Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 5704:0c2f0d72d143 find-refactoring-clean
only keep experimental versions
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Fri, 12 Jul 2024 17:17:31 +0200 |
| parents | 380a71e0d7e7 |
| children | a786da7599d5 |
| rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2024-2024 Orthanc Team SRL, Belgium |
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7 * Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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8 * |
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9 * This program is free software: you can redistribute it and/or |
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10 * modify it under the terms of the GNU General Public License as |
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11 * published by the Free Software Foundation, either version 3 of the |
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12 * License, or (at your option) any later version. |
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13 * |
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14 * This program is distributed in the hope that it will be useful, but |
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15 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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17 * General Public License for more details. |
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18 * |
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19 * You should have received a copy of the GNU General Public License |
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20 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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21 **/ |
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22 |
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23 |
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24 #include "../PrecompiledHeadersServer.h" |
| 5608 | 25 #include "../ResourceFinder.h" |
| 26 | |
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27 #include "OrthancRestApi.h" |
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28 |
| 4045 | 29 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
| 30 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
| 31 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
| 32 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
| 33 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
| 34 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
| 35 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
| 36 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
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37 #include "../../../OrthancFramework/Sources/Images/NumpyWriter.h" |
| 4045 | 38 #include "../../../OrthancFramework/Sources/Logging.h" |
| 39 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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40 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
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42 #include "../OrthancConfiguration.h" |
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43 #include "../Search/DatabaseLookup.h" |
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44 #include "../ServerContext.h" |
| 2131 | 45 #include "../ServerToolbox.h" |
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46 #include "../SliceOrdering.h" |
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47 |
| 3687 | 48 // This "include" is mandatory for Release builds using Linux Standard Base |
| 49 #include <boost/math/special_functions/round.hpp> | |
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50 #include <boost/shared_ptr.hpp> |
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51 |
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52 /** |
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53 * This semaphore is used to limit the number of concurrent HTTP |
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54 * requests on CPU-intensive routes of the REST API, in order to |
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55 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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56 **/ |
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57 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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58 |
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59 |
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60 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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61 |
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62 static const char* const IGNORE_LENGTH = "ignore-length"; |
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63 static const char* const RECONSTRUCT_FILES = "ReconstructFiles"; |
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64 static const char* const LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS = "LimitToThisLevelMainDicomTags"; |
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65 static const char* const ARG_WHOLE = "whole"; |
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66 |
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67 |
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68 namespace Orthanc |
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69 { |
| 4415 | 70 static std::string GetDocumentationSampleResource(ResourceType type) |
| 71 { | |
| 72 switch (type) | |
| 73 { | |
| 74 case Orthanc::ResourceType_Instance: | |
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75 return "https://orthanc.uclouvain.be/demo/instances/6582b1c0-292ad5ab-ba0f088f-f7a1766f-9a29a54f"; |
| 4415 | 76 break; |
| 77 | |
| 78 case Orthanc::ResourceType_Series: | |
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79 return "https://orthanc.uclouvain.be/demo/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; |
| 4415 | 80 break; |
| 81 | |
| 82 case Orthanc::ResourceType_Study: | |
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83 return "https://orthanc.uclouvain.be/demo/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; |
| 4415 | 84 break; |
| 85 | |
| 86 case Orthanc::ResourceType_Patient: | |
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87 return "https://orthanc.uclouvain.be/demo/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; |
| 4415 | 88 break; |
| 89 | |
| 90 default: | |
| 91 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 92 } | |
| 93 } | |
| 94 | |
| 95 | |
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96 static void AnswerDicomAsJson(RestApiCall& call, |
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97 const Json::Value& dicom, |
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98 DicomToJsonFormat mode) |
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99 { |
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100 if (mode != DicomToJsonFormat_Full) |
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101 { |
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102 Json::Value simplified; |
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103 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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104 call.GetOutput().AnswerJson(simplified); |
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105 } |
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106 else |
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107 { |
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108 call.GetOutput().AnswerJson(dicom); |
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109 } |
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110 } |
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111 |
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112 |
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113 static void ParseSetOfTags(std::set<DicomTag>& target, |
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114 const RestApiGetCall& call, |
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115 const std::string& argument) |
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116 { |
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117 target.clear(); |
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118 |
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119 if (call.HasArgument(argument)) |
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120 { |
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121 std::vector<std::string> tags; |
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122 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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123 |
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124 for (size_t i = 0; i < tags.size(); i++) |
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125 { |
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126 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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127 } |
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128 } |
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129 } |
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130 |
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131 |
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132 // List all the patients, studies, series or instances ---------------------- |
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133 |
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134 template <enum ResourceType resourceType> |
| 974 | 135 static void ListResources(RestApiGetCall& call) |
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136 { |
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137 if (call.IsDocumentation()) |
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138 { |
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139 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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140 OrthancRestApi::DocumentRequestedTags(call); |
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141 |
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142 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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143 call.GetDocumentation() |
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144 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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145 .SetSummary("List the available " + resources) |
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146 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
| 4403 | 147 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
| 148 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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149 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
| 4403 | 150 "If present, retrieve detailed information about the individual " + resources, false) |
| 4404 | 151 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 152 "about the reported " + resources + " (if `expand` argument is provided)") | |
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153 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/" + resources + "?since=0&limit=2", true); |
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154 return; |
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155 } |
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156 |
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157 // TODO-FIND: include the FindRequest options parsing in a method (parse from get-arguments and from post payload) |
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158 // TODO-FIND: support other values for expand like expand=MainDicomTags,Labels,Parent,SeriesStatus |
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159 const bool expand = (call.HasArgument("expand") && |
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160 call.GetBooleanArgument("expand", true)); |
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161 |
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162 std::set<DicomTag> requestedTags; |
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163 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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164 |
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165 ResourceFinder finder(resourceType, expand); |
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166 finder.AddRequestedTags(requestedTags); |
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167 finder.SetFormat(OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human)); |
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168 |
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169 if (call.HasArgument("limit") || |
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170 call.HasArgument("since")) |
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171 { |
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172 if (!call.HasArgument("limit")) |
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173 { |
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174 throw OrthancException(ErrorCode_BadRequest, |
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175 "Missing \"limit\" argument for GET request against: " + |
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176 call.FlattenUri()); |
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177 } |
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178 |
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179 if (!call.HasArgument("since")) |
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180 { |
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181 throw OrthancException(ErrorCode_BadRequest, |
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182 "Missing \"since\" argument for GET request against: " + |
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183 call.FlattenUri()); |
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184 } |
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185 |
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186 uint64_t since = boost::lexical_cast<uint64_t>(call.GetArgument("since", "")); |
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187 uint64_t limit = boost::lexical_cast<uint64_t>(call.GetArgument("limit", "")); |
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188 finder.SetLimitsSince(since); |
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189 finder.SetLimitsCount(limit); |
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190 } |
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191 |
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192 Json::Value answer; |
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193 finder.Execute(answer, OrthancRestApi::GetContext(call)); |
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194 call.GetOutput().AnswerJson(answer); |
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195 } |
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196 |
| 4409 | 197 |
| 198 | |
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199 template <enum ResourceType resourceType> |
| 974 | 200 static void GetSingleResource(RestApiGetCall& call) |
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201 { |
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202 if (call.IsDocumentation()) |
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203 { |
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204 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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205 OrthancRestApi::DocumentRequestedTags(call); |
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206 |
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207 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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208 call.GetDocumentation() |
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209 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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210 .SetSummary("Get information about some " + resource) |
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211 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 212 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 4409 | 213 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
| 214 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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215 return; |
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216 } |
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217 |
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218 std::set<DicomTag> requestedTags; |
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219 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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220 |
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221 ResourceFinder finder(resourceType, true /* expand */); |
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222 finder.AddRequestedTags(requestedTags); |
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223 finder.SetFormat(OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human)); |
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224 finder.SetOrthancId(resourceType, call.GetUriComponent("id", "")); |
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225 |
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226 Json::Value json; |
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227 if (finder.ExecuteOneResource(json, OrthancRestApi::GetContext(call))) |
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228 { |
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229 call.GetOutput().AnswerJson(json); |
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230 } |
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231 } |
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232 |
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233 template <enum ResourceType resourceType> |
| 974 | 234 static void DeleteSingleResource(RestApiDeleteCall& call) |
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235 { |
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236 if (call.IsDocumentation()) |
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237 { |
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238 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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239 call.GetDocumentation() |
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240 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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241 .SetSummary("Delete some " + resource) |
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242 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 243 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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244 return; |
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245 } |
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246 |
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247 Json::Value remainingAncestor; |
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248 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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249 { |
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250 call.GetOutput().AnswerJson(remainingAncestor); |
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251 } |
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252 } |
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253 |
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254 |
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255 // Get information about a single patient ----------------------------------- |
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256 |
| 974 | 257 static void IsProtectedPatient(RestApiGetCall& call) |
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258 { |
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259 if (call.IsDocumentation()) |
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260 { |
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261 call.GetDocumentation() |
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262 .SetTag("Patients") |
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263 .SetSummary("Is the patient protected against recycling?") |
| 4404 | 264 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
| 4403 | 265 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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266 return; |
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267 } |
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268 |
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269 std::string publicId = call.GetUriComponent("id", ""); |
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270 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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271 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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272 } |
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273 |
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274 |
| 974 | 275 static void SetPatientProtection(RestApiPutCall& call) |
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276 { |
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277 if (call.IsDocumentation()) |
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278 { |
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279 call.GetDocumentation() |
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280 .SetTag("Patients") |
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281 .SetSummary("Protect/Unprotect a patient against recycling") |
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282 .SetDescription("Protects a patient by sending `1` or `true` in the payload request. " |
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283 "Unprotects a patient by sending `0` or `false` in the payload requests. " |
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284 "More info: https://orthanc.uclouvain.be/book/faq/features.html#recycling-protection") |
| 4404 | 285 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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286 return; |
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287 } |
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288 |
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289 ServerContext& context = OrthancRestApi::GetContext(call); |
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290 |
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291 std::string publicId = call.GetUriComponent("id", ""); |
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292 |
|
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293 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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294 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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295 } |
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296 |
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297 |
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298 // Get information about a single instance ---------------------------------- |
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299 |
| 974 | 300 static void GetInstanceFile(RestApiGetCall& call) |
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301 { |
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302 static const char* const TRANSCODE = "transcode"; |
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303 |
|
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304 if (call.IsDocumentation()) |
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305 { |
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306 call.GetDocumentation() |
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307 .SetTag("Instances") |
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308 .SetSummary("Download DICOM") |
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309 .SetDescription("Download one DICOM instance") |
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310 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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311 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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312 .SetHttpGetArgument(TRANSCODE, RestApiCallDocumentation::Type_String, |
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313 "If present, the DICOM file will be transcoded to the provided " |
|
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314 "transfer syntax: https://orthanc.uclouvain.be/book/faq/transcoding.html", false) |
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315 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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316 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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317 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
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318 return; |
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319 } |
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320 |
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321 ServerContext& context = OrthancRestApi::GetContext(call); |
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322 |
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323 std::string publicId = call.GetUriComponent("id", ""); |
|
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324 |
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325 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
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326 if (accept != call.GetHttpHeaders().end()) |
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327 { |
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328 // New in Orthanc 1.5.4 |
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329 try |
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330 { |
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331 MimeType mime = StringToMimeType(accept->second.c_str()); |
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332 |
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333 if (mime == MimeType_DicomWebJson || |
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334 mime == MimeType_DicomWebXml) |
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335 { |
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336 DicomWebJsonVisitor visitor; |
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337 |
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338 { |
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339 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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340 locker.GetDicom().Apply(visitor); |
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341 } |
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342 |
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343 if (mime == MimeType_DicomWebJson) |
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344 { |
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345 std::string s = visitor.GetResult().toStyledString(); |
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346 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
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347 } |
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348 else |
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349 { |
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350 std::string xml; |
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351 visitor.FormatXml(xml); |
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352 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
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353 } |
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354 |
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355 return; |
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356 } |
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357 } |
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358 catch (OrthancException&) |
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359 { |
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360 } |
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361 } |
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362 |
|
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363 if (call.HasArgument(TRANSCODE)) |
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364 { |
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365 std::string source; |
| 5427 | 366 std::string attachmentId; |
|
5426
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367 std::string transcoded; |
| 5427 | 368 context.ReadDicom(source, attachmentId, publicId); |
| 369 | |
| 370 if (context.TranscodeWithCache(transcoded, source, publicId, attachmentId, GetTransferSyntax(call.GetArgument(TRANSCODE, "")))) | |
|
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371 { |
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372 call.GetOutput().AnswerBuffer(transcoded, MimeType_Dicom); |
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373 } |
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374 } |
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375 else |
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376 { |
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377 // return the attachment without any transcoding |
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378 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
|
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379 } |
|
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380 } |
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381 |
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382 |
| 974 | 383 static void ExportInstanceFile(RestApiPostCall& call) |
|
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384 { |
| 4421 | 385 if (call.IsDocumentation()) |
| 386 { | |
| 387 call.GetDocumentation() | |
| 388 .SetTag("Instances") | |
| 389 .SetSummary("Write DICOM onto filesystem") | |
|
5200
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390 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running. This is insecure for " |
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391 "Orthanc servers that are remotely accessible since one could overwrite any system file. " |
|
5275
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fix inclusion of winsock.h
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392 "Since Orthanc 1.12.0, this route is disabled by default, but can be enabled using " |
|
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fix inclusion of winsock.h
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393 "the `RestApiWriteToFileSystemEnabled` configuration option.") |
| 4421 | 394 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
| 395 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
| 396 return; | |
| 397 } | |
| 398 | |
|
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399 ServerContext& context = OrthancRestApi::GetContext(call); |
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400 |
|
5200
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401 if (!context.IsRestApiWriteToFileSystemEnabled()) |
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402 { |
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403 LOG(ERROR) << "The URI /instances/../export is disallowed for security, " |
|
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404 << "check your configuration option `RestApiWriteToFileSystemEnabled`"; |
|
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405 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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406 return; |
|
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407 } |
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|
408 |
|
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|
409 std::string publicId = call.GetUriComponent("id", ""); |
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410 |
|
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|
411 std::string dicom; |
| 2124 | 412 context.ReadDicom(dicom, publicId); |
|
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413 |
|
1446
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refactoring: IHttpHandler does not use std::string to hold the request body
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diff
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|
414 std::string target; |
|
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|
415 call.BodyToString(target); |
| 2140 | 416 SystemToolbox::WriteFile(dicom, target); |
|
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417 |
|
2908
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new enumeration: MimeType
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|
418 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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419 } |
|
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420 |
|
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changeset
|
421 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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2447
diff
changeset
|
422 template <DicomToJsonFormat format> |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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423 static void GetInstanceTagsInternal(RestApiGetCall& call, |
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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|
424 bool whole) |
|
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|
425 { |
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|
426 ServerContext& context = OrthancRestApi::GetContext(call); |
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|
427 |
|
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|
428 std::string publicId = call.GetUriComponent("id", ""); |
|
2409
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ignore-length argument if retrieving DICOM tags
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2408
diff
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|
429 |
|
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ignore-length argument if retrieving DICOM tags
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changeset
|
430 std::set<DicomTag> ignoreTagLength; |
|
4722
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added missing documentation of "ignore-length" in "/instances/{id}/tags"
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4716
diff
changeset
|
431 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
5647
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432 |
|
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|
433 if (whole) |
|
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|
434 { |
|
5647
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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|
435 // This is new in Orthanc 1.12.4. Reference: |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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diff
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|
436 // https://discourse.orthanc-server.org/t/private-tags-with-group-7fe0-are-not-provided-via-rest-api/4744 |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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|
437 const DicomToJsonFlags flags = static_cast<DicomToJsonFlags>(DicomToJsonFlags_Default & ~DicomToJsonFlags_StopAfterPixelData); |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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438 |
|
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|
439 Json::Value answer; |
|
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440 |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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|
441 { |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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|
442 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
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changeset
|
443 locker.GetDicom().DatasetToJson(answer, format, flags, |
|
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|
444 ORTHANC_MAXIMUM_TAG_LENGTH, ignoreTagLength); |
|
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445 } |
|
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446 |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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|
447 call.GetOutput().AnswerJson(answer); |
|
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448 } |
|
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|
449 else |
|
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diff
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450 { |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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|
451 if (format != DicomToJsonFormat_Full || |
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|
452 !ignoreTagLength.empty()) |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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|
453 { |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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changeset
|
454 Json::Value full; |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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|
455 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
|
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changeset
|
456 AnswerDicomAsJson(call, full, format); |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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457 } |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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458 else |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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|
459 { |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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|
460 // This path allows one to avoid the JSON decoding if no |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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461 // simplification is asked, and if no "ignore-length" argument |
|
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added "?whole" option to "/instances/{id}/tags" to access tags stored after pixel data
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462 // is present |
|
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|
463 Json::Value full; |
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464 context.ReadDicomAsJson(full, publicId); |
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465 call.GetOutput().AnswerJson(full); |
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466 } |
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467 } |
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468 } |
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469 |
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470 |
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471 static void DocumentGetInstanceTags(RestApiGetCall& call) |
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472 { |
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473 call.GetDocumentation() |
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474 .SetTag("Instances") |
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475 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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476 .SetHttpGetArgument( |
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477 IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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478 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
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479 .SetHttpGetArgument( |
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480 ARG_WHOLE, RestApiCallDocumentation::Type_Boolean, "Whether to read the whole DICOM file from the " |
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481 "storage area (new in Orthanc 1.12.4). If set to \"false\" (default value), the DICOM file is read " |
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482 "until the pixel data tag (7fe0,0010) to optimize access to storage. Setting the option " |
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483 "to \"true\" provides access to the DICOM tags stored after the pixel data tag.", false) |
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484 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value"); |
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485 } |
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486 |
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487 |
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488 static void GetInstanceTags(RestApiGetCall& call) |
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489 { |
| 4404 | 490 if (call.IsDocumentation()) |
| 491 { | |
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492 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
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493 DocumentGetInstanceTags(call); |
| 4404 | 494 call.GetDocumentation() |
| 495 .SetSummary("Get DICOM tags") | |
| 496 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
| 497 "combines hexadecimal tags with human-readable description.") | |
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498 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
| 4404 | 499 return; |
| 500 } | |
| 501 | |
|
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502 const bool whole = call.GetBooleanArgument(ARG_WHOLE, false); |
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503 |
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504 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
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505 { |
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506 case DicomToJsonFormat_Human: |
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507 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call, whole); |
|
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508 break; |
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509 |
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510 case DicomToJsonFormat_Short: |
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511 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call, whole); |
|
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512 break; |
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513 |
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514 case DicomToJsonFormat_Full: |
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515 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call, whole); |
|
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516 break; |
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517 |
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518 default: |
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519 throw OrthancException(ErrorCode_InternalError); |
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520 } |
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521 } |
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522 |
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523 |
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524 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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525 { |
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526 if (call.IsDocumentation()) |
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527 { |
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528 DocumentGetInstanceTags(call); |
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529 call.GetDocumentation() |
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530 .SetSummary("Get human-readable tags") |
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531 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
|
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532 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
|
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533 return; |
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534 } |
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535 else |
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536 { |
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537 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call, call.GetBooleanArgument(ARG_WHOLE, false)); |
|
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538 } |
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539 } |
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540 |
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541 |
| 974 | 542 static void ListFrames(RestApiGetCall& call) |
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543 { |
| 4414 | 544 if (call.IsDocumentation()) |
| 545 { | |
| 546 call.GetDocumentation() | |
| 547 .SetTag("Instances") | |
| 548 .SetSummary("List available frames") | |
| 549 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
| 550 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 551 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
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552 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); |
| 4414 | 553 return; |
| 554 } | |
| 555 | |
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556 std::string publicId = call.GetUriComponent("id", ""); |
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557 |
|
1950
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558 unsigned int numberOfFrames; |
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559 |
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560 { |
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561 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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562 numberOfFrames = locker.GetDicom().GetFramesCount(); |
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563 } |
|
1950
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564 |
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565 Json::Value result = Json::arrayValue; |
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566 for (unsigned int i = 0; i < numberOfFrames; i++) |
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567 { |
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568 result.append(i); |
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569 } |
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570 |
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571 call.GetOutput().AnswerJson(result); |
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572 } |
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573 |
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574 |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
changeset
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575 namespace |
|
1781
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576 { |
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577 class ImageToEncode |
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578 { |
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579 private: |
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580 std::unique_ptr<ImageAccessor>& image_; |
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581 ImageExtractionMode mode_; |
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582 bool invert_; |
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583 MimeType format_; |
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584 std::string answer_; |
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585 |
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586 public: |
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587 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
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588 ImageExtractionMode mode, |
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589 bool invert) : |
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590 image_(image), |
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591 mode_(mode), |
| 4205 | 592 invert_(invert), |
| 593 format_(MimeType_Binary) | |
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594 { |
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595 } |
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596 |
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597 void Answer(RestApiOutput& output) |
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598 { |
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599 output.AnswerBuffer(answer_, format_); |
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600 } |
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601 |
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602 void EncodeUsingPng() |
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603 { |
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604 format_ = MimeType_Png; |
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605 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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606 } |
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607 |
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608 void EncodeUsingPam() |
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609 { |
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610 format_ = MimeType_Pam; |
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611 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
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612 } |
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613 |
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614 void EncodeUsingJpeg(uint8_t quality) |
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615 { |
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616 format_ = MimeType_Jpeg; |
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617 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
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618 } |
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619 }; |
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620 |
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621 class EncodePng : public HttpContentNegociation::IHandler |
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622 { |
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623 private: |
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624 ImageToEncode& image_; |
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625 |
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626 public: |
| 4205 | 627 explicit EncodePng(ImageToEncode& image) : image_(image) |
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628 { |
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629 } |
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630 |
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631 virtual void Handle(const std::string& type, |
|
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632 const std::string& subtype, |
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633 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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634 { |
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635 assert(type == "image"); |
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636 assert(subtype == "png"); |
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637 image_.EncodeUsingPng(); |
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638 } |
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639 }; |
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640 |
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641 class EncodePam : public HttpContentNegociation::IHandler |
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642 { |
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643 private: |
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644 ImageToEncode& image_; |
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645 |
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646 public: |
| 4205 | 647 explicit EncodePam(ImageToEncode& image) : image_(image) |
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648 { |
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649 } |
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650 |
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651 virtual void Handle(const std::string& type, |
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652 const std::string& subtype, |
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653 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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654 { |
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655 assert(type == "image"); |
| 2780 | 656 assert(subtype == "x-portable-arbitrarymap"); |
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657 image_.EncodeUsingPam(); |
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658 } |
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659 }; |
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660 |
|
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661 class EncodeJpeg : public HttpContentNegociation::IHandler |
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662 { |
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663 private: |
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664 ImageToEncode& image_; |
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665 unsigned int quality_; |
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666 |
|
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667 public: |
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668 EncodeJpeg(ImageToEncode& image, |
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669 const RestApiGetCall& call) : |
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670 image_(image) |
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671 { |
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672 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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673 bool ok = false; |
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674 |
|
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675 try |
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676 { |
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677 quality_ = boost::lexical_cast<unsigned int>(v); |
| 1847 | 678 ok = (quality_ >= 1 && quality_ <= 100); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
679 } |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
changeset
|
680 catch (boost::bad_lexical_cast&) |
|
2dbf25006f88
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681 { |
|
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diff
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682 } |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
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|
683 |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
684 if (!ok) |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
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|
685 { |
| 2955 | 686 throw OrthancException( |
| 687 ErrorCode_BadRequest, | |
| 688 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
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|
689 } |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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690 } |
|
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diff
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|
691 |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
692 virtual void Handle(const std::string& type, |
|
5338
78c59b02b121
accept parameters are now provided to HttpContentNegociation::IHandler::Handle()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5275
diff
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|
693 const std::string& subtype, |
|
78c59b02b121
accept parameters are now provided to HttpContentNegociation::IHandler::Handle()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
694 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
|
1784
2dbf25006f88
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parents:
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diff
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|
695 { |
|
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|
696 assert(type == "image"); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
697 assert(subtype == "jpeg"); |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
698 image_.EncodeUsingJpeg(quality_); |
|
1784
2dbf25006f88
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diff
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|
699 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
700 }; |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
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1773
diff
changeset
|
701 } |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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1773
diff
changeset
|
702 |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
703 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
704 namespace |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
705 { |
|
3683
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|
706 class IDecodedFrameHandler : public boost::noncopyable |
|
12253ddefe5a
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diff
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707 { |
|
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diff
changeset
|
708 public: |
|
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diff
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|
709 virtual ~IDecodedFrameHandler() |
|
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skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
710 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
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|
711 } |
|
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diff
changeset
|
712 |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
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|
713 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
|
3683
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
714 virtual void Handle(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
715 std::unique_ptr<ImageAccessor>& decoded, |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
716 const ParsedDicomFile* dicom, |
|
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
717 unsigned int frame) = 0; |
|
3683
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diff
changeset
|
718 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
719 virtual bool RequiresDicomTags() const = 0; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
720 |
|
12253ddefe5a
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parents:
3640
diff
changeset
|
721 static void Apply(RestApiGetCall& call, |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
722 IDecodedFrameHandler& handler, |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
723 ImageExtractionMode mode /* for generation of documentation */, |
|
4cb9f66a1c7c
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diff
changeset
|
724 bool isRendered /* for generation of documentation */) |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
725 { |
|
4406
4cb9f66a1c7c
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parents:
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diff
changeset
|
726 if (call.IsDocumentation()) |
|
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
727 { |
|
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parents:
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diff
changeset
|
728 std::string m; |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
729 if (!isRendered) |
|
4cb9f66a1c7c
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diff
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|
730 { |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
731 switch (mode) |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
732 { |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
733 case ImageExtractionMode_Preview: |
|
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parents:
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diff
changeset
|
734 m = "preview"; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
735 break; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
736 case ImageExtractionMode_UInt8: |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
737 m = "uint8"; |
|
4cb9f66a1c7c
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diff
changeset
|
738 break; |
|
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parents:
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diff
changeset
|
739 case ImageExtractionMode_UInt16: |
|
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parents:
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diff
changeset
|
740 m = "uint16"; |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
741 break; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
742 case ImageExtractionMode_Int16: |
|
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documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
743 m = "int16"; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
744 break; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
745 default: |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
746 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
747 } |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
748 } |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
749 |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
750 std::string description; |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
751 std::string verb = (isRendered ? "Render" : "Decode"); |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
752 |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
753 if (call.HasUriComponent("frame")) |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
754 { |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
755 description = verb + " one frame of interest from the given DICOM instance."; |
|
4cb9f66a1c7c
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diff
changeset
|
756 call.GetDocumentation() |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
757 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
758 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
759 } |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
760 else |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
761 { |
|
4cb9f66a1c7c
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diff
changeset
|
762 description = verb + " the first frame of the given DICOM instance."; |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
763 call.GetDocumentation() |
|
4cb9f66a1c7c
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diff
changeset
|
764 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
|
4cb9f66a1c7c
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diff
changeset
|
765 } |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
766 |
|
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
767 if (isRendered) |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
768 { |
|
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diff
changeset
|
769 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
|
4cb9f66a1c7c
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diff
changeset
|
770 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
771 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
|
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diff
changeset
|
772 call.GetDocumentation() |
|
4cb9f66a1c7c
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diff
changeset
|
773 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
|
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
774 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
775 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
|
4cb9f66a1c7c
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diff
changeset
|
776 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
|
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diff
changeset
|
777 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
|
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diff
changeset
|
778 } |
|
4cb9f66a1c7c
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diff
changeset
|
779 else |
|
4cb9f66a1c7c
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4405
diff
changeset
|
780 { |
|
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diff
changeset
|
781 switch (mode) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
782 { |
|
4cb9f66a1c7c
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diff
changeset
|
783 case ImageExtractionMode_Preview: |
|
4cb9f66a1c7c
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diff
changeset
|
784 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
785 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
786 case ImageExtractionMode_UInt8: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
787 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
788 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
789 case ImageExtractionMode_UInt16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
790 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
791 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
792 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
793 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
794 "Negative values must be interpreted according to two's complement."); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
795 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
796 default: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
797 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
798 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
799 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
800 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
801 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
802 .SetTag("Instances") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
803 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
804 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
805 .SetHttpGetArgument("returnUnsupportedImage", RestApiCallDocumentation::Type_Boolean, "Returns an unsupported.png placeholder image if unable to provide the image instead of returning a 415 HTTP error (defaults to false)", false) |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
806 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
807 .AddAnswerType(MimeType_Png, "PNG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
808 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
809 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
810 .SetDescription(description); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
811 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
812 return; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
813 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
814 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
815 ServerContext& context = OrthancRestApi::GetContext(call); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
816 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
817 std::string frameId = call.GetUriComponent("frame", "0"); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
818 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
819 unsigned int frame; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
820 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
821 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
822 frame = boost::lexical_cast<unsigned int>(frameId); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
823 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
824 catch (boost::bad_lexical_cast&) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
825 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
826 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
827 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
828 |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
829 std::unique_ptr<ImageAccessor> decoded; |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
830 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
831 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
832 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
833 std::string publicId = call.GetUriComponent("id", ""); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
834 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
835 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
836 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
837 if (decoded.get() == NULL) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
838 { |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
839 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
840 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
841 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
842 |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
843 if (handler.RequiresDicomTags()) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
844 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
845 /** |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
846 * Retrieve a summary of the DICOM tags, which is |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
847 * necessary to deal with MONOCHROME1 photometric |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
848 * interpretation, and with windowing parameters. |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
849 **/ |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
850 ServerContext::DicomCacheLocker locker(context, publicId); |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
851 handler.Handle(call, decoded, &locker.GetDicom(), frame); |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
852 } |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
853 else |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
854 { |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
855 handler.Handle(call, decoded, NULL, frame); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
856 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
857 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
858 catch (OrthancException& e) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
859 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
860 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
861 e.GetErrorCode() == ErrorCode_UnknownResource) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
862 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
863 // The frame number is out of the range for this DICOM |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
864 // instance, the resource is not existent |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
865 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
866 else |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
867 { |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
868 if (call.HasArgument("returnUnsupportedImage")) |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
869 { |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
870 std::string root = ""; |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
871 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
872 { |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
873 root += "../"; |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
874 } |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
875 |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
876 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
877 } |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
878 else |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
879 { |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
880 call.GetOutput().SignalError(HttpStatus_415_UnsupportedMediaType); |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
881 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
882 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
883 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
884 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
885 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
886 } |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
887 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
888 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
889 static void DefaultHandler(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
890 std::unique_ptr<ImageAccessor>& decoded, |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
891 ImageExtractionMode mode, |
|
2cc34837d694
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|
892 bool invert) |
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|
893 { |
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894 ImageToEncode image(decoded, mode, invert); |
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895 |
|
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|
896 HttpContentNegociation negociation; |
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897 EncodePng png(image); |
|
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898 negociation.Register(MIME_PNG, png); |
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899 |
|
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900 EncodeJpeg jpeg(image, call); |
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901 negociation.Register(MIME_JPEG, jpeg); |
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902 |
|
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|
903 EncodePam pam(image); |
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|
904 negociation.Register(MIME_PAM, pam); |
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905 |
|
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906 if (negociation.Apply(call.GetHttpHeaders())) |
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907 { |
|
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908 image.Answer(call.GetOutput()); |
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909 } |
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|
910 } |
|
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911 }; |
|
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912 |
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913 |
|
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|
914 class GetImageHandler : public IDecodedFrameHandler |
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915 { |
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916 private: |
|
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917 ImageExtractionMode mode_; |
|
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918 |
|
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919 public: |
| 4205 | 920 explicit GetImageHandler(ImageExtractionMode mode) : |
|
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921 mode_(mode) |
|
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922 { |
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923 } |
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924 |
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|
925 virtual void Handle(RestApiGetCall& call, |
|
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|
926 std::unique_ptr<ImageAccessor>& decoded, |
|
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927 const ParsedDicomFile* dicom, |
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928 unsigned int frame) ORTHANC_OVERRIDE |
|
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929 { |
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930 bool invert = false; |
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931 |
|
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|
932 if (mode_ == ImageExtractionMode_Preview) |
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933 { |
|
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934 if (dicom == NULL) |
|
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|
935 { |
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|
936 throw OrthancException(ErrorCode_InternalError); |
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|
937 } |
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|
938 |
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939 DicomMap tags; |
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|
940 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
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941 |
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|
942 DicomImageInformation info(tags); |
|
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943 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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944 } |
|
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|
945 |
|
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|
946 DefaultHandler(call, decoded, mode_, invert); |
|
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947 } |
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948 |
|
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|
949 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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950 { |
|
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951 return mode_ == ImageExtractionMode_Preview; |
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952 } |
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|
953 }; |
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|
954 |
|
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|
955 |
|
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|
956 class RenderedFrameHandler : public IDecodedFrameHandler |
|
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|
957 { |
|
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|
958 private: |
|
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|
959 static void GetUserArguments(double& windowWidth /* inout */, |
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|
960 double& windowCenter /* inout */, |
|
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|
961 unsigned int& argWidth, |
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|
962 unsigned int& argHeight, |
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|
963 bool& smooth, |
| 4205 | 964 const RestApiGetCall& call) |
|
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|
965 { |
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|
966 static const char* ARG_WINDOW_CENTER = "window-center"; |
|
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967 static const char* ARG_WINDOW_WIDTH = "window-width"; |
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968 static const char* ARG_WIDTH = "width"; |
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|
969 static const char* ARG_HEIGHT = "height"; |
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970 static const char* ARG_SMOOTH = "smooth"; |
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|
971 |
|
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|
972 if (call.HasArgument(ARG_WINDOW_WIDTH) && |
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|
973 !SerializationToolbox::ParseDouble(windowWidth, call.GetArgument(ARG_WINDOW_WIDTH, ""))) |
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|
974 { |
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|
975 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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|
976 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
|
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977 } |
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|
978 |
|
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|
979 if (call.HasArgument(ARG_WINDOW_CENTER) && |
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|
980 !SerializationToolbox::ParseDouble(windowCenter, call.GetArgument(ARG_WINDOW_CENTER, ""))) |
|
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|
981 { |
|
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|
982 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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|
983 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
|
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|
984 } |
|
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|
985 |
|
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|
986 argWidth = 0; |
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|
987 argHeight = 0; |
|
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|
988 |
|
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|
989 if (call.HasArgument(ARG_WIDTH)) |
|
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|
990 { |
|
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|
991 try |
|
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|
992 { |
|
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changeset
|
993 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
|
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changeset
|
994 if (tmp < 0) |
|
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|
995 { |
|
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|
996 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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|
997 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
|
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|
998 } |
|
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|
999 else |
|
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diff
changeset
|
1000 { |
|
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|
1001 argWidth = static_cast<unsigned int>(tmp); |
|
3685
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|
1002 } |
|
2cc34837d694
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diff
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|
1003 } |
|
2cc34837d694
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|
1004 catch (boost::bad_lexical_cast&) |
|
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|
1005 { |
|
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diff
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|
1006 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1007 "Bad value for argument: " + std::string(ARG_WIDTH)); |
|
3685
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diff
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|
1008 } |
|
3683
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1009 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1010 |
|
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|
1011 if (call.HasArgument(ARG_HEIGHT)) |
|
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|
1012 { |
|
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|
1013 try |
|
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diff
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|
1014 { |
|
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|
1015 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
|
3685
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|
1016 if (tmp < 0) |
|
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|
1017 { |
|
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|
1018 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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|
1019 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
|
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|
1020 } |
|
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|
1021 else |
|
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|
1022 { |
|
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|
1023 argHeight = static_cast<unsigned int>(tmp); |
|
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|
1024 } |
|
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|
1025 } |
|
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|
1026 catch (boost::bad_lexical_cast&) |
|
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|
1027 { |
|
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|
1028 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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|
1029 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
|
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|
1030 } |
|
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|
1031 } |
|
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|
1032 |
|
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|
1033 smooth = false; |
|
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1034 |
|
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|
1035 if (call.HasArgument(ARG_SMOOTH)) |
|
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|
1036 { |
|
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4460
diff
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|
1037 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
|
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|
1038 } |
|
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|
1039 } |
|
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|
1040 |
|
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|
1041 |
|
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|
1042 public: |
|
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|
1043 virtual void Handle(RestApiGetCall& call, |
|
3712
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replacing std::auto_ptr by std::unique_ptr
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|
1044 std::unique_ptr<ImageAccessor>& decoded, |
|
4777
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
1045 const ParsedDicomFile* dicom, |
|
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Support detection of windowing and rescale in Philips multiframe images
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|
1046 unsigned int frame) ORTHANC_OVERRIDE |
|
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|
1047 { |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1048 if (dicom == NULL) |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1049 { |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1050 throw OrthancException(ErrorCode_InternalError); |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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diff
changeset
|
1051 } |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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4722
diff
changeset
|
1052 |
|
4777
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1053 PhotometricInterpretation photometric; |
|
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Support detection of windowing and rescale in Philips multiframe images
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diff
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|
1054 const bool invert = (dicom->LookupPhotometricInterpretation(photometric) && |
|
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Support detection of windowing and rescale in Philips multiframe images
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diff
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|
1055 photometric == PhotometricInterpretation_Monochrome1); |
|
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1056 |
|
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
1057 double rescaleIntercept, rescaleSlope, windowCenter, windowWidth; |
|
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1058 dicom->GetRescale(rescaleIntercept, rescaleSlope, frame); |
|
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
1059 dicom->GetDefaultWindowing(windowCenter, windowWidth, frame); |
|
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1060 |
|
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changeset
|
1061 unsigned int argWidth, argHeight; |
|
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changeset
|
1062 bool smooth; |
|
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|
1063 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
|
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|
1064 |
|
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changeset
|
1065 unsigned int targetWidth = decoded->GetWidth(); |
|
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changeset
|
1066 unsigned int targetHeight = decoded->GetHeight(); |
| 3686 | 1067 |
| 1068 if (decoded->GetWidth() != 0 && | |
| 1069 decoded->GetHeight() != 0) | |
| 1070 { | |
| 1071 float ratio = 1; | |
| 1072 | |
|
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changeset
|
1073 if (argWidth != 0 && |
|
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changeset
|
1074 argHeight != 0) |
| 3686 | 1075 { |
|
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changeset
|
1076 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
|
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|
1077 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
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changeset
|
1078 ratio = std::min(ratioX, ratioY); |
| 3686 | 1079 } |
|
3690
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|
1080 else if (argWidth != 0) |
| 3686 | 1081 { |
|
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changeset
|
1082 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
| 3686 | 1083 } |
|
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changeset
|
1084 else if (argHeight != 0) |
|
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changeset
|
1085 { |
|
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changeset
|
1086 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
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changeset
|
1087 } |
|
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changeset
|
1088 |
|
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changeset
|
1089 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
|
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changeset
|
1090 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
| 3686 | 1091 } |
| 1092 | |
|
5054
255b02c68908
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
5048
diff
changeset
|
1093 if (decoded->GetFormat() == PixelFormat_RGB24 || decoded->GetFormat() == PixelFormat_RGB48) |
|
3685
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changeset
|
1094 { |
|
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changeset
|
1095 if (targetWidth == decoded->GetWidth() && |
|
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changeset
|
1096 targetHeight == decoded->GetHeight()) |
|
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changeset
|
1097 { |
|
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changeset
|
1098 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
|
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|
1099 } |
|
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changeset
|
1100 else |
|
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changeset
|
1101 { |
|
3712
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replacing std::auto_ptr by std::unique_ptr
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diff
changeset
|
1102 std::unique_ptr<ImageAccessor> resized( |
|
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diff
changeset
|
1103 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
|
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changeset
|
1104 |
|
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changeset
|
1105 if (smooth && |
|
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changeset
|
1106 (targetWidth < decoded->GetWidth() || |
|
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changeset
|
1107 targetHeight < decoded->GetHeight())) |
|
3685
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changeset
|
1108 { |
|
4065
d6362b2c4b61
export dcmdata in shared library, rounding in convolution tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4055
diff
changeset
|
1109 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
|
3685
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1110 } |
|
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|
1111 |
|
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|
1112 ImageProcessing::Resize(*resized, *decoded); |
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|
1113 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
|
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1114 } |
|
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1115 } |
| 3686 | 1116 else |
| 1117 { | |
|
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1118 // Grayscale image: (1) convert to Float32, (2) apply |
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1119 // windowing to get a Grayscale8, (3) possibly resize |
|
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1120 |
|
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1121 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
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1122 ImageProcessing::Convert(converted, *decoded); |
|
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1123 |
|
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1124 // Avoid divisions by zero |
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1125 if (windowWidth <= 1.0f) |
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1126 { |
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1127 windowWidth = 1; |
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1128 } |
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1129 |
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1130 if (std::abs(rescaleSlope) <= 0.0001) |
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1131 { |
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1132 rescaleSlope = 0.0001; |
|
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1133 } |
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1134 |
|
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1135 const double scaling = 255.0 * rescaleSlope / windowWidth; |
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1136 const double offset = (rescaleIntercept - windowCenter + windowWidth / 2.0) / rescaleSlope; |
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1137 |
|
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1138 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
|
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1139 ImageProcessing::ShiftScale(*rescaled, converted, static_cast<float>(offset), static_cast<float>(scaling), false); |
|
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1140 |
|
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1141 if (targetWidth == decoded->GetWidth() && |
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1142 targetHeight == decoded->GetHeight()) |
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1143 { |
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1144 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
|
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1145 } |
|
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1146 else |
|
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1147 { |
|
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1148 std::unique_ptr<ImageAccessor> resized( |
|
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1149 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
|
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1150 |
|
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1151 if (smooth && |
|
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1152 (targetWidth < decoded->GetWidth() || |
|
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1153 targetHeight < decoded->GetHeight())) |
|
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|
1154 { |
|
4065
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1155 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
|
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1156 } |
|
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|
1157 |
|
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1158 ImageProcessing::Resize(*resized, *rescaled); |
|
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1159 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
|
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1160 } |
| 3686 | 1161 } |
|
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1162 } |
|
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1163 |
|
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1164 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
|
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1165 { |
|
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1166 return true; |
|
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1167 } |
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1168 }; |
|
3600
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|
1169 } |
|
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|
1170 |
|
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|
1171 |
|
751
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|
1172 template <enum ImageExtractionMode mode> |
| 974 | 1173 static void GetImage(RestApiGetCall& call) |
|
751
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1174 { |
|
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|
1175 Semaphore::Locker locker(throttlingSemaphore_); |
|
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|
1176 |
|
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|
1177 GetImageHandler handler(mode); |
|
4406
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1178 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
|
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1179 } |
|
1906
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1180 |
|
1826
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1181 |
|
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1182 static void GetRenderedFrame(RestApiGetCall& call) |
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1183 { |
|
3926
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1184 Semaphore::Locker locker(throttlingSemaphore_); |
|
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1185 |
|
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|
1186 RenderedFrameHandler handler; |
|
4406
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|
1187 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
|
751
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1188 } |
|
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|
1189 |
|
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1190 |
|
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1191 static void DocumentSharedNumpy(RestApiGetCall& call) |
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1192 { |
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1193 call.GetDocumentation() |
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1194 .SetUriArgument("id", "Orthanc identifier of the DICOM resource of interest") |
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1195 .SetHttpGetArgument("compress", RestApiCallDocumentation::Type_Boolean, "Compress the file as `.npz`", false) |
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1196 .SetHttpGetArgument("rescale", RestApiCallDocumentation::Type_Boolean, |
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1197 "On grayscale images, apply the rescaling and return floating-point values", false) |
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1198 .AddAnswerType(MimeType_PlainText, "Numpy file: https://numpy.org/devdocs/reference/generated/numpy.lib.format.html"); |
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1199 } |
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1200 |
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1201 |
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1202 namespace |
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1203 { |
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1204 class NumpyVisitor : public boost::noncopyable |
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1205 { |
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1206 private: |
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1207 bool rescale_; |
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1208 unsigned int depth_; |
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1209 unsigned int currentDepth_; |
| 4858 | 1210 unsigned int width_; |
|
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1211 unsigned int height_; |
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1212 PixelFormat format_; |
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1213 ChunkedBuffer buffer_; |
|
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1214 |
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1215 public: |
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1216 NumpyVisitor(unsigned int depth /* can be zero if 2D frame */, |
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1217 bool rescale) : |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1218 rescale_(rescale), |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1219 depth_(depth), |
| 4858 | 1220 currentDepth_(0), |
| 1221 width_(0), // dummy initialization | |
| 1222 height_(0), // dummy initialization | |
| 1223 format_(PixelFormat_Grayscale8) // dummy initialization | |
|
4834
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1224 { |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1225 } |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1226 |
| 4858 | 1227 void WriteFrame(const ParsedDicomFile& dicom, |
|
4834
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1228 unsigned int frame) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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1229 { |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1230 std::unique_ptr<ImageAccessor> decoded(dicom.DecodeFrame(frame)); |
|
bec432ee1094
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|
1231 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1232 if (decoded.get() == NULL) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1233 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1234 throw OrthancException(ErrorCode_NotImplemented, "Cannot decode DICOM instance"); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1235 } |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1236 |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1237 if (currentDepth_ == 0) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1238 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1239 width_ = decoded->GetWidth(); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1240 height_ = decoded->GetHeight(); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1241 format_ = decoded->GetFormat(); |
|
bec432ee1094
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|
1242 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1243 else if (width_ != decoded->GetWidth() || |
|
bec432ee1094
download of numpy arrays from the REST API
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|
1244 height_ != decoded->GetHeight()) |
|
bec432ee1094
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|
1245 { |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1246 throw OrthancException(ErrorCode_IncompatibleImageSize, "The size of the frames varies across the instance(s)"); |
|
bec432ee1094
download of numpy arrays from the REST API
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1247 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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1248 else if (format_ != decoded->GetFormat()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1249 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1250 throw OrthancException(ErrorCode_IncompatibleImageFormat, "The pixel format of the frames varies across the instance(s)"); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1251 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1252 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1253 if (rescale_ && |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1254 decoded->GetFormat() != PixelFormat_RGB24) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1255 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1256 if (currentDepth_ == 0) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1257 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1258 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, PixelFormat_Float32); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1259 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1260 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1261 double rescaleIntercept, rescaleSlope; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1262 dicom.GetRescale(rescaleIntercept, rescaleSlope, frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1263 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
1264 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1265 ImageProcessing::Convert(converted, *decoded); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1266 ImageProcessing::ShiftScale2(converted, static_cast<float>(rescaleIntercept), static_cast<float>(rescaleSlope), false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1267 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
1268 NumpyWriter::WritePixels(buffer_, converted); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1269 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1270 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1271 { |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1272 if (currentDepth_ == 0) |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1273 { |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1274 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, format_); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1275 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1276 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1277 NumpyWriter::WritePixels(buffer_, *decoded); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1278 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1279 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1280 currentDepth_ ++; |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1281 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1282 |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1283 void Answer(RestApiOutput& output, |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1284 bool compress) |
|
bec432ee1094
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|
1285 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1286 if ((depth_ == 0 && currentDepth_ != 1) || |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1287 (depth_ != 0 && currentDepth_ != depth_)) |
|
bec432ee1094
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changeset
|
1288 { |
|
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|
1289 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
|
bec432ee1094
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|
1290 } |
|
bec432ee1094
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|
1291 else |
|
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|
1292 { |
|
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|
1293 std::string answer; |
|
bec432ee1094
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changeset
|
1294 NumpyWriter::Finalize(answer, buffer_, compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
1295 output.AnswerBuffer(answer, MimeType_Binary); |
|
bec432ee1094
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|
1296 } |
|
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|
1297 } |
|
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|
1298 }; |
|
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download of numpy arrays from the REST API
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|
1299 } |
|
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|
1300 |
|
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|
1301 |
|
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|
1302 static void GetNumpyFrame(RestApiGetCall& call) |
|
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1303 { |
|
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1304 if (call.IsDocumentation()) |
|
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1305 { |
|
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|
1306 DocumentSharedNumpy(call); |
|
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1307 call.GetDocumentation() |
|
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1308 .SetTag("Instances") |
|
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1309 .SetSummary("Decode frame for numpy") |
|
4836
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1310 .SetDescription("Decode one frame of interest from the given DICOM instance, for use with numpy in Python. " |
|
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1311 "The numpy array has 3 dimensions: (height, width, color channel).") |
|
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1312 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
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1313 } |
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1314 else |
|
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1315 { |
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|
1316 const std::string instanceId = call.GetUriComponent("id", ""); |
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1317 const bool compress = call.GetBooleanArgument("compress", false); |
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1318 const bool rescale = call.GetBooleanArgument("rescale", true); |
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1319 |
|
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|
1320 uint32_t frame; |
|
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1321 if (!SerializationToolbox::ParseUnsignedInteger32(frame, call.GetUriComponent("frame", "0"))) |
|
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1322 { |
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|
1323 throw OrthancException(ErrorCode_ParameterOutOfRange, "Expected an unsigned integer for the \"frame\" argument"); |
|
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1324 } |
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1325 |
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|
1326 NumpyVisitor visitor(0 /* no depth, 2D frame */, rescale); |
|
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1327 |
|
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1328 { |
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1329 Semaphore::Locker throttling(throttlingSemaphore_); |
|
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|
1330 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
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1331 |
|
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|
1332 visitor.WriteFrame(locker.GetDicom(), frame); |
|
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|
1333 } |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1334 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1335 visitor.Answer(call.GetOutput(), compress); |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1336 } |
|
bec432ee1094
download of numpy arrays from the REST API
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|
1337 } |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1338 |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1339 |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1340 static void GetNumpyInstance(RestApiGetCall& call) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1341 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1342 if (call.IsDocumentation()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1343 { |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1344 DocumentSharedNumpy(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1345 call.GetDocumentation() |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1346 .SetTag("Instances") |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1347 .SetSummary("Decode instance for numpy") |
|
4836
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1348 .SetDescription("Decode the given DICOM instance, for use with numpy in Python. " |
|
ec1e9571b645
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1349 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
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1350 } |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1351 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1352 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1353 const std::string instanceId = call.GetUriComponent("id", ""); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1354 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1355 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1356 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1357 { |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1358 Semaphore::Locker throttling(throttlingSemaphore_); |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1359 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1360 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1361 const unsigned int depth = locker.GetDicom().GetFramesCount(); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1362 if (depth == 0) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1363 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1364 throw OrthancException(ErrorCode_BadFileFormat, "Empty DICOM instance"); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1365 } |
|
bec432ee1094
download of numpy arrays from the REST API
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|
1366 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1367 NumpyVisitor visitor(depth, rescale); |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1368 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1369 for (unsigned int frame = 0; frame < depth; frame++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1370 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1371 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
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|
1372 } |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1373 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1374 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1375 } |
|
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download of numpy arrays from the REST API
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|
1376 } |
|
bec432ee1094
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|
1377 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1378 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1379 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1380 static void GetNumpySeries(RestApiGetCall& call) |
|
bec432ee1094
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|
1381 { |
|
bec432ee1094
download of numpy arrays from the REST API
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|
1382 if (call.IsDocumentation()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1383 { |
|
bec432ee1094
download of numpy arrays from the REST API
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parents:
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|
1384 DocumentSharedNumpy(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1385 call.GetDocumentation() |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1386 .SetTag("Series") |
|
bec432ee1094
download of numpy arrays from the REST API
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changeset
|
1387 .SetSummary("Decode series for numpy") |
|
4836
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|
1388 .SetDescription("Decode the given DICOM series, for use with numpy in Python. " |
|
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1389 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
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|
1390 } |
|
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|
1391 else |
|
bec432ee1094
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|
1392 { |
|
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diff
changeset
|
1393 const std::string seriesId = call.GetUriComponent("id", ""); |
|
bec432ee1094
download of numpy arrays from the REST API
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|
1394 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
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|
1395 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1396 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1397 Semaphore::Locker throttling(throttlingSemaphore_); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1398 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1399 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1400 SliceOrdering ordering(index, seriesId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1401 |
|
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download of numpy arrays from the REST API
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|
1402 unsigned int depth = 0; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1403 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
bec432ee1094
download of numpy arrays from the REST API
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|
1404 { |
|
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download of numpy arrays from the REST API
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|
1405 depth += ordering.GetFramesCount(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1406 } |
|
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download of numpy arrays from the REST API
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changeset
|
1407 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1408 ServerContext& context = OrthancRestApi::GetContext(call); |
|
bec432ee1094
download of numpy arrays from the REST API
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|
1409 |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1410 NumpyVisitor visitor(depth, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1411 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
1412 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1413 { |
|
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diff
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|
1414 const std::string& instanceId = ordering.GetInstanceId(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
1415 unsigned int framesCount = ordering.GetFramesCount(i); |
|
bec432ee1094
download of numpy arrays from the REST API
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diff
changeset
|
1416 |
|
bec432ee1094
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changeset
|
1417 { |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
1418 ServerContext::DicomCacheLocker locker(context, instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1419 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1420 for (unsigned int frame = 0; frame < framesCount; frame++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1421 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1422 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1423 } |
|
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|
1424 } |
|
bec432ee1094
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|
1425 } |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1426 |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
1427 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
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changeset
|
1428 } |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1429 } |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1430 |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1431 |
| 974 | 1432 static void GetMatlabImage(RestApiGetCall& call) |
|
874
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1433 { |
| 4414 | 1434 if (call.IsDocumentation()) |
| 1435 { | |
| 1436 std::string description; | |
| 1437 | |
| 1438 if (call.HasUriComponent("frame")) | |
| 1439 { | |
| 1440 description = "Decode one frame of interest from the given DICOM instance"; | |
| 1441 call.GetDocumentation() | |
| 1442 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
| 1443 } | |
| 1444 else | |
| 1445 { | |
| 1446 description = "Decode the first frame of the given DICOM instance."; | |
| 1447 } | |
| 1448 | |
| 1449 call.GetDocumentation() | |
| 1450 .SetTag("Instances") | |
| 1451 .SetSummary("Decode frame for Matlab") | |
| 1452 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
1453 "https://orthanc.uclouvain.be/book/faq/matlab.html") |
| 4414 | 1454 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
| 1455 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
| 1456 return; | |
| 1457 } | |
| 1458 | |
|
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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3816
diff
changeset
|
1459 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1460 |
|
874
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1461 ServerContext& context = OrthancRestApi::GetContext(call); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1462 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1463 std::string frameId = call.GetUriComponent("frame", "0"); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1464 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1465 unsigned int frame; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1466 try |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1467 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1468 frame = boost::lexical_cast<unsigned int>(frameId); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1469 } |
|
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2804
diff
changeset
|
1470 catch (boost::bad_lexical_cast&) |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1471 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1472 return; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1473 } |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1474 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1475 std::string publicId = call.GetUriComponent("id", ""); |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1476 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1477 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1478 if (decoded.get() == NULL) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1479 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1480 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1481 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1482 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1483 else |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1484 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1485 std::string result; |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1486 decoded->ToMatlabString(result); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1487 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1488 } |
|
874
87791ebc1f50
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diff
changeset
|
1489 } |
|
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1490 |
|
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1491 |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1492 template <bool GzipCompression> |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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|
1493 static void GetRawFrame(RestApiGetCall& call) |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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|
1494 { |
| 4408 | 1495 if (call.IsDocumentation()) |
| 1496 { | |
| 1497 call.GetDocumentation() | |
| 1498 .SetTag("Instances") | |
| 1499 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
| 1500 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
| 1501 "bypassing image decoding. This is notably useful to access the source files " | |
| 1502 "in compressed transfer syntaxes." + | |
| 1503 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
|
4424
83371ccdfe80
openapi documentation is now completed
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diff
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|
1504 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
| 4408 | 1505 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
| 1506 | |
| 1507 if (GzipCompression) | |
| 1508 { | |
| 1509 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
| 1510 } | |
| 1511 else | |
| 1512 { | |
| 1513 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
| 1514 } | |
| 1515 return; | |
| 1516 } | |
| 1517 | |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1518 std::string frameId = call.GetUriComponent("frame", "0"); |
|
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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|
1519 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1520 unsigned int frame; |
|
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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|
1521 try |
|
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1522 { |
|
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diff
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|
1523 frame = boost::lexical_cast<unsigned int>(frameId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1524 } |
|
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fix Debian warnings
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diff
changeset
|
1525 catch (boost::bad_lexical_cast&) |
|
1924
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1526 { |
|
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1527 return; |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1528 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1529 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1530 std::string publicId = call.GetUriComponent("id", ""); |
|
2908
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new enumeration: MimeType
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diff
changeset
|
1531 std::string raw; |
|
9d277f8ad698
new enumeration: MimeType
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diff
changeset
|
1532 MimeType mime; |
|
1924
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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|
1533 |
|
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1534 { |
|
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1535 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1536 locker.GetDicom().GetRawFrame(raw, mime, frame); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1537 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1538 |
|
2408
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New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1539 if (GzipCompression) |
|
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New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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changeset
|
1540 { |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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changeset
|
1541 GzipCompressor gzip; |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1542 std::string compressed; |
|
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diff
changeset
|
1543 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
|
2908
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new enumeration: MimeType
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diff
changeset
|
1544 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1545 } |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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changeset
|
1546 else |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1547 { |
|
26a0cc24d48d
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diff
changeset
|
1548 call.GetOutput().AnswerBuffer(raw, mime); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1549 } |
|
1924
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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|
1550 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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|
1551 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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|
1552 |
| 974 | 1553 static void GetResourceStatistics(RestApiGetCall& call) |
|
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|
1554 { |
| 4418 | 1555 if (call.IsDocumentation()) |
| 1556 { | |
| 1557 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1558 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1559 call.GetDocumentation() | |
| 1560 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1561 .SetSummary("Get " + r + " statistics") | |
| 1562 .SetDescription("Get statistics about the given " + r) | |
| 1563 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1564 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
| 1565 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1566 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1567 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
| 1568 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1569 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1570 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1571 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
| 1572 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
| 1573 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
| 1574 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1575 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1576 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1577 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1578 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1579 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1580 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1581 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
| 1582 | |
| 1583 switch (t) | |
| 1584 { | |
| 1585 // Do NOT add "break" below this point! | |
| 1586 case ResourceType_Patient: | |
| 1587 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
| 1588 "Number of child studies within this " + r); | |
| 1589 | |
| 1590 case ResourceType_Study: | |
| 1591 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
| 1592 "Number of child series within this " + r); | |
| 1593 | |
| 1594 case ResourceType_Series: | |
| 1595 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
| 1596 "Number of child instances within this " + r); | |
| 1597 | |
| 1598 case ResourceType_Instance: | |
| 1599 default: | |
| 1600 break; | |
| 1601 } | |
| 1602 | |
| 1603 return; | |
| 1604 } | |
| 1605 | |
|
3174
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|
1606 static const uint64_t MEGA_BYTES = 1024 * 1024; |
|
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|
1607 |
|
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|
1608 std::string publicId = call.GetUriComponent("id", ""); |
|
3174
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|
1609 |
|
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|
1610 ResourceType type; |
|
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|
1611 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
|
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|
1612 unsigned int countStudies, countSeries, countInstances; |
|
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|
1613 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
|
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|
1614 type, diskSize, uncompressedSize, countStudies, countSeries, |
|
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|
1615 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
|
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|
1616 |
|
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|
1617 Json::Value result = Json::objectValue; |
|
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|
1618 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
|
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|
1619 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
|
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|
1620 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
|
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|
1621 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
|
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1622 |
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1623 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
|
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1624 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1625 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
|
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1626 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
|
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1627 |
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|
1628 switch (type) |
|
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1629 { |
|
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1630 // Do NOT add "break" below this point! |
|
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1631 case ResourceType_Patient: |
|
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|
1632 result["CountStudies"] = countStudies; |
|
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|
1633 |
|
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primitives to collect metrics in Orthanc
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|
1634 case ResourceType_Study: |
|
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primitives to collect metrics in Orthanc
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1635 result["CountSeries"] = countSeries; |
|
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1636 |
|
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|
1637 case ResourceType_Series: |
|
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1638 result["CountInstances"] = countInstances; |
|
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1639 |
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|
1640 case ResourceType_Instance: |
|
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|
1641 default: |
|
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|
1642 break; |
|
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1643 } |
|
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|
1644 |
|
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|
1645 call.GetOutput().AnswerJson(result); |
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1646 } |
|
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|
1647 |
|
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|
1648 |
|
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|
1649 |
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|
1650 // Handling of metadata ----------------------------------------------------- |
|
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|
1651 |
| 4205 | 1652 static void CheckValidResourceType(const RestApiCall& call) |
|
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|
1653 { |
|
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New metadata automatically computed at the series level: "RemoteAET"
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|
1654 assert(!call.GetFullUri().empty()); |
| 4409 | 1655 const std::string resourceType = call.GetFullUri() [0]; |
|
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|
1656 StringToResourceType(resourceType.c_str()); |
|
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|
1657 } |
|
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|
1658 |
|
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|
1659 |
| 974 | 1660 static void ListMetadata(RestApiGetCall& call) |
|
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|
1661 { |
| 4414 | 1662 if (call.IsDocumentation()) |
| 1663 { | |
| 1664 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1665 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1666 call.GetDocumentation() | |
| 1667 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1668 .SetSummary("List metadata") | |
| 1669 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
| 1670 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1671 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
| 1672 "If present, also retrieve the value of the individual metadata", false) | |
|
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|
1673 .SetHttpGetArgument("numeric", RestApiCallDocumentation::Type_String, |
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|
1674 "If present, use the numeric identifier of the metadata instead of its symbolic name", false) |
| 4414 | 1675 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " |
| 1676 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
| 1677 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
| 1678 return; | |
| 1679 } | |
| 1680 | |
|
4460
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1681 assert(!call.GetFullUri().empty()); |
| 4554 | 1682 const std::string publicId = call.GetUriComponent("id", ""); |
| 1683 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
|
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testing replay of transactions
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|
1684 |
|
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|
1685 typedef std::map<MetadataType, std::string> Metadata; |
|
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|
1686 |
|
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|
1687 Metadata metadata; |
| 4554 | 1688 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
|
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|
1689 |
|
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|
1690 Json::Value result; |
|
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|
1691 |
|
5274
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|
1692 bool isNumeric = call.HasArgument("numeric"); |
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|
1693 |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
1694 if (call.HasArgument("expand") && call.GetBooleanArgument("expand", true)) |
|
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|
1695 { |
|
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|
1696 result = Json::objectValue; |
|
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|
1697 |
|
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|
1698 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
|
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|
1699 { |
|
5274
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|
1700 std::string key; |
|
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|
1701 if (isNumeric) |
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|
1702 { |
|
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|
1703 key = boost::lexical_cast<std::string>(it->first); |
|
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|
1704 } |
|
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|
1705 else |
|
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|
1706 { |
|
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Added option "?numeric" if listing metadata
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|
1707 key = EnumerationToString(it->first); |
|
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Added option "?numeric" if listing metadata
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|
1708 } |
|
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Added option "?numeric" if listing metadata
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|
1709 |
|
3187
4bbadcd03966
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3174
diff
changeset
|
1710 result[key] = it->second; |
|
5274
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|
1711 } |
|
2726
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|
1712 } |
|
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|
1713 else |
|
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|
1714 { |
|
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|
1715 result = Json::arrayValue; |
|
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|
1716 |
|
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|
1717 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
|
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|
1718 { |
|
5274
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|
1719 if (isNumeric) |
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|
1720 { |
|
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|
1721 result.append(it->first); |
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|
1722 } |
|
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|
1723 else |
|
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|
1724 { |
|
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|
1725 result.append(EnumerationToString(it->first)); |
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|
1726 } |
|
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|
1727 } |
|
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|
1728 } |
|
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|
1729 |
|
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|
1730 call.GetOutput().AnswerJson(result); |
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|
1731 } |
|
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|
1732 |
|
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|
1733 |
| 4657 | 1734 static void SetStringContentETag(const RestApiOutput& output, |
| 1735 int64_t revision, | |
| 1736 const std::string& value) | |
|
4640
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|
1737 { |
|
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|
1738 std::string md5; |
|
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|
1739 Toolbox::ComputeMD5(md5, value); |
|
66109d24d26e
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changeset
|
1740 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
|
66109d24d26e
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|
1741 output.GetLowLevelOutput().AddHeader("ETag", etag); |
|
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|
1742 } |
|
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|
1743 |
|
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|
1744 |
| 4657 | 1745 static void SetBufferContentETag(const RestApiOutput& output, |
|
4640
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|
1746 int64_t revision, |
|
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changeset
|
1747 const void* data, |
|
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1748 size_t size) |
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1749 { |
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1750 std::string md5; |
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1751 Toolbox::ComputeMD5(md5, data, size); |
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1752 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1753 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1754 } |
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1755 |
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1756 |
| 4657 | 1757 static void SetAttachmentETag(const RestApiOutput& output, |
|
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1758 int64_t revision, |
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1759 const FileInfo& info) |
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1760 { |
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1761 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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1762 info.GetUncompressedMD5() + "\""); |
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1763 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1764 } |
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1765 |
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1766 |
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1767 static std::string GetMD5(const std::string& value) |
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1768 { |
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1769 std::string md5; |
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1770 Toolbox::ComputeMD5(md5, value); |
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1771 return md5; |
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1772 } |
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1773 |
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1774 |
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1775 static bool GetRevisionHeader(int64_t& revision /* out */, |
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1776 std::string& md5 /* out */, |
|
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1777 const RestApiCall& call, |
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1778 const std::string& header) |
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1779 { |
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1780 std::string lower; |
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1781 Toolbox::ToLowerCase(lower, header); |
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1782 |
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1783 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1784 if (found == call.GetHttpHeaders().end()) |
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1785 { |
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1786 return false; |
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1787 } |
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1788 else |
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1789 { |
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1790 std::string value = Toolbox::StripSpaces(found->second); |
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1791 Toolbox::RemoveSurroundingQuotes(value); |
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1792 |
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1793 try |
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1794 { |
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1795 size_t comma = value.find('-'); |
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1796 if (comma != std::string::npos) |
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1797 { |
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1798 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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1799 md5 = value.substr(comma + 1); |
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1800 return true; |
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1801 } |
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1802 } |
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1803 catch (boost::bad_lexical_cast&) |
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1804 { |
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1805 } |
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1806 |
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1807 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1808 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
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1809 } |
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1810 } |
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1811 |
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1812 |
| 974 | 1813 static void GetMetadata(RestApiGetCall& call) |
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1814 { |
| 4414 | 1815 if (call.IsDocumentation()) |
| 1816 { | |
| 1817 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1818 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1819 call.GetDocumentation() | |
| 1820 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1821 .SetSummary("Get metadata") | |
| 1822 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
| 1823 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1824 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1825 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1826 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1827 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4414 | 1828 return; |
| 1829 } | |
| 1830 | |
|
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1831 assert(!call.GetFullUri().empty()); |
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1832 const std::string publicId = call.GetUriComponent("id", ""); |
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1833 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1834 |
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1835 std::string name = call.GetUriComponent("name", ""); |
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1836 MetadataType metadata = StringToMetadata(name); |
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1837 |
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1838 std::string value; |
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1839 int64_t revision; |
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1840 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1841 { |
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1842 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
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1843 |
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1844 int64_t userRevision; |
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1845 std::string userMD5; |
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1846 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1847 userRevision == revision && |
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1848 userMD5 == GetMD5(value)) |
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1849 { |
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1850 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1851 } |
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1852 else |
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1853 { |
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1854 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1855 } |
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1856 } |
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1857 } |
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1858 |
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1859 |
| 974 | 1860 static void DeleteMetadata(RestApiDeleteCall& call) |
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1861 { |
| 4414 | 1862 if (call.IsDocumentation()) |
| 1863 { | |
| 1864 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1865 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1866 call.GetDocumentation() | |
| 1867 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1868 .SetSummary("Delete metadata") | |
| 1869 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
| 1870 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
| 1871 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
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1872 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
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1873 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
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1874 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4414 | 1875 return; |
| 1876 } | |
| 1877 | |
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1878 CheckValidResourceType(call); |
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1879 const std::string publicId = call.GetUriComponent("id", ""); |
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1880 |
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1881 std::string name = call.GetUriComponent("name", ""); |
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1882 MetadataType metadata = StringToMetadata(name); |
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1883 |
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1884 if (IsUserMetadata(metadata) || // It is forbidden to delete internal metadata... |
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1885 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
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1886 { |
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1887 bool found; |
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1888 int64_t revision; |
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1889 std::string md5; |
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1890 if (GetRevisionHeader(revision, md5, call, "if-match")) |
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1891 { |
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1892 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
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1893 } |
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1894 else |
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1895 { |
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1896 OrthancConfiguration::ReaderLock lock; |
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1897 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1898 { |
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1899 throw OrthancException(ErrorCode_Revision, |
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1900 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
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1901 } |
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1902 else |
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1903 { |
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1904 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
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1905 } |
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1906 } |
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1907 |
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1908 if (found) |
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1909 { |
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1910 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1911 } |
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1912 else |
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1913 { |
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1914 throw OrthancException(ErrorCode_UnknownResource); |
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1915 } |
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1916 } |
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1917 else |
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1918 { |
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1919 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1920 } |
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1921 } |
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1922 |
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1923 |
| 974 | 1924 static void SetMetadata(RestApiPutCall& call) |
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1925 { |
| 4414 | 1926 if (call.IsDocumentation()) |
| 1927 { | |
| 1928 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1929 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1930 call.GetDocumentation() | |
| 1931 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1932 .SetSummary("Set metadata") | |
| 1933 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
| 1934 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
| 1935 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1936 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
|
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1937 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
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1938 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
| 4414 | 1939 return; |
| 1940 } | |
| 1941 | |
|
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1942 CheckValidResourceType(call); |
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1943 |
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1944 std::string publicId = call.GetUriComponent("id", ""); |
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1945 std::string name = call.GetUriComponent("name", ""); |
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1946 MetadataType metadata = StringToMetadata(name); |
|
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1947 |
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1948 std::string value; |
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1949 call.BodyToString(value); |
|
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1950 |
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1951 if (IsUserMetadata(metadata) || // It is forbidden to modify internal metadata... |
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1952 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
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1953 { |
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1954 int64_t oldRevision; |
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1955 std::string oldMD5; |
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1956 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
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1957 |
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1958 if (!hasOldRevision) |
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1959 { |
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1960 OrthancConfiguration::ReaderLock lock; |
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1961 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1962 { |
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1963 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
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1964 // the actual value of "oldRevision" if the metadata is |
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1965 // inexistent as expected |
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1966 hasOldRevision = true; |
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1967 oldRevision = -1; // dummy value |
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1968 oldMD5.clear(); // dummy value |
|
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1969 } |
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1970 } |
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1971 |
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|
1972 int64_t newRevision; |
|
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1973 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
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1974 hasOldRevision, oldRevision, oldMD5); |
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1975 |
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1976 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
|
2908
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1977 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
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1978 } |
|
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1979 else |
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1980 { |
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|
1981 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1982 } |
|
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1983 } |
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|
1984 |
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|
1985 |
|
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|
1986 |
|
5221
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|
1987 // Handling of labels ------------------------------------------------------- |
|
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|
1988 |
|
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|
1989 static void ListLabels(RestApiGetCall& call) |
|
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1990 { |
|
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1991 if (call.IsDocumentation()) |
|
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1992 { |
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1993 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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1994 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
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|
1995 call.GetDocumentation() |
|
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|
1996 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
5275
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1997 .SetSummary("List labels") |
|
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1998 .SetDescription("Get the labels that are associated with the given " + r + " (new in Orthanc 1.12.0)") |
|
5221
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1999 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
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2000 .AddAnswerType(MimeType_Json, "JSON array containing the names of the labels") |
|
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|
2001 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/labels", true); |
|
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|
2002 return; |
|
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|
2003 } |
|
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diff
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|
2004 |
|
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parents:
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diff
changeset
|
2005 assert(!call.GetFullUri().empty()); |
|
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parents:
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diff
changeset
|
2006 const std::string publicId = call.GetUriComponent("id", ""); |
|
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parents:
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diff
changeset
|
2007 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
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parents:
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diff
changeset
|
2008 |
|
d0f7c742d397
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parents:
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diff
changeset
|
2009 std::set<std::string> labels; |
|
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parents:
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diff
changeset
|
2010 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
|
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parents:
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diff
changeset
|
2011 |
|
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parents:
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diff
changeset
|
2012 Json::Value result = Json::arrayValue; |
|
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parents:
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diff
changeset
|
2013 |
|
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2014 for (std::set<std::string>::const_iterator it = labels.begin(); it != labels.end(); ++it) |
|
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parents:
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diff
changeset
|
2015 { |
|
d0f7c742d397
started implementation of labels
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parents:
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diff
changeset
|
2016 result.append(*it); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2017 } |
|
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2018 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2019 call.GetOutput().AnswerJson(result); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2020 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2021 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2022 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2023 static void GetLabel(RestApiGetCall& call) |
|
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2024 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2025 if (call.IsDocumentation()) |
|
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2026 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2027 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2028 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2029 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2030 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2031 .SetSummary("Test label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2032 .SetDescription("Test whether the " + r + " is associated with the given label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2033 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2034 .SetUriArgument("label", "The label of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2035 .AddAnswerType(MimeType_PlainText, "Empty string is returned in the case of presence, error 404 in the case of absence"); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2036 return; |
|
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2037 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2038 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2039 CheckValidResourceType(call); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2040 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2041 assert(!call.GetFullUri().empty()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2042 const std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2043 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2044 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2045 std::string label = call.GetUriComponent("label", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2046 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2047 std::set<std::string> labels; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2048 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2049 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2050 if (labels.find(label) != labels.end()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2051 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2052 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2053 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2054 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2055 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2056 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2057 static void AddLabel(RestApiPutCall& call) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2058 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2059 if (call.IsDocumentation()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2060 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2061 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2062 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2063 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2064 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2065 .SetSummary("Add label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2066 .SetDescription("Associate a label with a " + r) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2067 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2068 .SetUriArgument("label", "The label to be added"); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2069 return; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2070 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2071 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2072 CheckValidResourceType(call); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2073 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2074 std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2075 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2076 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2077 std::string label = call.GetUriComponent("label", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2078 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Add); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2079 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2080 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
2081 } |
|
d0f7c742d397
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5200
diff
changeset
|
2082 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2083 |
|
d0f7c742d397
started implementation of labels
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diff
changeset
|
2084 static void RemoveLabel(RestApiDeleteCall& call) |
|
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2085 { |
|
d0f7c742d397
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5200
diff
changeset
|
2086 if (call.IsDocumentation()) |
|
d0f7c742d397
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5200
diff
changeset
|
2087 { |
|
d0f7c742d397
started implementation of labels
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diff
changeset
|
2088 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2089 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
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diff
changeset
|
2090 call.GetDocumentation() |
|
d0f7c742d397
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5200
diff
changeset
|
2091 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2092 .SetSummary("Remove label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2093 .SetDescription("Remove a label associated with a " + r) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2094 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2095 .SetUriArgument("label", "The label to be removed"); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2096 return; |
|
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2097 } |
|
d0f7c742d397
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parents:
5200
diff
changeset
|
2098 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2099 CheckValidResourceType(call); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2100 |
|
d0f7c742d397
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parents:
5200
diff
changeset
|
2101 std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
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|
2102 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
d0f7c742d397
started implementation of labels
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|
2103 |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2104 std::string label = call.GetUriComponent("label", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
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|
2105 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Remove); |
|
d0f7c742d397
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|
2106 |
|
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|
2107 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
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|
2108 } |
|
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|
2109 |
|
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|
2110 |
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|
2111 // Handling of attached files ----------------------------------------------- |
|
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refactoring of OrthancRestApi
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2112 |
| 974 | 2113 static void ListAttachments(RestApiGetCall& call) |
|
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2114 { |
| 4409 | 2115 if (call.IsDocumentation()) |
| 2116 { | |
| 2117 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2118 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2119 call.GetDocumentation() | |
| 2120 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2121 .SetSummary("List attachments") | |
| 2122 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
| 2123 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
4853
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Added links to download attachments from the Orthanc Explorer
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|
2124 .SetHttpGetArgument("full", RestApiCallDocumentation::Type_String, |
|
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Added links to download attachments from the Orthanc Explorer
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|
2125 "If present, retrieve the attachments list and their numerical ids", false) |
| 4409 | 2126 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") |
| 2127 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
| 2128 return; | |
| 2129 } | |
| 2130 | |
| 2131 const std::string resourceType = call.GetFullUri() [0]; | |
| 2132 const std::string publicId = call.GetUriComponent("id", ""); | |
|
4514
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|
2133 std::set<FileContentType> attachments; |
|
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|
2134 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
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|
2135 |
|
4853
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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diff
changeset
|
2136 Json::Value result; |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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diff
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|
2137 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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diff
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|
2138 if (call.HasArgument("full")) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2139 { |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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|
2140 result = Json::objectValue; |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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diff
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|
2141 |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2142 for (std::set<FileContentType>::const_iterator |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2143 it = attachments.begin(); it != attachments.end(); ++it) |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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|
2144 { |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2145 std::string key = EnumerationToString(*it); |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2146 result[key] = static_cast<uint16_t>(*it); |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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diff
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|
2147 } |
|
b3d0a3a4d890
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Alain Mazy <am@osimis.io>
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|
2148 } |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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diff
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|
2149 else |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2150 { |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2151 result = Json::arrayValue; |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2152 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2153 for (std::set<FileContentType>::const_iterator |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2154 it = attachments.begin(); it != attachments.end(); ++it) |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
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|
2155 { |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2156 result.append(EnumerationToString(*it)); |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2157 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2158 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2159 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2160 call.GetOutput().AnswerJson(result); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2161 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2162 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2163 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2164 static void AddAttachmentDocumentation(RestApiGetCall& call, |
|
f7d5372b59b3
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4623
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changeset
|
2165 const std::string& resourceType) |
|
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4623
diff
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|
2166 { |
|
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4623
diff
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|
2167 call.GetDocumentation() |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2168 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2169 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2170 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2171 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2172 } |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2173 |
|
f7d5372b59b3
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4623
diff
changeset
|
2174 |
|
f7d5372b59b3
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4623
diff
changeset
|
2175 static bool GetAttachmentInfo(FileInfo& info, |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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changeset
|
2176 RestApiGetCall& call) |
|
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changeset
|
2177 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2178 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2179 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2180 const std::string publicId = call.GetUriComponent("id", ""); |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2181 const std::string name = call.GetUriComponent("name", ""); |
|
751
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2182 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2183 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2184 int64_t revision; |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2185 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2186 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2187 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2188 |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2189 int64_t userRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2190 std::string userMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2191 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2192 revision == userRevision && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2193 info.GetUncompressedMD5() == userMD5) |
|
4627
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2194 { |
|
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changeset
|
2195 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
f7d5372b59b3
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|
2196 return false; |
|
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|
2197 } |
|
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|
2198 else |
|
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changeset
|
2199 { |
|
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|
2200 return true; |
|
f7d5372b59b3
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|
2201 } |
|
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|
2202 } |
|
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|
2203 else |
|
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|
2204 { |
|
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|
2205 throw OrthancException(ErrorCode_UnknownResource); |
|
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|
2206 } |
|
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|
2207 } |
|
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|
2208 |
|
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|
2209 |
| 974 | 2210 static void GetAttachmentOperations(RestApiGetCall& call) |
|
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|
2211 { |
| 4409 | 2212 if (call.IsDocumentation()) |
| 2213 { | |
| 2214 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2215 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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|
2216 AddAttachmentDocumentation(call, r); |
| 4409 | 2217 call.GetDocumentation() |
| 2218 .SetTag("Other") | |
| 4414 | 2219 .SetSummary("List operations on attachments") |
| 2220 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
| 4409 | 2221 .AddAnswerType(MimeType_Json, "List of the available operations") |
|
5432
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changeset
|
2222 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/6582b1c0-292ad5ab-ba0f088f-f7a1766f-9a29a54f/attachments/dicom", true); |
| 4409 | 2223 return; |
| 2224 } | |
| 2225 | |
|
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|
2226 FileInfo info; |
|
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|
2227 if (GetAttachmentInfo(info, call)) |
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|
2228 { |
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|
2229 Json::Value operations = Json::arrayValue; |
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2230 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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1556
diff
changeset
|
2231 operations.append("compress"); |
|
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|
2232 operations.append("compressed-data"); |
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diff
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|
2233 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2234 if (info.GetCompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2235 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2236 operations.append("compressed-md5"); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2237 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2238 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2239 operations.append("compressed-size"); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2240 operations.append("data"); |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2241 operations.append("info"); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
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|
2242 operations.append("is-compressed"); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2243 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2244 if (info.GetUncompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2245 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2246 operations.append("md5"); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2247 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2248 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2249 operations.append("size"); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2250 operations.append("uncompress"); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2251 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2252 if (info.GetCompressedMD5() != "" && |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2253 info.GetUncompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2254 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2255 operations.append("verify-md5"); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2256 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2257 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2258 call.GetOutput().AnswerJson(operations); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2259 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2260 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2261 |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2262 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2263 template <int uncompress> |
| 974 | 2264 static void GetAttachmentData(RestApiGetCall& call) |
|
751
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2265 { |
| 4409 | 2266 if (call.IsDocumentation()) |
| 2267 { | |
| 2268 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2269 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2270 call.GetDocumentation() | |
| 2271 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2272 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
| 2273 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
| 4418 | 2274 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
| 4409 | 2275 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 2276 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2277 .AddAnswerType(MimeType_Binary, "The attachment") |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2278 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2279 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4409 | 2280 return; |
| 2281 } | |
| 2282 | |
|
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|
2283 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2284 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2285 CheckValidResourceType(call); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2286 |
|
5197fd35333c
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diff
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|
2287 std::string publicId = call.GetUriComponent("id", ""); |
|
1146
200fcac0deb4
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2288 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
|
751
5197fd35333c
refactoring of OrthancRestApi
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|
2289 |
|
4640
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2290 FileInfo info; |
|
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2291 if (GetAttachmentInfo(info, call)) |
|
1146
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|
2292 { |
|
4640
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2293 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
|
66109d24d26e
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2294 |
|
66109d24d26e
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|
2295 if (uncompress) |
|
4627
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|
2296 { |
|
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2297 context.AnswerAttachment(call.GetOutput(), publicId, type); |
|
f7d5372b59b3
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|
2298 } |
|
f7d5372b59b3
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|
2299 else |
|
f7d5372b59b3
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4623
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changeset
|
2300 { |
|
4640
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2301 // Return the raw data (possibly compressed), as stored on the filesystem |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2302 std::string content; |
| 5427 | 2303 std::string attachmentId; |
|
4640
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2304 int64_t revision; |
| 5427 | 2305 context.ReadAttachment(content, revision, attachmentId, publicId, type, false, true /* skipCache when you absolutely need the compressed data */); |
|
4640
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|
2306 |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
2307 int64_t userRevision; |
|
66109d24d26e
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|
2308 std::string userMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2309 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
66109d24d26e
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changeset
|
2310 revision == userRevision && |
|
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2311 info.GetUncompressedMD5() == userMD5) |
|
66109d24d26e
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|
2312 { |
|
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changeset
|
2313 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
66109d24d26e
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|
2314 } |
|
66109d24d26e
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|
2315 else |
|
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|
2316 { |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
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|
2317 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
|
66109d24d26e
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|
2318 } |
|
4627
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2319 } |
|
1146
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2320 } |
|
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2321 } |
|
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2322 |
|
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2323 |
| 974 | 2324 static void GetAttachmentSize(RestApiGetCall& call) |
|
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|
2325 { |
| 4409 | 2326 if (call.IsDocumentation()) |
| 2327 { | |
| 2328 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2329 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
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4623
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|
2330 AddAttachmentDocumentation(call, r); |
| 4409 | 2331 call.GetDocumentation() |
| 2332 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2333 .SetSummary("Get size of attachment") | |
| 2334 .SetDescription("Get the size of one attachment associated with the given " + r) | |
| 2335 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
| 2336 return; | |
| 2337 } | |
| 2338 | |
|
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|
2339 FileInfo info; |
|
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|
2340 if (GetAttachmentInfo(info, call)) |
|
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diff
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|
2341 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
2342 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
|
751
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|
2343 } |
|
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|
2344 } |
|
5197fd35333c
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|
2345 |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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diff
changeset
|
2346 static void GetAttachmentInfo(RestApiGetCall& call) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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diff
changeset
|
2347 { |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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diff
changeset
|
2348 if (call.IsDocumentation()) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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diff
changeset
|
2349 { |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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changeset
|
2350 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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diff
changeset
|
2351 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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diff
changeset
|
2352 AddAttachmentDocumentation(call, r); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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changeset
|
2353 call.GetDocumentation() |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
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|
2354 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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4880
diff
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|
2355 .SetSummary("Get info about the attachment") |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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4880
diff
changeset
|
2356 .SetDescription("Get all the information about the attachment associated with the given " + r) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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4880
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changeset
|
2357 .AddAnswerType(MimeType_Json, "JSON object containing the information about the attachment") |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2358 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/attachments/dicom/info", true); |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2359 return; |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2360 } |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2361 |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2362 FileInfo info; |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2363 if (GetAttachmentInfo(info, call)) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2364 { |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2365 Json::Value result = Json::objectValue; |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2366 result["Uuid"] = info.GetUuid(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2367 result["ContentType"] = info.GetContentType(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2368 result["UncompressedSize"] = Json::Value::UInt64(info.GetUncompressedSize()); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2369 result["CompressedSize"] = Json::Value::UInt64(info.GetCompressedSize()); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2370 result["UncompressedMD5"] = info.GetUncompressedMD5(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2371 result["CompressedMD5"] = info.GetCompressedMD5(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2372 |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2373 call.GetOutput().AnswerJson(result); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2374 } |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2375 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2376 |
| 974 | 2377 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2378 { |
| 4409 | 2379 if (call.IsDocumentation()) |
| 2380 { | |
| 2381 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2382 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
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handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2383 AddAttachmentDocumentation(call, r); |
| 4409 | 2384 call.GetDocumentation() |
| 2385 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 4410 | 2386 .SetSummary("Get size of attachment on disk") |
| 4409 | 2387 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
| 4413 | 2388 "This is different from `.../size` iff `EnableStorage` is `true`.") |
| 4410 | 2389 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
| 4409 | 2390 return; |
| 2391 } | |
| 2392 | |
|
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5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2393 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2394 if (GetAttachmentInfo(info, call)) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2395 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2396 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2397 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2398 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2399 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2400 |
| 974 | 2401 static void GetAttachmentMD5(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2402 { |
| 4410 | 2403 if (call.IsDocumentation()) |
| 2404 { | |
| 2405 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2406 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2407 AddAttachmentDocumentation(call, r); |
| 4410 | 2408 call.GetDocumentation() |
| 2409 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2410 .SetSummary("Get MD5 of attachment") | |
| 2411 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
| 2412 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
| 2413 return; | |
| 2414 } | |
| 2415 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2416 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2417 if (GetAttachmentInfo(info, call) && |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2418 info.GetUncompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2419 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2420 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2421 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2422 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2423 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2424 |
| 974 | 2425 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2426 { |
| 4410 | 2427 if (call.IsDocumentation()) |
| 2428 { | |
| 2429 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2430 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2431 AddAttachmentDocumentation(call, r); |
| 4410 | 2432 call.GetDocumentation() |
| 2433 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2434 .SetSummary("Get MD5 of attachment on disk") | |
| 2435 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
| 4413 | 2436 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
| 4410 | 2437 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
| 2438 return; | |
| 2439 } | |
| 2440 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2441 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2442 if (GetAttachmentInfo(info, call) && |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2443 info.GetCompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2444 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2445 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2446 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2447 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2448 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2449 |
| 974 | 2450 static void VerifyAttachment(RestApiPostCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2451 { |
| 4410 | 2452 if (call.IsDocumentation()) |
| 2453 { | |
| 2454 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2455 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2456 call.GetDocumentation() | |
| 2457 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2458 .SetSummary("Verify attachment") | |
| 2459 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
| 2460 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2461 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 2462 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
| 2463 return; | |
| 2464 } | |
| 2465 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2466 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2467 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2468 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2469 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2470 std::string name = call.GetUriComponent("name", ""); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2471 FileContentType contentType = StringToContentType(name); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2472 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2473 FileInfo info; |
|
4627
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handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2474 int64_t revision; // Ignored |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2475 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
|
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2476 info.GetCompressedMD5() == "" || |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2477 info.GetUncompressedMD5() == "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2478 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2479 // Inexistent resource, or no MD5 available |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2480 return; |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2481 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2482 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2483 bool ok = false; |
|
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
2484 |
|
5197fd35333c
refactoring of OrthancRestApi
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diff
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|
2485 // First check whether the compressed data is correctly stored in the disk |
|
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
2486 std::string data; |
| 5427 | 2487 std::string attachmentId; |
| 2488 | |
| 2489 context.ReadAttachment(data, revision, attachmentId, publicId, StringToContentType(name), false, true /* skipCache when you absolutely need the compressed data */); | |
|
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|
2490 |
|
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diff
changeset
|
2491 std::string actualMD5; |
|
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
2492 Toolbox::ComputeMD5(actualMD5, data); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2493 |
|
5197fd35333c
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diff
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|
2494 if (actualMD5 == info.GetCompressedMD5()) |
|
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changeset
|
2495 { |
|
5197fd35333c
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diff
changeset
|
2496 // The compressed data is OK. If a compression algorithm was |
|
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
2497 // applied to it, now check the MD5 of the uncompressed data. |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2498 if (info.GetCompressionType() == CompressionType_None) |
|
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refactoring of OrthancRestApi
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changeset
|
2499 { |
|
5197fd35333c
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parents:
diff
changeset
|
2500 ok = true; |
|
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diff
changeset
|
2501 } |
|
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diff
changeset
|
2502 else |
|
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
2503 { |
| 5427 | 2504 context.ReadAttachment(data, revision, attachmentId, publicId, StringToContentType(name), true, true /* skipCache when you absolutely need the compressed data */); |
|
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refactoring of OrthancRestApi
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diff
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|
2505 Toolbox::ComputeMD5(actualMD5, data); |
|
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
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|
2506 ok = (actualMD5 == info.GetUncompressedMD5()); |
|
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refactoring of OrthancRestApi
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|
2507 } |
|
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
2508 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2509 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2510 if (ok) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2511 { |
|
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2512 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2513 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2514 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2515 else |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2516 { |
|
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2517 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2518 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2519 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2520 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2521 |
| 974 | 2522 static void UploadAttachment(RestApiPutCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2523 { |
| 4414 | 2524 if (call.IsDocumentation()) |
| 2525 { | |
| 2526 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2527 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2528 call.GetDocumentation() | |
| 2529 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2530 .SetSummary("Set attachment") | |
| 2531 .SetDescription("Attach a file to the given DICOM " + r + | |
| 2532 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
| 2533 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 2534 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
| 2535 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2536 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2537 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
| 4414 | 2538 return; |
| 2539 } | |
| 2540 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2541 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2542 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2543 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2544 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2545 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2546 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2547 FileContentType contentType = StringToContentType(name); |
|
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2548 if (IsUserContentType(contentType) || // It is forbidden to modify internal attachments... |
|
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2549 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2550 { |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2551 int64_t oldRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2552 std::string oldMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2553 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2554 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2555 if (!hasOldRevision) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2556 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2557 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2558 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2559 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2560 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2561 // the actual value of "oldRevision" if the metadata is |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2562 // inexistent as expected |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2563 hasOldRevision = true; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2564 oldRevision = -1; // dummy value |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2565 oldMD5.clear(); // dummy value |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2566 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2567 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2568 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2569 int64_t newRevision; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2570 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2571 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2572 |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2573 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2574 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2575 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2576 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2577 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2578 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2579 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2580 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2581 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2582 |
| 974 | 2583 static void DeleteAttachment(RestApiDeleteCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2584 { |
| 4413 | 2585 if (call.IsDocumentation()) |
| 2586 { | |
| 2587 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2588 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2589 call.GetDocumentation() | |
| 2590 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2591 .SetSummary("Delete attachment") | |
| 4414 | 2592 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
| 2593 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
| 4413 | 2594 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2595 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2596 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2597 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4413 | 2598 return; |
| 2599 } | |
| 2600 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2601 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2602 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2603 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2604 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2605 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2606 |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2607 bool allowed; |
|
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2608 if (IsUserContentType(contentType) || // It is forbidden to delete internal attachments... |
|
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2609 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2610 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2611 allowed = true; |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2612 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2613 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2614 { |
|
2940
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2615 OrthancConfiguration::ReaderLock lock; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2616 |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2617 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2618 contentType == FileContentType_DicomAsJson) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2619 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2620 allowed = true; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2621 } |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2622 else |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2623 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2624 // It is forbidden to delete internal attachments, except for |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2625 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2626 // would be automatically reconstructed on the next GET call) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2627 allowed = false; |
|
4767d36679ed
refactoring access to Orthanc configuration
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2935
diff
changeset
|
2628 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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changeset
|
2629 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
changeset
|
2630 |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
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changeset
|
2631 if (allowed) |
|
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2632 { |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2633 bool found; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2634 int64_t revision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2635 std::string md5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2636 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2637 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2638 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2639 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2640 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2641 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2642 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2643 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2644 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2645 throw OrthancException(ErrorCode_Revision, |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2646 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2647 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2648 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2649 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2650 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2651 false, -1 /* dummy value */, "" /* dummy value */); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2652 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2653 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2654 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2655 if (found) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2656 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2657 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2658 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2659 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2660 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2661 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2662 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2663 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2664 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2665 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2666 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2667 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2668 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2669 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2670 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2671 template <enum CompressionType compression> |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2672 static void ChangeAttachmentCompression(RestApiPostCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2673 { |
| 4413 | 2674 if (call.IsDocumentation()) |
| 2675 { | |
| 2676 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2677 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2678 call.GetDocumentation() | |
| 2679 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2680 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
| 2681 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
| 2682 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2683 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
| 4413 | 2684 return; |
| 2685 } | |
| 2686 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2687 CheckValidResourceType(call); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2688 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2689 std::string publicId = call.GetUriComponent("id", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2690 std::string name = call.GetUriComponent("name", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2691 FileContentType contentType = StringToContentType(name); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2692 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2693 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2694 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2695 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2696 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2697 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2698 static void IsAttachmentCompressed(RestApiGetCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2699 { |
| 4413 | 2700 if (call.IsDocumentation()) |
| 2701 { | |
| 2702 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2703 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2704 AddAttachmentDocumentation(call, r); |
| 4413 | 2705 call.GetDocumentation() |
| 2706 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2707 .SetSummary("Is attachment compressed?") | |
| 2708 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
| 2709 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
| 2710 return; | |
| 2711 } | |
| 2712 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2713 FileInfo info; |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2714 if (GetAttachmentInfo(info, call)) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2715 { |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2716 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2717 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2718 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2719 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2720 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2721 |
| 782 | 2722 // Raw access to the DICOM tags of an instance ------------------------------ |
| 2723 | |
| 974 | 2724 static void GetRawContent(RestApiGetCall& call) |
| 782 | 2725 { |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2726 if (call.IsDocumentation()) |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2727 { |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2728 call.GetDocumentation() |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2729 .SetTag("Instances") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2730 .SetSummary("Get raw tag") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2731 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2732 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
5393
c5c00bee291a
in openapi generator: renamed '...' into 'path' since '...' is an invalid name
Alain Mazy <am@osimis.io>
parents:
5392
diff
changeset
|
2733 .SetUriArgument("path", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2734 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2735 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2736 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2737 "or JSON array containing the list of available tags if accessing a dataset"); |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2738 return; |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2739 } |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2740 |
| 782 | 2741 std::string id = call.GetUriComponent("id", ""); |
| 2742 | |
| 2743 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
| 2744 | |
| 2745 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
| 2746 } | |
| 2747 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2748 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2749 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2750 static bool ExtractSharedTags(Json::Value& shared, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2751 ServerContext& context, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2752 const std::string& publicId) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2753 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2754 // Retrieve all the instances of this patient/study/series |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2755 typedef std::list<std::string> Instances; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2756 Instances instances; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2757 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2758 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2759 // Loop over the instances |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2760 bool isFirst = true; |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2761 shared = Json::objectValue; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2762 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2763 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2764 it != instances.end(); ++it) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2765 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2766 // Get the tags of the current instance, in the simplified format |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2767 Json::Value tags; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2768 |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2769 try |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2770 { |
| 2124 | 2771 context.ReadDicomAsJson(tags, *it); |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2772 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2773 catch (OrthancException&) |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2774 { |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2775 // Race condition: This instance has been removed since |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2776 // (*). Ignore this instance. |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2777 continue; |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2778 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2779 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2780 if (tags.type() != Json::objectValue) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2781 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2782 return false; // Error |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2783 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2784 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2785 // Only keep the tags that are mapped to a string |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2786 Json::Value::Members members = tags.getMemberNames(); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2787 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2788 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2789 const Json::Value& tag = tags[members[i]]; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2790 if (tag.type() != Json::objectValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2791 tag["Type"].type() != Json::stringValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2792 tag["Type"].asString() != "String") |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2793 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2794 tags.removeMember(members[i]); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2795 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2796 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2797 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2798 if (isFirst) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2799 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2800 // This is the first instance, keep its tags as such |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2801 shared = tags; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2802 isFirst = false; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2803 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2804 else |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2805 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2806 // Loop over all the members of the shared tags extracted so |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2807 // far. If the value of one of these tags does not match its |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2808 // value in the current instance, remove it. |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2809 members = shared.getMemberNames(); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2810 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2811 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2812 if (!tags.isMember(members[i]) || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2813 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2814 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2815 shared.removeMember(members[i]); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2816 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2817 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2818 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2819 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2820 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2821 return true; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2822 } |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2823 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2824 |
| 974 | 2825 static void GetSharedTags(RestApiGetCall& call) |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2826 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2827 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2828 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2829 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2830 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2831 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2832 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2833 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2834 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2835 .SetSummary("Get shared tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2836 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2837 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2838 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2839 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2840 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2841 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2842 } |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2843 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2844 ServerContext& context = OrthancRestApi::GetContext(call); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2845 std::string publicId = call.GetUriComponent("id", ""); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2846 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2847 Json::Value sharedTags; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2848 if (ExtractSharedTags(sharedTags, context, publicId)) |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2849 { |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2850 // Success: Send the value of the shared tags |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2851 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2852 } |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2853 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2854 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2855 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2856 template <enum ResourceType resourceType, |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2857 enum DicomModule module> |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2858 static void GetModule(RestApiGetCall& call) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2859 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2860 if (call.IsDocumentation()) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2861 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2862 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2863 std::string m; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2864 switch (module) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2865 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2866 case DicomModule_Patient: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2867 m = "patient"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2868 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2869 case DicomModule_Study: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2870 m = "study"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2871 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2872 case DicomModule_Series: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2873 m = "series"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2874 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2875 case DicomModule_Instance: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2876 m = "instance"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2877 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2878 default: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2879 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2880 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2881 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2882 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2883 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2884 call.GetDocumentation() |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2885 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2886 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2887 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2888 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2889 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2890 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2891 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2892 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2893 return; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2894 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2895 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2896 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2897 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2898 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2899 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2900 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2901 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
|
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2902 { |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2903 throw OrthancException(ErrorCode_NotImplemented); |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2904 } |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2905 |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2906 ServerContext& context = OrthancRestApi::GetContext(call); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2907 std::string publicId = call.GetUriComponent("id", ""); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2908 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2909 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2910 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2911 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2912 typedef std::set<DicomTag> ModuleTags; |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2913 ModuleTags moduleTags; |
| 1368 | 2914 DicomTag::AddTagsForModule(moduleTags, module); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2915 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2916 Json::Value tags; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2917 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2918 if (resourceType != ResourceType_Instance) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2919 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2920 // Retrieve all the instances of this patient/study/series |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2921 typedef std::list<std::string> Instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2922 Instances instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2923 context.GetIndex().GetChildInstances(instances, publicId); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2924 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2925 if (instances.empty()) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2926 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2927 return; // Error: No instance (should never happen) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2928 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2929 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2930 // Select one child instance |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2931 publicId = instances.front(); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2932 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2933 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2934 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2935 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2936 // Filter the tags of the instance according to the module |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2937 Json::Value result = Json::objectValue; |
| 1303 | 2938 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2939 { |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2940 std::string s = tag->Format(); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2941 if (tags.isMember(s)) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2942 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2943 result[s] = tags[s]; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2944 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2945 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2946 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2947 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2948 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2949 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2950 |
| 1722 | 2951 namespace |
| 2952 { | |
| 2953 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
| 2954 } | |
| 2955 | |
| 2956 | |
| 2957 static void AccumulateLookupResults(LookupResults& result, | |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2958 ServerIndex& index, |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2959 const DicomTag& tag, |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2960 const std::string& value, |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2961 ResourceType level) |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2962 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2963 std::vector<std::string> tmp; |
|
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
2964 index.LookupIdentifierExact(tmp, level, tag, value); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2965 |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2966 for (size_t i = 0; i < tmp.size(); i++) |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2967 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2968 result.push_back(std::make_pair(level, tmp[i])); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2969 } |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2970 } |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2971 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2972 |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2973 static void Lookup(RestApiPostCall& call) |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2974 { |
| 4422 | 2975 if (call.IsDocumentation()) |
| 2976 { | |
| 2977 call.GetDocumentation() | |
| 2978 .SetTag("System") | |
| 2979 .SetSummary("Look for DICOM identifiers") | |
| 2980 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
| 2981 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
| 2982 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
| 2983 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
| 2984 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
| 2985 "DICOM resource that is stored by Orthanc"); | |
| 2986 return; | |
| 2987 } | |
| 2988 | |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
2989 std::string tag; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
2990 call.BodyToString(tag); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2991 |
| 1722 | 2992 LookupResults resources; |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2993 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2994 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2995 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2996 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2997 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2998 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2999 Json::Value result = Json::arrayValue; |
| 1722 | 3000 for (LookupResults::const_iterator |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3001 it = resources.begin(); it != resources.end(); ++it) |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3002 { |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3003 ResourceType type = it->first; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3004 const std::string& id = it->second; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3005 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3006 Json::Value item = Json::objectValue; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3007 item["Type"] = EnumerationToString(type); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3008 item["ID"] = id; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3009 item["Path"] = GetBasePath(type, id); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3010 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3011 result.append(item); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3012 } |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3013 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3014 call.GetOutput().AnswerJson(result); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3015 } |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3016 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3017 |
| 1354 | 3018 static void Find(RestApiPostCall& call) |
| 3019 { | |
| 2998 | 3020 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
| 3021 static const char* const KEY_EXPAND = "Expand"; | |
| 3022 static const char* const KEY_LEVEL = "Level"; | |
| 3023 static const char* const KEY_LIMIT = "Limit"; | |
| 3024 static const char* const KEY_QUERY = "Query"; | |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3025 static const char* const KEY_REQUESTED_TAGS = "RequestedTags"; |
| 2998 | 3026 static const char* const KEY_SINCE = "Since"; |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3027 static const char* const KEY_LABELS = "Labels"; // New in Orthanc 1.12.0 |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3028 static const char* const KEY_LABELS_CONSTRAINT = "LabelsConstraint"; // New in Orthanc 1.12.0 |
| 2998 | 3029 |
| 4421 | 3030 if (call.IsDocumentation()) |
| 3031 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3032 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3033 |
| 4421 | 3034 call.GetDocumentation() |
| 3035 .SetTag("System") | |
| 3036 .SetSummary("Look for local resources") | |
| 3037 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
| 3038 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3039 "https://orthanc.uclouvain.be/book/users/rest.html#performing-finds-within-orthanc") |
| 4421 | 3040 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, |
| 3041 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
| 3042 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
| 3043 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
| 3044 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
| 3045 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
| 3046 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
| 3047 "Limit the number of reported resources", false) | |
| 3048 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
| 3049 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3050 .SetRequestField(KEY_REQUESTED_TAGS, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3051 "A list of DICOM tags to include in the response (applicable only if \"Expand\" is set to true). " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3052 "The tags requested tags are returned in the 'RequestedTags' field in the response. " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3053 "Note that, if you are requesting tags that are not listed in the Main Dicom Tags stored in DB, building the response " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3054 "might be slow since Orthanc will need to access the DICOM files. If not specified, Orthanc will return " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3055 "all Main Dicom Tags to keep backward compatibility with Orthanc prior to 1.11.0.", false) |
| 4421 | 3056 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, |
| 3057 "Associative array containing the filter on the values of the DICOM tags", true) | |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3058 .SetRequestField(KEY_LABELS, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3059 "List of strings specifying which labels to look for in the resources (new in Orthanc 1.12.0)", true) |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3060 .SetRequestField(KEY_LABELS_CONSTRAINT, RestApiCallDocumentation::Type_String, |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3061 "Constraint on the labels, can be `All`, `Any`, or `None` (defaults to `All`, new in Orthanc 1.12.0)", true) |
| 4421 | 3062 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 3063 "about the reported resources (if `Expand` argument is `true`)"); | |
| 3064 return; | |
| 3065 } | |
| 3066 | |
| 1358 | 3067 ServerContext& context = OrthancRestApi::GetContext(call); |
| 1354 | 3068 |
| 3069 Json::Value request; | |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3070 if (!call.ParseJsonRequest(request) || |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3071 request.type() != Json::objectValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3072 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3073 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3074 "The body must contain a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3075 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3076 else if (!request.isMember(KEY_LEVEL) || |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3077 request[KEY_LEVEL].type() != Json::stringValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3078 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3079 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3080 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3081 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3082 else if (!request.isMember(KEY_QUERY) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3083 request[KEY_QUERY].type() != Json::objectValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3084 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3085 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3086 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3087 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3088 else if (request.isMember(KEY_CASE_SENSITIVE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3089 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3090 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3091 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3092 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" must be a Boolean"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3093 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3094 else if (request.isMember(KEY_LIMIT) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3095 request[KEY_LIMIT].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3096 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3097 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3098 "Field \"" + std::string(KEY_LIMIT) + "\" must be an integer"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3099 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3100 else if (request.isMember(KEY_SINCE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3101 request[KEY_SINCE].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3102 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3103 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3104 "Field \"" + std::string(KEY_SINCE) + "\" must be an integer"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3105 } |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3106 else if (request.isMember(KEY_REQUESTED_TAGS) && |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3107 request[KEY_REQUESTED_TAGS].type() != Json::arrayValue) |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3108 { |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3109 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3110 "Field \"" + std::string(KEY_REQUESTED_TAGS) + "\" must be an array"); |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3111 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3112 else if (request.isMember(KEY_LABELS) && |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3113 request[KEY_LABELS].type() != Json::arrayValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3114 { |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3115 throw OrthancException(ErrorCode_BadRequest, |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3116 "Field \"" + std::string(KEY_LABELS) + "\" must be an array of strings"); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3117 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3118 else if (request.isMember(KEY_LABELS_CONSTRAINT) && |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3119 request[KEY_LABELS_CONSTRAINT].type() != Json::stringValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3120 { |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3121 throw OrthancException(ErrorCode_BadRequest, |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3122 "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be an array of strings"); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3123 } |
|
5704
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3124 else |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3125 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3126 bool expand = false; |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3127 if (request.isMember(KEY_EXPAND)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3128 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3129 expand = request[KEY_EXPAND].asBool(); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3130 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3131 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3132 const ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3133 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3134 ResourceFinder finder(level, expand); |
|
5688
d0a264b803f1
first implementation of database paging
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5684
diff
changeset
|
3135 finder.SetDatabaseLimits(context.GetDatabaseLimits(level)); |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3136 finder.SetFormat(OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human)); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3137 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3138 if (request.isMember(KEY_LIMIT)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3139 { |
| 5693 | 3140 int64_t tmp = request[KEY_LIMIT].asInt64(); |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3141 if (tmp < 0) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3142 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3143 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3144 "Field \"" + std::string(KEY_LIMIT) + "\" must be a positive integer"); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3145 } |
| 5695 | 3146 else if (tmp != 0) // This is for compatibility with Orthanc 1.12.4 |
| 5693 | 3147 { |
| 3148 finder.SetLimitsCount(static_cast<uint64_t>(tmp)); | |
| 3149 } | |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3150 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3151 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3152 if (request.isMember(KEY_SINCE)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3153 { |
| 5693 | 3154 int64_t tmp = request[KEY_SINCE].asInt64(); |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3155 if (tmp < 0) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3156 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3157 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3158 "Field \"" + std::string(KEY_SINCE) + "\" must be a positive integer"); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3159 } |
| 5693 | 3160 else |
| 3161 { | |
| 3162 finder.SetLimitsSince(static_cast<uint64_t>(tmp)); | |
| 3163 } | |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3164 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3165 |
|
5690
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3166 { |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3167 bool caseSensitive = false; |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3168 if (request.isMember(KEY_CASE_SENSITIVE)) |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3169 { |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3170 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3171 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3172 |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3173 DatabaseLookup query; |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3174 |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3175 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3176 for (size_t i = 0; i < members.size(); i++) |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3177 { |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3178 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3179 { |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3180 throw OrthancException(ErrorCode_BadRequest, |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3181 "Tag \"" + members[i] + "\" must be associated with a string"); |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3182 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3183 |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3184 const std::string value = request[KEY_QUERY][members[i]].asString(); |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3185 |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3186 if (!value.empty()) |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3187 { |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3188 // An empty string corresponds to an universal constraint, |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3189 // so we ignore it. This mimics the behavior of class |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3190 // "OrthancFindRequestHandler" |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3191 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3192 value, caseSensitive, true); |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3193 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3194 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3195 |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3196 finder.SetDatabaseLookup(query); |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3197 } |
|
708952bd869c
integration tests are passing with ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5688
diff
changeset
|
3198 |
|
5677
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3199 if (request.isMember(KEY_REQUESTED_TAGS)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3200 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3201 std::set<DicomTag> requestedTags; |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3202 FromDcmtkBridge::ParseListOfTags(requestedTags, request[KEY_REQUESTED_TAGS]); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3203 finder.AddRequestedTags(requestedTags); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3204 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3205 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3206 if (request.isMember(KEY_LABELS)) // New in Orthanc 1.12.0 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3207 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3208 for (Json::Value::ArrayIndex i = 0; i < request[KEY_LABELS].size(); i++) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3209 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3210 if (request[KEY_LABELS][i].type() != Json::stringValue) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3211 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3212 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS) + "\" must contain strings"); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3213 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3214 else |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3215 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3216 finder.AddLabel(request[KEY_LABELS][i].asString()); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3217 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3218 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3219 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3220 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3221 finder.SetLabelsConstraint(LabelsConstraint_All); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3222 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3223 if (request.isMember(KEY_LABELS_CONSTRAINT)) |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3224 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3225 const std::string& s = request[KEY_LABELS_CONSTRAINT].asString(); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3226 if (s == "All") |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3227 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3228 finder.SetLabelsConstraint(LabelsConstraint_All); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3229 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3230 else if (s == "Any") |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3231 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3232 finder.SetLabelsConstraint(LabelsConstraint_Any); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3233 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3234 else if (s == "None") |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3235 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3236 finder.SetLabelsConstraint(LabelsConstraint_None); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3237 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3238 else |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3239 { |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3240 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be \"All\", \"Any\", or \"None\""); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3241 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3242 } |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3243 |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3244 Json::Value answer; |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3245 finder.Execute(answer, context); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3246 call.GetOutput().AnswerJson(answer); |
|
dc96401dbe88
starting the refactoring of /tools/find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5665
diff
changeset
|
3247 } |
| 1354 | 3248 } |
| 3249 | |
| 3250 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3251 template <enum ResourceType start, |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3252 enum ResourceType end> |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3253 static void GetChildResources(RestApiGetCall& call) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3254 { |
| 4415 | 3255 if (call.IsDocumentation()) |
| 3256 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3257 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3258 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3259 |
| 4415 | 3260 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
| 3261 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3262 call.GetDocumentation() | |
| 3263 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3264 .SetSummary("Get child " + children) | |
| 3265 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3266 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3267 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3268 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
|
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3269 "If false or missing, only retrieve the list of child " + children, false) |
| 4415 | 3270 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) |
| 3271 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
| 3272 return; | |
| 3273 } | |
| 3274 | |
|
5617
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3275 const bool expand = (!call.HasArgument("expand") || |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3276 // this "expand" is the only one to have a false default value to keep backward compatibility |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3277 call.GetBooleanArgument("expand", false)); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3278 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
8905ffa45fc2
started listing of children resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5615
diff
changeset
|
3279 |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3280 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3281 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3282 |
|
5704
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3283 ResourceFinder finder(end, expand); |
|
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3284 finder.SetOrthancId(start, call.GetUriComponent("id", "")); |
|
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3285 finder.AddRequestedTags(requestedTags); |
|
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3286 finder.SetFormat(format); |
|
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3287 |
|
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3288 Json::Value answer; |
|
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3289 finder.Execute(answer, OrthancRestApi::GetContext(call)); |
|
0c2f0d72d143
only keep experimental versions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5695
diff
changeset
|
3290 call.GetOutput().AnswerJson(answer); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3291 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3292 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3293 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3294 static void GetChildInstancesTags(RestApiGetCall& call) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3295 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3296 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3297 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3298 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3299 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3300 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3301 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3302 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3303 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3304 .SetSummary("Get tags of instances") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3305 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3306 " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3307 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3308 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3309 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3310 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3311 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3312 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3313 } |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3314 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3315 ServerContext& context = OrthancRestApi::GetContext(call); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3316 std::string publicId = call.GetUriComponent("id", ""); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3317 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3318 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3319 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3320 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3321 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3322 // Retrieve all the instances of this patient/study/series |
|
a921e3b5e763
bulk tags retrieval
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parents:
1146
diff
changeset
|
3323 typedef std::list<std::string> Instances; |
|
a921e3b5e763
bulk tags retrieval
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parents:
1146
diff
changeset
|
3324 Instances instances; |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3325 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3326 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3327 |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3328 Json::Value result = Json::objectValue; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3329 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3330 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 3331 it != instances.end(); ++it) |
|
1166
a921e3b5e763
bulk tags retrieval
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diff
changeset
|
3332 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3333 Json::Value full; |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3334 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3335 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3336 if (format != DicomToJsonFormat_Full) |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3337 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3338 Json::Value simplified; |
|
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
3339 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3340 result[*it] = simplified; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3341 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3342 else |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3343 { |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3344 result[*it] = full; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3345 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3346 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3347 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3348 call.GetOutput().AnswerJson(result); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3349 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3350 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3351 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3352 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3353 template <enum ResourceType start, |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3354 enum ResourceType end> |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3355 static void GetParentResource(RestApiGetCall& call) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3356 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3357 assert(start > end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3358 |
| 4415 | 3359 if (call.IsDocumentation()) |
| 3360 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3361 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3362 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3363 |
| 4415 | 3364 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
| 3365 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3366 call.GetDocumentation() | |
| 3367 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3368 .SetSummary("Get parent " + parent) | |
| 3369 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3370 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3371 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 3372 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
| 3373 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
| 3374 return; | |
| 3375 } | |
| 3376 | |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3377 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3378 |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3379 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3380 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3381 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3382 std::string current = call.GetUriComponent("id", ""); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3383 ResourceType currentType = start; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3384 while (currentType > end) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3385 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3386 std::string parent; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3387 if (!index.LookupParent(parent, current)) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3388 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3389 // Error that could happen if the resource gets deleted by |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3390 // another concurrent call |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3391 return; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3392 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3393 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3394 current = parent; |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3395 currentType = GetParentResourceType(currentType); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3396 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3397 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3398 assert(currentType == end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3399 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3400 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3401 |
| 4554 | 3402 Json::Value resource; |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3403 if (OrthancRestApi::GetContext(call).ExpandResource(resource, current, end, format, requestedTags, true /* allowStorageAccess */)) |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3404 { |
| 4554 | 3405 call.GetOutput().AnswerJson(resource); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3406 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3407 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3408 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3409 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3410 static void ExtractPdf(RestApiGetCall& call) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3411 { |
| 4407 | 3412 if (call.IsDocumentation()) |
| 3413 { | |
| 3414 call.GetDocumentation() | |
| 3415 .SetTag("Instances") | |
| 3416 .SetSummary("Get embedded PDF") | |
| 3417 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
| 3418 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
| 3419 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
| 3420 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
| 3421 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
| 3422 return; | |
| 3423 } | |
| 3424 | |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3425 const std::string id = call.GetUriComponent("id", ""); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3426 std::string pdf; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3427 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3428 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3429 if (locker.GetDicom().ExtractPdf(pdf)) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3430 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3431 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3432 return; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3433 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3434 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3435 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3436 |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3437 static void OrderSlices(RestApiGetCall& call) |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3438 { |
| 4421 | 3439 if (call.IsDocumentation()) |
| 3440 { | |
| 3441 call.GetDocumentation() | |
| 3442 .SetDeprecated() | |
| 3443 .SetTag("Series") | |
| 3444 .SetSummary("Order the slices") | |
| 3445 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
| 3446 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
| 3447 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
| 3448 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3449 "Ordered list of paths to DICOM instances") | |
| 3450 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3451 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
| 3452 "in the case of multiframe images.") | |
| 3453 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
| 3454 "Same information as the `Slices` field, but in a compact form") | |
| 3455 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
| 3456 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3457 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); |
| 4421 | 3458 return; |
| 3459 } | |
| 3460 | |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3461 const std::string id = call.GetUriComponent("id", ""); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3462 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3463 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3464 SliceOrdering ordering(index, id); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3465 |
|
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3466 Json::Value result; |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3467 ordering.Format(result); |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3468 call.GetOutput().AnswerJson(result); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3469 } |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3470 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3471 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3472 static void GetInstanceHeader(RestApiGetCall& call) |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3473 { |
| 4404 | 3474 if (call.IsDocumentation()) |
| 3475 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3476 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 3477 call.GetDocumentation() |
| 3478 .SetTag("Instances") | |
| 3479 .SetSummary("Get DICOM meta-header") | |
| 3480 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
| 3481 "combines hexadecimal tags with human-readable description.") | |
| 3482 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 3483 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3484 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); |
| 4404 | 3485 return; |
| 3486 } | |
| 3487 | |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3488 ServerContext& context = OrthancRestApi::GetContext(call); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3489 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3490 std::string publicId = call.GetUriComponent("id", ""); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3491 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3492 std::string dicomContent; |
|
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
3493 context.ReadDicomForHeader(dicomContent, publicId); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3494 |
|
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3495 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3496 // speed up things here |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3497 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3498 ParsedDicomFile dicom(dicomContent); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3499 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3500 Json::Value header; |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3501 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3502 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3503 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3504 } |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3505 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3506 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3507 static void InvalidateTags(RestApiPostCall& call) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3508 { |
| 4420 | 3509 if (call.IsDocumentation()) |
| 3510 { | |
| 3511 call.GetDocumentation() | |
| 3512 .SetTag("System") | |
| 3513 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
| 3514 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
| 3515 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
| 3516 "This is notably useful after changes to the `Dictionary` configuration option. " | |
|
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3517 "https://orthanc.uclouvain.be/book/faq/orthanc-storage.html#storage-area"); |
| 4420 | 3518 return; |
| 3519 } | |
| 3520 | |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3521 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3522 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3523 // Loop over the instances, grouping them by parent studies so as |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3524 // to avoid large memory consumption |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3525 std::list<std::string> studies; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3526 index.GetAllUuids(studies, ResourceType_Study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3527 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3528 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3529 study = studies.begin(); study != studies.end(); ++study) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3530 { |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3531 std::list<std::string> instances; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3532 index.GetChildInstances(instances, *study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3533 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3534 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3535 instance = instances.begin(); instance != instances.end(); ++instance) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3536 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3537 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3538 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3539 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3540 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3541 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3542 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3543 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3544 |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3545 void DocumentReconstructFilesField(RestApiPostCall& call, bool documentLimitField) |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3546 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3547 call.GetDocumentation() |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3548 .SetRequestField(RECONSTRUCT_FILES, RestApiCallDocumentation::Type_Boolean, |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3549 "Also reconstruct the files of the resources (e.g: apply IngestTranscoding, StorageCompression). " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3550 "'false' by default. (New in Orthanc 1.11.0)", false); |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3551 if (documentLimitField) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3552 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3553 call.GetDocumentation() |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3554 .SetRequestField(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS, RestApiCallDocumentation::Type_Boolean, |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3555 "Only reconstruct this level MainDicomTags by re-reading them from a random child instance of the resource. " |
| 5655 | 3556 "This option is much faster than a full reconstruct and is useful e.g. if you have modified the " |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3557 "'ExtraMainDicomTags' at the Study level to optimize the speed of some C-Find. " |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3558 "'false' by default. (New in Orthanc 1.12.4)", false); |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3559 } |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3560 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3561 |
| 4994 | 3562 bool GetReconstructFilesField(const RestApiPostCall& call) |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3563 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3564 bool reconstructFiles = false; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3565 Json::Value request; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3566 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3567 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(RECONSTRUCT_FILES)) // allow "" payload to keep backward compatibility |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3568 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3569 if (!request[RECONSTRUCT_FILES].isBool()) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3570 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3571 throw OrthancException(ErrorCode_BadFileFormat, |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3572 "The field " + std::string(RECONSTRUCT_FILES) + " must contain a Boolean"); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3573 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3574 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3575 reconstructFiles = request[RECONSTRUCT_FILES].asBool(); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3576 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3577 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3578 return reconstructFiles; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3579 } |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3580 |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3581 bool GetLimitToThisLevelMainDicomTags(const RestApiPostCall& call) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3582 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3583 bool limitToThisLevel = false; |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3584 Json::Value request; |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3585 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3586 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS)) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3587 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3588 if (!request[LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS].isBool()) |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3589 { |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3590 throw OrthancException(ErrorCode_BadFileFormat, |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3591 "The field " + std::string(LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS) + " must contain a Boolean"); |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3592 } |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3593 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3594 limitToThisLevel = request[LIMIT_TO_THIS_LEVEL_MAIN_DICOM_TAGS].asBool(); |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3595 } |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3596 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3597 return limitToThisLevel; |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3598 } |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3599 |
|
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3600 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3601 template <enum ResourceType type> |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3602 static void ReconstructResource(RestApiPostCall& call) |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3603 { |
| 4420 | 3604 if (call.IsDocumentation()) |
| 3605 { | |
| 3606 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
| 3607 call.GetDocumentation() | |
| 3608 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3609 .SetSummary("Reconstruct tags & optionally files of " + resource) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3610 .SetDescription("Reconstruct the main DICOM tags in DB of the " + resource + " whose Orthanc identifier is provided " |
| 4420 | 3611 "in the URL. This is useful if child studies/series/instances have inconsistent values for " |
| 3612 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
| 3613 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
| 3614 "parsed again, and the Orthanc index will be updated accordingly.") | |
| 3615 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3616 DocumentReconstructFilesField(call, true); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3617 |
| 4420 | 3618 return; |
| 3619 } | |
| 3620 | |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3621 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3622 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", ""), GetReconstructFilesField(call), GetLimitToThisLevelMainDicomTags(call), type); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3623 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3624 } |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3625 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3626 |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3627 static void ReconstructAllResources(RestApiPostCall& call) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3628 { |
| 4420 | 3629 if (call.IsDocumentation()) |
| 3630 { | |
| 3631 call.GetDocumentation() | |
| 3632 .SetTag("System") | |
| 3633 .SetSummary("Reconstruct all the index") | |
| 3634 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
| 3635 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
| 3636 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3637 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated. " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3638 "If you have a large database to process, it is advised to use the Housekeeper plugin to perform " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3639 "this action resource by resource"); |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3640 DocumentReconstructFilesField(call, false); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3641 |
| 4420 | 3642 return; |
| 3643 } | |
| 3644 | |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3645 ServerContext& context = OrthancRestApi::GetContext(call); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3646 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3647 std::list<std::string> studies; |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3648 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3649 bool reconstructFiles = GetReconstructFilesField(call); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3650 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3651 for (std::list<std::string>::const_iterator |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3652 study = studies.begin(); study != studies.end(); ++study) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3653 { |
|
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5485
diff
changeset
|
3654 ServerToolbox::ReconstructResource(context, *study, reconstructFiles, false, ResourceType_Study /* dummy */); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3655 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3656 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3657 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3658 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3659 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3660 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3661 static void GetBulkChildren(std::set<std::string>& target, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3662 ServerIndex& index, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3663 const std::set<std::string>& source) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3664 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3665 target.clear(); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3666 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3667 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3668 it = source.begin(); it != source.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3669 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3670 std::list<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3671 index.GetChildren(children, *it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3672 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3673 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3674 child = children.begin(); child != children.end(); ++child) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3675 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3676 target.insert(*child); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3677 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3678 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3679 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3680 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3681 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3682 static void AddMetadata(Json::Value& target, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3683 ServerIndex& index, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3684 const std::string& resource, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3685 ResourceType level) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3686 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3687 target = Json::objectValue; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3688 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3689 std::map<MetadataType, std::string> content; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3690 index.GetAllMetadata(content, resource, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3691 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3692 for (std::map<MetadataType, std::string>::const_iterator |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3693 it = content.begin(); it != content.end(); ++it) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3694 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3695 target[EnumerationToString(it->first)] = it->second; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3696 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3697 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3698 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3699 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3700 static void BulkContent(RestApiPostCall& call) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3701 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3702 static const char* const LEVEL = "Level"; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3703 static const char* const METADATA = "Metadata"; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3704 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3705 if (call.IsDocumentation()) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3706 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3707 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3708 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3709 call.GetDocumentation() |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3710 .SetTag("System") |
| 4879 | 3711 .SetSummary("Describe a set of resources") |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3712 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3713 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3714 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3715 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3716 "`Instance`). Orthanc will loop over the items inside `Resources`, and explore upward or " |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3717 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3718 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3719 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3720 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3721 "whose identifiers are provided in the `Resources` field, in one single call."); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3722 return; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3723 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3724 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3725 Json::Value request; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3726 if (!call.ParseJsonRequest(request) || |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3727 request.type() != Json::objectValue) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3728 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3729 throw OrthancException(ErrorCode_BadRequest, |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3730 "The body must contain a JSON object"); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3731 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3732 else |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3733 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3734 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3735 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3736 bool metadata = true; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3737 if (request.isMember(METADATA)) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3738 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3739 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3740 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3741 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3742 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3743 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3744 Json::Value answer = Json::arrayValue; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3745 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3746 if (request.isMember(LEVEL)) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3747 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3748 // Complex case: Need to explore the DICOM hierarchy |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3749 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3750 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3751 std::set<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3752 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3753 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3754 std::set<std::string> interest; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3755 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3756 assert(ResourceType_Patient < ResourceType_Study && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3757 ResourceType_Study < ResourceType_Series && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3758 ResourceType_Series < ResourceType_Instance); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3759 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3760 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3761 it = resources.begin(); it != resources.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3762 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3763 ResourceType type; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3764 if (index.LookupResourceType(type, *it)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3765 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3766 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3767 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3768 // This resource is already from the level of interest |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3769 interest.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3770 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3771 else if (type < level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3772 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3773 // Need to explore children |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3774 std::set<std::string> current; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3775 current.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3776 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3777 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3778 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3779 std::set<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3780 GetBulkChildren(children, index, current); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3781 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3782 type = GetChildResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3783 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3784 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3785 for (std::set<std::string>::const_iterator |
| 4716 | 3786 it2 = children.begin(); it2 != children.end(); ++it2) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3787 { |
| 4716 | 3788 interest.insert(*it2); |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3789 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3790 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3791 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3792 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3793 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3794 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3795 current.swap(children); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3796 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3797 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3798 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3799 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3800 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3801 // Need to explore parents |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3802 std::string current = *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3803 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3804 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3805 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3806 std::string parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3807 if (index.LookupParent(parent, current)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3808 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3809 type = GetParentResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3810 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3811 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3812 interest.insert(parent); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3813 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3814 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3815 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3816 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3817 current = parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3818 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3819 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3820 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3821 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3822 break; // The resource has been deleted during the exploration |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3823 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3824 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3825 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3826 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3827 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3828 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3829 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3830 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3831 } |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3832 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3833 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3834 it = interest.begin(); it != interest.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3835 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3836 Json::Value item; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3837 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3838 |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3839 if (OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3840 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3841 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3842 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3843 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3844 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3845 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3846 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3847 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3848 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3849 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3850 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3851 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3852 // Simple case: We return the queried resources as such |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3853 std::list<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3854 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3855 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3856 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3857 it = resources.begin(); it != resources.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3858 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3859 ResourceType level; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3860 Json::Value item; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3861 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3862 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3863 if (index.LookupResourceType(level, *it) && |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3864 OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3865 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3866 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3867 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3868 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3869 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3870 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3871 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3872 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3873 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3874 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3875 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3876 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3877 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3878 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3879 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3880 call.GetOutput().AnswerJson(answer); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3881 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3882 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3883 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3884 |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3885 static void BulkDelete(RestApiPostCall& call) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3886 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3887 if (call.IsDocumentation()) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3888 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3889 call.GetDocumentation() |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3890 .SetTag("System") |
| 4879 | 3891 .SetSummary("Delete a set of resources") |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3892 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3893 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3894 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3895 "whose identifiers are provided in the `Resources` field."); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3896 return; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3897 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3898 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3899 ServerContext& context = OrthancRestApi::GetContext(call); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3900 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3901 Json::Value request; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3902 if (!call.ParseJsonRequest(request) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3903 request.type() != Json::objectValue) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3904 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3905 throw OrthancException(ErrorCode_BadRequest, |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3906 "The body must contain a JSON object"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3907 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3908 else |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3909 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3910 std::set<std::string> resources; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3911 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3912 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3913 for (std::set<std::string>::const_iterator |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3914 it = resources.begin(); it != resources.end(); ++it) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3915 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3916 ResourceType type; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3917 Json::Value remainingAncestor; // Unused |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3918 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3919 if (!context.GetIndex().LookupResourceType(type, *it) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3920 !context.DeleteResource(remainingAncestor, *it, type)) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3921 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3922 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3923 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3924 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3925 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3926 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3927 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3928 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3929 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3930 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3931 void OrthancRestApi::RegisterResources() |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3932 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3933 Register("/instances", ListResources<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3934 Register("/patients", ListResources<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3935 Register("/series", ListResources<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3936 Register("/studies", ListResources<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3937 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3938 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3939 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3940 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3941 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3942 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3943 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3944 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3945 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3946 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3947 Register("/instances/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3948 Register("/patients/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3949 Register("/studies/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3950 Register("/series/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3951 |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3952 Register("/patients/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3953 Register("/series/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3954 Register("/studies/{id}/shared-tags", GetSharedTags); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
3955 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3956 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3957 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3958 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3959 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3960 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3961 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3962 Register("/instances/{id}/file", GetInstanceFile); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3963 Register("/instances/{id}/export", ExportInstanceFile); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3964 Register("/instances/{id}/tags", GetInstanceTags); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3965 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3966 Register("/instances/{id}/frames", ListFrames); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3967 |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
3968 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3969 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3970 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3971 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3972 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3973 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3974 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3975 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3976 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
3977 Register("/instances/{id}/frames/{frame}/numpy", GetNumpyFrame); // New in Orthanc 1.10.0 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3978 Register("/instances/{id}/pdf", ExtractPdf); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3979 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3980 Register("/instances/{id}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3981 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3982 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3983 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3984 Register("/instances/{id}/matlab", GetMatlabImage); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3985 Register("/instances/{id}/header", GetInstanceHeader); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
3986 Register("/instances/{id}/numpy", GetNumpyInstance); // New in Orthanc 1.10.0 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3987 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3988 Register("/patients/{id}/protected", IsProtectedPatient); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3989 Register("/patients/{id}/protected", SetPatientProtection); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3990 |
| 4409 | 3991 std::vector<std::string> resourceTypes; |
| 3992 resourceTypes.push_back("patients"); | |
| 3993 resourceTypes.push_back("studies"); | |
| 3994 resourceTypes.push_back("series"); | |
| 3995 resourceTypes.push_back("instances"); | |
| 3996 | |
| 3997 for (size_t i = 0; i < resourceTypes.size(); i++) | |
| 3998 { | |
| 3999 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
| 4000 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
| 4001 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
| 4002 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4003 |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4004 // New in Orthanc 1.12.0 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4005 Register("/" + resourceTypes[i] + "/{id}/labels", ListLabels); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4006 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", GetLabel); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4007 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", RemoveLabel); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4008 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", AddLabel); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4009 |
| 4409 | 4010 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
| 4011 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
| 4012 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
| 4013 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
| 4014 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
| 4015 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
| 4016 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
| 4017 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
| 4018 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
| 4019 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
| 4020 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
| 4021 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
| 4022 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
4023 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/info", GetAttachmentInfo); |
| 4409 | 4024 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); |
| 4025 } | |
| 782 | 4026 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4027 Register("/tools/invalidate-tags", InvalidateTags); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4028 Register("/tools/lookup", Lookup); |
| 1354 | 4029 Register("/tools/find", Find); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4030 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4031 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4032 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4033 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4034 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4035 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4036 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4037 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4038 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4039 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4040 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4041 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4042 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4043 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4044 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4045 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4046 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4047 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4048 |
| 782 | 4049 Register("/instances/{id}/content/*", GetRawContent); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4050 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4051 Register("/series/{id}/ordered-slices", OrderSlices); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4052 Register("/series/{id}/numpy", GetNumpySeries); // New in Orthanc 1.10.0 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4053 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4054 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4055 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4056 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4057 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4058 Register("/tools/reconstruct", ReconstructAllResources); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4059 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4060 Register("/tools/bulk-content", BulkContent); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4061 Register("/tools/bulk-delete", BulkDelete); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4062 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4063 } |