Mercurial > hg > orthanc

annotate OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.cpp @ 4941:96a3e81eba90 more-tags

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
performance warning
author Alain Mazy <am@osimis.io>
date Wed, 16 Mar 2022 09:50:33 +0100
parents 8422e4f99a18
children 3778a0433dd3
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
62
a70bb32802ae renaming Server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
2 * Orthanc - A Lightweight, RESTful DICOM Store
1900
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1876
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288
6e7e5ed91c2d upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1147
diff changeset
4 * Department, University Hospital of Liege, Belgium
4870
43e613a7756b upgrade to year 2022
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4845
diff changeset
5 * Copyright (C) 2017-2022 Osimis S.A., Belgium
43e613a7756b upgrade to year 2022
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4845
diff changeset
6 * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 *
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
8 * This program is free software: you can redistribute it and/or
4119
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4105
diff changeset
9 * modify it under the terms of the GNU Lesser General Public License
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4105
diff changeset
10 * as published by the Free Software Foundation, either version 3 of
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4105
diff changeset
11 * the License, or (at your option) any later version.
136
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
12 *
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 * This program is distributed in the hope that it will be useful, but
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
14 * WITHOUT ANY WARRANTY; without even the implied warranty of
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
4119
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4105
diff changeset
16 * Lesser General Public License for more details.
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
17 *
4119
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4105
diff changeset
18 * You should have received a copy of the GNU Lesser General Public
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4105
diff changeset
19 * License along with this program. If not, see
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4105
diff changeset
20 * <http://www.gnu.org/licenses/>.
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21 **/
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22
448
9d830dcc7730 missing copyright information
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 419
diff changeset
23
2382
7284093111b0 big reorganization to cleanly separate framework vs. server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2381
diff changeset
24 #include "../PrecompiledHeaders.h"
824
a811bdf8b8eb precompiled headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 799
diff changeset
25
71
aa65ced5f0f0 fix for visual studio
jodogne
parents: 62
diff changeset
26 #ifndef NOMINMAX
aa65ced5f0f0 fix for visual studio
jodogne
parents: 62
diff changeset
27 #define NOMINMAX
aa65ced5f0f0 fix for visual studio
jodogne
parents: 62
diff changeset
28 #endif
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29
2512
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2499
diff changeset
30 #if !defined(ORTHANC_SANDBOXED)
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2499
diff changeset
31 # error The macro ORTHANC_SANDBOXED must be defined
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2499
diff changeset
32 #endif
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2499
diff changeset
33
3117
c8b75e207a82 working on dcmtk 3.6.4 compatibility
jodogne
parents: 3060
diff changeset
34 #if !defined(DCMTK_VERSION_NUMBER)
c8b75e207a82 working on dcmtk 3.6.4 compatibility
jodogne
parents: 3060
diff changeset
35 # error The macro DCMTK_VERSION_NUMBER must be defined
c8b75e207a82 working on dcmtk 3.6.4 compatibility
jodogne
parents: 3060
diff changeset
36 #endif
c8b75e207a82 working on dcmtk 3.6.4 compatibility
jodogne
parents: 3060
diff changeset
37
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
38 #include "FromDcmtkBridge.h"
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
39 #include "ToDcmtkBridge.h"
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3708
diff changeset
40 #include "../Compatibility.h"
2382
7284093111b0 big reorganization to cleanly separate framework vs. server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2381
diff changeset
41 #include "../Logging.h"
7284093111b0 big reorganization to cleanly separate framework vs. server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2381
diff changeset
42 #include "../Toolbox.h"
7284093111b0 big reorganization to cleanly separate framework vs. server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2381
diff changeset
43 #include "../OrthancException.h"
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
44
2512
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2499
diff changeset
45 #if ORTHANC_SANDBOXED == 0
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2499
diff changeset
46 # include "../TemporaryFile.h"
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2499
diff changeset
47 #endif
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2499
diff changeset
48
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
49 #include <list>
71
aa65ced5f0f0 fix for visual studio
jodogne
parents: 62
diff changeset
50 #include <limits>
aa65ced5f0f0 fix for visual studio
jodogne
parents: 62
diff changeset
51
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
52 #include <boost/lexical_cast.hpp>
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
53 #include <boost/filesystem.hpp>
1927
b60f27664b8f simplification in FromDcmtkBridge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1924
diff changeset
54 #include <boost/algorithm/string/predicate.hpp>
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
55 #include <boost/algorithm/string/join.hpp>
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
56
1927
b60f27664b8f simplification in FromDcmtkBridge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1924
diff changeset
57 #include <dcmtk/dcmdata/dcdeftag.h>
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
58 #include <dcmtk/dcmdata/dcdicent.h>
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
59 #include <dcmtk/dcmdata/dcdict.h>
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
60 #include <dcmtk/dcmdata/dcfilefo.h>
3769
eb044cc49d51 compatibility with DCMTK 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
61 #include <dcmtk/dcmdata/dcistrmb.h>
1927
b60f27664b8f simplification in FromDcmtkBridge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1924
diff changeset
62 #include <dcmtk/dcmdata/dcostrmb.h>
b60f27664b8f simplification in FromDcmtkBridge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1924
diff changeset
63 #include <dcmtk/dcmdata/dcpixel.h>
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
64 #include <dcmtk/dcmdata/dcuid.h>
3769
eb044cc49d51 compatibility with DCMTK 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
65 #include <dcmtk/dcmdata/dcxfer.h>
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
66
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
67 #include <dcmtk/dcmdata/dcvrae.h>
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
68 #include <dcmtk/dcmdata/dcvras.h>
1927
b60f27664b8f simplification in FromDcmtkBridge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1924
diff changeset
69 #include <dcmtk/dcmdata/dcvrat.h>
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
70 #include <dcmtk/dcmdata/dcvrcs.h>
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
71 #include <dcmtk/dcmdata/dcvrda.h>
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
72 #include <dcmtk/dcmdata/dcvrds.h>
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
73 #include <dcmtk/dcmdata/dcvrdt.h>
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
74 #include <dcmtk/dcmdata/dcvrfd.h>
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
75 #include <dcmtk/dcmdata/dcvrfl.h>
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
76 #include <dcmtk/dcmdata/dcvris.h>
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
77 #include <dcmtk/dcmdata/dcvrlo.h>
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
78 #include <dcmtk/dcmdata/dcvrlt.h>
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
79 #include <dcmtk/dcmdata/dcvrpn.h>
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
80 #include <dcmtk/dcmdata/dcvrsh.h>
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
81 #include <dcmtk/dcmdata/dcvrsl.h>
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
82 #include <dcmtk/dcmdata/dcvrss.h>
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
83 #include <dcmtk/dcmdata/dcvrst.h>
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
84 #include <dcmtk/dcmdata/dcvrtm.h>
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
85 #include <dcmtk/dcmdata/dcvrui.h>
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
86 #include <dcmtk/dcmdata/dcvrul.h>
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
87 #include <dcmtk/dcmdata/dcvrus.h>
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
88 #include <dcmtk/dcmdata/dcvrut.h>
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
89
3209
f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3199
diff changeset
90 #if DCMTK_VERSION_NUMBER >= 361
f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3199
diff changeset
91 # include <dcmtk/dcmdata/dcvruc.h>
f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3199
diff changeset
92 # include <dcmtk/dcmdata/dcvrur.h>
f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3199
diff changeset
93 #endif
f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3199
diff changeset
94
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
95 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
4032
058b5ade8acd renaming embedded resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4030
diff changeset
96 # include <OrthancFrameworkResources.h>
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
97 #endif
682
efc4928be6fb Recover pixel data for more transfer syntaxes (notably JPEG)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 677
diff changeset
98
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
99 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
100 # include <dcmtk/dcmjpeg/djdecode.h>
3727
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
101 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
102 # include <dcmtk/dcmjpeg/djencode.h>
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
103 # endif
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
104 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
105
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
106 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
107 # include <dcmtk/dcmjpls/djdecode.h>
3727
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
108 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
109 # include <dcmtk/dcmjpls/djencode.h>
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
110 # endif
1930
1c147c3c3121 fix static builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
111 #endif
1c147c3c3121 fix static builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
112
1c147c3c3121 fix static builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
113
3748
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
114 #include <dcmtk/dcmdata/dcrledrg.h>
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
115 #if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
116 # include <dcmtk/dcmdata/dcrleerg.h>
3765
4a25727401cd first transcoding to jpeg 8bpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3748
diff changeset
117 # include <dcmtk/dcmimage/diregist.h> // include to support color images
3748
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
118 #endif
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
119
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
120
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
121 static bool hasExternalDictionaries_ = false;
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
122
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
123
62
a70bb32802ae renaming Server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
124 namespace Orthanc
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
125 {
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
126 static bool IsBinaryTag(const DcmTag& key)
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
127 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
128 return (key.isUnknownVR() ||
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
129 key.getEVR() == EVR_OB ||
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
130 key.getEVR() == EVR_OW ||
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
131 key.getEVR() == EVR_UN ||
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
132 key.getEVR() == EVR_ox);
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
133 }
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
134
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
135
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
136 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
137 static void LoadEmbeddedDictionary(DcmDataDictionary& dictionary,
4032
058b5ade8acd renaming embedded resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4030
diff changeset
138 FrameworkResources::FileResourceId resource)
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
139 {
2017
08ce34cfacad refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2007
diff changeset
140 std::string content;
4032
058b5ade8acd renaming embedded resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4030
diff changeset
141 FrameworkResources::GetFileResource(content, resource);
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
142
2513
97a74f0eac7a loading DICOM dictionaries in sandboxed environments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2512
diff changeset
143 #if ORTHANC_SANDBOXED == 0
2143
fd5875662670 creation of namespace SystemToolbox
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
144 TemporaryFile tmp;
2017
08ce34cfacad refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2007
diff changeset
145 tmp.Write(content);
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
146
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
147 if (!dictionary.loadDictionary(tmp.GetPath().c_str()))
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
148 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
149 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
150 "Cannot read embedded dictionary. Under Windows, make sure that "
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
151 "your TEMP directory does not contain special characters.");
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
152 }
2513
97a74f0eac7a loading DICOM dictionaries in sandboxed environments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2512
diff changeset
153 #else
97a74f0eac7a loading DICOM dictionaries in sandboxed environments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2512
diff changeset
154 if (!dictionary.loadFromMemory(content))
97a74f0eac7a loading DICOM dictionaries in sandboxed environments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2512
diff changeset
155 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
156 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
157 "Cannot read embedded dictionary. Under Windows, make sure that "
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
158 "your TEMP directory does not contain special characters.");
2513
97a74f0eac7a loading DICOM dictionaries in sandboxed environments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2512
diff changeset
159 }
97a74f0eac7a loading DICOM dictionaries in sandboxed environments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2512
diff changeset
160 #endif
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
161 }
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
162 #endif
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
163
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
164
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
165 namespace
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
166 {
4030
100fbe970762 DANGEROUS commit: removing HAS_EMBEDDED_RESOURCES
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4016
diff changeset
167 class DictionaryLocker : public boost::noncopyable
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
168 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
169 private:
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
170 DcmDataDictionary& dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
171
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
172 public:
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
173 DictionaryLocker() : dictionary_(dcmDataDict.wrlock())
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
174 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
175 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
176
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
177 ~DictionaryLocker()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
178 {
3117
c8b75e207a82 working on dcmtk 3.6.4 compatibility
jodogne
parents: 3060
diff changeset
179 #if DCMTK_VERSION_NUMBER >= 364
c8b75e207a82 working on dcmtk 3.6.4 compatibility
jodogne
parents: 3060
diff changeset
180 dcmDataDict.wrunlock();
c8b75e207a82 working on dcmtk 3.6.4 compatibility
jodogne
parents: 3060
diff changeset
181 #else
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
182 dcmDataDict.unlock();
3117
c8b75e207a82 working on dcmtk 3.6.4 compatibility
jodogne
parents: 3060
diff changeset
183 #endif
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
184 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
185
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
186 DcmDataDictionary& operator*()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
187 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
188 return dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
189 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
190
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
191 DcmDataDictionary* operator->()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
192 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
193 return &dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
194 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
195 };
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
196
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
197
4515
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
198 ORTHANC_FORCE_INLINE
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
199 static std::string FloatToString(float v)
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
200 {
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
201 /**
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
202 * From "boost::lexical_cast" documentation: "For more involved
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
203 * conversions, such as where precision or formatting need tighter
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
204 * control than is offered by the default behavior of
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
205 * lexical_cast, the conventional stringstream approach is
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
206 * recommended."
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
207 * https://www.boost.org/doc/libs/1_65_0/doc/html/boost_lexical_cast.html
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
208 * http://www.gotw.ca/publications/mill19.htm
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
209 *
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
210 * The precision of 17 corresponds to "defaultRealPrecision" in JsonCpp:
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
211 * https://github.com/open-source-parsers/jsoncpp/blob/master/include/json/value.h
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
212 **/
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
213
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
214 //return boost::lexical_cast<std::string>(v); // This was used in Orthanc <= 1.9.0
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
215
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
216 std::ostringstream ss;
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
217 ss << std::setprecision(17) << v;
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
218 return ss.str();
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
219 }
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
220
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
221
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
222 ORTHANC_FORCE_INLINE
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
223 static std::string DoubleToString(double v)
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
224 {
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
225 //return boost::lexical_cast<std::string>(v); // This was used in Orthanc <= 1.9.0
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
226
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
227 std::ostringstream ss;
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
228 ss << std::setprecision(17) << v;
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
229 return ss.str();
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
230 }
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
231
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
232
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
233 #define DCMTK_TO_CTYPE_CONVERTER(converter, cType, dcmtkType, getter, toStringFunction) \
3594
0654d0838de8 disable thread support in DCMTK if wasm/asm.js
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3577
diff changeset
234 \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3577
diff changeset
235 struct converter \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3577
diff changeset
236 { \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3577
diff changeset
237 typedef cType CType; \
0654d0838de8 disable thread support in DCMTK if wasm/asm.js
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3577
diff changeset
238 \
4515
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
239 ORTHANC_FORCE_INLINE \
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
240 static bool Apply(CType& result, \
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
241 DcmElement& element, \
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
242 size_t i) \
3594
0654d0838de8 disable thread support in DCMTK if wasm/asm.js
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3577
diff changeset
243 { \
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
244 return dynamic_cast<dcmtkType&>(element).getter(result, i).good(); \
3594
0654d0838de8 disable thread support in DCMTK if wasm/asm.js
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3577
diff changeset
245 } \
4515
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
246 \
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
247 ORTHANC_FORCE_INLINE \
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
248 static std::string ToString(CType value) \
4515
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
249 { \
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
250 return toStringFunction(value); \
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
251 } \
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
252 };
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
253
4515
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
254 DCMTK_TO_CTYPE_CONVERTER(DcmtkToSint32Converter, Sint32, DcmSignedLong, getSint32, boost::lexical_cast<std::string>)
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
255 DCMTK_TO_CTYPE_CONVERTER(DcmtkToSint16Converter, Sint16, DcmSignedShort, getSint16, boost::lexical_cast<std::string>)
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
256 DCMTK_TO_CTYPE_CONVERTER(DcmtkToUint32Converter, Uint32, DcmUnsignedLong, getUint32, boost::lexical_cast<std::string>)
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
257 DCMTK_TO_CTYPE_CONVERTER(DcmtkToUint16Converter, Uint16, DcmUnsignedShort, getUint16, boost::lexical_cast<std::string>)
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
258 DCMTK_TO_CTYPE_CONVERTER(DcmtkToFloat32Converter, Float32, DcmFloatingPointSingle, getFloat32, FloatToString)
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
259 DCMTK_TO_CTYPE_CONVERTER(DcmtkToFloat64Converter, Float64, DcmFloatingPointDouble, getFloat64, DoubleToString)
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
260
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
261
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
262 template <typename F>
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
263 static DicomValue* ApplyDcmtkToCTypeConverter(DcmElement& element)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
264 {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
265 F f;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
266 typename F::CType value;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
267
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
268 if (element.getLength() > sizeof(typename F::CType)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
269 && (element.getLength() % sizeof(typename F::CType)) == 0)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
270 {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
271 size_t count = element.getLength() / sizeof(typename F::CType);
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
272 std::vector<std::string> strings;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
273 for (size_t i = 0; i < count; i++) {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
274 if (f.Apply(value, element, i)) {
4515
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
275 strings.push_back(F::ToString(value));
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
276 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
277 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
278 return new DicomValue(boost::algorithm::join(strings, "\\"), false);
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
279 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
280 else if (f.Apply(value, element, 0)) {
4515
8734caa12448 Improved precision of floating-point numbers in DICOM-as-JSON and DICOM summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4514
diff changeset
281 return new DicomValue(F::ToString(value), false);
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
282 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
283 else {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
284 return new DicomValue;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
285 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
286 }
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
287 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
288
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
289
2151
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2143
diff changeset
290 void FromDcmtkBridge::InitializeDictionary(bool loadPrivateDictionary)
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
291 {
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
292 CLOG(INFO, DICOM) << "Using DCTMK version: " << DCMTK_VERSION_NUMBER;
2296
17e8e8e1ff3d log dcmtk version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2287
diff changeset
293
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
294 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
295 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
296 DictionaryLocker locker;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
297
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
298 locker->clear();
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
299
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
300 CLOG(INFO, DICOM) << "Loading the embedded dictionaries";
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
301 /**
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
302 * Do not load DICONDE dictionary, it breaks the other tags. The
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
303 * command "strace storescu 2>&1 |grep dic" shows that DICONDE
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
304 * dictionary is not loaded by storescu.
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
305 **/
4032
058b5ade8acd renaming embedded resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4030
diff changeset
306 //LoadEmbeddedDictionary(*locker, FrameworkResources::DICTIONARY_DICONDE);
058b5ade8acd renaming embedded resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4030
diff changeset
307
058b5ade8acd renaming embedded resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4030
diff changeset
308 LoadEmbeddedDictionary(*locker, FrameworkResources::DICTIONARY_DICOM);
2151
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2143
diff changeset
309
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2143
diff changeset
310 if (loadPrivateDictionary)
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2143
diff changeset
311 {
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
312 CLOG(INFO, DICOM) << "Loading the embedded dictionary of private tags";
4032
058b5ade8acd renaming embedded resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4030
diff changeset
313 LoadEmbeddedDictionary(*locker, FrameworkResources::DICTIONARY_PRIVATE);
2151
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2143
diff changeset
314 }
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2143
diff changeset
315 else
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2143
diff changeset
316 {
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
317 CLOG(INFO, DICOM) << "The dictionary of private tags has not been loaded";
2151
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2143
diff changeset
318 }
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
319 }
3302
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
320 #else
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
321 {
3302
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
322 std::vector<std::string> dictionaries;
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
323
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
324 const char* env = std::getenv(DCM_DICT_ENVIRONMENT_VARIABLE);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
325 if (env != NULL)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
326 {
3302
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
327 // This mimics the behavior of DCMTK:
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
328 // https://support.dcmtk.org/docs/file_envvars.html
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
329 #if defined(_WIN32)
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
330 Toolbox::TokenizeString(dictionaries, std::string(env), ';');
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
331 #else
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
332 Toolbox::TokenizeString(dictionaries, std::string(env), ':');
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
333 #endif
2151
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2143
diff changeset
334 }
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2143
diff changeset
335 else
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2143
diff changeset
336 {
3302
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
337 boost::filesystem::path base = DCMTK_DICTIONARY_DIR;
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
338 dictionaries.push_back((base / "dicom.dic").string());
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
339
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
340 if (loadPrivateDictionary)
3302
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
341 {
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
342 dictionaries.push_back((base / "private.dic").string());
3302
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
343 }
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
344 }
8ed445e94486 Fix issue #126 (Orthanc and DCMDICTPATH)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
345
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
346 LoadExternalDictionaries(dictionaries);
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
347 hasExternalDictionaries_ = false; // Fix the side-effect of "LoadExternalDictionaries()"
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
348 }
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
349 #endif
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
350
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
351 /* make sure data dictionary is loaded */
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
352 if (!dcmDataDict.isDictionaryLoaded())
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
353 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
354 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
355 "No DICOM dictionary loaded, check environment variable: " +
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
356 std::string(DCM_DICT_ENVIRONMENT_VARIABLE));
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
357 }
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
358
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
359 {
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
360 // Test the dictionary with a simple DICOM tag
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
361 DcmTag key(0x0010, 0x1030); // This is PatientWeight
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
362 if (key.getEVR() != EVR_DS)
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
363 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
364 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
365 "The DICOM dictionary has not been correctly read");
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
366 }
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
367 }
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
368 }
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
369
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
370
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
371 void FromDcmtkBridge::LoadExternalDictionaries(const std::vector<std::string>& dictionaries)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
372 {
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
373 DictionaryLocker locker;
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
374
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
375 CLOG(INFO, DICOM) << "Clearing the DICOM dictionary";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
376 locker->clear();
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
377
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
378 for (size_t i = 0; i < dictionaries.size(); i++)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
379 {
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
380 LOG(WARNING) << "Loading external DICOM dictionary: \"" << dictionaries[i] << "\"";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
381
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
382 if (!locker->loadDictionary(dictionaries[i].c_str()))
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
383 {
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
384 throw OrthancException(ErrorCode_InexistentFile);
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
385 }
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
386 }
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
387
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
388 hasExternalDictionaries_ = true;
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
389 }
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
390
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
391
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
392 void FromDcmtkBridge::RegisterDictionaryTag(const DicomTag& tag,
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
393 ValueRepresentation vr,
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
394 const std::string& name,
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
395 unsigned int minMultiplicity,
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
396 unsigned int maxMultiplicity,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
397 const std::string& privateCreator)
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
398 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
399 if (minMultiplicity < 1)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
400 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
401 throw OrthancException(ErrorCode_ParameterOutOfRange);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
402 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
403
1765
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
404 bool arbitrary = false;
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
405 if (maxMultiplicity == 0)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
406 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
407 maxMultiplicity = DcmVariableVM;
1765
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
408 arbitrary = true;
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
409 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
410 else if (maxMultiplicity < minMultiplicity)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
411 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
412 throw OrthancException(ErrorCode_ParameterOutOfRange);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
413 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
414
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
415 DcmEVR evr = ToDcmtkBridge::Convert(vr);
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
416
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
417 CLOG(INFO, DICOM) << "Registering tag in dictionary: (" << tag.Format() << ") "
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
418 << (DcmVR(evr).getValidVRName()) << " "
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
419 << name << " (multiplicity: " << minMultiplicity << "-"
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
420 << (arbitrary ? "n" : boost::lexical_cast<std::string>(maxMultiplicity)) << ")";
1765
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
421
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3708
diff changeset
422 std::unique_ptr<DcmDictEntry> entry;
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
423 if (privateCreator.empty())
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
424 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
425 if (tag.GetGroup() % 2 == 1)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
426 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
427 char buf[128];
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
428 sprintf(buf, "Warning: You are registering a private tag (%04x,%04x), "
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
429 "but no private creator was associated with it",
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
430 tag.GetGroup(), tag.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
431 LOG(WARNING) << buf;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
432 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
433
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
434 entry.reset(new DcmDictEntry(tag.GetGroup(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
435 tag.GetElement(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
436 evr, name.c_str(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
437 static_cast<int>(minMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
438 static_cast<int>(maxMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
439 NULL /* version */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
440 OFTrue /* doCopyString */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
441 NULL /* private creator */));
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
442 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
443 else
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
444 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
445 // "Private Data Elements have an odd Group Number that is not
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
446 // (0001,eeee), (0003,eeee), (0005,eeee), (0007,eeee), or
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
447 // (FFFF,eeee)."
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
448 if (tag.GetGroup() % 2 == 0 /* even */ ||
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
449 tag.GetGroup() == 0x0001 ||
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
450 tag.GetGroup() == 0x0003 ||
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
451 tag.GetGroup() == 0x0005 ||
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
452 tag.GetGroup() == 0x0007 ||
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
453 tag.GetGroup() == 0xffff)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
454 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
455 char buf[128];
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
456 sprintf(buf, "Trying to register private tag (%04x,%04x), but it must have an odd group >= 0x0009",
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
457 tag.GetGroup(), tag.GetElement());
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
458 throw OrthancException(ErrorCode_ParameterOutOfRange, std::string(buf));
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
459 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
460
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
461 entry.reset(new DcmDictEntry(tag.GetGroup(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
462 tag.GetElement(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
463 evr, name.c_str(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
464 static_cast<int>(minMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
465 static_cast<int>(maxMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
466 "private" /* version */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
467 OFTrue /* doCopyString */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
468 privateCreator.c_str()));
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
469 }
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
470
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
471 entry->setGroupRangeRestriction(DcmDictRange_Unspecified);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
472 entry->setElementRangeRestriction(DcmDictRange_Unspecified);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
473
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
474 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
475 DictionaryLocker locker;
2116
2fabd1073728 prevent registering two tags with the same symbolic name
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
476
4695
651f069c7f77 fix error if overriding existing tag in the DICOM dictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4690
diff changeset
477 if (locker->findEntry(DcmTagKey(tag.GetGroup(), tag.GetElement()),
651f069c7f77 fix error if overriding existing tag in the DICOM dictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4690
diff changeset
478 privateCreator.empty() ? NULL : privateCreator.c_str()))
2116
2fabd1073728 prevent registering two tags with the same symbolic name
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
479 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
480 throw OrthancException(ErrorCode_AlreadyExistingTag,
4695
651f069c7f77 fix error if overriding existing tag in the DICOM dictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4690
diff changeset
481 "Cannot register twice the tag (" + tag.Format() +
651f069c7f77 fix error if overriding existing tag in the DICOM dictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4690
diff changeset
482 "), whose symbolic name is \"" + name + "\"");
2116
2fabd1073728 prevent registering two tags with the same symbolic name
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
483 }
4695
651f069c7f77 fix error if overriding existing tag in the DICOM dictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4690
diff changeset
484 else
651f069c7f77 fix error if overriding existing tag in the DICOM dictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4690
diff changeset
485 {
651f069c7f77 fix error if overriding existing tag in the DICOM dictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4690
diff changeset
486 locker->addEntry(entry.release());
651f069c7f77 fix error if overriding existing tag in the DICOM dictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4690
diff changeset
487 }
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
488 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
489 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
490
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
491
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
492 Encoding FromDcmtkBridge::DetectEncoding(bool& hasCodeExtensions,
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
493 DcmItem& dataset,
1928
84c7eaeb5244 Configuration::GetDefaultEncoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1927
diff changeset
494 Encoding defaultEncoding)
956
2fd5a163776d primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 949
diff changeset
495 {
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
496 // http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_C.12.html#sect_C.12.1.1.2
957
63973b76a51f detection of encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 956
diff changeset
497
63973b76a51f detection of encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 956
diff changeset
498 OFString tmp;
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
499 if (dataset.findAndGetOFStringArray(DCM_SpecificCharacterSet, tmp).good())
957
63973b76a51f detection of encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 956
diff changeset
500 {
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
501 std::vector<std::string> tokens;
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
502 Toolbox::TokenizeString(tokens, std::string(tmp.c_str()), '\\');
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
503
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
504 hasCodeExtensions = (tokens.size() > 1);
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
505
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
506 for (size_t i = 0; i < tokens.size(); i++)
957
63973b76a51f detection of encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 956
diff changeset
507 {
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
508 std::string characterSet = Toolbox::StripSpaces(tokens[i]);
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
509
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
510 if (!characterSet.empty())
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
511 {
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
512 Encoding encoding;
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
513
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
514 if (GetDicomEncoding(encoding, characterSet.c_str()))
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
515 {
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
516 // The specific character set is supported by the Orthanc core
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
517 return encoding;
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
518 }
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
519 else
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
520 {
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
521 LOG(WARNING) << "Value of Specific Character Set (0008,0005) is not supported: " << characterSet
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
522 << ", fallback to ASCII (remove all special characters)";
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
523 return Encoding_Ascii;
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
524 }
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
525 }
957
63973b76a51f detection of encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 956
diff changeset
526 }
63973b76a51f detection of encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 956
diff changeset
527 }
1090
e494ceb8d763 support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1087
diff changeset
528 else
e494ceb8d763 support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1087
diff changeset
529 {
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
530 hasCodeExtensions = false;
1090
e494ceb8d763 support more encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1087
diff changeset
531 }
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
532
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
533 // No specific character set tag: Use the default encoding
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
534 return defaultEncoding;
956
2fd5a163776d primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 949
diff changeset
535 }
2fd5a163776d primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 949
diff changeset
536
2fd5a163776d primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 949
diff changeset
537
4297
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
538 Encoding FromDcmtkBridge::DetectEncoding(DcmItem &dataset,
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
539 Encoding defaultEncoding)
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
540 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
541 bool hasCodeExtensions; // ignored
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
542 return DetectEncoding(hasCodeExtensions, dataset, defaultEncoding);
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
543 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
544
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
545
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
546 void FromDcmtkBridge::ExtractDicomSummary(DicomMap& target,
2125
b9bd52c72ba2 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2116
diff changeset
547 DcmItem& dataset,
b9bd52c72ba2 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2116
diff changeset
548 unsigned int maxStringLength,
3577
33cfcc74d1b1 argument "ignoreTagLength" to ParsedDicomFile::ExtractDicomSummary()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3448
diff changeset
549 const std::set<DicomTag>& ignoreTagLength)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
550 {
4137
6774605d4341 keep only one signature for FromDcmtkBridge::ExtractDicomSummary()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4136
diff changeset
551 const Encoding defaultEncoding = GetDefaultDicomEncoding();
6774605d4341 keep only one signature for FromDcmtkBridge::ExtractDicomSummary()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4136
diff changeset
552
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
553 bool hasCodeExtensions;
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
554 Encoding encoding = DetectEncoding(hasCodeExtensions, dataset, defaultEncoding);
956
2fd5a163776d primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 949
diff changeset
555
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
556 target.Clear();
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
557 for (unsigned long i = 0; i < dataset.card(); i++)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
558 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
559 DcmElement* element = dataset.getElement(i);
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
560 if (element && element->isLeaf())
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
561 {
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
562 target.SetValueInternal(element->getTag().getGTag(),
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
563 element->getTag().getETag(),
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
564 ConvertLeafElement(*element, DicomToJsonFlags_Default,
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
565 maxStringLength, encoding, hasCodeExtensions, ignoreTagLength));
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
566 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
567 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
568 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
569
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
570
991
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 957
diff changeset
571 DicomTag FromDcmtkBridge::Convert(const DcmTag& tag)
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 957
diff changeset
572 {
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 957
diff changeset
573 return DicomTag(tag.getGTag(), tag.getETag());
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 957
diff changeset
574 }
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 957
diff changeset
575
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 957
diff changeset
576
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
577 DicomTag FromDcmtkBridge::GetTag(const DcmElement& element)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
578 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
579 return DicomTag(element.getGTag(), element.getETag());
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
580 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
581
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
582
4527
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
583 static DicomValue* CreateValueFromUtf8String(const DicomTag& tag,
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
584 const std::string& utf8,
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
585 unsigned int maxStringLength,
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
586 const std::set<DicomTag>& ignoreTagLength)
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
587 {
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
588 if (maxStringLength != 0 &&
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
589 utf8.size() > maxStringLength &&
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
590 ignoreTagLength.find(tag) == ignoreTagLength.end())
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
591 {
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
592 return new DicomValue; // Too long, create a NULL value
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
593 }
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
594 else
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
595 {
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
596 return new DicomValue(utf8, false);
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
597 }
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
598 }
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
599
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
600
956
2fd5a163776d primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 949
diff changeset
601 DicomValue* FromDcmtkBridge::ConvertLeafElement(DcmElement& element,
1736
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
602 DicomToJsonFlags flags,
1929
cda5b0ab4ce5 ORTHANC_MAXIMUM_TAG_LENGTH made explicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1928
diff changeset
603 unsigned int maxStringLength,
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
604 Encoding encoding,
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
605 bool hasCodeExtensions,
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
606 const std::set<DicomTag>& ignoreTagLength)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
607 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
608 if (!element.isLeaf())
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
609 {
1582
bd1889029cbb encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1557
diff changeset
610 // This function is only applicable to leaf elements
bd1889029cbb encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1557
diff changeset
611 throw OrthancException(ErrorCode_BadParameterType);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
612 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
613
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
614 {
4527
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
615 char *c = NULL;
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
616 if (element.isaString() &&
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
617 element.getString(c).good())
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
618 {
4527
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
619 if (c == NULL) // This case corresponds to the empty string
1854
e2c3d752ee1a prevent too long tags to be inserted
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1831
diff changeset
620 {
4527
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
621 return new DicomValue("", false);
1854
e2c3d752ee1a prevent too long tags to be inserted
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1831
diff changeset
622 }
e2c3d752ee1a prevent too long tags to be inserted
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1831
diff changeset
623 else
e2c3d752ee1a prevent too long tags to be inserted
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1831
diff changeset
624 {
4527
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
625 const std::string s(c);
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
626 const std::string utf8 = Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions);
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
627 return CreateValueFromUtf8String(GetTag(element), utf8, maxStringLength, ignoreTagLength);
1854
e2c3d752ee1a prevent too long tags to be inserted
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1831
diff changeset
628 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
629 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
630 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
631
2129
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
632
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
633 if (element.getVR() == EVR_UN)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
634 {
4527
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
635 /**
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
636 * Unknown value representation: Lookup in the dictionary. This
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
637 * is notably the case for private tags registered with the
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
638 * "Dictionary" configuration option, or for public tags with
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
639 * "EVR_UN" in the case of Little Endian Implicit transfer
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
640 * syntax (cf. DICOM CP 246).
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
641 * ftp://medical.nema.org/medical/dicom/final/cp246_ft.pdf
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
642 **/
2129
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
643 DictionaryLocker locker;
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
644
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
645 const DcmDictEntry* entry = locker->findEntry(element.getTag().getXTag(),
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
646 element.getTag().getPrivateCreator());
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
647 if (entry != NULL &&
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
648 entry->getVR().isaString())
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
649 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
650 Uint8* data = NULL;
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
651
4527
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
652 if (element.getUint8Array(data) == EC_Normal)
2129
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
653 {
4527
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
654 Uint32 length = element.getLength();
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
655
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
656 if (data == NULL ||
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
657 length == 0)
2129
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
658 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
659 return new DicomValue("", false); // Empty string
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
660 }
4527
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
661
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
662 // Remove the trailing padding, if any
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
663 if (length > 0 &&
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
664 length % 2 == 0 &&
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
665 data[length - 1] == '\0')
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
666 {
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
667 length = length - 1;
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
668 }
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
669
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
670 if (element.getTag().isPrivate())
2129
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
671 {
4527
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
672 // For private tags, we do not try and convert to UTF-8,
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
673 // as nothing ensures that the encoding of the private tag
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
674 // is the same as that of the remaining of the DICOM
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
675 // dataset. Only go for ASCII strings.
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
676 if (Toolbox::IsAsciiString(data, length))
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
677 {
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
678 const std::string s(reinterpret_cast<const char*>(data), length);
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
679 return CreateValueFromUtf8String(GetTag(element), s, maxStringLength, ignoreTagLength);
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
680 }
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
681 else
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
682 {
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
683 // Not a plain ASCII string: Consider it as a binary
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
684 // value that is handled in the switch-case below
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
685 }
2129
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
686 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
687 else
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
688 {
4527
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
689 // For public tags, convert to UTF-8 by using the
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
690 // "SpecificCharacterSet" tag, if present. This branch is
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
691 // new in Orthanc 1.9.1 (cf. DICOM CP 246).
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
692 const std::string s(reinterpret_cast<const char*>(data), length);
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
693 const std::string utf8 = Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions);
31f940334496 Handle public tags with "UN" value representation and containing a string (cf. DICOM CP 246)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4516
diff changeset
694 return CreateValueFromUtf8String(GetTag(element), utf8, maxStringLength, ignoreTagLength);
2129
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
695 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
696 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
697 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
698 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
699
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
700
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
701 try
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
702 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
703 // http://support.dcmtk.org/docs/dcvr_8h-source.html
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
704 switch (element.getVR())
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
705 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
706
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
707 /**
1738
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
708 * Deal with binary data (including PixelData).
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
709 **/
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
710
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
711 case EVR_OB: // other byte
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
712 case EVR_OF: // other float
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
713 case EVR_OW: // other word
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
714 case EVR_UN: // unknown value representation
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1738
diff changeset
715 case EVR_ox: // OB or OW depending on context
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
716 case EVR_DS: // decimal string
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
717 case EVR_IS: // integer string
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
718 case EVR_AS: // age string
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
719 case EVR_DA: // date string
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
720 case EVR_DT: // date time string
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
721 case EVR_TM: // time string
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
722 case EVR_AE: // application entity title
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
723 case EVR_CS: // code string
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
724 case EVR_SH: // short string
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
725 case EVR_LO: // long string
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
726 case EVR_ST: // short text
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
727 case EVR_LT: // long text
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
728 case EVR_UT: // unlimited text
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
729 case EVR_PN: // person name
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
730 case EVR_UI: // unique identifier
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
731 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
732 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
733 {
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
734 if (!(flags & DicomToJsonFlags_ConvertBinaryToNull))
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
735 {
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
736 Uint8* data = NULL;
4845
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
737 Uint16* data16 = NULL;
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
738 if (element.getUint8Array(data) == EC_Normal)
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
739 {
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
740 return new DicomValue(reinterpret_cast<const char*>(data), element.getLength(), true);
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
741 }
4845
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
742 else if (element.getUint16Array(data16) == EC_Normal)
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
743 {
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
744 return new DicomValue(reinterpret_cast<const char*>(data16), element.getLength(), true);
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
745 }
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
746 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
747
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
748 return new DicomValue;
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
749 }
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
750
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
751 /**
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
752 * Numeric types
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
753 **/
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
754
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
755 case EVR_SL: // signed long
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
756 {
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
757 return ApplyDcmtkToCTypeConverter<DcmtkToSint32Converter>(element);
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
758 }
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
759
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
760 case EVR_SS: // signed short
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
761 {
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
762 return ApplyDcmtkToCTypeConverter<DcmtkToSint16Converter>(element);
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
763 }
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
764
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
765 case EVR_UL: // unsigned long
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
766 {
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
767 return ApplyDcmtkToCTypeConverter<DcmtkToUint32Converter>(element);
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
768 }
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
769
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
770 case EVR_US: // unsigned short
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
771 {
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
772 return ApplyDcmtkToCTypeConverter<DcmtkToUint16Converter>(element);
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
773 }
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
774
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
775 case EVR_FL: // float single-precision
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
776 {
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
777 return ApplyDcmtkToCTypeConverter<DcmtkToFloat32Converter>(element);
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
778 }
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
779
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
780 case EVR_FD: // float double-precision
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
781 {
2554
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string
am@osimis.io
parents: 2528
diff changeset
782 return ApplyDcmtkToCTypeConverter<DcmtkToFloat64Converter>(element);
1131
ac6bd50a8c83 fix issue 16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1093
diff changeset
783 }
ac6bd50a8c83 fix issue 16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1093
diff changeset
784
ac6bd50a8c83 fix issue 16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1093
diff changeset
785
ac6bd50a8c83 fix issue 16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1093
diff changeset
786 /**
ac6bd50a8c83 fix issue 16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1093
diff changeset
787 * Attribute tag.
ac6bd50a8c83 fix issue 16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1093
diff changeset
788 **/
ac6bd50a8c83 fix issue 16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1093
diff changeset
789
ac6bd50a8c83 fix issue 16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1093
diff changeset
790 case EVR_AT:
ac6bd50a8c83 fix issue 16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1093
diff changeset
791 {
1147
ae9a83a6fa47 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1131
diff changeset
792 DcmTagKey tag;
ae9a83a6fa47 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1131
diff changeset
793 if (dynamic_cast<DcmAttributeTag&>(element).getTagVal(tag, 0).good())
ae9a83a6fa47 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1131
diff changeset
794 {
ae9a83a6fa47 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1131
diff changeset
795 DicomTag t(tag.getGroup(), tag.getElement());
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
796 return new DicomValue(t.Format(), false);
1147
ae9a83a6fa47 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1131
diff changeset
797 }
1131
ac6bd50a8c83 fix issue 16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1093
diff changeset
798 else
1147
ae9a83a6fa47 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1131
diff changeset
799 {
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
800 return new DicomValue;
1147
ae9a83a6fa47 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1131
diff changeset
801 }
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
802 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
803
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
804
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
805 /**
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
806 * Sequence types, should never occur at this point because of
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
807 * "element.isLeaf()".
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
808 **/
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
809
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
810 case EVR_SQ: // sequence of items
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
811 return new DicomValue;
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
812
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
813
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
814 /**
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
815 * Internal to DCMTK.
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
816 **/
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
817
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
818 case EVR_xs: // SS or US depending on context
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
819 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
820 case EVR_na: // na="not applicable", for data which has no VR
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
821 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
822 case EVR_item: // used internally for items
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
823 case EVR_metainfo: // used internally for meta info datasets
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
824 case EVR_dataset: // used internally for datasets
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
825 case EVR_fileFormat: // used internally for DICOM files
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
826 case EVR_dicomDir: // used internally for DICOMDIR objects
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
827 case EVR_dirRecord: // used internally for DICOMDIR records
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
828 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
829 case EVR_pixelItem: // used internally for pixel items in a compressed image
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
830 case EVR_PixelData: // used internally for uncompressed pixeld data
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
831 case EVR_OverlayData: // used internally for overlay data
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
832 return new DicomValue;
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
833
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
834
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
835 /**
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
836 * Default case.
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
837 **/
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
838
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
839 default:
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
840 return new DicomValue;
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
841 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
842 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
843 catch (boost::bad_lexical_cast&)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
844 {
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
845 return new DicomValue;
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
846 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
847 catch (std::bad_cast&)
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
848 {
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
849 return new DicomValue;
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
850 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
851 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
852
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
853
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
854 static Json::Value& PrepareNode(Json::Value& parent,
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
855 DcmElement& element,
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
856 DicomToJsonFormat format)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
857 {
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
858 assert(parent.type() == Json::objectValue);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
859
35
f6d12037f886 full json vs. simplified json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
860 DicomTag tag(FromDcmtkBridge::GetTag(element));
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
861 const std::string formattedTag = tag.Format();
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
862
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
863 if (format == DicomToJsonFormat_Short)
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
864 {
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
865 parent[formattedTag] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
866 return parent[formattedTag];
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
867 }
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
868
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
869 // This code gives access to the name of the private tags
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
870 std::string tagName = FromDcmtkBridge::GetTagName(element);
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
871
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
872 switch (format)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
873 {
1860
c7d70f659190 DicomToJsonFormat_Simple -> DicomToJsonFormat_Human
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1854
diff changeset
874 case DicomToJsonFormat_Human:
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
875 parent[tagName] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
876 return parent[tagName];
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
877
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
878 case DicomToJsonFormat_Full:
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
879 {
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
880 parent[formattedTag] = Json::objectValue;
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
881 Json::Value& node = parent[formattedTag];
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
882
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
883 if (element.isLeaf())
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
884 {
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
885 node["Name"] = tagName;
35
f6d12037f886 full json vs. simplified json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
886
2076
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2074
diff changeset
887 if (element.getTag().getPrivateCreator() != NULL)
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
888 {
2076
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2074
diff changeset
889 node["PrivateCreator"] = element.getTag().getPrivateCreator();
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
890 }
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
891
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
892 return node;
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
893 }
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
894 else
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
895 {
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
896 node["Name"] = tagName;
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
897 node["Type"] = "Sequence";
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
898 node["Value"] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
899 return node["Value"];
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
900 }
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
901 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
902
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
903 default:
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
904 throw OrthancException(ErrorCode_ParameterOutOfRange);
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
905 }
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
906 }
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
907
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
908
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
909 static void LeafValueToJson(Json::Value& target,
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
910 const DicomValue& value,
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
911 DicomToJsonFormat format,
1738
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
912 DicomToJsonFlags flags,
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
913 unsigned int maxStringLength)
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
914 {
1738
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
915 Json::Value* targetValue = NULL;
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
916 Json::Value* targetType = NULL;
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
917
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
918 switch (format)
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
919 {
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
920 case DicomToJsonFormat_Short:
1860
c7d70f659190 DicomToJsonFormat_Simple -> DicomToJsonFormat_Human
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1854
diff changeset
921 case DicomToJsonFormat_Human:
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
922 {
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
923 assert(target.type() == Json::nullValue);
1738
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
924 targetValue = &target;
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
925 break;
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
926 }
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
927
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
928 case DicomToJsonFormat_Full:
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
929 {
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
930 assert(target.type() == Json::objectValue);
1738
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
931 target["Value"] = Json::nullValue;
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
932 target["Type"] = Json::nullValue;
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
933 targetType = &target["Type"];
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
934 targetValue = &target["Value"];
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
935 break;
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
936 }
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
937
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
938 default:
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
939 throw OrthancException(ErrorCode_ParameterOutOfRange);
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
940 }
1738
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
941
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
942 assert(targetValue != NULL);
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
943 assert(targetValue->type() == Json::nullValue);
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
944 assert(targetType == NULL || targetType->type() == Json::nullValue);
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
945
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
946 if (value.IsNull())
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
947 {
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
948 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
949 {
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
950 *targetType = "Null";
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
951 }
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
952 }
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
953 else if (value.IsBinary())
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
954 {
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
955 if (flags & DicomToJsonFlags_ConvertBinaryToAscii)
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
956 {
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
957 *targetValue = Toolbox::ConvertToAscii(value.GetContent());
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
958 }
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
959 else
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
960 {
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
961 std::string s;
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
962 value.FormatDataUriScheme(s);
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
963 *targetValue = s;
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
964 }
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
965
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
966 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
967 {
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
968 *targetType = "Binary";
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
969 }
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
970 }
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
971 else if (maxStringLength == 0 ||
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
972 value.GetContent().size() <= maxStringLength)
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
973 {
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
974 *targetValue = value.GetContent();
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
975
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
976 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
977 {
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
978 *targetType = "String";
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
979 }
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
980 }
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
981 else
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
982 {
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
983 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
984 {
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
985 *targetType = "TooLong";
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
986 }
15a788a63846 DicomToJsonFlags_IncludeBinary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
987 }
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
988 }
35
f6d12037f886 full json vs. simplified json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
989
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
990
2126
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
991 void FromDcmtkBridge::ElementToJson(Json::Value& parent,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
992 DcmElement& element,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
993 DicomToJsonFormat format,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
994 DicomToJsonFlags flags,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
995 unsigned int maxStringLength,
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
996 Encoding encoding,
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
997 bool hasCodeExtensions,
4514
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
998 const std::set<DicomTag>& ignoreTagLength,
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
999 unsigned int depth)
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
1000 {
1691
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1690
diff changeset
1001 if (parent.type() == Json::nullValue)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1690
diff changeset
1002 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1690
diff changeset
1003 parent = Json::objectValue;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1690
diff changeset
1004 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1690
diff changeset
1005
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1690
diff changeset
1006 assert(parent.type() == Json::objectValue);
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
1007 Json::Value& target = PrepareNode(parent, element, format);
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
1008
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
1009 if (element.isLeaf())
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
1010 {
2129
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
1011 // The "0" below lets "LeafValueToJson()" take care of "TooLong" values
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3708
diff changeset
1012 std::unique_ptr<DicomValue> v(FromDcmtkBridge::ConvertLeafElement
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1013 (element, flags, 0, encoding, hasCodeExtensions, ignoreTagLength));
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1014
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1015 if (ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1016 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1017 LeafValueToJson(target, *v, format, flags, maxStringLength);
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1018 }
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1019 else
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1020 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1021 LeafValueToJson(target, *v, format, flags, 0);
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1022 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1023 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1024 else
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1025 {
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
1026 assert(target.type() == Json::nullValue);
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
1027 target = Json::arrayValue;
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1028
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1029 // "All subclasses of DcmElement except for DcmSequenceOfItems
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1030 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
1031 // etc. are not." The following dynamic_cast is thus OK.
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1032 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element);
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1033
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1034 for (unsigned long i = 0; i < sequence.card(); i++)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1035 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1036 DcmItem* child = sequence.getItem(i);
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
1037 Json::Value& v = target.append(Json::objectValue);
4514
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1038 DatasetToJson(v, *child, format, flags, maxStringLength, encoding, hasCodeExtensions,
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1039 ignoreTagLength, depth + 1);
1687
4d80fc990dae refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
1040 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1041 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1042 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1043
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1044
2126
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1045 void FromDcmtkBridge::DatasetToJson(Json::Value& parent,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1046 DcmItem& item,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1047 DicomToJsonFormat format,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1048 DicomToJsonFlags flags,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1049 unsigned int maxStringLength,
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1050 Encoding encoding,
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
1051 bool hasCodeExtensions,
4514
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1052 const std::set<DicomTag>& ignoreTagLength,
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1053 unsigned int depth)
1686
14a32b2fa63e refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1657
diff changeset
1054 {
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
1055 assert(parent.type() == Json::objectValue);
1686
14a32b2fa63e refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1657
diff changeset
1056
14a32b2fa63e refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1657
diff changeset
1057 for (unsigned long i = 0; i < item.card(); i++)
14a32b2fa63e refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1657
diff changeset
1058 {
14a32b2fa63e refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1657
diff changeset
1059 DcmElement* element = item.getElement(i);
1735
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
1060 if (element == NULL)
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
1061 {
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
1062 throw OrthancException(ErrorCode_InternalError);
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
1063 }
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
1064
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
1065 DicomTag tag(FromDcmtkBridge::Convert(element->getTag()));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
1066
4514
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1067 // New flag in Orthanc 1.9.1
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1068 if (depth == 0 &&
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1069 (flags & DicomToJsonFlags_StopAfterPixelData) &&
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1070 tag > DICOM_TAG_PIXEL_DATA)
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1071 {
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1072 continue;
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1073 }
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1074
4516
671ee7c1fd46 added DicomToJsonFlags_SkipGroupLengths
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4515
diff changeset
1075 // New flag in Orthanc 1.9.1
671ee7c1fd46 added DicomToJsonFlags_SkipGroupLengths
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4515
diff changeset
1076 if ((flags & DicomToJsonFlags_SkipGroupLengths) &&
671ee7c1fd46 added DicomToJsonFlags_SkipGroupLengths
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4515
diff changeset
1077 tag.GetElement() == 0x0000)
671ee7c1fd46 added DicomToJsonFlags_SkipGroupLengths
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4515
diff changeset
1078 {
671ee7c1fd46 added DicomToJsonFlags_SkipGroupLengths
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4515
diff changeset
1079 continue;
671ee7c1fd46 added DicomToJsonFlags_SkipGroupLengths
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4515
diff changeset
1080 }
671ee7c1fd46 added DicomToJsonFlags_SkipGroupLengths
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4515
diff changeset
1081
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
1082 /*element->getTag().isPrivate()*/
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
1083 if (tag.IsPrivate() &&
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
1084 !(flags & DicomToJsonFlags_IncludePrivateTags))
1736
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
1085 {
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
1086 continue;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
1087 }
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
1088
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
1089 if (!(flags & DicomToJsonFlags_IncludeUnknownTags))
1735
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
1090 {
1736
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
1091 DictionaryLocker locker;
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1092 if (locker->findEntry(element->getTag(), element->getTag().getPrivateCreator()) == NULL)
1736
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
1093 {
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
1094 continue;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
1095 }
1735
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
1096 }
1736
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
1097
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1098 if (IsBinaryTag(element->getTag()))
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1738
diff changeset
1099 {
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1738
diff changeset
1100 // This is a binary tag
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1738
diff changeset
1101 if ((tag == DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludePixelData)) ||
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1738
diff changeset
1102 (tag != DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludeBinary)))
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1738
diff changeset
1103 {
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1738
diff changeset
1104 continue;
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1738
diff changeset
1105 }
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1738
diff changeset
1106 }
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1738
diff changeset
1107
4514
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1108 FromDcmtkBridge::ElementToJson(parent, *element, format, flags, maxStringLength, encoding,
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1109 hasCodeExtensions, ignoreTagLength, depth);
1686
14a32b2fa63e refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1657
diff changeset
1110 }
14a32b2fa63e refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1657
diff changeset
1111 }
14a32b2fa63e refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1657
diff changeset
1112
14a32b2fa63e refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1657
diff changeset
1113
2126
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1114 void FromDcmtkBridge::ExtractDicomAsJson(Json::Value& target,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1115 DcmDataset& dataset,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1116 DicomToJsonFormat format,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1117 DicomToJsonFlags flags,
2131
bb199bccdc45 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2129
diff changeset
1118 unsigned int maxStringLength,
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1119 const std::set<DicomTag>& ignoreTagLength)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1120 {
4140
0ddc5297a8ab centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4137
diff changeset
1121 const Encoding defaultEncoding = GetDefaultDicomEncoding();
0ddc5297a8ab centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4137
diff changeset
1122
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
1123 bool hasCodeExtensions;
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
1124 Encoding encoding = DetectEncoding(hasCodeExtensions, dataset, defaultEncoding);
2126
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1125
1688
27d70e9ee2e4 DicomToJsonFormat enumeration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1687
diff changeset
1126 target = Json::objectValue;
4514
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1127 DatasetToJson(target, dataset, format, flags, maxStringLength, encoding, hasCodeExtensions, ignoreTagLength, 0);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1128 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1129
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1130
2126
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1131 void FromDcmtkBridge::ExtractHeaderAsJson(Json::Value& target,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1132 DcmMetaInfo& dataset,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1133 DicomToJsonFormat format,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1134 DicomToJsonFlags flags,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
1135 unsigned int maxStringLength)
1831
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1818
diff changeset
1136 {
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
1137 std::set<DicomTag> ignoreTagLength;
1831
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1818
diff changeset
1138 target = Json::objectValue;
4514
5b929e6b3c36 removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1139 DatasetToJson(target, dataset, format, flags, maxStringLength, Encoding_Ascii, false, ignoreTagLength, 0);
1831
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1818
diff changeset
1140 }
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1818
diff changeset
1141
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1818
diff changeset
1142
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1143 static std::string GetTagNameInternal(DcmTag& tag)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1144 {
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1145 if (!hasExternalDictionaries_)
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
1146 {
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1147 /**
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1148 * Some patches for important tags because of different DICOM
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1149 * dictionaries between DCMTK versions. Since Orthanc 1.9.4, we
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1150 * don't apply these patches if external dictionaries are
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1151 * loaded, notably for compatibility with DICONDE. In Orthanc <=
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1152 * 1.9.3, this was done by method "DicomTag::GetMainTagsName()".
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1153 **/
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1154
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1155 DicomTag tmp(tag.getGroup(), tag.getElement());
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1156
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1157 if (tmp == DICOM_TAG_ACCESSION_NUMBER)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1158 return "AccessionNumber";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1159
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1160 if (tmp == DICOM_TAG_SOP_INSTANCE_UID)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1161 return "SOPInstanceUID";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1162
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1163 if (tmp == DICOM_TAG_PATIENT_ID)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1164 return "PatientID";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1165
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1166 if (tmp == DICOM_TAG_SERIES_INSTANCE_UID)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1167 return "SeriesInstanceUID";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1168
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1169 if (tmp == DICOM_TAG_STUDY_INSTANCE_UID)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1170 return "StudyInstanceUID";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1171
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1172 if (tmp == DICOM_TAG_PIXEL_DATA)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1173 return "PixelData";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1174
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1175 if (tmp == DICOM_TAG_IMAGE_INDEX)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1176 return "ImageIndex";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1177
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1178 if (tmp == DICOM_TAG_INSTANCE_NUMBER)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1179 return "InstanceNumber";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1180
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1181 if (tmp == DICOM_TAG_NUMBER_OF_SLICES)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1182 return "NumberOfSlices";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1183
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1184 if (tmp == DICOM_TAG_NUMBER_OF_FRAMES)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1185 return "NumberOfFrames";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1186
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1187 if (tmp == DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1188 return "CardiacNumberOfImages";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1189
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1190 if (tmp == DICOM_TAG_IMAGES_IN_ACQUISITION)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1191 return "ImagesInAcquisition";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1192
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1193 if (tmp == DICOM_TAG_PATIENT_NAME)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1194 return "PatientName";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1195
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1196 if (tmp == DICOM_TAG_IMAGE_POSITION_PATIENT)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1197 return "ImagePositionPatient";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1198
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1199 if (tmp == DICOM_TAG_IMAGE_ORIENTATION_PATIENT)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1200 return "ImageOrientationPatient";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1201
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1202 // New in Orthanc 1.6.0, as tagged as "RETIRED_" since DCMTK 3.6.4
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1203 if (tmp == DICOM_TAG_OTHER_PATIENT_IDS)
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1204 return "OtherPatientIDs";
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1205
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1206 // End of patches
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
1207 }
106
332fec038d52 patch for dcmtk dictionaries
jodogne
parents: 80
diff changeset
1208
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1209 #if 0
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1210 // This version explicitly calls the dictionary
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1211 const DcmDataDictionary& dict = dcmDataDict.rdlock();
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1212 const DcmDictEntry* entry = dict.findEntry(tag, NULL);
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1213
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1214 std::string s(DcmTag_ERROR_TagName);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1215 if (entry != NULL)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1216 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1217 s = std::string(entry->getTagName());
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1218 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1219
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1220 dcmDataDict.unlock();
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1221 return s;
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1222 #else
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1223 const char* name = tag.getTagName();
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1224 if (name == NULL)
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1225 {
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1226 return DcmTag_ERROR_TagName;
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1227 }
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1228 else
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1229 {
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1230 return std::string(name);
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1231 }
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1232 #endif
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1233 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1234
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1235
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1236 std::string FromDcmtkBridge::GetTagName(const DicomTag& t,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1237 const std::string& privateCreator)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1238 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1239 DcmTag tag(t.GetGroup(), t.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1240
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1241 if (!privateCreator.empty())
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1242 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1243 tag.setPrivateCreator(privateCreator.c_str());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1244 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1245
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1246 return GetTagNameInternal(tag);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1247 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1248
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1249
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1250 std::string FromDcmtkBridge::GetTagName(const DcmElement& element)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1251 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1252 // Copy the tag to ensure const-correctness of DcmElement. Note
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1253 // that the private creator information is also copied.
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1254 DcmTag tag(element.getTag());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1255
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1256 return GetTagNameInternal(tag);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1257 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1258
4297
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1259 std::string FromDcmtkBridge::GetTagName(const DicomElement &element)
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1260 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1261 return GetTagName(element.GetTag(), "");
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1262 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1263
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1264
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2076
diff changeset
1265
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1266 DicomTag FromDcmtkBridge::ParseTag(const char* name)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1267 {
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2554
diff changeset
1268 DicomTag parsed(0, 0);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2554
diff changeset
1269 if (DicomTag::ParseHexadecimal(parsed, name))
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1270 {
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2554
diff changeset
1271 return parsed;
1861
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1860
diff changeset
1272 }
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1860
diff changeset
1273
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1274 #if 0
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1275 const DcmDataDictionary& dict = dcmDataDict.rdlock();
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1276 const DcmDictEntry* entry = dict.findEntry(name);
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1277
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1278 if (entry == NULL)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1279 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1280 dcmDataDict.unlock();
1582
bd1889029cbb encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1557
diff changeset
1281 throw OrthancException(ErrorCode_UnknownDicomTag);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1282 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1283 else
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1284 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1285 DcmTagKey key = entry->getKey();
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1286 DicomTag tag(key.getGroup(), key.getElement());
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1287 dcmDataDict.unlock();
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1288 return tag;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1289 }
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1290 #else
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1291 DcmTag tag;
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1292 if (DcmTag::findTagFromName(name, tag).good())
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1293 {
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1294 return DicomTag(tag.getGTag(), tag.getETag());
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1295 }
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1296 else
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1297 {
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1298 CLOG(INFO, DICOM) << "Unknown DICOM tag: \"" << name << "\"";
4935
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1299 throw OrthancException(ErrorCode_UnknownDicomTag, name, false);
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1300 }
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1301 #endif
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1302 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1303
4297
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1304 DicomTag FromDcmtkBridge::ParseTag(const std::string &name)
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1305 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1306 return ParseTag(name.c_str());
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1307 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1308
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1309 bool FromDcmtkBridge::HasTag(const DicomMap &fields, const std::string &tagName)
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1310 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1311 return fields.HasTag(ParseTag(tagName));
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1312 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1313
4941
96a3e81eba90 performance warning
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
1314 void FromDcmtkBridge::FormatListOfTags(std::string& output, const std::set<DicomTag>& tags)
96a3e81eba90 performance warning
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
1315 {
96a3e81eba90 performance warning
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
1316 std::set<std::string> values;
96a3e81eba90 performance warning
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
1317 for (std::set<DicomTag>::const_iterator it = tags.begin();
96a3e81eba90 performance warning
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
1318 it != tags.end(); it++)
96a3e81eba90 performance warning
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
1319 {
96a3e81eba90 performance warning
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
1320 values.insert(it->Format());
96a3e81eba90 performance warning
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
1321 }
96a3e81eba90 performance warning
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
1322
96a3e81eba90 performance warning
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
1323 Toolbox::JoinStrings(output, values, ";");
96a3e81eba90 performance warning
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
1324 }
4935
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1325
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1326 // parses a list like "0010,0010;PatientBirthDate;0020,0020"
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1327 void FromDcmtkBridge::ParseListOfTags(std::set<DicomTag>& result, const std::string& source)
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1328 {
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1329 result.clear();
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1330
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1331 std::vector<std::string> tokens;
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1332 Toolbox::TokenizeString(tokens, source, ';');
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1333
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1334 for (std::vector<std::string>::const_iterator it = tokens.begin();
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1335 it != tokens.end(); it++)
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1336 {
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1337 if (it->size() > 0)
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1338 {
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1339 DicomTag tag = FromDcmtkBridge::ParseTag(*it);
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1340 result.insert(tag);
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1341 }
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1342 }
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1343 }
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1344
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1345
4936
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1346 void FromDcmtkBridge::ParseListOfTags(std::set<DicomTag>& result, const Json::Value& source)
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1347 {
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1348 result.clear();
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1349
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1350 if (!source.isArray())
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1351 {
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1352 throw OrthancException(ErrorCode_BadRequest, "List of tags is not an array");
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1353 }
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1354
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1355 for (Json::ArrayIndex i = 0; i < source.size(); i++)
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1356 {
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1357 const std::string& value = source[i].asString();
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1358 DicomTag tag = FromDcmtkBridge::ParseTag(value);
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1359 result.insert(tag);
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1360 }
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1361 }
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
1362
4297
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1363 const DicomValue &FromDcmtkBridge::GetValue(const DicomMap &fields,
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1364 const std::string &tagName)
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1365 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1366 return fields.GetValue(ParseTag(tagName));
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1367 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1368
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1369 void FromDcmtkBridge::SetValue(DicomMap &target,
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1370 const std::string &tagName,
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1371 DicomValue *value)
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1372 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1373 const DicomTag tag = ParseTag(tagName);
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1374 target.SetValueInternal(tag.GetGroup(), tag.GetElement(), value);
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1375 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4200
diff changeset
1376
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1377
1655
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1612
diff changeset
1378 bool FromDcmtkBridge::IsUnknownTag(const DicomTag& tag)
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1612
diff changeset
1379 {
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1612
diff changeset
1380 DcmTag tmp(tag.GetGroup(), tag.GetElement());
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1612
diff changeset
1381 return tmp.isUnknownVR();
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1612
diff changeset
1382 }
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1612
diff changeset
1383
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1612
diff changeset
1384
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1385 void FromDcmtkBridge::ToJson(Json::Value& result,
1368
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1360
diff changeset
1386 const DicomMap& values,
4697
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1387 DicomToJsonFormat format)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1388 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1389 if (result.type() != Json::objectValue)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1390 {
62
a70bb32802ae renaming Server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
1391 throw OrthancException(ErrorCode_BadParameterType);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1392 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1393
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1394 result.clear();
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1395
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1396 for (DicomMap::Content::const_iterator
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1397 it = values.content_.begin(); it != values.content_.end(); ++it)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1398 {
4697
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1399 switch (format)
1368
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1360
diff changeset
1400 {
4697
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1401 case DicomToJsonFormat_Human:
1368
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1360
diff changeset
1402 {
4697
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1403 // TODO Inject PrivateCreator if some is available in the DicomMap?
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1404 const std::string tagName = GetTagName(it->first, "");
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1405
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1406 if (it->second->IsNull())
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1407 {
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1408 result[tagName] = Json::nullValue;
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1409 }
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1410 else
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1411 {
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1412 // TODO IsBinary
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1413 result[tagName] = it->second->GetContent();
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1414 }
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1415 break;
1368
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1360
diff changeset
1416 }
4697
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1417
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1418 case DicomToJsonFormat_Full:
1368
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1360
diff changeset
1419 {
4697
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1420 // TODO Inject PrivateCreator if some is available in the DicomMap?
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1421 const std::string tagName = GetTagName(it->first, "");
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1422
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1423 Json::Value value = Json::objectValue;
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1424
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1425 value["Name"] = tagName;
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1426
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1427 if (it->second->IsNull())
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1428 {
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1429 value["Type"] = "Null";
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1430 value["Value"] = Json::nullValue;
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1431 }
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1432 else
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1433 {
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1434 // TODO IsBinary
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1435 value["Type"] = "String";
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1436 value["Value"] = it->second->GetContent();
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1437 }
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1438
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1439 result[it->first.Format()] = value;
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1440 break;
1368
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1360
diff changeset
1441 }
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1360
diff changeset
1442
4697
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1443 case DicomToJsonFormat_Short:
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1444 {
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1445 const std::string hex = it->first.Format();
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1446
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1447 if (it->second->IsNull())
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1448 {
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1449 result[hex] = Json::nullValue;
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1450 }
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1451 else
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1452 {
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1453 // TODO IsBinary
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1454 result[hex] = it->second->GetContent();
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1455 }
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1456
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1457 break;
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1458 }
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1459
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1460 default:
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4696
diff changeset
1461 throw OrthancException(ErrorCode_ParameterOutOfRange);
1368
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1360
diff changeset
1462 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1463 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1464 }
176
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1465
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1466
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 784
diff changeset
1467 std::string FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType level)
176
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1468 {
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1469 char uid[100];
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1470
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1471 switch (level)
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1472 {
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 784
diff changeset
1473 case ResourceType_Patient:
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1474 // The "PatientID" field is of type LO (Long String), 64
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1475 // Bytes Maximum. An UUID is of length 36, thus it can be used
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1476 // as a random PatientID.
2512
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2499
diff changeset
1477 return Toolbox::GenerateUuid();
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1478
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 784
diff changeset
1479 case ResourceType_Instance:
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
1480 return dcmGenerateUniqueIdentifier(uid, SITE_INSTANCE_UID_ROOT);
176
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1481
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 784
diff changeset
1482 case ResourceType_Series:
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
1483 return dcmGenerateUniqueIdentifier(uid, SITE_SERIES_UID_ROOT);
176
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1484
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 784
diff changeset
1485 case ResourceType_Study:
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
1486 return dcmGenerateUniqueIdentifier(uid, SITE_STUDY_UID_ROOT);
176
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1487
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
1488 default:
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
1489 throw OrthancException(ErrorCode_ParameterOutOfRange);
176
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1490 }
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1491 }
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1492
3748
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1493
3872
b40dfa6dc8da working on a simpler abstraction for transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3811
diff changeset
1494
3748
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1495 static bool SaveToMemoryBufferInternal(std::string& buffer,
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1496 DcmFileFormat& dicom,
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1497 E_TransferSyntax xfer)
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1498 {
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1499 E_EncodingType encodingType = /*opt_sequenceType*/ EET_ExplicitLength;
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1500
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1501 // Create a memory buffer with the proper size
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1502 {
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1503 const uint32_t estimatedSize = dicom.calcElementLength(xfer, encodingType); // (*)
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1504 buffer.resize(estimatedSize);
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1505 }
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1506
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1507 DcmOutputBufferStream ob(&buffer[0], buffer.size());
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1508
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1509 // Fill the memory buffer with the meta-header and the dataset
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1510 dicom.transferInit();
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1511 OFCondition c = dicom.write(ob, xfer, encodingType, NULL,
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1512 /*opt_groupLength*/ EGL_recalcGL,
3765
4a25727401cd first transcoding to jpeg 8bpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3748
diff changeset
1513 /*opt_paddingType*/ EPD_noChange,
4a25727401cd first transcoding to jpeg 8bpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3748
diff changeset
1514 /*padlen*/ 0, /*subPadlen*/ 0, /*instanceLength*/ 0,
4a25727401cd first transcoding to jpeg 8bpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3748
diff changeset
1515 EWM_updateMeta /* creates new SOP instance UID on lossy */);
3748
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1516 dicom.transferEnd();
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1517
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1518 if (c.good())
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1519 {
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1520 // The DICOM file is successfully written, truncate the target
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1521 // buffer if its size was overestimated by (*)
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1522 ob.flush();
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1523
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1524 size_t effectiveSize = static_cast<size_t>(ob.tell());
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1525 if (effectiveSize < buffer.size())
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1526 {
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1527 buffer.resize(effectiveSize);
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1528 }
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1529
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1530 return true;
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1531 }
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1532 else
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1533 {
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1534 // Error
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1535 buffer.clear();
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1536 return false;
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1537 }
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1538 }
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1539
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1540
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
1541 bool FromDcmtkBridge::SaveToMemoryBuffer(std::string& buffer,
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
1542 DcmDataset& dataSet)
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
1543 {
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
1544 // Determine the transfer syntax which shall be used to write the
3811
890af7156f19 fix transcoding to jpeg baseline
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3772
diff changeset
1545 // information to the file. If not possible, switch to the Little
890af7156f19 fix transcoding to jpeg baseline
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3772
diff changeset
1546 // Endian syntax, with explicit length.
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
1547
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
1548 // http://support.dcmtk.org/docs/dcxfer_8h-source.html
661
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1549
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1550
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1551 /**
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1552 * Note that up to Orthanc 0.7.1 (inclusive), the
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1553 * "EXS_LittleEndianExplicit" was always used to save the DICOM
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1554 * dataset into memory. We now keep the original transfer syntax
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1555 * (if available).
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1556 **/
3883
795c9ca5eb91 DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3882
diff changeset
1557 E_TransferSyntax xfer = dataSet.getCurrentXfer();
661
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1558 if (xfer == EXS_Unknown)
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1559 {
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1560 // No information about the original transfer syntax: This is
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1561 // most probably a DICOM dataset that was read from memory.
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1562 xfer = EXS_LittleEndianExplicit;
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1563 }
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1564
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1565 // Create the meta-header information
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
1566 DcmFileFormat ff(&dataSet);
661
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 656
diff changeset
1567 ff.validateMetaInfo(xfer);
1316
1c8dfedefefe Fix anonymization generating non-portable DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1307
diff changeset
1568 ff.removeInvalidGroups();
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
1569
3748
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1570 return SaveToMemoryBufferInternal(buffer, ff, xfer);
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1571 }
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1572
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1573
3872
b40dfa6dc8da working on a simpler abstraction for transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3811
diff changeset
1574 bool FromDcmtkBridge::Transcode(DcmFileFormat& dicom,
3748
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1575 DicomTransferSyntax syntax,
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1576 const DcmRepresentationParameter* representation)
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1577 {
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1578 E_TransferSyntax xfer;
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1579 if (!LookupDcmtkTransferSyntax(xfer, syntax))
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1580 {
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1581 throw OrthancException(ErrorCode_InternalError);
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1582 }
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
1583 else
3885
e23026566536 removed unused functions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3883
diff changeset
1584 {
e23026566536 removed unused functions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3883
diff changeset
1585 DicomTransferSyntax sourceSyntax;
e23026566536 removed unused functions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3883
diff changeset
1586 bool known = LookupOrthancTransferSyntax(sourceSyntax, dicom);
3922
74eeadf5d51d fix access to compressed frames after transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3896
diff changeset
1587
74eeadf5d51d fix access to compressed frames after transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3896
diff changeset
1588 if (!dicom.chooseRepresentation(xfer, representation).good() ||
74eeadf5d51d fix access to compressed frames after transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3896
diff changeset
1589 !dicom.canWriteXfer(xfer) ||
3811
890af7156f19 fix transcoding to jpeg baseline
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3772
diff changeset
1590 !dicom.validateMetaInfo(xfer, EWM_updateMeta).good())
890af7156f19 fix transcoding to jpeg baseline
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3772
diff changeset
1591 {
890af7156f19 fix transcoding to jpeg baseline
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3772
diff changeset
1592 return false;
890af7156f19 fix transcoding to jpeg baseline
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3772
diff changeset
1593 }
3872
b40dfa6dc8da working on a simpler abstraction for transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3811
diff changeset
1594 else
b40dfa6dc8da working on a simpler abstraction for transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3811
diff changeset
1595 {
b40dfa6dc8da working on a simpler abstraction for transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3811
diff changeset
1596 dicom.removeInvalidGroups();
3883
795c9ca5eb91 DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3882
diff changeset
1597
3885
e23026566536 removed unused functions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3883
diff changeset
1598 if (known)
3883
795c9ca5eb91 DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3882
diff changeset
1599 {
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1600 CLOG(INFO, DICOM) << "Transcoded an image from transfer syntax "
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1601 << GetTransferSyntaxUid(sourceSyntax) << " to "
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1602 << GetTransferSyntaxUid(syntax);
3883
795c9ca5eb91 DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3882
diff changeset
1603 }
795c9ca5eb91 DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3882
diff changeset
1604 else
795c9ca5eb91 DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3882
diff changeset
1605 {
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1606 CLOG(INFO, DICOM) << "Transcoded an image from unknown transfer syntax to "
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1607 << GetTransferSyntaxUid(syntax);
3883
795c9ca5eb91 DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3882
diff changeset
1608 }
795c9ca5eb91 DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3882
diff changeset
1609
3872
b40dfa6dc8da working on a simpler abstraction for transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3811
diff changeset
1610 return true;
b40dfa6dc8da working on a simpler abstraction for transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3811
diff changeset
1611 }
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
1612 }
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
1613 }
1360
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1316
diff changeset
1614
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1316
diff changeset
1615
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1616 ValueRepresentation FromDcmtkBridge::LookupValueRepresentation(const DicomTag& tag)
1360
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1316
diff changeset
1617 {
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1316
diff changeset
1618 DcmTag t(tag.GetGroup(), tag.GetElement());
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1619 return Convert(t.getEVR());
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1620 }
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1621
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1622 ValueRepresentation FromDcmtkBridge::Convert(const DcmEVR vr)
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1623 {
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1624 switch (vr)
1417
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1625 {
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1626 case EVR_AE:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1627 return ValueRepresentation_ApplicationEntity;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1628
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1629 case EVR_AS:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1630 return ValueRepresentation_AgeString;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1631
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1632 case EVR_AT:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1633 return ValueRepresentation_AttributeTag;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1634
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1635 case EVR_CS:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1636 return ValueRepresentation_CodeString;
1417
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1637
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1638 case EVR_DA:
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1639 return ValueRepresentation_Date;
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1640
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1641 case EVR_DS:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1642 return ValueRepresentation_DecimalString;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1643
1417
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1644 case EVR_DT:
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1645 return ValueRepresentation_DateTime;
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1646
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1647 case EVR_FL:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1648 return ValueRepresentation_FloatingPointSingle;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1649
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1650 case EVR_FD:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1651 return ValueRepresentation_FloatingPointDouble;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1652
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1653 case EVR_IS:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1654 return ValueRepresentation_IntegerString;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1655
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1656 case EVR_LO:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1657 return ValueRepresentation_LongString;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1658
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1659 case EVR_LT:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1660 return ValueRepresentation_LongText;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1661
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1662 case EVR_OB:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1663 return ValueRepresentation_OtherByte;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1664
3199
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1665 #if DCMTK_VERSION_NUMBER >= 361
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1666 case EVR_OD:
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1667 return ValueRepresentation_OtherDouble;
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
1668 #endif
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1669
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1670 case EVR_OF:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1671 return ValueRepresentation_OtherFloat;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1672
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
1673 #if DCMTK_VERSION_NUMBER >= 362
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1674 case EVR_OL:
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1675 return ValueRepresentation_OtherLong;
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
1676 #endif
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1677
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1678 case EVR_OW:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1679 return ValueRepresentation_OtherWord;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1680
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1681 case EVR_PN:
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
1682 return ValueRepresentation_PersonName;
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1683
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1684 case EVR_SH:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1685 return ValueRepresentation_ShortString;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1686
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1687 case EVR_SL:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1688 return ValueRepresentation_SignedLong;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1689
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1690 case EVR_SQ:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1691 return ValueRepresentation_Sequence;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1692
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1693 case EVR_SS:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1694 return ValueRepresentation_SignedShort;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1695
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1696 case EVR_ST:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1697 return ValueRepresentation_ShortText;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1698
1417
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1699 case EVR_TM:
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1700 return ValueRepresentation_Time;
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1701
3199
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1702 #if DCMTK_VERSION_NUMBER >= 361
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
1703 case EVR_UC:
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
1704 return ValueRepresentation_UnlimitedCharacters;
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
1705 #endif
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1706
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1707 case EVR_UI:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1708 return ValueRepresentation_UniqueIdentifier;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1709
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1710 case EVR_UL:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1711 return ValueRepresentation_UnsignedLong;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1712
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1713 case EVR_UN:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1714 return ValueRepresentation_Unknown;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1715
3199
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1716 #if DCMTK_VERSION_NUMBER >= 361
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
1717 case EVR_UR:
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
1718 return ValueRepresentation_UniversalResource;
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
1719 #endif
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1720
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1721 case EVR_US:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1722 return ValueRepresentation_UnsignedShort;
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1723
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1724 case EVR_UT:
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1725 return ValueRepresentation_UnlimitedText;
1792
b769623c806c safety check
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1765
diff changeset
1726
1417
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1727 default:
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
1728 return ValueRepresentation_NotSupported;
1417
8e23f16a198d fix issues 35 and 37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
1729 }
1360
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1316
diff changeset
1730 }
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1316
diff changeset
1731
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1732
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1733 DcmElement* FromDcmtkBridge::CreateElementForTag(const DicomTag& tag,
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1734 const std::string& privateCreator)
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1691
diff changeset
1735 {
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1736 if (tag.IsPrivate() &&
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1737 privateCreator.empty())
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1691
diff changeset
1738 {
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1739 // This solves issue 140 (Modifying private tags with REST API
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1740 // changes VR from LO to UN)
4476
c1f36fd13730 migrate remaining links to issues in bitbucket to mercurial server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1741 // https://bugs.orthanc-server.com/show_bug.cgi?id=140
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1742 LOG(WARNING) << "Private creator should not be empty while creating a private tag: " << tag.Format();
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1691
diff changeset
1743 }
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1744
3692
fd302ec6a502 fix for ubuntu 16.04
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
1745 #if DCMTK_VERSION_NUMBER >= 362
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1746 DcmTag key(tag.GetGroup(), tag.GetElement());
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1747 if (tag.IsPrivate())
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1748 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1749 return DcmItem::newDicomElement(key, privateCreator.c_str());
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1750 }
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1751 else
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1752 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1753 return DcmItem::newDicomElement(key, NULL);
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1754 }
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1755
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1756 #else
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1757 DcmTag key(tag.GetGroup(), tag.GetElement());
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1758 if (tag.IsPrivate())
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1759 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1760 // https://forum.dcmtk.org/viewtopic.php?t=4527
3708
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3692
diff changeset
1761 LOG(WARNING) << "You are using DCMTK <= 3.6.1: All the private tags "
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1762 "are considered as having a binary value representation";
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1763 key.setPrivateCreator(privateCreator.c_str());
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1764 return new DcmOtherByteOtherWord(key);
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1765 }
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1766 else
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1767 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1768 return newDicomElement(key);
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1769 }
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1770 #endif
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1771 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1772
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1773
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1774
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1775 void FromDcmtkBridge::FillElementWithString(DcmElement& element,
1695
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1694
diff changeset
1776 const std::string& utf8Value,
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
1777 bool decodeDataUriScheme,
1695
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1694
diff changeset
1778 Encoding dicomEncoding)
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1779 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1780 std::string binary;
1695
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1694
diff changeset
1781 const std::string* decoded = &utf8Value;
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1782
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
1783 if (decodeDataUriScheme &&
2905
ae20fccdd867 refactoring mime types
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2831
diff changeset
1784 boost::starts_with(utf8Value, URI_SCHEME_PREFIX_BINARY))
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1785 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1786 std::string mime;
1981
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1976
diff changeset
1787 if (!Toolbox::DecodeDataUriScheme(mime, binary, utf8Value))
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1976
diff changeset
1788 {
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1976
diff changeset
1789 throw OrthancException(ErrorCode_BadFileFormat);
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1976
diff changeset
1790 }
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1976
diff changeset
1791
1695
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1694
diff changeset
1792 decoded = &binary;
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1694
diff changeset
1793 }
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1694
diff changeset
1794 else if (dicomEncoding != Encoding_Utf8)
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1694
diff changeset
1795 {
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1694
diff changeset
1796 binary = Toolbox::ConvertFromUtf8(utf8Value, dicomEncoding);
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1797 decoded = &binary;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1798 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1799
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1800 if (IsBinaryTag(element.getTag()))
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1801 {
3199
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1802 bool ok;
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1803
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1804 switch (element.getTag().getEVR())
3199
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1805 {
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1806 case EVR_OW:
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1807 if (decoded->size() % sizeof(Uint16) != 0)
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1808 {
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1809 LOG(ERROR) << "A tag with OW VR must have an even number of bytes";
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1810 ok = false;
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1811 }
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1812 else
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1813 {
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1814 ok = element.putUint16Array((const Uint16*) decoded->c_str(), decoded->size() / sizeof(Uint16)).good();
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1815 }
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1816
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1817 break;
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1818
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1819 default:
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1820 ok = element.putUint8Array((const Uint8*) decoded->c_str(), decoded->size()).good();
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1821 break;
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1822 }
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1823
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1824 if (ok)
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1825 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1826 return;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1827 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1828 else
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1829 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1830 throw OrthancException(ErrorCode_InternalError);
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1831 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1832 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1833
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1834 bool ok = false;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1835
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1836 try
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1837 {
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1838 switch (element.getTag().getEVR())
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1839 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1840 // http://support.dcmtk.org/docs/dcvr_8h-source.html
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1841
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1842 /**
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1843 * TODO.
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1844 **/
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1845
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1846 case EVR_OB: // other byte
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1847 case EVR_OW: // other word
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1848 throw OrthancException(ErrorCode_NotImplemented);
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1849
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1850 case EVR_UN: // unknown value representation
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1851 throw OrthancException(ErrorCode_ParameterOutOfRange);
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1852
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1853
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1854 /**
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1855 * String types.
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
1856 **/
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1857
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1858 case EVR_DS: // decimal string
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1859 case EVR_IS: // integer string
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1860 case EVR_AS: // age string
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1861 case EVR_DA: // date string
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1862 case EVR_DT: // date time string
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1863 case EVR_TM: // time string
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1864 case EVR_AE: // application entity title
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1865 case EVR_CS: // code string
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1866 case EVR_SH: // short string
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1867 case EVR_LO: // long string
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1868 case EVR_ST: // short text
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1869 case EVR_LT: // long text
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1870 case EVR_UT: // unlimited text
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1871 case EVR_PN: // person name
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1872 case EVR_UI: // unique identifier
3209
f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3199
diff changeset
1873 #if DCMTK_VERSION_NUMBER >= 361
3199
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1874 case EVR_UC: // unlimited characters
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
1875 case EVR_UR: // URI/URL
3209
f6374c36a671 documentation of DICOMweb in SDK, compatibility with DCMTK 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3199
diff changeset
1876 #endif
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1877 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1878 ok = element.putString(decoded->c_str()).good();
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1879 break;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1880 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1881
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1882
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1883 /**
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1884 * Numerical types
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1885 **/
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1886
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1887 case EVR_SL: // signed long
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1888 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1889 ok = element.putSint32(boost::lexical_cast<Sint32>(*decoded)).good();
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1890 break;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1891 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1892
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1893 case EVR_SS: // signed short
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1894 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1895 ok = element.putSint16(boost::lexical_cast<Sint16>(*decoded)).good();
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1896 break;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1897 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1898
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1899 case EVR_UL: // unsigned long
3692
fd302ec6a502 fix for ubuntu 16.04
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
1900 #if DCMTK_VERSION_NUMBER >= 362
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1901 case EVR_OL: // other long (requires byte-swapping)
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1902 #endif
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1903 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1904 ok = element.putUint32(boost::lexical_cast<Uint32>(*decoded)).good();
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1905 break;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1906 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1907
4845
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1908 case EVR_xs: // unsigned short, signed short or multiple values
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1909 {
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1910 if (decoded->find('\\') != std::string::npos)
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1911 {
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1912 ok = element.putString(decoded->c_str()).good();
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1913 }
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1914 else if (decoded->find('-') != std::string::npos)
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1915 {
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1916 ok = element.putSint16(boost::lexical_cast<Sint16>(*decoded)).good();
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1917 }
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1918 else
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1919 {
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1920 ok = element.putUint16(boost::lexical_cast<Uint16>(*decoded)).good();
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1921 }
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1922 break;
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1923 }
02d77189d8ba added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents: 4831
diff changeset
1924
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1925 case EVR_US: // unsigned short
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1926 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1927 ok = element.putUint16(boost::lexical_cast<Uint16>(*decoded)).good();
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1928 break;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1929 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1930
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1931 case EVR_FL: // float single-precision
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1932 case EVR_OF: // other float (requires byte swapping)
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1933 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1934 ok = element.putFloat32(boost::lexical_cast<float>(*decoded)).good();
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1935 break;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1936 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1937
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1938 case EVR_FD: // float double-precision
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1939 #if DCMTK_VERSION_NUMBER >= 361
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1940 case EVR_OD: // other double (requires byte-swapping)
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
1941 #endif
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1942 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1943 ok = element.putFloat64(boost::lexical_cast<double>(*decoded)).good();
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1944 break;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1945 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1946
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1947
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1948 /**
4663
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1949 * Other types
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1950 **/
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1951
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1952 case EVR_AT: // attribute tag, new in Orthanc 1.9.4
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1953 {
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1954 DicomTag value = ParseTag(utf8Value);
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1955 ok = element.putTagVal(DcmTagKey(value.GetGroup(), value.GetElement())).good();
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1956 break;
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1957 }
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1958
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1959
72af097bb92b "Replace" tags in "/modify" and "/anonymize" now supports value representation AT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4528
diff changeset
1960 /**
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1961 * Sequence types, should never occur at this point.
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1962 **/
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1963
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1964 case EVR_SQ: // sequence of items
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1965 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1966 ok = false;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1967 break;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1968 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1969
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1970
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1971 /**
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1972 * Internal to DCMTK.
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1973 **/
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1974
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1975 case EVR_ox: // OB or OW depending on context
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1976 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1977 case EVR_na: // na="not applicable", for data which has no VR
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1978 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1979 case EVR_item: // used internally for items
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1980 case EVR_metainfo: // used internally for meta info datasets
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1981 case EVR_dataset: // used internally for datasets
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1982 case EVR_fileFormat: // used internally for DICOM files
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1983 case EVR_dicomDir: // used internally for DICOMDIR objects
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1984 case EVR_dirRecord: // used internally for DICOMDIR records
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1985 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1986 case EVR_pixelItem: // used internally for pixel items in a compressed image
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1987 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1988 case EVR_PixelData: // used internally for uncompressed pixeld data
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1989 case EVR_OverlayData: // used internally for overlay data
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1990 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1991 default:
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1992 break;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1993 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1994 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1995 catch (boost::bad_lexical_cast&)
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1996 {
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1997 ok = false;
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1998 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
1999
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2000 if (!ok)
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2001 {
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2002 DicomTag tag(element.getTag().getGroup(), element.getTag().getElement());
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
2003 throw OrthancException(ErrorCode_BadFileFormat,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
2004 "While creating a DICOM instance, tag (" + tag.Format() +
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
2005 ") has out-of-range value: \"" + (*decoded) + "\"");
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2006 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2007 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2008
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2009
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1691
diff changeset
2010 DcmElement* FromDcmtkBridge::FromJson(const DicomTag& tag,
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1691
diff changeset
2011 const Json::Value& value,
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1792
diff changeset
2012 bool decodeDataUriScheme,
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2013 Encoding dicomEncoding,
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2014 const std::string& privateCreator)
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2015 {
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3708
diff changeset
2016 std::unique_ptr<DcmElement> element;
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2017
1690
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2018 switch (value.type())
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2019 {
1690
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2020 case Json::stringValue:
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2021 element.reset(CreateElementForTag(tag, privateCreator));
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2022 FillElementWithString(*element, value.asString(), decodeDataUriScheme, dicomEncoding);
1690
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2023 break;
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2024
2216
9a8fab016145 sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
2025 case Json::nullValue:
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2026 element.reset(CreateElementForTag(tag, privateCreator));
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2027 FillElementWithString(*element, "", decodeDataUriScheme, dicomEncoding);
2216
9a8fab016145 sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
2028 break;
9a8fab016145 sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
2029
1690
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2030 case Json::arrayValue:
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2031 {
4007
884b55ce01f6 Private tags returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3922
diff changeset
2032 const char* p = NULL;
4016
c675d77b82ab fix creation of sequence in private tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4007
diff changeset
2033 if (tag.IsPrivate() &&
c675d77b82ab fix creation of sequence in private tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4007
diff changeset
2034 !privateCreator.empty())
4007
884b55ce01f6 Private tags returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3922
diff changeset
2035 {
884b55ce01f6 Private tags returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3922
diff changeset
2036 p = privateCreator.c_str();
884b55ce01f6 Private tags returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3922
diff changeset
2037 }
884b55ce01f6 Private tags returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3922
diff changeset
2038
884b55ce01f6 Private tags returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3922
diff changeset
2039 DcmTag key(tag.GetGroup(), tag.GetElement(), p);
1690
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2040 if (key.getEVR() != EVR_SQ)
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2041 {
4007
884b55ce01f6 Private tags returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3922
diff changeset
2042 throw OrthancException(ErrorCode_BadParameterType,
884b55ce01f6 Private tags returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3922
diff changeset
2043 "Bad Parameter type for tag " + tag.Format());
1690
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2044 }
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2045
2287
9f3414878c02 Fix Debian #865606 (orthanc FTBFS with libdcmtk-dev 3.6.1~20170228-2)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2275
diff changeset
2046 DcmSequenceOfItems* sequence = new DcmSequenceOfItems(key);
1690
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2047 element.reset(sequence);
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2048
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2049 for (Json::Value::ArrayIndex i = 0; i < value.size(); i++)
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2050 {
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3708
diff changeset
2051 std::unique_ptr<DcmItem> item(new DcmItem);
1690
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2052
2830
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2053 switch (value[i].type())
1690
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2054 {
2830
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2055 case Json::objectValue:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2056 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2057 Json::Value::Members members = value[i].getMemberNames();
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2058 for (Json::Value::ArrayIndex j = 0; j < members.size(); j++)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2059 {
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2060 item->insert(FromJson(ParseTag(members[j]), value[i][members[j]], decodeDataUriScheme, dicomEncoding, privateCreator));
2830
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2061 }
2831
b51233f03e7e missing break
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2830
diff changeset
2062 break;
2830
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2063 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2064
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2065 case Json::arrayValue:
2831
b51233f03e7e missing break
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2830
diff changeset
2066 {
2830
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2067 // Lua cannot disambiguate between an empty dictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2068 // and an empty array
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2069 if (value[i].size() != 0)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2070 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2071 throw OrthancException(ErrorCode_BadParameterType);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2072 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2073 break;
2831
b51233f03e7e missing break
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2830
diff changeset
2074 }
2830
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2075
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2076 default:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
2077 throw OrthancException(ErrorCode_BadParameterType);
1690
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2078 }
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2079
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2080 sequence->append(item.release());
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2081 }
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2082
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2083 break;
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2084 }
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2085
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1689
diff changeset
2086 default:
3895
37cf1889667a more explicit error message
Alain Mazy <alain@mazy.be>
parents: 3811
diff changeset
2087 throw OrthancException(ErrorCode_BadParameterType, "Bad Parameter type for tag " + tag.Format());
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2088 }
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2089
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2090 return element.release();
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1688
diff changeset
2091 }
1765
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
2092
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
2093
1924
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2094 DcmPixelSequence* FromDcmtkBridge::GetPixelSequence(DcmDataset& dataset)
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2095 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2096 DcmElement *element = NULL;
1927
b60f27664b8f simplification in FromDcmtkBridge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1924
diff changeset
2097 if (!dataset.findAndGetElement(DCM_PixelData, element).good())
1924
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2098 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2099 throw OrthancException(ErrorCode_BadFileFormat);
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2100 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2101
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2102 DcmPixelData& pixelData = dynamic_cast<DcmPixelData&>(*element);
3922
74eeadf5d51d fix access to compressed frames after transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3896
diff changeset
2103
74eeadf5d51d fix access to compressed frames after transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3896
diff changeset
2104 E_TransferSyntax repType;
74eeadf5d51d fix access to compressed frames after transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3896
diff changeset
2105 const DcmRepresentationParameter *repParam = NULL;
74eeadf5d51d fix access to compressed frames after transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3896
diff changeset
2106 pixelData.getCurrentRepresentationKey(repType, repParam);
74eeadf5d51d fix access to compressed frames after transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3896
diff changeset
2107
1924
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2108 DcmPixelSequence* pixelSequence = NULL;
3922
74eeadf5d51d fix access to compressed frames after transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3896
diff changeset
2109 if (!pixelData.getEncapsulatedRepresentation(repType, repParam, pixelSequence).good())
1924
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2110 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2111 return NULL;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2112 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2113 else
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2114 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2115 return pixelSequence;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2116 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
2117 }
1934
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2118
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2119
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2120 Encoding FromDcmtkBridge::ExtractEncoding(const Json::Value& json,
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2121 Encoding defaultEncoding)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2122 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2123 if (json.type() != Json::objectValue)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2124 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2125 throw OrthancException(ErrorCode_BadParameterType);
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2126 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2127
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2128 Encoding encoding = defaultEncoding;
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2129
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2130 const Json::Value::Members tags = json.getMemberNames();
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2131
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2132 // Look for SpecificCharacterSet (0008,0005) in the JSON file
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2133 for (size_t i = 0; i < tags.size(); i++)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2134 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2135 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]);
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2136 if (tag == DICOM_TAG_SPECIFIC_CHARACTER_SET)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2137 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2138 const Json::Value& value = json[tags[i]];
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2139 if (value.type() != Json::stringValue ||
2216
9a8fab016145 sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
2140 (value.asString().length() != 0 &&
9a8fab016145 sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
2141 !GetDicomEncoding(encoding, value.asCString())))
1934
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2142 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
2143 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
2144 "Unknown encoding while creating DICOM from JSON: " +
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
2145 value.toStyledString());
1934
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2146 }
2216
9a8fab016145 sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
2147
9a8fab016145 sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
2148 if (value.asString().length() == 0)
9a8fab016145 sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
2149 {
9a8fab016145 sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
2150 return defaultEncoding;
9a8fab016145 sample worklist plugin fine-tuning the C-Find query
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
2151 }
1934
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2152 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2153 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2154
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2155 return encoding;
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2156 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2157
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2158
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2159 static void SetString(DcmDataset& target,
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2160 const DcmTag& tag,
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2161 const std::string& value)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2162 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2163 if (!target.putAndInsertString(tag, value.c_str()).good())
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2164 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2165 throw OrthancException(ErrorCode_InternalError);
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2166 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2167 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2168
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2169
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2170 DcmDataset* FromDcmtkBridge::FromJson(const Json::Value& json, // Encoded using UTF-8
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2171 bool generateIdentifiers,
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2172 bool decodeDataUriScheme,
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2173 Encoding defaultEncoding,
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2174 const std::string& privateCreator)
1934
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2175 {
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3708
diff changeset
2176 std::unique_ptr<DcmDataset> result(new DcmDataset);
1934
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2177 Encoding encoding = ExtractEncoding(json, defaultEncoding);
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2178
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2179 SetString(*result, DCM_SpecificCharacterSet, GetDicomSpecificCharacterSet(encoding));
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2180
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2181 const Json::Value::Members tags = json.getMemberNames();
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2182
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2183 bool hasPatientId = false;
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2184 bool hasStudyInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2185 bool hasSeriesInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2186 bool hasSopInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2187
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2188 for (size_t i = 0; i < tags.size(); i++)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2189 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2190 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]);
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2191 const Json::Value& value = json[tags[i]];
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2192
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2193 if (tag == DICOM_TAG_PATIENT_ID)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2194 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2195 hasPatientId = true;
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2196 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2197 else if (tag == DICOM_TAG_STUDY_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2198 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2199 hasStudyInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2200 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2201 else if (tag == DICOM_TAG_SERIES_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2202 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2203 hasSeriesInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2204 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2205 else if (tag == DICOM_TAG_SOP_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2206 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2207 hasSopInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2208 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2209
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2210 if (tag != DICOM_TAG_SPECIFIC_CHARACTER_SET)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2211 {
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3708
diff changeset
2212 std::unique_ptr<DcmElement> element(FromDcmtkBridge::FromJson(tag, value, decodeDataUriScheme, encoding, privateCreator));
4200
7112a8af0b63 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4140
diff changeset
2213
7112a8af0b63 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4140
diff changeset
2214 result->findAndDeleteElement(element->getTag());
1934
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2215
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2216 DcmElement* tmp = element.release();
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2217 if (!result->insert(tmp, false, false).good())
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2218 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2219 delete tmp;
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2220 throw OrthancException(ErrorCode_InternalError);
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2221 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2222 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2223 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2224
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2225 if (!hasPatientId &&
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2226 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2227 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2228 SetString(*result, DCM_PatientID, GenerateUniqueIdentifier(ResourceType_Patient));
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2229 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2230
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2231 if (!hasStudyInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2232 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2233 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2234 SetString(*result, DCM_StudyInstanceUID, GenerateUniqueIdentifier(ResourceType_Study));
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2235 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2236
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2237 if (!hasSeriesInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2238 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2239 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2240 SetString(*result, DCM_SeriesInstanceUID, GenerateUniqueIdentifier(ResourceType_Series));
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2241 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2242
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2243 if (!hasSopInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2244 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2245 {
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2246 SetString(*result, DCM_SOPInstanceUID, GenerateUniqueIdentifier(ResourceType_Instance));
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2247 }
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2248
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2249 return result.release();
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1930
diff changeset
2250 }
1935
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2251
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2252
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2253 DcmFileFormat* FromDcmtkBridge::LoadFromMemoryBuffer(const void* buffer,
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2254 size_t size)
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2255 {
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2256 DcmInputBufferStream is;
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2257 if (size > 0)
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2258 {
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2259 is.setBuffer(buffer, size);
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2260 }
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2261 is.setEos();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2262
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3708
diff changeset
2263 std::unique_ptr<DcmFileFormat> result(new DcmFileFormat);
1935
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2264
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2265 result->transferInit();
3771
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3769
diff changeset
2266
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3769
diff changeset
2267 /**
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3769
diff changeset
2268 * New in Orthanc 1.6.0: The "size" is given as an argument to the
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3769
diff changeset
2269 * "read()" method. This can avoid huge memory consumption if
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3769
diff changeset
2270 * parsing an invalid DICOM file, which can notably been observed
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3769
diff changeset
2271 * by executing the integration test "test_upload_compressed" on
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3769
diff changeset
2272 * valgrind running Orthanc.
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3769
diff changeset
2273 **/
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3769
diff changeset
2274 if (!result->read(is, EXS_Unknown, EGL_noChange, size).good())
1935
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2275 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
2276 throw OrthancException(ErrorCode_BadFileFormat,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
2277 "Cannot parse an invalid DICOM file (size: " +
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
2278 boost::lexical_cast<std::string>(size) + " bytes)");
1935
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2279 }
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2280
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2281 result->loadAllDataIntoMemory();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2282 result->transferEnd();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2283
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2284 return result.release();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
2285 }
1998
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2286
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2287
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2288 void FromDcmtkBridge::FromJson(DicomMap& target,
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2289 const Json::Value& source)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2290 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2291 if (source.type() != Json::objectValue)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2292 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2293 throw OrthancException(ErrorCode_BadFileFormat);
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2294 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2295
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2296 target.Clear();
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2297
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2298 Json::Value::Members members = source.getMemberNames();
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2299
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2300 for (size_t i = 0; i < members.size(); i++)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2301 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2302 const Json::Value& value = source[members[i]];
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2303
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2304 if (value.type() != Json::stringValue)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2305 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2306 throw OrthancException(ErrorCode_BadFileFormat);
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2307 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2308
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
2309 target.SetValue(ParseTag(members[i]), value.asString(), false);
1998
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2310 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
2311 }
2207
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2312
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2313
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2314 void FromDcmtkBridge::ChangeStringEncoding(DcmItem& dataset,
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2315 Encoding source,
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2316 bool hasSourceCodeExtensions,
2207
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2317 Encoding target)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2318 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2319 // Recursive exploration of a dataset to change the encoding of
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2320 // each string-like element
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2321
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2322 if (source == target)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2323 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2324 return;
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2325 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2326
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2327 for (unsigned long i = 0; i < dataset.card(); i++)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2328 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2329 DcmElement* element = dataset.getElement(i);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2330 if (element)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2331 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2332 if (element->isLeaf())
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2333 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2334 char *c = NULL;
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2335 if (element->isaString() &&
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2336 element->getString(c).good() &&
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2337 c != NULL)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2338 {
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2339 std::string a = Toolbox::ConvertToUtf8(c, source, hasSourceCodeExtensions);
2207
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2340 std::string b = Toolbox::ConvertFromUtf8(a, target);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2341 element->putString(b.c_str());
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2342 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2343 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2344 else
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2345 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2346 // "All subclasses of DcmElement except for DcmSequenceOfItems
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2347 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2348 // etc. are not." The following dynamic_cast is thus OK.
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2349 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(*element);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2350
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2351 for (unsigned long j = 0; j < sequence.card(); j++)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2352 {
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2353 ChangeStringEncoding(*sequence.getItem(j), source, hasSourceCodeExtensions, target);
2207
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2354 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2355 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2356 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2357 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2172
diff changeset
2358 }
2209
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2207
diff changeset
2359
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2207
diff changeset
2360
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2361 void FromDcmtkBridge::InitializeCodecs()
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2362 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2363 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
2364 CLOG(INFO, DICOM) << "Registering JPEG Lossless codecs in DCMTK";
3727
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2365 DJLSDecoderRegistration::registerCodecs();
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2366 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2367 DJLSEncoderRegistration::registerCodecs();
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2368 # endif
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2369 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2370
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2371 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
2372 CLOG(INFO, DICOM) << "Registering JPEG codecs in DCMTK";
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2373 DJDecoderRegistration::registerCodecs();
3727
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2374 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2375 DJEncoderRegistration::registerCodecs();
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2376 # endif
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2377 #endif
3748
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
2378
4696
dd6274412ff4 new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4695
diff changeset
2379 CLOG(INFO, DICOM) << "Registering RLE codecs in DCMTK";
3748
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
2380 DcmRLEDecoderRegistration::registerCodecs();
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
2381 #if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
2382 DcmRLEEncoderRegistration::registerCodecs();
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
2383 #endif
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2384 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2385
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2386
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2387 void FromDcmtkBridge::FinalizeCodecs()
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2388 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2389 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2390 // Unregister JPEG-LS codecs
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2391 DJLSDecoderRegistration::cleanup();
3727
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2392 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2393 DJLSEncoderRegistration::cleanup();
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2394 # endif
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2395 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2396
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2397 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2398 // Unregister JPEG codecs
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2399 DJDecoderRegistration::cleanup();
3727
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2400 # if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
3743
33c19a6643e1 creating IDicomTranscoder abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3730
diff changeset
2401 DJEncoderRegistration::cleanup();
3727
090022f1b5e1 auto-generation of primitives to handle transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
2402 # endif
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2403 #endif
3748
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
2404
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
2405 DcmRLEDecoderRegistration::cleanup();
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
2406 #if ORTHANC_ENABLE_DCMTK_TRANSCODING == 1
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
2407 DcmRLEEncoderRegistration::cleanup();
ca36e3f1112c transcoding to uncompressed transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3743
diff changeset
2408 #endif
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2364
diff changeset
2409 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2410
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2411
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2412
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2413 // Forward declaration
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2414 static bool ApplyVisitorToElement(DcmElement& element,
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2415 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2416 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2417 const std::vector<size_t>& parentIndexes,
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2418 Encoding encoding,
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2419 bool hasCodeExtensions);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2420
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2421 static void ApplyVisitorToDataset(DcmItem& dataset,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2422 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2423 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2424 const std::vector<size_t>& parentIndexes,
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2425 Encoding encoding,
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2426 bool hasCodeExtensions)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2427 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2428 assert(parentTags.size() == parentIndexes.size());
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2429
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2430 std::set<DcmTagKey> toRemove;
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2431
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2432 for (unsigned long i = 0; i < dataset.card(); i++)
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2433 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2434 DcmElement* element = dataset.getElement(i);
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2435 if (element == NULL)
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2436 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2437 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2438 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2439 else
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2440 {
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2441 if (!ApplyVisitorToElement(*element, visitor, parentTags, parentIndexes, encoding, hasCodeExtensions))
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2442 {
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2443 toRemove.insert(element->getTag());
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2444 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2445 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2446 }
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2447
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2448 // Remove all the tags that were planned for removal (cf. ITagVisitor::Action_Remove)
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2449 for (std::set<DcmTagKey>::const_iterator
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2450 it = toRemove.begin(); it != toRemove.end(); ++it)
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2451 {
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2452 std::unique_ptr<DcmElement> tmp(dataset.remove(*it));
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2453 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2454 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2455
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2456
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2457 // Returns "true" iff the element must be kept. If "false" is
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2458 // returned, the element will be removed.
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2459 static bool ApplyVisitorToLeaf(DcmElement& element,
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2460 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2461 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2462 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2463 const DicomTag& tag,
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2464 Encoding encoding,
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2465 bool hasCodeExtensions)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2466 {
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2467 // TODO - Merge this function, that is more recent, with ConvertLeafElement()
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2468
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2469 assert(element.isLeaf());
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2470
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2471 DcmEVR evr = element.getTag().getEVR();
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2472
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2473
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2474 /**
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2475 * Fix the EVR for types internal to DCMTK
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2476 **/
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2477
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2478 if (evr == EVR_ox) // OB or OW depending on context
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2479 {
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2480 evr = EVR_OB;
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2481 }
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2482
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2483 if (evr == EVR_UNKNOWN || // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2484 evr == EVR_UNKNOWN2B) // used internally for elements with unknown VR with 2-byte length field in explicit VR
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2485 {
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2486 evr = EVR_UN;
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2487 }
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2488
4737
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2489 if (evr == EVR_UN)
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2490 {
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2491 // New in Orthanc 1.9.5
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2492 DictionaryLocker locker;
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2493
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2494 const DcmDictEntry* entry = locker->findEntry(element.getTag().getXTag(),
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2495 element.getTag().getPrivateCreator());
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2496
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2497 if (entry != NULL)
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2498 {
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2499 evr = entry->getEVR();
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2500 }
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2501 }
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2502
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2503 const ValueRepresentation vr = FromDcmtkBridge::Convert(evr);
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2504
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2505
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2506 /**
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2507 * Deal with binary data (including PixelData).
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2508 **/
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2509
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2510 if (evr == EVR_OB || // other byte
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2511 evr == EVR_OW || // other word
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2512 evr == EVR_UN) // unknown value representation
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2513 {
3199
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
2514 Uint16* data16 = NULL;
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2515 Uint8* data = NULL;
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2516
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2517 ITagVisitor::Action action;
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2518
4528
93a51d228d80 fix segmentation fault during anonymization on big-endian architectures
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4527
diff changeset
2519 if ((element.getTag() == DCM_PixelData || // (*) New in Orthanc 1.9.1
93a51d228d80 fix segmentation fault during anonymization on big-endian architectures
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4527
diff changeset
2520 evr == EVR_OW) &&
3199
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
2521 element.getUint16Array(data16) == EC_Normal)
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
2522 {
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2523 action = visitor.VisitBinary(parentTags, parentIndexes, tag, vr, data16, element.getLength());
3199
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
2524 }
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
2525 else if (evr != EVR_OW &&
9316f341e40f unit testing json for dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3198
diff changeset
2526 element.getUint8Array(data) == EC_Normal)
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2527 {
4528
93a51d228d80 fix segmentation fault during anonymization on big-endian architectures
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4527
diff changeset
2528 /**
93a51d228d80 fix segmentation fault during anonymization on big-endian architectures
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4527
diff changeset
2529 * WARNING: The call to "getUint8Array()" crashes
93a51d228d80 fix segmentation fault during anonymization on big-endian architectures
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4527
diff changeset
2530 * (segmentation fault) on big-endian architectures if applied
93a51d228d80 fix segmentation fault during anonymization on big-endian architectures
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4527
diff changeset
2531 * to pixel data, during the call to "swapIfNecessary()" in
93a51d228d80 fix segmentation fault during anonymization on big-endian architectures
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4527
diff changeset
2532 * "DcmPolymorphOBOW::getUint8Array()" (this method is not
93a51d228d80 fix segmentation fault during anonymization on big-endian architectures
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4527
diff changeset
2533 * reimplemented in derived class "DcmPixelData"). However,
93a51d228d80 fix segmentation fault during anonymization on big-endian architectures
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4527
diff changeset
2534 * "getUint16Array()" works correctly, hence (*).
93a51d228d80 fix segmentation fault during anonymization on big-endian architectures
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4527
diff changeset
2535 **/
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2536 action = visitor.VisitBinary(parentTags, parentIndexes, tag, vr, data, element.getLength());
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2537 }
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2538 else
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2539 {
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2540 action = visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr);
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2541 }
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2542
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2543 switch (action)
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2544 {
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2545 case ITagVisitor::Action_None:
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2546 return true; // We're done
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2547
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2548 case ITagVisitor::Action_Remove:
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2549 return false;
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2550
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2551 case ITagVisitor::Action_Replace:
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2552 throw OrthancException(ErrorCode_NotImplemented, "Iterator cannot replace binary data");
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2553
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2554 default:
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2555 throw OrthancException(ErrorCode_ParameterOutOfRange);
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2556 }
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2557 }
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2558
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2559
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2560 /**
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2561 * Deal with plain strings (and convert them to UTF-8)
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2562 **/
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2563
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2564 char *c = NULL;
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2565 if (element.isaString() &&
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2566 element.getString(c).good())
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2567 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2568 std::string utf8;
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2569
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2570 if (c != NULL) // This case corresponds to the empty string
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2571 {
3448
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3302
diff changeset
2572 if (element.getTag() == DCM_SpecificCharacterSet)
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3302
diff changeset
2573 {
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3302
diff changeset
2574 utf8.assign(c);
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3302
diff changeset
2575 }
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3302
diff changeset
2576 else
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3302
diff changeset
2577 {
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3302
diff changeset
2578 std::string s(c);
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3302
diff changeset
2579 utf8 = Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions);
b3bdd6dc10f2 don't change encoding of SpecificCharacterSet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3302
diff changeset
2580 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2581 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2582
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2583 std::string newValue;
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2584 ITagVisitor::Action action = visitor.VisitString
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2585 (newValue, parentTags, parentIndexes, tag, vr, utf8);
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2586
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2587 switch (action)
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2588 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2589 case ITagVisitor::Action_None:
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2590 return true;
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2591
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2592 case ITagVisitor::Action_Remove:
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2593 return false;
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2594
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2595 case ITagVisitor::Action_Replace:
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2596 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2597 std::string s = Toolbox::ConvertFromUtf8(newValue, encoding);
2522
ce2dfba9417c fix build with dcmtk 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2513
diff changeset
2598 if (element.putString(s.c_str()) != EC_Normal)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2599 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2905
diff changeset
2600 throw OrthancException(ErrorCode_InternalError,
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2601 "Iterator cannot replace value of tag: " + tag.Format());
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2602 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2603
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2604 return true;
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2605 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2606
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2607 default:
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2608 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2609 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2610 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2611
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2612
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2613 ITagVisitor::Action action;
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2614
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2615 try
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2616 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2617 // http://support.dcmtk.org/docs/dcvr_8h-source.html
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2618 switch (evr)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2619 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2620
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2621 /**
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2622 * Plain string values.
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2623 **/
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2624
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2625 case EVR_DS: // decimal string
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2626 case EVR_IS: // integer string
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2627 case EVR_AS: // age string
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2628 case EVR_DA: // date string
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2629 case EVR_DT: // date time string
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2630 case EVR_TM: // time string
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2631 case EVR_AE: // application entity title
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2632 case EVR_CS: // code string
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2633 case EVR_SH: // short string
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2634 case EVR_LO: // long string
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2635 case EVR_ST: // short text
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2636 case EVR_LT: // long text
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2637 case EVR_UT: // unlimited text
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2638 case EVR_PN: // person name
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2639 case EVR_UI: // unique identifier
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2640 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2641 Uint8* data = NULL;
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2642
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2643 if (element.getUint8Array(data) == EC_Normal)
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2644 {
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2645 const Uint32 length = element.getLength();
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2646 Uint32 l = 0;
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2647 while (l < length &&
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2648 data[l] != 0)
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2649 {
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2650 l++;
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2651 }
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2652
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2653 if (l == length)
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2654 {
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2655 // Not a null-terminated plain string
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2656 action = visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr);
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2657 }
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2658 else
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2659 {
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2660 std::string ignored;
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2661 std::string s(reinterpret_cast<const char*>(data), l);
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2662 action = visitor.VisitString(ignored, parentTags, parentIndexes, tag, vr,
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2663 Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions));
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2664 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2665 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2666 else
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2667 {
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2668 action = visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2669 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2670
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2671 if (action == ITagVisitor::Action_Replace)
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2672 {
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2673 LOG(WARNING) << "Iterator cannot replace this string tag: "
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2674 << FromDcmtkBridge::GetTagName(element)
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2675 << " (" << tag.Format() << ")";
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2676 return true;
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2677 }
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2678
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2679 break;
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2680 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2681
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2682 /**
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2683 * Numeric types
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2684 **/
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2685
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2686 case EVR_SL: // signed long
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2687 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2688 DcmSignedLong& content = dynamic_cast<DcmSignedLong&>(element);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2689
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2690 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2691 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2692
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2693 for (unsigned long i = 0; i < content.getVM(); i++)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2694 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2695 Sint32 f;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2696 if (content.getSint32(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2697 {
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2698 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2699 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2700 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2701
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2702 action = visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2703 break;
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2704 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2705
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2706 case EVR_SS: // signed short
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2707 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2708 DcmSignedShort& content = dynamic_cast<DcmSignedShort&>(element);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2709
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2710 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2711 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2712
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2713 for (unsigned long i = 0; i < content.getVM(); i++)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2714 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2715 Sint16 f;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2716 if (content.getSint16(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2717 {
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2718 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2719 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2720 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2721
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2722 action = visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2723 break;
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2724 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2725
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2726 case EVR_UL: // unsigned long
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2727 #if DCMTK_VERSION_NUMBER >= 362
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2728 case EVR_OL:
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2729 #endif
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2730 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2731 DcmUnsignedLong& content = dynamic_cast<DcmUnsignedLong&>(element);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2732
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2733 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2734 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2735
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2736 for (unsigned long i = 0; i < content.getVM(); i++)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2737 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2738 Uint32 f;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2739 if (content.getUint32(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2740 {
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2741 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2742 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2743 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2744
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2745 action = visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2746 break;
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2747 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2748
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2749 case EVR_US: // unsigned short
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2750 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2751 DcmUnsignedShort& content = dynamic_cast<DcmUnsignedShort&>(element);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2752
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2753 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2754 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2755
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2756 for (unsigned long i = 0; i < content.getVM(); i++)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2757 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2758 Uint16 f;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2759 if (content.getUint16(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2760 {
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2761 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2762 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2763 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2764
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2765 action = visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2766 break;
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2767 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2768
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2769 case EVR_FL: // float single-precision
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2770 case EVR_OF:
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2771 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2772 DcmFloatingPointSingle& content = dynamic_cast<DcmFloatingPointSingle&>(element);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2773
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2774 std::vector<double> values;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2775 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2776
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2777 for (unsigned long i = 0; i < content.getVM(); i++)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2778 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2779 Float32 f;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2780 if (content.getFloat32(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2781 {
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2782 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2783 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2784 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2785
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2786 action = visitor.VisitDoubles(parentTags, parentIndexes, tag, vr, values);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2787 break;
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2788 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2789
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2790 case EVR_FD: // float double-precision
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2791 #if DCMTK_VERSION_NUMBER >= 361
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2792 case EVR_OD:
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3651
diff changeset
2793 #endif
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2794 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2795 DcmFloatingPointDouble& content = dynamic_cast<DcmFloatingPointDouble&>(element);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2796
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2797 std::vector<double> values;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2798 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2799
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2800 for (unsigned long i = 0; i < content.getVM(); i++)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2801 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2802 Float64 f;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2803 if (content.getFloat64(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2804 {
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2805 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2806 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2807 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2808
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2809 action = visitor.VisitDoubles(parentTags, parentIndexes, tag, vr, values);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2810 break;
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2811 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2812
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2813
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2814 /**
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2815 * Attribute tag.
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2816 **/
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2817
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2818 case EVR_AT:
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2819 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2820 DcmAttributeTag& content = dynamic_cast<DcmAttributeTag&>(element);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2821
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2822 std::vector<DicomTag> values;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2823 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2824
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2825 for (unsigned long i = 0; i < content.getVM(); i++)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2826 {
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2827 DcmTagKey f;
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2828 if (content.getTagVal(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2829 {
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2830 DicomTag t(f.getGroup(), f.getElement());
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2831 values.push_back(t);
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3156
diff changeset
2832 }
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2833 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2834
3195
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
2835 assert(vr == ValueRepresentation_AttributeTag);
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2836 action = visitor.VisitAttributes(parentTags, parentIndexes, tag, values);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2837 break;
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2838 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2839
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2840
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2841 /**
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2842 * Sequence types, should never occur at this point because of
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2843 * "element.isLeaf()".
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2844 **/
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2845
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2846 case EVR_SQ: // sequence of items
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2847 {
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2848 return true;
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2849 }
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2850
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2851
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2852 /**
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2853 * Internal to DCMTK.
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2854 **/
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2855
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2856 case EVR_xs: // SS or US depending on context
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2857 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2858 case EVR_na: // na="not applicable", for data which has no VR
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2859 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2860 case EVR_item: // used internally for items
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2861 case EVR_metainfo: // used internally for meta info datasets
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2862 case EVR_dataset: // used internally for datasets
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2863 case EVR_fileFormat: // used internally for DICOM files
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2864 case EVR_dicomDir: // used internally for DICOMDIR objects
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2865 case EVR_dirRecord: // used internally for DICOMDIR records
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2866 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2867 case EVR_pixelItem: // used internally for pixel items in a compressed image
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2868 case EVR_PixelData: // used internally for uncompressed pixeld data
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2869 case EVR_OverlayData: // used internally for overlay data
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2870 {
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2871 action = visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr);
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2872 break;
3198
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2873 }
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2874
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2875
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2876 /**
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2877 * Default case.
7724ed267b5c unit testing dicomweb conversion
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
2878 **/
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2879
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2880 default:
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2881 return true;
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2882 }
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2883
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2884 switch (action)
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2885 {
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2886 case ITagVisitor::Action_None:
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2887 return true; // We're done
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2888
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2889 case ITagVisitor::Action_Remove:
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2890 return false;
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2891
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2892 case ITagVisitor::Action_Replace:
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2893 throw OrthancException(ErrorCode_NotImplemented, "Iterator cannot replace non-string-like data");
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2894
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2895 default:
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2896 throw OrthancException(ErrorCode_ParameterOutOfRange);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2897 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2898 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2899 catch (boost::bad_lexical_cast&)
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2900 {
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2901 return true;
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2902 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2903 catch (std::bad_cast&)
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2904 {
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2905 return true;
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2906 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2907 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2908
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2909
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2910 // Returns "true" iff the element must be kept. If "false" is
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2911 // returned, the element will be removed.
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2912 static bool ApplyVisitorToElement(DcmElement& element,
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2913 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2914 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2915 const std::vector<size_t>& parentIndexes,
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2916 Encoding encoding,
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2917 bool hasCodeExtensions)
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2918 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2919 assert(parentTags.size() == parentIndexes.size());
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2920
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2921 DicomTag tag(FromDcmtkBridge::Convert(element.getTag()));
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2922
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2923 if (element.isLeaf())
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2924 {
4734
b51c08bd5c38 added ITagVisitor::Action_Remove
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4697
diff changeset
2925 return ApplyVisitorToLeaf(element, visitor, parentTags, parentIndexes, tag, encoding, hasCodeExtensions);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2926 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2927 else
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2928 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2929 // "All subclasses of DcmElement except for DcmSequenceOfItems
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2930 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2931 // etc. are not." The following dynamic_cast is thus OK.
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2932 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element);
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2933
4737
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2934 ITagVisitor::Action action = visitor.VisitSequence(parentTags, parentIndexes, tag, sequence.card());
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2935
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2936 switch (action)
3195
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
2937 {
4737
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2938 case ITagVisitor::Action_None:
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2939 if (sequence.card() != 0) // Minor optimization to avoid creating "tags" and "indexes" if not needed
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2940 {
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2941 std::vector<DicomTag> tags = parentTags;
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2942 std::vector<size_t> indexes = parentIndexes;
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2943 tags.push_back(tag);
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2944 indexes.push_back(0);
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2945
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2946 for (unsigned long i = 0; i < sequence.card(); i++)
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2947 {
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2948 indexes.back() = static_cast<size_t>(i);
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2949 DcmItem* child = sequence.getItem(i);
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2950 ApplyVisitorToDataset(*child, visitor, tags, indexes, encoding, hasCodeExtensions);
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2951 }
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2952 }
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2953
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2954 return true; // Keep
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2955
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2956 case ITagVisitor::Action_Remove:
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2957 return false;
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2958
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2959 case ITagVisitor::Action_Replace:
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2960 throw OrthancException(ErrorCode_NotImplemented, "Iterator cannot replace sequences");
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2961
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2962 default:
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2963 throw OrthancException(ErrorCode_ParameterOutOfRange);
3195
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
2964 }
4737
979ae3ea3381 DANGEROUS commit: Anonymization is now also applied to nested sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4734
diff changeset
2965
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2966 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2967 }
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2968
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2969
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2970 void FromDcmtkBridge::Apply(DcmItem& dataset,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2971 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2972 Encoding defaultEncoding)
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2973 {
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2974 std::vector<DicomTag> parentTags;
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2975 std::vector<size_t> parentIndexes;
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2976 bool hasCodeExtensions;
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2977 Encoding encoding = DetectEncoding(hasCodeExtensions, dataset, defaultEncoding);
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3209
diff changeset
2978 ApplyVisitorToDataset(dataset, visitor, parentTags, parentIndexes, encoding, hasCodeExtensions);
2499
83b8b6743531 ITagVisitor - for anonymization relationships
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2470
diff changeset
2979 }
3882
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
2980
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
2981
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
2982
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
2983 bool FromDcmtkBridge::LookupOrthancTransferSyntax(DicomTransferSyntax& target,
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
2984 DcmFileFormat& dicom)
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
2985 {
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
2986 if (dicom.getDataset() == NULL)
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
2987 {
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
2988 throw OrthancException(ErrorCode_InternalError);
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
2989 }
4334
b2366bc023f8 Fix access to videos as a single raw frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4313
diff changeset
2990 else
b2366bc023f8 Fix access to videos as a single raw frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4313
diff changeset
2991 {
b2366bc023f8 Fix access to videos as a single raw frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4313
diff changeset
2992 return LookupOrthancTransferSyntax(target, *dicom.getDataset());
b2366bc023f8 Fix access to videos as a single raw frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4313
diff changeset
2993 }
b2366bc023f8 Fix access to videos as a single raw frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4313
diff changeset
2994 }
b2366bc023f8 Fix access to videos as a single raw frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4313
diff changeset
2995
b2366bc023f8 Fix access to videos as a single raw frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4313
diff changeset
2996
b2366bc023f8 Fix access to videos as a single raw frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4313
diff changeset
2997 bool FromDcmtkBridge::LookupOrthancTransferSyntax(DicomTransferSyntax& target,
b2366bc023f8 Fix access to videos as a single raw frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4313
diff changeset
2998 DcmDataset& dataset)
b2366bc023f8 Fix access to videos as a single raw frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4313
diff changeset
2999 {
3883
795c9ca5eb91 DANGEROUS changeset: replaced "getOriginalXfer()" by "getCurrentXfer()" throughout Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3882
diff changeset
3000 E_TransferSyntax xfer = dataset.getCurrentXfer();
3882
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3001 if (xfer == EXS_Unknown)
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3002 {
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3003 dataset.updateOriginalXfer();
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3004 xfer = dataset.getOriginalXfer();
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3005 if (xfer == EXS_Unknown)
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3006 {
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3007 throw OrthancException(ErrorCode_BadFileFormat,
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3008 "Cannot determine the transfer syntax of the DICOM instance");
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3009 }
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3010 }
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3011
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3012 return FromDcmtkBridge::LookupOrthancTransferSyntax(target, xfer);
904575738462 implemented IDicomTranscoder::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3881
diff changeset
3013 }
4501
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3014
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3015
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3016 void FromDcmtkBridge::LogMissingTagsForStore(DcmDataset& dicom)
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3017 {
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3018 std::string patientId, studyInstanceUid, seriesInstanceUid, sopInstanceUid;
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3019
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3020 const char* c = NULL;
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3021 if (dicom.findAndGetString(DCM_PatientID, c).good() &&
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3022 c != NULL)
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3023 {
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3024 patientId.assign(c);
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3025 }
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3026
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3027 c = NULL;
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3028 if (dicom.findAndGetString(DCM_StudyInstanceUID, c).good() &&
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3029 c != NULL)
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3030 {
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3031 studyInstanceUid.assign(c);
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3032 }
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3033
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3034 c = NULL;
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3035 if (dicom.findAndGetString(DCM_SeriesInstanceUID, c).good() &&
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3036 c != NULL)
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3037 {
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3038 seriesInstanceUid.assign(c);
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3039 }
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3040
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3041 c = NULL;
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3042 if (dicom.findAndGetString(DCM_SOPInstanceUID, c).good() &&
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3043 c != NULL)
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3044 {
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3045 sopInstanceUid.assign(c);
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3046 }
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3047
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3048 DicomMap::LogMissingTagsForStore(patientId, studyInstanceUid, seriesInstanceUid, sopInstanceUid);
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4476
diff changeset
3049 }
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3050
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3051
4770
248408d2b336 hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4737
diff changeset
3052 void FromDcmtkBridge::IDicomPathVisitor::ApplyInternal(FromDcmtkBridge::IDicomPathVisitor& visitor,
248408d2b336 hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4737
diff changeset
3053 DcmItem& item,
248408d2b336 hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4737
diff changeset
3054 const DicomPath& pattern,
248408d2b336 hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4737
diff changeset
3055 const DicomPath& actualPath)
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3056 {
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3057 const size_t level = actualPath.GetPrefixLength();
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3058
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3059 if (level == pattern.GetPrefixLength())
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3060 {
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3061 visitor.Visit(item, actualPath);
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3062 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3063 else
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3064 {
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3065 assert(level < pattern.GetPrefixLength());
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3066
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3067 const DicomTag& tmp = pattern.GetPrefixTag(level);
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3068 DcmTagKey tag(tmp.GetGroup(), tmp.GetElement());
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3069
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3070 DcmSequenceOfItems *sequence = NULL;
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3071 if (item.findAndGetSequence(tag, sequence).good() &&
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3072 sequence != NULL)
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3073 {
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3074 for (unsigned long i = 0; i < sequence->card(); i++)
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3075 {
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3076 if (pattern.IsPrefixUniversal(level) ||
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3077 pattern.GetPrefixIndex(level) == static_cast<size_t>(i))
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3078 {
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3079 DcmItem *child = sequence->getItem(i);
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3080 if (child != NULL)
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3081 {
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3082 DicomPath childPath = actualPath;
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3083 childPath.AddIndexedTagToPrefix(pattern.GetPrefixTag(level), static_cast<size_t>(i));
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3084
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3085 ApplyInternal(visitor, *child, pattern, childPath);
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3086 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3087 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3088 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3089 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3090 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3091 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3092
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3093
4770
248408d2b336 hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4737
diff changeset
3094 void FromDcmtkBridge::IDicomPathVisitor::Apply(IDicomPathVisitor& visitor,
248408d2b336 hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4737
diff changeset
3095 DcmDataset& dataset,
248408d2b336 hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4737
diff changeset
3096 const DicomPath& path)
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3097 {
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3098 DicomPath actualPath(path.GetFinalTag());
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3099 ApplyInternal(visitor, dataset, path, actualPath);
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3100 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3101
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3102
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3103 void FromDcmtkBridge::RemovePath(DcmDataset& dataset,
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3104 const DicomPath& path)
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3105 {
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3106 class Visitor : public FromDcmtkBridge::IDicomPathVisitor
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3107 {
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3108 public:
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3109 virtual void Visit(DcmItem& item,
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3110 const DicomPath& path) ORTHANC_OVERRIDE
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3111 {
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3112 DcmTagKey key(path.GetFinalTag().GetGroup(), path.GetFinalTag().GetElement());
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3113 std::unique_ptr<DcmElement> removed(item.remove(key));
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3114 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3115 };
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3116
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3117 Visitor visitor;
4770
248408d2b336 hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4737
diff changeset
3118 IDicomPathVisitor::Apply(visitor, dataset, path);
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3119 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3120
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3121
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3122 void FromDcmtkBridge::ClearPath(DcmDataset& dataset,
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3123 const DicomPath& path,
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3124 bool onlyIfExists)
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3125 {
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3126 class Visitor : public FromDcmtkBridge::IDicomPathVisitor
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3127 {
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3128 public:
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3129 bool onlyIfExists_;
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3130
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3131 public:
4690
13efc0967cea cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4683
diff changeset
3132 explicit Visitor(bool onlyIfExists) :
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3133 onlyIfExists_(onlyIfExists)
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3134 {
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3135 }
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3136
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3137 virtual void Visit(DcmItem& item,
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3138 const DicomPath& path) ORTHANC_OVERRIDE
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3139 {
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3140 DcmTagKey key(path.GetFinalTag().GetGroup(), path.GetFinalTag().GetElement());
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3141
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3142 if (onlyIfExists_ &&
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3143 !item.tagExists(key))
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3144 {
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3145 // The tag is non-existing, do not clear it
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3146 }
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3147 else
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3148 {
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3149 if (!item.insertEmptyElement(key, OFTrue /* replace old value */).good())
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3150 {
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3151 throw OrthancException(ErrorCode_InternalError);
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3152 }
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3153 }
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3154 }
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3155 };
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3156
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3157 Visitor visitor(onlyIfExists);
4770
248408d2b336 hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4737
diff changeset
3158 IDicomPathVisitor::Apply(visitor, dataset, path);
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3159 }
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3160
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3161
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3162 void FromDcmtkBridge::ReplacePath(DcmDataset& dataset,
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3163 const DicomPath& path,
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3164 const DcmElement& element,
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3165 DicomReplaceMode mode)
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3166 {
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3167 class Visitor : public FromDcmtkBridge::IDicomPathVisitor
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3168 {
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3169 private:
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3170 std::unique_ptr<DcmElement> element_;
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3171 DicomReplaceMode mode_;
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3172
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3173 public:
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3174 Visitor(const DcmElement& element,
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3175 DicomReplaceMode mode) :
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3176 element_(dynamic_cast<DcmElement*>(element.clone())),
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3177 mode_(mode)
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3178 {
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3179 if (element_.get() == NULL)
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3180 {
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3181 throw OrthancException(ErrorCode_InternalError, "Cannot clone DcmElement");
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3182 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3183 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3184
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3185 virtual void Visit(DcmItem& item,
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3186 const DicomPath& path) ORTHANC_OVERRIDE
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3187 {
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3188 std::unique_ptr<DcmElement> cloned(dynamic_cast<DcmElement*>(element_->clone()));
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3189 if (cloned.get() == NULL)
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3190 {
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3191 throw OrthancException(ErrorCode_InternalError, "Cannot clone DcmElement");
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3192 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3193 else
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3194 {
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3195 DcmTagKey key(path.GetFinalTag().GetGroup(), path.GetFinalTag().GetElement());
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3196
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3197 if (!item.tagExists(key))
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3198 {
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3199 switch (mode_)
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3200 {
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3201 case DicomReplaceMode_InsertIfAbsent:
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3202 break; // Fine, we can proceed with insertion
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3203
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3204 case DicomReplaceMode_ThrowIfAbsent:
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3205 throw OrthancException(ErrorCode_InexistentItem, "Cannot replace inexistent tag: " + GetTagName(*element_));
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3206
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3207 case DicomReplaceMode_IgnoreIfAbsent:
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3208 return; // Don't proceed with insertion
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3209
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3210 default:
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3211 throw OrthancException(ErrorCode_ParameterOutOfRange);
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3212 }
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3213 }
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3214
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3215 if (!item.insert(cloned.release(), OFTrue /* replace old */).good())
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3216 {
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3217 throw OrthancException(ErrorCode_InternalError, "Cannot replace an element: " + GetTagName(*element_));
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3218 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3219 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3220 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3221 };
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3222
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3223 DcmTagKey key(path.GetFinalTag().GetGroup(), path.GetFinalTag().GetElement());
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3224
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3225 if (element.getTag() != key)
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3226 {
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3227 throw OrthancException(ErrorCode_ParameterOutOfRange,
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3228 "The final tag must be the same as the tag of the element during a replacement");
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3229 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3230 else
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3231 {
4683
7182f5732480 use of DicomPath in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4682
diff changeset
3232 Visitor visitor(element, mode);
4770
248408d2b336 hiding FromDcmtkBridge::Apply() on IDicomPathVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4737
diff changeset
3233 IDicomPathVisitor::Apply(visitor, dataset, path);
4682
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3234 }
d38a7040474a FromDcmtkBridge::RemovePath() and FromDcmtkBridge::ReplacePath()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4663
diff changeset
3235 }
4771
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3236
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3237
4777
3b78ba359db3 Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4771
diff changeset
3238 bool FromDcmtkBridge::LookupSequenceItem(DicomMap& target,
3b78ba359db3 Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4771
diff changeset
3239 DcmDataset& dataset,
3b78ba359db3 Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4771
diff changeset
3240 const DicomPath& path,
3b78ba359db3 Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4771
diff changeset
3241 size_t sequenceIndex)
4771
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3242 {
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3243 class Visitor : public FromDcmtkBridge::IDicomPathVisitor
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3244 {
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3245 private:
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3246 bool found_;
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3247 DicomMap& target_;
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3248 size_t sequenceIndex_;
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3249
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3250 public:
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3251 Visitor(DicomMap& target,
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3252 size_t sequenceIndex) :
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3253 found_(false),
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3254 target_(target),
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3255 sequenceIndex_(sequenceIndex)
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3256 {
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3257 }
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3258
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3259 virtual void Visit(DcmItem& item,
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3260 const DicomPath& path) ORTHANC_OVERRIDE
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3261 {
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3262 DcmTagKey tag(path.GetFinalTag().GetGroup(), path.GetFinalTag().GetElement());
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3263
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3264 DcmSequenceOfItems *sequence = NULL;
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3265
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3266 if (item.findAndGetSequence(tag, sequence).good() &&
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3267 sequence != NULL &&
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3268 sequenceIndex_ < sequence->card())
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3269 {
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3270 std::set<DicomTag> ignoreTagLength;
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3271 ExtractDicomSummary(target_, *sequence->getItem(sequenceIndex_), 0, ignoreTagLength);
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3272 found_ = true;
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3273 }
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3274 }
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3275
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3276 bool HasFound() const
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3277 {
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3278 return found_;
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3279 }
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3280 };
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3281
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3282 Visitor visitor(target, sequenceIndex);
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3283 IDicomPathVisitor::Apply(visitor, dataset, path);
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3284 return visitor.HasFound();
9f207131c7f4 added ParsedDicomFile::LookupSubSequence()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4770
diff changeset
3285 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
3286 }
3730
ae31ba2b09a6 toolbox: LookupTransferSyntax()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3727
diff changeset
3287
ae31ba2b09a6 toolbox: LookupTransferSyntax()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3727
diff changeset
3288
ae31ba2b09a6 toolbox: LookupTransferSyntax()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3727
diff changeset
3289 #include "./FromDcmtkBridge_TransferSyntaxes.impl.h"