].asString(), false);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2053 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2054 }
2232 3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi Sebastien Jodogne <s.jodogne@gmail.com> parents: 2218 diff changeset	2055 #endif
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2056
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2057
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2058 void FromDcmtkBridge::ExtractDicomSummary(DicomMap& target,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2059 DcmItem& dataset)
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2060 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2061 ExtractDicomSummary(target, dataset,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2062 ORTHANC_MAXIMUM_TAG_LENGTH,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2063 GetDefaultDicomEncoding());
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2064 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2065
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2066
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2067 void FromDcmtkBridge::ExtractDicomAsJson(Json::Value& target,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2068 DcmDataset& dataset,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2069 const std::set<DicomTag>& ignoreTagLength)
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2070 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2071 ExtractDicomAsJson(target, dataset,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2072 DicomToJsonFormat_Full,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2073 DicomToJsonFlags_Default,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2074 ORTHANC_MAXIMUM_TAG_LENGTH,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2075 GetDefaultDicomEncoding(),
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2076 ignoreTagLength);
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2077 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2078
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2079
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2080 void FromDcmtkBridge::InitializeCodecs()
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2081 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2082 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2083 LOG(WARNING) << "Registering JPEG Lossless codecs in DCMTK";
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2084 DJLSDecoderRegistration::registerCodecs();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2085 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2086
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2087 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2088 LOG(WARNING) << "Registering JPEG codecs in DCMTK";
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2089 DJDecoderRegistration::registerCodecs();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2090 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2091 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2092
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2093
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2094 void FromDcmtkBridge::FinalizeCodecs()
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2095 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2096 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2097 // Unregister JPEG-LS codecs
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2098 DJLSDecoderRegistration::cleanup();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2099 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2100
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2101 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2102 // Unregister JPEG codecs
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2103 DJDecoderRegistration::cleanup();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2104 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2105 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2106
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2107
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2108
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2109 // Forward declaration
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2110 static void ApplyVisitorToElement(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2111 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2112 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2113 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2114 Encoding encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2115
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2116 static void ApplyVisitorToDataset(DcmItem& dataset,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2117 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2118 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2119 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2120 Encoding encoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2121 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2122 assert(parentTags.size() == parentIndexes.size());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2123
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2124 for (unsigned long i = 0; i < dataset.card(); i++)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2125 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2126 DcmElement* element = dataset.getElement(i);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2127 if (element == NULL)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2128 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2129 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2130 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2131 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2132 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2133 ApplyVisitorToElement(*element, visitor, parentTags, parentIndexes, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2134 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2135 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2136 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2137
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2138
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2139 static void ApplyVisitorToLeaf(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2140 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2141 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2142 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2143 const DicomTag& tag,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2144 Encoding encoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2145 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2146 // TODO - Merge this function with ConvertLeafElement()
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2147
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2148 assert(element.isLeaf());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2149
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2150 DcmEVR evr = element.getTag().getEVR();
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2151 ValueRepresentation vr = FromDcmtkBridge::Convert(evr);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2152
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2153 char *c = NULL;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2154 if (element.isaString() &&
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2155 element.getString(c).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2156 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2157 std::string utf8;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2158
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2159 if (c != NULL) // This case corresponds to the empty string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2160 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2161 std::string s(c);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2162 utf8 = Toolbox::ConvertToUtf8(s, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2163 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2164
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2165 std::string newValue;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2166 ITagVisitor::Action action = visitor.VisitString
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2167 (newValue, parentTags, parentIndexes, tag, vr, utf8);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2168
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2169 switch (action)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2170 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2171 case ITagVisitor::Action_None:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2172 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2173
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2174 case ITagVisitor::Action_Replace:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2175 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2176 std::string s = Toolbox::ConvertFromUtf8(newValue, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2177 if (element.putString(s.c_str(), s.size()) != EC_Normal)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2178 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2179 LOG(ERROR) << "Cannot replace value of tag: " << tag.Format();
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2180 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2181 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2182
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2183 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2184 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2185
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2186 default:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2187 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2188 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2189
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2190 return; // We're done
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2191 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2192
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2193
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2194 try
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2195 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2196 // http://support.dcmtk.org/docs/dcvr_8h-source.html
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2197 switch (element.getVR())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2198 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2199
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2200 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2201 * Deal with binary data (including PixelData).
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2202 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2203
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2204 case EVR_OB: // other byte
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2205 case EVR_OF: // other float
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2206 case EVR_OW: // other word
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2207 case EVR_UN: // unknown value representation
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2208 case EVR_ox: // OB or OW depending on context
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2209 case EVR_DS: // decimal string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2210 case EVR_IS: // integer string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2211 case EVR_AS: // age string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2212 case EVR_DA: // date string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2213 case EVR_DT: // date time string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2214 case EVR_TM: // time string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2215 case EVR_AE: // application entity title
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2216 case EVR_CS: // code string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2217 case EVR_SH: // short string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2218 case EVR_LO: // long string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2219 case EVR_ST: // short text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2220 case EVR_LT: // long text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2221 case EVR_UT: // unlimited text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2222 case EVR_PN: // person name
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2223 case EVR_UI: // unique identifier
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2224 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2225 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2226 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2227 Uint8* data = NULL;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2228
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2229 if (element.getUint8Array(data) == EC_Normal)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2230 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2231 visitor.VisitBinary(parentTags, parentIndexes, tag, vr, data, element.getLength());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2232 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2233 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2234 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2235 visitor.VisitUnknown(parentTags, parentIndexes, tag, vr);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2236 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2237
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2238 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2239 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2240
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2241 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2242 * Numeric types
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2243 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2244
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2245 case EVR_SL: // signed long
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2246 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2247 Sint32 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2248 if (dynamic_cast<DcmSignedLong&>(element).getSint32(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2249 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2250 visitor.VisitInteger(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2251 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2252
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2253 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2254 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2255
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2256 case EVR_SS: // signed short
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2257 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2258 Sint16 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2259 if (dynamic_cast<DcmSignedShort&>(element).getSint16(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2260 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2261 visitor.VisitInteger(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2262 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2263
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2264 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2265 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2266
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2267 case EVR_UL: // unsigned long
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2268 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2269 Uint32 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2270 if (dynamic_cast<DcmUnsignedLong&>(element).getUint32(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2271 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2272 visitor.VisitInteger(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2273 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2274
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2275 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2276 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2277
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2278 case EVR_US: // unsigned short
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2279 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2280 Uint16 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2281 if (dynamic_cast<DcmUnsignedShort&>(element).getUint16(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2282 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2283 visitor.VisitInteger(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2284 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2285
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2286 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2287 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2288
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2289 case EVR_FL: // float single-precision
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2290 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2291 Float32 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2292 if (dynamic_cast<DcmFloatingPointSingle&>(element).getFloat32(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2293 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2294 visitor.VisitDouble(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2295 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2296
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2297 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2298 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2299
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2300 case EVR_FD: // float double-precision
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2301 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2302 Float64 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2303 if (dynamic_cast<DcmFloatingPointDouble&>(element).getFloat64(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2304 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2305 visitor.VisitDouble(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2306 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2307
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2308 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2309 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2310
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2311
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2312 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2313 * Attribute tag.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2314 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2315
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2316 case EVR_AT:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2317 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2318 DcmTagKey tagKey;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2319 if (dynamic_cast<DcmAttributeTag&>(element).getTagVal(tagKey, 0).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2320 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2321 DicomTag t(tagKey.getGroup(), tagKey.getElement());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2322 visitor.VisitAttribute(parentTags, parentIndexes, tag, vr, t);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2323 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2324
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2325 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2326 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2327
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2328
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2329 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2330 * Sequence types, should never occur at this point because of
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2331 * "element.isLeaf()".
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2332 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2333
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2334 case EVR_SQ: // sequence of items
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2335 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2336
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2337
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2338 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2339 * Internal to DCMTK.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2340 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2341
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2342 case EVR_xs: // SS or US depending on context
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2343 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2344 case EVR_na: // na="not applicable", for data which has no VR
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2345 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2346 case EVR_item: // used internally for items
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2347 case EVR_metainfo: // used internally for meta info datasets
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2348 case EVR_dataset: // used internally for datasets
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2349 case EVR_fileFormat: // used internally for DICOM files
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2350 case EVR_dicomDir: // used internally for DICOMDIR objects
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2351 case EVR_dirRecord: // used internally for DICOMDIR records
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2352 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2353 case EVR_pixelItem: // used internally for pixel items in a compressed image
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2354 case EVR_PixelData: // used internally for uncompressed pixeld data
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2355 case EVR_OverlayData: // used internally for overlay data
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2356 visitor.VisitUnknown(parentTags, parentIndexes, tag, vr);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2357 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2358
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2359
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2360 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2361 * Default case.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2362 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2363
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2364 default:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2365 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2366 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2367 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2368 catch (boost::bad_lexical_cast&)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2369 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2370 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2371 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2372 catch (std::bad_cast&)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2373 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2374 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2375 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2376 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2377
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2378
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2379 static void ApplyVisitorToElement(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2380 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2381 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2382 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2383 Encoding encoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2384 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2385 assert(parentTags.size() == parentIndexes.size());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2386
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2387 DicomTag tag(FromDcmtkBridge::Convert(element.getTag()));
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2388
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2389 if (element.isLeaf())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2390 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2391 ApplyVisitorToLeaf(element, visitor, parentTags, parentIndexes, tag, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2392 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2393 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2394 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2395 // "All subclasses of DcmElement except for DcmSequenceOfItems
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2396 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2397 // etc. are not." The following dynamic_cast is thus OK.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2398 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2399
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2400 std::vector<DicomTag> tags = parentTags;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2401 std::vector<size_t> indexes = parentIndexes;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2402 tags.push_back(tag);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2403 indexes.push_back(0);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2404
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2405 for (unsigned long i = 0; i < sequence.card(); i++)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2406 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2407 indexes.back() = static_cast<size_t>(i);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2408 DcmItem* child = sequence.getItem(i);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2409 ApplyVisitorToDataset(*child, visitor, tags, indexes, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2410 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2411 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2412 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2413
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2414
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2415 void FromDcmtkBridge::Apply(DcmItem& dataset,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2416 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2417 Encoding defaultEncoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2418 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2419 std::vector<DicomTag> parentTags;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2420 std::vector<size_t> parentIndexes;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2421 Encoding encoding = DetectEncoding(dataset, defaultEncoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2422 ApplyVisitorToDataset(dataset, visitor, parentTags, parentIndexes, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2423 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	2424 }

Mercurial > hg > orthanc

annotate Core/DicomParsing/FromDcmtkBridge.cpp @ 2512:4dcafa8d6633