Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 5274:e5b0bd6b2242
Added option "?numeric" if listing metadata
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Fri, 14 Apr 2023 12:12:34 +0200 |
parents | a7d95f951f8a |
children | 8686476e9d12 |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU General Public License |
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "../PrecompiledHeadersServer.h" |
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24 #include "OrthancRestApi.h" |
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25 |
4045 | 26 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
27 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
28 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
29 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
30 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
31 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
32 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
33 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
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34 #include "../../../OrthancFramework/Sources/Images/NumpyWriter.h" |
4045 | 35 #include "../../../OrthancFramework/Sources/Logging.h" |
36 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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37 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
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39 #include "../OrthancConfiguration.h" |
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40 #include "../Search/DatabaseLookup.h" |
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41 #include "../ServerContext.h" |
2131 | 42 #include "../ServerToolbox.h" |
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43 #include "../SliceOrdering.h" |
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44 |
3687 | 45 // This "include" is mandatory for Release builds using Linux Standard Base |
46 #include <boost/math/special_functions/round.hpp> | |
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47 #include <boost/shared_ptr.hpp> |
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48 |
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49 /** |
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50 * This semaphore is used to limit the number of concurrent HTTP |
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51 * requests on CPU-intensive routes of the REST API, in order to |
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52 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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53 **/ |
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54 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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55 |
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56 |
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57 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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58 |
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59 static const char* const IGNORE_LENGTH = "ignore-length"; |
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60 static const char* const RECONSTRUCT_FILES = "ReconstructFiles"; |
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61 |
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62 |
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63 namespace Orthanc |
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64 { |
4415 | 65 static std::string GetDocumentationSampleResource(ResourceType type) |
66 { | |
67 switch (type) | |
68 { | |
69 case Orthanc::ResourceType_Instance: | |
70 return "https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2"; | |
71 break; | |
72 | |
73 case Orthanc::ResourceType_Series: | |
74 return "https://demo.orthanc-server.com/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; | |
75 break; | |
76 | |
77 case Orthanc::ResourceType_Study: | |
78 return "https://demo.orthanc-server.com/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; | |
79 break; | |
80 | |
81 case Orthanc::ResourceType_Patient: | |
82 return "https://demo.orthanc-server.com/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; | |
83 break; | |
84 | |
85 default: | |
86 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
87 } | |
88 } | |
89 | |
90 | |
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91 static void AnswerDicomAsJson(RestApiCall& call, |
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92 const Json::Value& dicom, |
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93 DicomToJsonFormat mode) |
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94 { |
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95 if (mode != DicomToJsonFormat_Full) |
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96 { |
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97 Json::Value simplified; |
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98 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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99 call.GetOutput().AnswerJson(simplified); |
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100 } |
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101 else |
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102 { |
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103 call.GetOutput().AnswerJson(dicom); |
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104 } |
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105 } |
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106 |
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107 |
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108 static void ParseSetOfTags(std::set<DicomTag>& target, |
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109 const RestApiGetCall& call, |
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110 const std::string& argument) |
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111 { |
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112 target.clear(); |
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113 |
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114 if (call.HasArgument(argument)) |
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115 { |
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116 std::vector<std::string> tags; |
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117 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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118 |
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119 for (size_t i = 0; i < tags.size(); i++) |
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120 { |
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121 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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122 } |
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123 } |
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124 } |
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125 |
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126 |
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127 // List all the patients, studies, series or instances ---------------------- |
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128 |
1354 | 129 static void AnswerListOfResources(RestApiOutput& output, |
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130 ServerContext& context, |
1354 | 131 const std::list<std::string>& resources, |
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132 const std::map<std::string, std::string>& instancesIds, // optional: the id of an instance for each found resource. |
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133 const std::map<std::string, boost::shared_ptr<DicomMap> >& resourcesMainDicomTags, // optional: all tags read from DB for a resource (current level and upper levels) |
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134 const std::map<std::string, boost::shared_ptr<Json::Value> >& resourcesDicomAsJson, // optional: the dicom-as-json for each resource |
1354 | 135 ResourceType level, |
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136 bool expand, |
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137 DicomToJsonFormat format, |
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138 const std::set<DicomTag>& requestedTags, |
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139 bool allowStorageAccess) |
1354 | 140 { |
141 Json::Value answer = Json::arrayValue; | |
142 | |
143 for (std::list<std::string>::const_iterator | |
1384 | 144 resource = resources.begin(); resource != resources.end(); ++resource) |
1354 | 145 { |
146 if (expand) | |
147 { | |
4554 | 148 Json::Value expanded; |
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149 |
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150 std::map<std::string, std::string>::const_iterator instanceId = instancesIds.find(*resource); |
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151 if (instanceId != instancesIds.end()) // if it is found in instancesIds, it is also in resourcesDicomAsJson and mainDicomTags |
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152 { |
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153 // reuse data already collected before (e.g during lookup) |
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154 std::map<std::string, boost::shared_ptr<DicomMap> >::const_iterator mainDicomTags = resourcesMainDicomTags.find(*resource); |
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155 std::map<std::string, boost::shared_ptr<Json::Value> >::const_iterator dicomAsJson = resourcesDicomAsJson.find(*resource); |
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156 |
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157 context.ExpandResource(expanded, *resource, |
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158 *(mainDicomTags->second.get()), |
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159 instanceId->second, |
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160 dicomAsJson->second.get(), |
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161 level, format, requestedTags, allowStorageAccess); |
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162 } |
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163 else |
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164 { |
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165 context.ExpandResource(expanded, *resource, level, format, requestedTags, allowStorageAccess); |
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166 } |
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167 |
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168 if (expanded.type() == Json::objectValue) |
1354 | 169 { |
4554 | 170 answer.append(expanded); |
1354 | 171 } |
172 } | |
173 else | |
174 { | |
175 answer.append(*resource); | |
176 } | |
177 } | |
178 | |
179 output.AnswerJson(answer); | |
180 } | |
181 | |
182 | |
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183 static void AnswerListOfResources(RestApiOutput& output, |
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184 ServerContext& context, |
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185 const std::list<std::string>& resources, |
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186 ResourceType level, |
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187 bool expand, |
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188 DicomToJsonFormat format, |
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189 const std::set<DicomTag>& requestedTags, |
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190 bool allowStorageAccess) |
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191 { |
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192 std::map<std::string, std::string> unusedInstancesIds; |
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193 std::map<std::string, boost::shared_ptr<DicomMap> > unusedResourcesMainDicomTags; |
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194 std::map<std::string, boost::shared_ptr<Json::Value> > unusedResourcesDicomAsJson; |
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195 |
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196 AnswerListOfResources(output, context, resources, unusedInstancesIds, unusedResourcesMainDicomTags, unusedResourcesDicomAsJson, level, expand, format, requestedTags, allowStorageAccess); |
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197 } |
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198 |
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199 |
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200 template <enum ResourceType resourceType> |
974 | 201 static void ListResources(RestApiGetCall& call) |
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202 { |
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203 if (call.IsDocumentation()) |
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204 { |
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205 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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206 OrthancRestApi::DocumentRequestedTags(call); |
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207 |
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208 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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209 call.GetDocumentation() |
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210 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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211 .SetSummary("List the available " + resources) |
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212 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
4403 | 213 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
214 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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215 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
4403 | 216 "If present, retrieve detailed information about the individual " + resources, false) |
4404 | 217 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
218 "about the reported " + resources + " (if `expand` argument is provided)") | |
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219 .SetHttpGetSample("https://demo.orthanc-server.com/" + resources + "?since=0&limit=2", true); |
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220 return; |
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221 } |
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222 |
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223 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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224 ServerContext& context = OrthancRestApi::GetContext(call); |
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225 |
1354 | 226 std::list<std::string> result; |
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227 |
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228 std::set<DicomTag> requestedTags; |
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229 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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230 |
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231 if (call.HasArgument("limit") || |
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232 call.HasArgument("since")) |
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233 { |
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234 if (!call.HasArgument("limit")) |
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235 { |
2955 | 236 throw OrthancException(ErrorCode_BadRequest, |
237 "Missing \"limit\" argument for GET request against: " + | |
238 call.FlattenUri()); | |
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239 } |
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240 |
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241 if (!call.HasArgument("since")) |
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242 { |
2955 | 243 throw OrthancException(ErrorCode_BadRequest, |
244 "Missing \"since\" argument for GET request against: " + | |
245 call.FlattenUri()); | |
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246 } |
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247 |
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248 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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249 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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250 index.GetAllUuids(result, resourceType, since, limit); |
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251 } |
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252 else |
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253 { |
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254 index.GetAllUuids(result, resourceType); |
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255 } |
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256 |
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257 AnswerListOfResources(call.GetOutput(), context, result, resourceType, call.HasArgument("expand"), |
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258 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), |
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259 requestedTags, |
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260 true /* allowStorageAccess */); |
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261 } |
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262 |
4409 | 263 |
264 | |
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265 template <enum ResourceType resourceType> |
974 | 266 static void GetSingleResource(RestApiGetCall& call) |
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267 { |
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268 if (call.IsDocumentation()) |
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269 { |
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270 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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271 OrthancRestApi::DocumentRequestedTags(call); |
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272 |
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273 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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274 call.GetDocumentation() |
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275 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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276 .SetSummary("Get information about some " + resource) |
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277 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
4404 | 278 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
4409 | 279 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
280 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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281 return; |
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282 } |
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283 |
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284 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
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285 |
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286 std::set<DicomTag> requestedTags; |
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287 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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288 |
4554 | 289 Json::Value json; |
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290 if (OrthancRestApi::GetContext(call).ExpandResource( |
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Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
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291 json, call.GetUriComponent("id", ""), resourceType, format, requestedTags, true /* allowStorageAccess */)) |
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292 { |
4554 | 293 call.GetOutput().AnswerJson(json); |
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294 } |
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295 } |
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296 |
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297 template <enum ResourceType resourceType> |
974 | 298 static void DeleteSingleResource(RestApiDeleteCall& call) |
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299 { |
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300 if (call.IsDocumentation()) |
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301 { |
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302 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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303 call.GetDocumentation() |
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304 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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305 .SetSummary("Delete some " + resource) |
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306 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
4404 | 307 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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308 return; |
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309 } |
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310 |
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311 Json::Value remainingAncestor; |
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312 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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313 { |
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314 call.GetOutput().AnswerJson(remainingAncestor); |
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315 } |
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316 } |
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317 |
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318 |
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319 // Get information about a single patient ----------------------------------- |
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320 |
974 | 321 static void IsProtectedPatient(RestApiGetCall& call) |
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322 { |
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323 if (call.IsDocumentation()) |
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324 { |
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325 call.GetDocumentation() |
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326 .SetTag("Patients") |
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327 .SetSummary("Is the patient protected against recycling?") |
4404 | 328 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
4403 | 329 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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330 return; |
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331 } |
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332 |
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333 std::string publicId = call.GetUriComponent("id", ""); |
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334 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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335 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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336 } |
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337 |
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338 |
974 | 339 static void SetPatientProtection(RestApiPutCall& call) |
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340 { |
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341 if (call.IsDocumentation()) |
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342 { |
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343 call.GetDocumentation() |
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344 .SetTag("Patients") |
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345 .SetSummary("Protect one patient against recycling") |
4403 | 346 .SetDescription("Check out configuration options `MaximumStorageSize` and `MaximumPatientCount`") |
4404 | 347 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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348 return; |
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349 } |
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350 |
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351 ServerContext& context = OrthancRestApi::GetContext(call); |
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352 |
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353 std::string publicId = call.GetUriComponent("id", ""); |
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354 |
4473
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355 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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356 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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357 } |
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358 |
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359 |
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360 // Get information about a single instance ---------------------------------- |
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361 |
974 | 362 static void GetInstanceFile(RestApiGetCall& call) |
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363 { |
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364 if (call.IsDocumentation()) |
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365 { |
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366 call.GetDocumentation() |
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367 .SetTag("Instances") |
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368 .SetSummary("Download DICOM") |
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369 .SetDescription("Download one DICOM instance") |
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370 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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371 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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372 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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373 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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374 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
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375 return; |
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376 } |
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377 |
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378 ServerContext& context = OrthancRestApi::GetContext(call); |
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379 |
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380 std::string publicId = call.GetUriComponent("id", ""); |
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381 |
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382 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
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383 if (accept != call.GetHttpHeaders().end()) |
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384 { |
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385 // New in Orthanc 1.5.4 |
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386 try |
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387 { |
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388 MimeType mime = StringToMimeType(accept->second.c_str()); |
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389 |
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390 if (mime == MimeType_DicomWebJson || |
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391 mime == MimeType_DicomWebXml) |
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392 { |
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393 DicomWebJsonVisitor visitor; |
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394 |
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395 { |
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396 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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397 locker.GetDicom().Apply(visitor); |
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398 } |
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399 |
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400 if (mime == MimeType_DicomWebJson) |
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401 { |
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402 std::string s = visitor.GetResult().toStyledString(); |
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403 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
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404 } |
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405 else |
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406 { |
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407 std::string xml; |
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408 visitor.FormatXml(xml); |
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409 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
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410 } |
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411 |
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412 return; |
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413 } |
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414 } |
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415 catch (OrthancException&) |
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416 { |
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417 } |
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418 } |
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419 |
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420 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
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421 } |
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422 |
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423 |
974 | 424 static void ExportInstanceFile(RestApiPostCall& call) |
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refactoring of OrthancRestApi
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425 { |
4421 | 426 if (call.IsDocumentation()) |
427 { | |
428 call.GetDocumentation() | |
429 .SetTag("Instances") | |
430 .SetSummary("Write DICOM onto filesystem") | |
5200
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New configuration option 'RestApiWriteToFileSystemEnabled'
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431 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running. This is insecure for " |
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New configuration option 'RestApiWriteToFileSystemEnabled'
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432 "Orthanc servers that are remotely accessible since one could overwrite any system file. " |
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New configuration option 'RestApiWriteToFileSystemEnabled'
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433 "Since Orthanc 1.12.0, this route is disabled by default and can be enabled thanks to " |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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434 "the `RestApiWriteToFileSystemEnabled` configuration.") |
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435 .AddRequestType(MimeType_PlainText, "The Lua script to be executed") |
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New configuration option 'RestApiWriteToFileSystemEnabled'
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436 |
4421 | 437 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
438 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
439 return; | |
440 } | |
441 | |
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442 ServerContext& context = OrthancRestApi::GetContext(call); |
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443 |
5200
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New configuration option 'RestApiWriteToFileSystemEnabled'
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444 if (!context.IsRestApiWriteToFileSystemEnabled()) |
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445 { |
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446 LOG(ERROR) << "The URI /instances/../export is disallowed for security, " |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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447 << "check your configuration option `RestApiWriteToFileSystemEnabled`"; |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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448 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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New configuration option 'RestApiWriteToFileSystemEnabled'
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449 return; |
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New configuration option 'RestApiWriteToFileSystemEnabled'
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|
450 } |
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New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
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|
451 |
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|
452 std::string publicId = call.GetUriComponent("id", ""); |
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|
453 |
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|
454 std::string dicom; |
2124 | 455 context.ReadDicom(dicom, publicId); |
751
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|
456 |
1446
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1437
diff
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|
457 std::string target; |
8dc80ba768aa
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|
458 call.BodyToString(target); |
2140 | 459 SystemToolbox::WriteFile(dicom, target); |
751
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refactoring of OrthancRestApi
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diff
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|
460 |
2908
9d277f8ad698
new enumeration: MimeType
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2905
diff
changeset
|
461 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
751
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refactoring of OrthancRestApi
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|
462 } |
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parents:
diff
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|
463 |
5197fd35333c
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parents:
diff
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|
464 |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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parents:
2447
diff
changeset
|
465 template <DicomToJsonFormat format> |
4697
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diff
changeset
|
466 static void GetInstanceTagsInternal(RestApiGetCall& call) |
751
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467 { |
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|
468 ServerContext& context = OrthancRestApi::GetContext(call); |
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|
469 |
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diff
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470 std::string publicId = call.GetUriComponent("id", ""); |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
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parents:
2408
diff
changeset
|
471 |
e4045b3c9772
ignore-length argument if retrieving DICOM tags
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2408
diff
changeset
|
472 std::set<DicomTag> ignoreTagLength; |
4722
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added missing documentation of "ignore-length" in "/instances/{id}/tags"
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4716
diff
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|
473 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
751
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refactoring of OrthancRestApi
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diff
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|
474 |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
475 if (format != DicomToJsonFormat_Full || |
2409
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ignore-length argument if retrieving DICOM tags
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2408
diff
changeset
|
476 !ignoreTagLength.empty()) |
751
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477 { |
1146
200fcac0deb4
optimization for access to attachments
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diff
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478 Json::Value full; |
2409
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diff
changeset
|
479 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
480 AnswerDicomAsJson(call, full, format); |
751
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|
481 } |
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|
482 else |
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diff
changeset
|
483 { |
3973
d86bddb50972
fix spelling errors according to debian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3928
diff
changeset
|
484 // This path allows one to avoid the JSON decoding if no |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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485 // simplification is asked, and if no "ignore-length" argument |
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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486 // is present |
4513
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diff
changeset
|
487 Json::Value full; |
2127 | 488 context.ReadDicomAsJson(full, publicId); |
4513
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489 call.GetOutput().AnswerJson(full); |
751
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|
490 } |
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|
491 } |
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diff
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|
492 |
964
cc7a4ae474c1
simplify has a GET argument
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963
diff
changeset
|
493 |
4697
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
494 static void GetInstanceTags(RestApiGetCall& call) |
964
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simplify has a GET argument
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diff
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|
495 { |
4404 | 496 if (call.IsDocumentation()) |
497 { | |
4697
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
498 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
4404 | 499 call.GetDocumentation() |
500 .SetTag("Instances") | |
501 .SetSummary("Get DICOM tags") | |
502 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
503 "combines hexadecimal tags with human-readable description.") | |
504 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
4722
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4716
diff
changeset
|
505 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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added missing documentation of "ignore-length" in "/instances/{id}/tags"
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diff
changeset
|
506 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
4404 | 507 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
4415 | 508 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
4404 | 509 return; |
510 } | |
511 | |
4697
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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4694
diff
changeset
|
512 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
964
cc7a4ae474c1
simplify has a GET argument
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parents:
963
diff
changeset
|
513 { |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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514 case DicomToJsonFormat_Human: |
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515 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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516 break; |
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New option "?short" to list DICOM tags using their hexadecimal ID
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517 |
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New option "?short" to list DICOM tags using their hexadecimal ID
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518 case DicomToJsonFormat_Short: |
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519 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call); |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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520 break; |
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New option "?short" to list DICOM tags using their hexadecimal ID
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521 |
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New option "?short" to list DICOM tags using their hexadecimal ID
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522 case DicomToJsonFormat_Full: |
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523 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call); |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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524 break; |
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New option "?short" to list DICOM tags using their hexadecimal ID
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525 |
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526 default: |
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New option "?short" to list DICOM tags using their hexadecimal ID
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527 throw OrthancException(ErrorCode_InternalError); |
964
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simplify has a GET argument
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528 } |
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529 } |
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530 |
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531 |
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532 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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533 { |
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534 if (call.IsDocumentation()) |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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535 { |
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536 call.GetDocumentation() |
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537 .SetTag("Instances") |
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538 .SetSummary("Get human-readable tags") |
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539 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
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540 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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541 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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542 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
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543 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
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544 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
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545 return; |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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546 } |
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547 else |
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548 { |
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549 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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550 } |
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551 } |
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552 |
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553 |
974 | 554 static void ListFrames(RestApiGetCall& call) |
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555 { |
4414 | 556 if (call.IsDocumentation()) |
557 { | |
558 call.GetDocumentation() | |
559 .SetTag("Instances") | |
560 .SetSummary("List available frames") | |
561 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
562 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
563 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
564 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); | |
565 return; | |
566 } | |
567 | |
1950
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568 std::string publicId = call.GetUriComponent("id", ""); |
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569 |
1950
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570 unsigned int numberOfFrames; |
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571 |
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572 { |
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573 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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574 numberOfFrames = locker.GetDicom().GetFramesCount(); |
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575 } |
1950
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576 |
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577 Json::Value result = Json::arrayValue; |
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578 for (unsigned int i = 0; i < numberOfFrames; i++) |
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579 { |
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580 result.append(i); |
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581 } |
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582 |
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return a single raw frame from DICOM videos
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583 call.GetOutput().AnswerJson(result); |
751
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584 } |
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585 |
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586 |
1784
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|
587 namespace |
1781
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588 { |
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589 class ImageToEncode |
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590 { |
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591 private: |
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592 std::unique_ptr<ImageAccessor>& image_; |
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Refactoring leading to speedups with custom image decoders
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|
593 ImageExtractionMode mode_; |
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594 bool invert_; |
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595 MimeType format_; |
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Refactoring leading to speedups with custom image decoders
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|
596 std::string answer_; |
1784
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597 |
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598 public: |
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599 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
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600 ImageExtractionMode mode, |
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601 bool invert) : |
1902
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Refactoring leading to speedups with custom image decoders
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diff
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602 image_(image), |
2281
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|
603 mode_(mode), |
4205 | 604 invert_(invert), |
605 format_(MimeType_Binary) | |
1784
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606 { |
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607 } |
2dbf25006f88
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|
608 |
1902
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Refactoring leading to speedups with custom image decoders
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changeset
|
609 void Answer(RestApiOutput& output) |
1784
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610 { |
1902
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|
611 output.AnswerBuffer(answer_, format_); |
1784
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612 } |
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613 |
1902
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|
614 void EncodeUsingPng() |
1784
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615 { |
2908
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616 format_ = MimeType_Png; |
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617 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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618 } |
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619 |
2699
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|
620 void EncodeUsingPam() |
52217dc47a4e
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621 { |
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622 format_ = MimeType_Pam; |
2699
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|
623 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
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624 } |
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
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2622
diff
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|
625 |
1902
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626 void EncodeUsingJpeg(uint8_t quality) |
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627 { |
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628 format_ = MimeType_Jpeg; |
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629 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
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630 } |
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631 }; |
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632 |
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633 class EncodePng : public HttpContentNegociation::IHandler |
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634 { |
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635 private: |
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636 ImageToEncode& image_; |
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637 |
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638 public: |
4205 | 639 explicit EncodePng(ImageToEncode& image) : image_(image) |
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640 { |
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641 } |
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642 |
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643 virtual void Handle(const std::string& type, |
4205 | 644 const std::string& subtype) ORTHANC_OVERRIDE |
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645 { |
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646 assert(type == "image"); |
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647 assert(subtype == "png"); |
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648 image_.EncodeUsingPng(); |
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649 } |
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650 }; |
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651 |
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652 class EncodePam : public HttpContentNegociation::IHandler |
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653 { |
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654 private: |
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655 ImageToEncode& image_; |
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656 |
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657 public: |
4205 | 658 explicit EncodePam(ImageToEncode& image) : image_(image) |
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659 { |
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660 } |
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661 |
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662 virtual void Handle(const std::string& type, |
4205 | 663 const std::string& subtype) ORTHANC_OVERRIDE |
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664 { |
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665 assert(type == "image"); |
2780 | 666 assert(subtype == "x-portable-arbitrarymap"); |
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667 image_.EncodeUsingPam(); |
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668 } |
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669 }; |
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670 |
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671 class EncodeJpeg : public HttpContentNegociation::IHandler |
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672 { |
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673 private: |
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674 ImageToEncode& image_; |
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675 unsigned int quality_; |
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676 |
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677 public: |
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678 EncodeJpeg(ImageToEncode& image, |
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679 const RestApiGetCall& call) : |
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680 image_(image) |
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681 { |
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682 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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683 bool ok = false; |
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684 |
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685 try |
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686 { |
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687 quality_ = boost::lexical_cast<unsigned int>(v); |
1847 | 688 ok = (quality_ >= 1 && quality_ <= 100); |
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689 } |
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690 catch (boost::bad_lexical_cast&) |
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691 { |
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692 } |
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693 |
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694 if (!ok) |
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695 { |
2955 | 696 throw OrthancException( |
697 ErrorCode_BadRequest, | |
698 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
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699 } |
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700 } |
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701 |
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702 virtual void Handle(const std::string& type, |
4205 | 703 const std::string& subtype) ORTHANC_OVERRIDE |
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704 { |
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705 assert(type == "image"); |
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706 assert(subtype == "jpeg"); |
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707 image_.EncodeUsingJpeg(quality_); |
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708 } |
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709 }; |
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710 } |
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711 |
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712 |
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713 namespace |
3600
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714 { |
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715 class IDecodedFrameHandler : public boost::noncopyable |
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716 { |
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717 public: |
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718 virtual ~IDecodedFrameHandler() |
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719 { |
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720 } |
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721 |
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722 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
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723 virtual void Handle(RestApiGetCall& call, |
3712
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724 std::unique_ptr<ImageAccessor>& decoded, |
4777
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725 const ParsedDicomFile* dicom, |
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726 unsigned int frame) = 0; |
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727 |
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728 virtual bool RequiresDicomTags() const = 0; |
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729 |
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730 static void Apply(RestApiGetCall& call, |
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731 IDecodedFrameHandler& handler, |
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732 ImageExtractionMode mode /* for generation of documentation */, |
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733 bool isRendered /* for generation of documentation */) |
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734 { |
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735 if (call.IsDocumentation()) |
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736 { |
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737 std::string m; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
738 if (!isRendered) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
739 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
740 switch (mode) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
741 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
742 case ImageExtractionMode_Preview: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
743 m = "preview"; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
744 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
745 case ImageExtractionMode_UInt8: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
746 m = "uint8"; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
747 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
748 case ImageExtractionMode_UInt16: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
749 m = "uint16"; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
750 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
751 case ImageExtractionMode_Int16: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
752 m = "int16"; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
753 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
754 default: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
755 throw OrthancException(ErrorCode_ParameterOutOfRange); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
756 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
757 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
758 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
759 std::string description; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
760 std::string verb = (isRendered ? "Render" : "Decode"); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
761 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
762 if (call.HasUriComponent("frame")) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
763 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
764 description = verb + " one frame of interest from the given DICOM instance."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
765 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
766 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
767 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
768 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
769 else |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
770 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
771 description = verb + " the first frame of the given DICOM instance."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
772 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
773 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
774 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
775 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
776 if (isRendered) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
777 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
778 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
779 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
780 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
781 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
782 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
783 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
784 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
785 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
786 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
787 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
788 else |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
789 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
790 switch (mode) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
791 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
792 case ImageExtractionMode_Preview: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
793 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
794 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
795 case ImageExtractionMode_UInt8: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
796 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
797 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
798 case ImageExtractionMode_UInt16: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
799 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
800 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
801 case ImageExtractionMode_Int16: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
802 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
803 "Negative values must be interpreted according to two's complement."); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
804 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
805 default: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
806 throw OrthancException(ErrorCode_ParameterOutOfRange); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
807 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
808 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
809 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
810 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
811 .SetTag("Instances") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
812 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
813 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
814 .SetHttpGetArgument("returnUnsupportedImage", RestApiCallDocumentation::Type_Boolean, "Returns an unsupported.png placeholder image if unable to provide the image instead of returning a 415 HTTP error (defaults to false)", false) |
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
815 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
816 .AddAnswerType(MimeType_Png, "PNG image") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
817 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
818 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
819 .SetDescription(description); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
820 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
821 return; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
822 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
823 |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
824 ServerContext& context = OrthancRestApi::GetContext(call); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
825 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
826 std::string frameId = call.GetUriComponent("frame", "0"); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
827 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
828 unsigned int frame; |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
829 try |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
830 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
831 frame = boost::lexical_cast<unsigned int>(frameId); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
832 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
833 catch (boost::bad_lexical_cast&) |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
834 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
835 return; |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
836 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
837 |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
838 std::unique_ptr<ImageAccessor> decoded; |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
839 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
840 try |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
841 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
842 std::string publicId = call.GetUriComponent("id", ""); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
843 |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
844 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
845 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
846 if (decoded.get() == NULL) |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
847 { |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
848 throw OrthancException(ErrorCode_NotImplemented, |
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849 "Cannot decode DICOM instance with ID: " + publicId); |
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850 } |
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|
851 |
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|
852 if (handler.RequiresDicomTags()) |
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|
853 { |
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diff
changeset
|
854 /** |
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855 * Retrieve a summary of the DICOM tags, which is |
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diff
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|
856 * necessary to deal with MONOCHROME1 photometric |
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857 * interpretation, and with windowing parameters. |
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ServerContext::DecodeDicomFrame()
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858 **/ |
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|
859 ServerContext::DicomCacheLocker locker(context, publicId); |
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860 handler.Handle(call, decoded, &locker.GetDicom(), frame); |
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861 } |
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862 else |
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863 { |
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|
864 handler.Handle(call, decoded, NULL, frame); |
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865 } |
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866 } |
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867 catch (OrthancException& e) |
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868 { |
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869 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
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870 e.GetErrorCode() == ErrorCode_UnknownResource) |
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871 { |
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872 // The frame number is out of the range for this DICOM |
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873 // instance, the resource is not existent |
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874 } |
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875 else |
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876 { |
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|
877 if (call.HasArgument("returnUnsupportedImage")) |
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878 { |
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|
879 std::string root = ""; |
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new option returnUnsupportedImage for /preview & /rendered routes
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diff
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880 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
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|
881 { |
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|
882 root += "../"; |
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diff
changeset
|
883 } |
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|
884 |
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|
885 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
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|
886 } |
4804
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|
887 else |
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|
888 { |
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|
889 call.GetOutput().SignalError(HttpStatus_415_UnsupportedMediaType); |
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|
890 } |
3683
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891 } |
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|
892 return; |
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893 } |
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894 |
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|
895 } |
3685
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|
896 |
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changeset
|
897 |
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changeset
|
898 static void DefaultHandler(RestApiGetCall& call, |
3712
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|
899 std::unique_ptr<ImageAccessor>& decoded, |
3685
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|
900 ImageExtractionMode mode, |
2cc34837d694
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|
901 bool invert) |
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|
902 { |
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|
903 ImageToEncode image(decoded, mode, invert); |
2cc34837d694
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|
904 |
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changeset
|
905 HttpContentNegociation negociation; |
2cc34837d694
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|
906 EncodePng png(image); |
2cc34837d694
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diff
changeset
|
907 negociation.Register(MIME_PNG, png); |
2cc34837d694
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changeset
|
908 |
2cc34837d694
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diff
changeset
|
909 EncodeJpeg jpeg(image, call); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
910 negociation.Register(MIME_JPEG, jpeg); |
2cc34837d694
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diff
changeset
|
911 |
2cc34837d694
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changeset
|
912 EncodePam pam(image); |
2cc34837d694
rendering of RGB24
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3683
diff
changeset
|
913 negociation.Register(MIME_PAM, pam); |
2cc34837d694
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diff
changeset
|
914 |
2cc34837d694
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3683
diff
changeset
|
915 if (negociation.Apply(call.GetHttpHeaders())) |
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diff
changeset
|
916 { |
2cc34837d694
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diff
changeset
|
917 image.Answer(call.GetOutput()); |
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diff
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|
918 } |
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changeset
|
919 } |
3683
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
920 }; |
3600
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changeset
|
921 |
4066998150ef
/instances/{id}/preview route now takes the windowing into account
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changeset
|
922 |
3683
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923 class GetImageHandler : public IDecodedFrameHandler |
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|
924 { |
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|
925 private: |
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changeset
|
926 ImageExtractionMode mode_; |
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|
927 |
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diff
changeset
|
928 public: |
4205 | 929 explicit GetImageHandler(ImageExtractionMode mode) : |
3683
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930 mode_(mode) |
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931 { |
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932 } |
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|
933 |
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changeset
|
934 virtual void Handle(RestApiGetCall& call, |
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|
935 std::unique_ptr<ImageAccessor>& decoded, |
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|
936 const ParsedDicomFile* dicom, |
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|
937 unsigned int frame) ORTHANC_OVERRIDE |
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938 { |
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939 bool invert = false; |
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940 |
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|
941 if (mode_ == ImageExtractionMode_Preview) |
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|
942 { |
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|
943 if (dicom == NULL) |
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944 { |
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|
945 throw OrthancException(ErrorCode_InternalError); |
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diff
changeset
|
946 } |
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|
947 |
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|
948 DicomMap tags; |
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4722
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changeset
|
949 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
950 |
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changeset
|
951 DicomImageInformation info(tags); |
3683
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952 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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|
953 } |
3600
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|
954 |
3685
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changeset
|
955 DefaultHandler(call, decoded, mode_, invert); |
3683
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956 } |
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|
957 |
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|
958 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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959 { |
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960 return mode_ == ImageExtractionMode_Preview; |
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diff
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|
961 } |
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|
962 }; |
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skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
963 |
3600
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/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
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diff
changeset
|
964 |
3683
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skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
965 class RenderedFrameHandler : public IDecodedFrameHandler |
3600
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/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
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diff
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|
966 { |
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diff
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|
967 private: |
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diff
changeset
|
968 static void GetUserArguments(double& windowWidth /* inout */, |
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
969 double& windowCenter /* inout */, |
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changeset
|
970 unsigned int& argWidth, |
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
971 unsigned int& argHeight, |
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
972 bool& smooth, |
4205 | 973 const RestApiGetCall& call) |
3690
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diff
changeset
|
974 { |
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diff
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|
975 static const char* ARG_WINDOW_CENTER = "window-center"; |
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
976 static const char* ARG_WINDOW_WIDTH = "window-width"; |
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
977 static const char* ARG_WIDTH = "width"; |
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diff
changeset
|
978 static const char* ARG_HEIGHT = "height"; |
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
979 static const char* ARG_SMOOTH = "smooth"; |
3600
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/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
980 |
4777
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
981 if (call.HasArgument(ARG_WINDOW_WIDTH) && |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
982 !SerializationToolbox::ParseDouble(windowWidth, call.GetArgument(ARG_WINDOW_WIDTH, ""))) |
3685
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rendering of RGB24
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diff
changeset
|
983 { |
4777
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
984 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
985 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
3685
2cc34837d694
rendering of RGB24
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diff
changeset
|
986 } |
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rendering of RGB24
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diff
changeset
|
987 |
4777
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
988 if (call.HasArgument(ARG_WINDOW_CENTER) && |
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
989 !SerializationToolbox::ParseDouble(windowCenter, call.GetArgument(ARG_WINDOW_CENTER, ""))) |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
990 { |
4777
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Support detection of windowing and rescale in Philips multiframe images
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parents:
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diff
changeset
|
991 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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Support detection of windowing and rescale in Philips multiframe images
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parents:
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diff
changeset
|
992 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
3685
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rendering of RGB24
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diff
changeset
|
993 } |
2cc34837d694
rendering of RGB24
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diff
changeset
|
994 |
3690
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
995 argWidth = 0; |
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
996 argHeight = 0; |
3685
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rendering of RGB24
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diff
changeset
|
997 |
3690
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implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
998 if (call.HasArgument(ARG_WIDTH)) |
3685
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
999 { |
2cc34837d694
rendering of RGB24
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diff
changeset
|
1000 try |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1001 { |
3690
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implementation of "/instances/.../rendered" for grayscale images
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parents:
3687
diff
changeset
|
1002 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
3685
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1003 if (tmp < 0) |
2cc34837d694
rendering of RGB24
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diff
changeset
|
1004 { |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1005 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1006 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
3685
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1007 } |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1008 else |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1009 { |
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1010 argWidth = static_cast<unsigned int>(tmp); |
3685
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1011 } |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1012 } |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1013 catch (boost::bad_lexical_cast&) |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1014 { |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1015 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1016 "Bad value for argument: " + std::string(ARG_WIDTH)); |
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1017 } |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1018 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1019 |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1020 if (call.HasArgument(ARG_HEIGHT)) |
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1021 { |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1022 try |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1023 { |
3690
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implementation of "/instances/.../rendered" for grayscale images
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parents:
3687
diff
changeset
|
1024 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1025 if (tmp < 0) |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1026 { |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1027 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
1028 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
3685
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1029 } |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1030 else |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1031 { |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
1032 argHeight = static_cast<unsigned int>(tmp); |
3685
2cc34837d694
rendering of RGB24
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diff
changeset
|
1033 } |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1034 } |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1035 catch (boost::bad_lexical_cast&) |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1036 { |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1037 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1038 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
3685
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
1039 } |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1040 } |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1041 |
3690
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implementation of "/instances/.../rendered" for grayscale images
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parents:
3687
diff
changeset
|
1042 smooth = false; |
3685
2cc34837d694
rendering of RGB24
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diff
changeset
|
1043 |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1044 if (call.HasArgument(ARG_SMOOTH)) |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1045 { |
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4460
diff
changeset
|
1046 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
3685
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1047 } |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
1048 } |
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1049 |
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1050 |
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
1051 public: |
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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parents:
3687
diff
changeset
|
1052 virtual void Handle(RestApiGetCall& call, |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
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parents:
3690
diff
changeset
|
1053 std::unique_ptr<ImageAccessor>& decoded, |
4777
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Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1054 const ParsedDicomFile* dicom, |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
1055 unsigned int frame) ORTHANC_OVERRIDE |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
1056 { |
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1057 if (dicom == NULL) |
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1058 { |
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1059 throw OrthancException(ErrorCode_InternalError); |
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1060 } |
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
1061 |
4777
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Support detection of windowing and rescale in Philips multiframe images
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parents:
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diff
changeset
|
1062 PhotometricInterpretation photometric; |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
1063 const bool invert = (dicom->LookupPhotometricInterpretation(photometric) && |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
1064 photometric == PhotometricInterpretation_Monochrome1); |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1065 |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
1066 double rescaleIntercept, rescaleSlope, windowCenter, windowWidth; |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
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parents:
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diff
changeset
|
1067 dicom->GetRescale(rescaleIntercept, rescaleSlope, frame); |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
1068 dicom->GetDefaultWindowing(windowCenter, windowWidth, frame); |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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1069 |
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|
1070 unsigned int argWidth, argHeight; |
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|
1071 bool smooth; |
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1072 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
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1073 |
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1074 unsigned int targetWidth = decoded->GetWidth(); |
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|
1075 unsigned int targetHeight = decoded->GetHeight(); |
3686 | 1076 |
1077 if (decoded->GetWidth() != 0 && | |
1078 decoded->GetHeight() != 0) | |
1079 { | |
1080 float ratio = 1; | |
1081 | |
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1082 if (argWidth != 0 && |
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|
1083 argHeight != 0) |
3686 | 1084 { |
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1085 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
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1086 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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1087 ratio = std::min(ratioX, ratioY); |
3686 | 1088 } |
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1089 else if (argWidth != 0) |
3686 | 1090 { |
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1091 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
3686 | 1092 } |
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1093 else if (argHeight != 0) |
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1094 { |
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1095 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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1096 } |
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1097 |
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1098 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
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1099 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
3686 | 1100 } |
1101 | |
5054
255b02c68908
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
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1102 if (decoded->GetFormat() == PixelFormat_RGB24 || decoded->GetFormat() == PixelFormat_RGB48) |
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1103 { |
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1104 if (targetWidth == decoded->GetWidth() && |
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1105 targetHeight == decoded->GetHeight()) |
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1106 { |
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1107 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
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1108 } |
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1109 else |
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1110 { |
3712
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1111 std::unique_ptr<ImageAccessor> resized( |
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1112 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
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1113 |
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1114 if (smooth && |
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1115 (targetWidth < decoded->GetWidth() || |
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1116 targetHeight < decoded->GetHeight())) |
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1117 { |
4065
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1118 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
3685
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1119 } |
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1120 |
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1121 ImageProcessing::Resize(*resized, *decoded); |
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1122 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
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1123 } |
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1124 } |
3686 | 1125 else |
1126 { | |
3690
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1127 // Grayscale image: (1) convert to Float32, (2) apply |
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1128 // windowing to get a Grayscale8, (3) possibly resize |
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1129 |
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|
1130 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
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1131 ImageProcessing::Convert(converted, *decoded); |
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1132 |
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1133 // Avoid divisions by zero |
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1134 if (windowWidth <= 1.0f) |
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1135 { |
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1136 windowWidth = 1; |
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1137 } |
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1138 |
4834
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download of numpy arrays from the REST API
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1139 if (std::abs(rescaleSlope) <= 0.0001) |
3690
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1140 { |
4834
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|
1141 rescaleSlope = 0.0001; |
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1142 } |
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1143 |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
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|
1144 const double scaling = 255.0 * rescaleSlope / windowWidth; |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1145 const double offset = (rescaleIntercept - windowCenter + windowWidth / 2.0) / rescaleSlope; |
3690
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|
1146 |
3712
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|
1147 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
4777
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1148 ImageProcessing::ShiftScale(*rescaled, converted, static_cast<float>(offset), static_cast<float>(scaling), false); |
3690
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|
1149 |
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|
1150 if (targetWidth == decoded->GetWidth() && |
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|
1151 targetHeight == decoded->GetHeight()) |
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|
1152 { |
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|
1153 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
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|
1154 } |
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1155 else |
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|
1156 { |
3712
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replacing std::auto_ptr by std::unique_ptr
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|
1157 std::unique_ptr<ImageAccessor> resized( |
3690
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|
1158 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
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|
1159 |
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|
1160 if (smooth && |
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|
1161 (targetWidth < decoded->GetWidth() || |
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|
1162 targetHeight < decoded->GetHeight())) |
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changeset
|
1163 { |
4065
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4055
diff
changeset
|
1164 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
3690
a9ce35d67c3c
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|
1165 } |
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|
1166 |
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changeset
|
1167 ImageProcessing::Resize(*resized, *rescaled); |
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changeset
|
1168 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
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|
1169 } |
3686 | 1170 } |
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1171 } |
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|
1172 |
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|
1173 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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|
1174 { |
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|
1175 return true; |
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1176 } |
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|
1177 }; |
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
1178 } |
4066998150ef
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changeset
|
1179 |
3683
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|
1180 |
751
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
1181 template <enum ImageExtractionMode mode> |
974 | 1182 static void GetImage(RestApiGetCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
1183 { |
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
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diff
changeset
|
1184 Semaphore::Locker locker(throttlingSemaphore_); |
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
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1185 |
3683
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1186 GetImageHandler handler(mode); |
4406
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1187 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
3683
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1188 } |
1906
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1189 |
1826
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1190 |
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1191 static void GetRenderedFrame(RestApiGetCall& call) |
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1192 { |
3926
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1193 Semaphore::Locker locker(throttlingSemaphore_); |
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1194 |
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1195 RenderedFrameHandler handler; |
4406
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1196 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
751
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1197 } |
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1198 |
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1199 |
4834
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1200 static void DocumentSharedNumpy(RestApiGetCall& call) |
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1201 { |
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1202 call.GetDocumentation() |
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1203 .SetUriArgument("id", "Orthanc identifier of the DICOM resource of interest") |
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1204 .SetHttpGetArgument("compress", RestApiCallDocumentation::Type_Boolean, "Compress the file as `.npz`", false) |
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1205 .SetHttpGetArgument("rescale", RestApiCallDocumentation::Type_Boolean, |
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1206 "On grayscale images, apply the rescaling and return floating-point values", false) |
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1207 .AddAnswerType(MimeType_PlainText, "Numpy file: https://numpy.org/devdocs/reference/generated/numpy.lib.format.html"); |
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1208 } |
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1209 |
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1210 |
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|
1211 namespace |
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1212 { |
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1213 class NumpyVisitor : public boost::noncopyable |
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1214 { |
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|
1215 private: |
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|
1216 bool rescale_; |
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1217 unsigned int depth_; |
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1218 unsigned int currentDepth_; |
4858 | 1219 unsigned int width_; |
4834
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1220 unsigned int height_; |
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|
1221 PixelFormat format_; |
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1222 ChunkedBuffer buffer_; |
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1223 |
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1224 public: |
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1225 NumpyVisitor(unsigned int depth /* can be zero if 2D frame */, |
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1226 bool rescale) : |
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1227 rescale_(rescale), |
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1228 depth_(depth), |
4858 | 1229 currentDepth_(0), |
1230 width_(0), // dummy initialization | |
1231 height_(0), // dummy initialization | |
1232 format_(PixelFormat_Grayscale8) // dummy initialization | |
4834
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1233 { |
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1234 } |
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1235 |
4858 | 1236 void WriteFrame(const ParsedDicomFile& dicom, |
4834
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1237 unsigned int frame) |
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1238 { |
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1239 std::unique_ptr<ImageAccessor> decoded(dicom.DecodeFrame(frame)); |
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1240 |
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1241 if (decoded.get() == NULL) |
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|
1242 { |
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1243 throw OrthancException(ErrorCode_NotImplemented, "Cannot decode DICOM instance"); |
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|
1244 } |
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|
1245 |
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|
1246 if (currentDepth_ == 0) |
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|
1247 { |
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|
1248 width_ = decoded->GetWidth(); |
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|
1249 height_ = decoded->GetHeight(); |
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|
1250 format_ = decoded->GetFormat(); |
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|
1251 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1252 else if (width_ != decoded->GetWidth() || |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
1253 height_ != decoded->GetHeight()) |
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diff
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|
1254 { |
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|
1255 throw OrthancException(ErrorCode_IncompatibleImageSize, "The size of the frames varies across the instance(s)"); |
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|
1256 } |
bec432ee1094
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|
1257 else if (format_ != decoded->GetFormat()) |
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|
1258 { |
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|
1259 throw OrthancException(ErrorCode_IncompatibleImageFormat, "The pixel format of the frames varies across the instance(s)"); |
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|
1260 } |
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|
1261 |
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|
1262 if (rescale_ && |
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|
1263 decoded->GetFormat() != PixelFormat_RGB24) |
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|
1264 { |
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|
1265 if (currentDepth_ == 0) |
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|
1266 { |
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|
1267 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, PixelFormat_Float32); |
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1268 } |
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|
1269 |
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changeset
|
1270 double rescaleIntercept, rescaleSlope; |
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|
1271 dicom.GetRescale(rescaleIntercept, rescaleSlope, frame); |
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|
1272 |
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|
1273 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
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|
1274 ImageProcessing::Convert(converted, *decoded); |
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|
1275 ImageProcessing::ShiftScale2(converted, static_cast<float>(rescaleIntercept), static_cast<float>(rescaleSlope), false); |
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1276 |
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1277 NumpyWriter::WritePixels(buffer_, converted); |
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1278 } |
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1279 else |
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|
1280 { |
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|
1281 if (currentDepth_ == 0) |
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1282 { |
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|
1283 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, format_); |
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1284 } |
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|
1285 |
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|
1286 NumpyWriter::WritePixels(buffer_, *decoded); |
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1287 } |
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|
1288 |
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|
1289 currentDepth_ ++; |
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1290 } |
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|
1291 |
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|
1292 void Answer(RestApiOutput& output, |
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1293 bool compress) |
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|
1294 { |
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|
1295 if ((depth_ == 0 && currentDepth_ != 1) || |
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1296 (depth_ != 0 && currentDepth_ != depth_)) |
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1297 { |
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|
1298 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
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1299 } |
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1300 else |
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1301 { |
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|
1302 std::string answer; |
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|
1303 NumpyWriter::Finalize(answer, buffer_, compress); |
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|
1304 output.AnswerBuffer(answer, MimeType_Binary); |
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1305 } |
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1306 } |
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1307 }; |
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1308 } |
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1309 |
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1310 |
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1311 static void GetNumpyFrame(RestApiGetCall& call) |
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1312 { |
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1313 if (call.IsDocumentation()) |
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1314 { |
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1315 DocumentSharedNumpy(call); |
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1316 call.GetDocumentation() |
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1317 .SetTag("Instances") |
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1318 .SetSummary("Decode frame for numpy") |
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1319 .SetDescription("Decode one frame of interest from the given DICOM instance, for use with numpy in Python. " |
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1320 "The numpy array has 3 dimensions: (height, width, color channel).") |
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1321 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
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1322 } |
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1323 else |
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1324 { |
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1325 const std::string instanceId = call.GetUriComponent("id", ""); |
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1326 const bool compress = call.GetBooleanArgument("compress", false); |
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1327 const bool rescale = call.GetBooleanArgument("rescale", true); |
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1328 |
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1329 uint32_t frame; |
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1330 if (!SerializationToolbox::ParseUnsignedInteger32(frame, call.GetUriComponent("frame", "0"))) |
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1331 { |
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1332 throw OrthancException(ErrorCode_ParameterOutOfRange, "Expected an unsigned integer for the \"frame\" argument"); |
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1333 } |
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1334 |
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1335 NumpyVisitor visitor(0 /* no depth, 2D frame */, rescale); |
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1336 |
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1337 { |
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1338 Semaphore::Locker throttling(throttlingSemaphore_); |
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1339 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
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1340 |
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1341 visitor.WriteFrame(locker.GetDicom(), frame); |
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1342 } |
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1343 |
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1344 visitor.Answer(call.GetOutput(), compress); |
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1345 } |
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1346 } |
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1347 |
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1348 |
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1349 static void GetNumpyInstance(RestApiGetCall& call) |
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1350 { |
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1351 if (call.IsDocumentation()) |
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1352 { |
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1353 DocumentSharedNumpy(call); |
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1354 call.GetDocumentation() |
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1355 .SetTag("Instances") |
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1356 .SetSummary("Decode instance for numpy") |
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1357 .SetDescription("Decode the given DICOM instance, for use with numpy in Python. " |
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1358 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
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1359 } |
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1360 else |
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1361 { |
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1362 const std::string instanceId = call.GetUriComponent("id", ""); |
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1363 const bool compress = call.GetBooleanArgument("compress", false); |
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1364 const bool rescale = call.GetBooleanArgument("rescale", true); |
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1365 |
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1366 { |
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1367 Semaphore::Locker throttling(throttlingSemaphore_); |
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1368 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
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1369 |
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1370 const unsigned int depth = locker.GetDicom().GetFramesCount(); |
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1371 if (depth == 0) |
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1372 { |
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1373 throw OrthancException(ErrorCode_BadFileFormat, "Empty DICOM instance"); |
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1374 } |
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1375 |
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1376 NumpyVisitor visitor(depth, rescale); |
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1377 |
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1378 for (unsigned int frame = 0; frame < depth; frame++) |
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1379 { |
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1380 visitor.WriteFrame(locker.GetDicom(), frame); |
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1381 } |
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1382 |
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1383 visitor.Answer(call.GetOutput(), compress); |
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1384 } |
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1385 } |
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1386 } |
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1387 |
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|
1388 |
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1389 static void GetNumpySeries(RestApiGetCall& call) |
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1390 { |
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1391 if (call.IsDocumentation()) |
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1392 { |
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1393 DocumentSharedNumpy(call); |
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1394 call.GetDocumentation() |
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1395 .SetTag("Series") |
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1396 .SetSummary("Decode series for numpy") |
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1397 .SetDescription("Decode the given DICOM series, for use with numpy in Python. " |
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1398 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
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1399 } |
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1400 else |
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1401 { |
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1402 const std::string seriesId = call.GetUriComponent("id", ""); |
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1403 const bool compress = call.GetBooleanArgument("compress", false); |
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1404 const bool rescale = call.GetBooleanArgument("rescale", true); |
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1405 |
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1406 Semaphore::Locker throttling(throttlingSemaphore_); |
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1407 |
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1408 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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1409 SliceOrdering ordering(index, seriesId); |
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1410 |
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1411 unsigned int depth = 0; |
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1412 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
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1413 { |
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1414 depth += ordering.GetFramesCount(i); |
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1415 } |
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1416 |
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1417 ServerContext& context = OrthancRestApi::GetContext(call); |
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1418 |
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|
1419 NumpyVisitor visitor(depth, rescale); |
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1420 |
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1421 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
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1422 { |
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|
1423 const std::string& instanceId = ordering.GetInstanceId(i); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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4831
diff
changeset
|
1424 unsigned int framesCount = ordering.GetFramesCount(i); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1425 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1426 { |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1427 ServerContext::DicomCacheLocker locker(context, instanceId); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1428 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1429 for (unsigned int frame = 0; frame < framesCount; frame++) |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1430 { |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1431 visitor.WriteFrame(locker.GetDicom(), frame); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1432 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1433 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1434 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1435 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1436 visitor.Answer(call.GetOutput(), compress); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1437 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1438 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1439 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1440 |
974 | 1441 static void GetMatlabImage(RestApiGetCall& call) |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1442 { |
4414 | 1443 if (call.IsDocumentation()) |
1444 { | |
1445 std::string description; | |
1446 | |
1447 if (call.HasUriComponent("frame")) | |
1448 { | |
1449 description = "Decode one frame of interest from the given DICOM instance"; | |
1450 call.GetDocumentation() | |
1451 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
1452 } | |
1453 else | |
1454 { | |
1455 description = "Decode the first frame of the given DICOM instance."; | |
1456 } | |
1457 | |
1458 call.GetDocumentation() | |
1459 .SetTag("Instances") | |
1460 .SetSummary("Decode frame for Matlab") | |
1461 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
1462 "https://book.orthanc-server.com/faq/matlab.html") | |
1463 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
1464 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
1465 return; | |
1466 } | |
1467 | |
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1468 Semaphore::Locker locker(throttlingSemaphore_); |
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
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diff
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|
1469 |
874
87791ebc1f50
download matlab images
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diff
changeset
|
1470 ServerContext& context = OrthancRestApi::GetContext(call); |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1471 |
87791ebc1f50
download matlab images
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diff
changeset
|
1472 std::string frameId = call.GetUriComponent("frame", "0"); |
87791ebc1f50
download matlab images
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diff
changeset
|
1473 |
87791ebc1f50
download matlab images
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changeset
|
1474 unsigned int frame; |
87791ebc1f50
download matlab images
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diff
changeset
|
1475 try |
87791ebc1f50
download matlab images
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diff
changeset
|
1476 { |
87791ebc1f50
download matlab images
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diff
changeset
|
1477 frame = boost::lexical_cast<unsigned int>(frameId); |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1478 } |
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1479 catch (boost::bad_lexical_cast&) |
874
87791ebc1f50
download matlab images
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831
diff
changeset
|
1480 { |
87791ebc1f50
download matlab images
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diff
changeset
|
1481 return; |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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831
diff
changeset
|
1482 } |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1483 |
87791ebc1f50
download matlab images
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diff
changeset
|
1484 std::string publicId = call.GetUriComponent("id", ""); |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
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|
1485 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
874
87791ebc1f50
download matlab images
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diff
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|
1486 |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1487 if (decoded.get() == NULL) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1488 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
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|
1489 throw OrthancException(ErrorCode_NotImplemented, |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1490 "Cannot decode DICOM instance with ID: " + publicId); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1491 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1492 else |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1493 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1494 std::string result; |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1495 decoded->ToMatlabString(result); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1496 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1497 } |
874
87791ebc1f50
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diff
changeset
|
1498 } |
87791ebc1f50
download matlab images
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diff
changeset
|
1499 |
87791ebc1f50
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diff
changeset
|
1500 |
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
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2382
diff
changeset
|
1501 template <bool GzipCompression> |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1502 static void GetRawFrame(RestApiGetCall& call) |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1503 { |
4408 | 1504 if (call.IsDocumentation()) |
1505 { | |
1506 call.GetDocumentation() | |
1507 .SetTag("Instances") | |
1508 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
1509 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
1510 "bypassing image decoding. This is notably useful to access the source files " | |
1511 "in compressed transfer syntaxes." + | |
1512 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
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4422
diff
changeset
|
1513 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
4408 | 1514 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
1515 | |
1516 if (GzipCompression) | |
1517 { | |
1518 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
1519 } | |
1520 else | |
1521 { | |
1522 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
1523 } | |
1524 return; | |
1525 } | |
1526 | |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1527 std::string frameId = call.GetUriComponent("frame", "0"); |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1528 |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1529 unsigned int frame; |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1530 try |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1531 { |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1532 frame = boost::lexical_cast<unsigned int>(frameId); |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1533 } |
2836
7133ad478eea
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1534 catch (boost::bad_lexical_cast&) |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1535 { |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1536 return; |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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|
1537 } |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1538 |
6c73df12ca51
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1539 std::string publicId = call.GetUriComponent("id", ""); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
1540 std::string raw; |
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
1541 MimeType mime; |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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1906
diff
changeset
|
1542 |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1543 { |
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1544 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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1906
diff
changeset
|
1545 locker.GetDicom().GetRawFrame(raw, mime, frame); |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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|
1546 } |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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|
1547 |
2408
26a0cc24d48d
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parents:
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diff
changeset
|
1548 if (GzipCompression) |
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1549 { |
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diff
changeset
|
1550 GzipCompressor gzip; |
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1551 std::string compressed; |
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1552 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
1553 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1554 } |
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1555 else |
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1556 { |
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1557 call.GetOutput().AnswerBuffer(raw, mime); |
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
1558 } |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1559 } |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1560 |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1561 |
974 | 1562 static void GetResourceStatistics(RestApiGetCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1563 { |
4418 | 1564 if (call.IsDocumentation()) |
1565 { | |
1566 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1567 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1568 call.GetDocumentation() | |
1569 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1570 .SetSummary("Get " + r + " statistics") | |
1571 .SetDescription("Get statistics about the given " + r) | |
1572 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1573 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
1574 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
1575 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
1576 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
1577 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
1578 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
1579 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
1580 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
1581 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
1582 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
1583 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
1584 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
1585 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
1586 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
1587 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
1588 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
1589 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
1590 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
1591 | |
1592 switch (t) | |
1593 { | |
1594 // Do NOT add "break" below this point! | |
1595 case ResourceType_Patient: | |
1596 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
1597 "Number of child studies within this " + r); | |
1598 | |
1599 case ResourceType_Study: | |
1600 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
1601 "Number of child series within this " + r); | |
1602 | |
1603 case ResourceType_Series: | |
1604 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
1605 "Number of child instances within this " + r); | |
1606 | |
1607 case ResourceType_Instance: | |
1608 default: | |
1609 break; | |
1610 } | |
1611 | |
1612 return; | |
1613 } | |
1614 | |
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1615 static const uint64_t MEGA_BYTES = 1024 * 1024; |
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1616 |
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1617 std::string publicId = call.GetUriComponent("id", ""); |
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1618 |
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1619 ResourceType type; |
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1620 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
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1621 unsigned int countStudies, countSeries, countInstances; |
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1622 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
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1623 type, diskSize, uncompressedSize, countStudies, countSeries, |
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1624 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
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1625 |
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1626 Json::Value result = Json::objectValue; |
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1627 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1628 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1629 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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1630 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
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1631 |
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1632 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
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1633 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1634 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
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1635 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
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1636 |
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1637 switch (type) |
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1638 { |
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1639 // Do NOT add "break" below this point! |
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1640 case ResourceType_Patient: |
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1641 result["CountStudies"] = countStudies; |
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1642 |
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1643 case ResourceType_Study: |
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1644 result["CountSeries"] = countSeries; |
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1645 |
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1646 case ResourceType_Series: |
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1647 result["CountInstances"] = countInstances; |
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1648 |
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1649 case ResourceType_Instance: |
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1650 default: |
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1651 break; |
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1652 } |
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1653 |
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1654 call.GetOutput().AnswerJson(result); |
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1655 } |
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1656 |
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1657 |
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1658 |
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1659 // Handling of metadata ----------------------------------------------------- |
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1660 |
4205 | 1661 static void CheckValidResourceType(const RestApiCall& call) |
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1662 { |
4460
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|
1663 assert(!call.GetFullUri().empty()); |
4409 | 1664 const std::string resourceType = call.GetFullUri() [0]; |
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1665 StringToResourceType(resourceType.c_str()); |
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1666 } |
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1667 |
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1668 |
974 | 1669 static void ListMetadata(RestApiGetCall& call) |
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1670 { |
4414 | 1671 if (call.IsDocumentation()) |
1672 { | |
1673 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1674 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1675 call.GetDocumentation() | |
1676 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1677 .SetSummary("List metadata") | |
1678 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
1679 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1680 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
1681 "If present, also retrieve the value of the individual metadata", false) | |
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1682 .SetHttpGetArgument("numeric", RestApiCallDocumentation::Type_String, |
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1683 "If present, use the numeric identifier of the metadata instead of its symbolic name", false) |
4414 | 1684 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " |
1685 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
1686 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
1687 return; | |
1688 } | |
1689 | |
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|
1690 assert(!call.GetFullUri().empty()); |
4554 | 1691 const std::string publicId = call.GetUriComponent("id", ""); |
1692 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
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1693 |
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1694 typedef std::map<MetadataType, std::string> Metadata; |
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1695 |
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1696 Metadata metadata; |
4554 | 1697 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
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1698 |
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1699 Json::Value result; |
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1700 |
5274
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1701 bool isNumeric = call.HasArgument("numeric"); |
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1702 |
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1703 if (call.HasArgument("expand")) |
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1704 { |
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1705 result = Json::objectValue; |
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1706 |
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1707 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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1708 { |
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1709 std::string key; |
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1710 if (isNumeric) |
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1711 { |
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1712 key = boost::lexical_cast<std::string>(it->first); |
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1713 } |
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1714 else |
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1715 { |
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1716 key = EnumerationToString(it->first); |
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1717 } |
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1718 |
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1719 result[key] = it->second; |
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1720 } |
2726
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1721 } |
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1722 else |
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1723 { |
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1724 result = Json::arrayValue; |
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1725 |
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1726 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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1727 { |
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1728 if (isNumeric) |
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1729 { |
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1730 result.append(it->first); |
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1731 } |
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1732 else |
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1733 { |
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1734 result.append(EnumerationToString(it->first)); |
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1735 } |
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1736 } |
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1737 } |
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1738 |
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1739 call.GetOutput().AnswerJson(result); |
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1740 } |
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1741 |
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1742 |
4657 | 1743 static void SetStringContentETag(const RestApiOutput& output, |
1744 int64_t revision, | |
1745 const std::string& value) | |
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1746 { |
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1747 std::string md5; |
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1748 Toolbox::ComputeMD5(md5, value); |
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1749 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1750 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1751 } |
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1752 |
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1753 |
4657 | 1754 static void SetBufferContentETag(const RestApiOutput& output, |
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1755 int64_t revision, |
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1756 const void* data, |
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1757 size_t size) |
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1758 { |
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1759 std::string md5; |
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1760 Toolbox::ComputeMD5(md5, data, size); |
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1761 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1762 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1763 } |
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1764 |
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1765 |
4657 | 1766 static void SetAttachmentETag(const RestApiOutput& output, |
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1767 int64_t revision, |
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1768 const FileInfo& info) |
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1769 { |
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1770 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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1771 info.GetUncompressedMD5() + "\""); |
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1772 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1773 } |
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1774 |
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1775 |
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1776 static std::string GetMD5(const std::string& value) |
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1777 { |
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1778 std::string md5; |
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1779 Toolbox::ComputeMD5(md5, value); |
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1780 return md5; |
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1781 } |
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1782 |
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1783 |
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1784 static bool GetRevisionHeader(int64_t& revision /* out */, |
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1785 std::string& md5 /* out */, |
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1786 const RestApiCall& call, |
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1787 const std::string& header) |
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1788 { |
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1789 std::string lower; |
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1790 Toolbox::ToLowerCase(lower, header); |
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1791 |
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1792 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1793 if (found == call.GetHttpHeaders().end()) |
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1794 { |
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1795 return false; |
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1796 } |
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1797 else |
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1798 { |
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1799 std::string value = Toolbox::StripSpaces(found->second); |
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1800 Toolbox::RemoveSurroundingQuotes(value); |
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1801 |
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1802 try |
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1803 { |
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1804 size_t comma = value.find('-'); |
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1805 if (comma != std::string::npos) |
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1806 { |
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1807 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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1808 md5 = value.substr(comma + 1); |
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1809 return true; |
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1810 } |
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1811 } |
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1812 catch (boost::bad_lexical_cast&) |
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1813 { |
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1814 } |
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1815 |
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1816 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1817 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
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1818 } |
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1819 } |
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1820 |
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1821 |
974 | 1822 static void GetMetadata(RestApiGetCall& call) |
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1823 { |
4414 | 1824 if (call.IsDocumentation()) |
1825 { | |
1826 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1827 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1828 call.GetDocumentation() | |
1829 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1830 .SetSummary("Get metadata") | |
1831 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
1832 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1833 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1834 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1835 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1836 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
4414 | 1837 return; |
1838 } | |
1839 | |
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1840 assert(!call.GetFullUri().empty()); |
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1841 const std::string publicId = call.GetUriComponent("id", ""); |
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1842 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1843 |
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1844 std::string name = call.GetUriComponent("name", ""); |
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1845 MetadataType metadata = StringToMetadata(name); |
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1846 |
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1847 std::string value; |
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1848 int64_t revision; |
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1849 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1850 { |
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1851 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
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1852 |
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1853 int64_t userRevision; |
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1854 std::string userMD5; |
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1855 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1856 userRevision == revision && |
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1857 userMD5 == GetMD5(value)) |
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1858 { |
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1859 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1860 } |
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1861 else |
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1862 { |
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1863 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1864 } |
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1865 } |
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1866 } |
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1867 |
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1868 |
974 | 1869 static void DeleteMetadata(RestApiDeleteCall& call) |
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1870 { |
4414 | 1871 if (call.IsDocumentation()) |
1872 { | |
1873 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1874 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1875 call.GetDocumentation() | |
1876 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1877 .SetSummary("Delete metadata") | |
1878 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
1879 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
1880 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
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1881 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
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1882 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
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1883 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
4414 | 1884 return; |
1885 } | |
1886 | |
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1887 CheckValidResourceType(call); |
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1888 const std::string publicId = call.GetUriComponent("id", ""); |
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1889 |
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1890 std::string name = call.GetUriComponent("name", ""); |
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1891 MetadataType metadata = StringToMetadata(name); |
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1892 |
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1893 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
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1894 { |
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1895 bool found; |
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1896 int64_t revision; |
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1897 std::string md5; |
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1898 if (GetRevisionHeader(revision, md5, call, "if-match")) |
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1899 { |
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1900 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
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1901 } |
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1902 else |
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1903 { |
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1904 OrthancConfiguration::ReaderLock lock; |
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1905 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1906 { |
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1907 throw OrthancException(ErrorCode_Revision, |
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1908 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
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1909 } |
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1910 else |
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1911 { |
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1912 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
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1913 } |
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1914 } |
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1915 |
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1916 if (found) |
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1917 { |
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1918 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1919 } |
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1920 else |
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1921 { |
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1922 throw OrthancException(ErrorCode_UnknownResource); |
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1923 } |
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1924 } |
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1925 else |
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1926 { |
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1927 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1928 } |
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1929 } |
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1930 |
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1931 |
974 | 1932 static void SetMetadata(RestApiPutCall& call) |
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1933 { |
4414 | 1934 if (call.IsDocumentation()) |
1935 { | |
1936 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1937 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1938 call.GetDocumentation() | |
1939 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1940 .SetSummary("Set metadata") | |
1941 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
1942 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
1943 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1944 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1945 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
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1946 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
4414 | 1947 return; |
1948 } | |
1949 | |
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1950 CheckValidResourceType(call); |
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1951 |
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1952 std::string publicId = call.GetUriComponent("id", ""); |
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1953 std::string name = call.GetUriComponent("name", ""); |
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1954 MetadataType metadata = StringToMetadata(name); |
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1955 |
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1956 std::string value; |
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1957 call.BodyToString(value); |
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1958 |
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1959 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
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1960 { |
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1961 int64_t oldRevision; |
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1962 std::string oldMD5; |
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1963 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
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1964 |
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1965 if (!hasOldRevision) |
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1966 { |
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1967 OrthancConfiguration::ReaderLock lock; |
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1968 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1969 { |
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1970 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
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1971 // the actual value of "oldRevision" if the metadata is |
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1972 // inexistent as expected |
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1973 hasOldRevision = true; |
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1974 oldRevision = -1; // dummy value |
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1975 oldMD5.clear(); // dummy value |
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1976 } |
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1977 } |
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1978 |
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1979 int64_t newRevision; |
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1980 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
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1981 hasOldRevision, oldRevision, oldMD5); |
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1982 |
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1983 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
2908
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1984 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1985 } |
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1986 else |
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1987 { |
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1988 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1989 } |
751
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1990 } |
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|
1991 |
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|
1992 |
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|
1993 |
5221
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|
1994 // Handling of labels ------------------------------------------------------- |
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|
1995 |
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1996 static void ListLabels(RestApiGetCall& call) |
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|
1997 { |
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|
1998 if (call.IsDocumentation()) |
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|
1999 { |
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2000 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
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|
2001 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
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|
2002 call.GetDocumentation() |
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2003 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
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2004 .SetSummary("List labels (new in Orthanc 1.12.0)") |
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|
2005 .SetDescription("Get the labels that are associated with the given " + r) |
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2006 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
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|
2007 .AddAnswerType(MimeType_Json, "JSON array containing the names of the labels") |
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Sebastien Jodogne <s.jodogne@gmail.com>
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2008 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/labels", true); |
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|
2009 return; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2010 } |
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parents:
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diff
changeset
|
2011 |
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parents:
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|
2012 assert(!call.GetFullUri().empty()); |
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|
2013 const std::string publicId = call.GetUriComponent("id", ""); |
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parents:
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diff
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|
2014 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2015 |
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parents:
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diff
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|
2016 std::set<std::string> labels; |
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parents:
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diff
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|
2017 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2018 |
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parents:
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diff
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|
2019 Json::Value result = Json::arrayValue; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2020 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2021 for (std::set<std::string>::const_iterator it = labels.begin(); it != labels.end(); ++it) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2022 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2023 result.append(*it); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2024 } |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2025 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2026 call.GetOutput().AnswerJson(result); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2027 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2028 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2029 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2030 static void GetLabel(RestApiGetCall& call) |
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2031 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2032 if (call.IsDocumentation()) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2033 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2034 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2035 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2036 call.GetDocumentation() |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2037 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2038 .SetSummary("Test label") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2039 .SetDescription("Test whether the " + r + " is associated with the given label") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2040 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2041 .SetUriArgument("label", "The label of interest") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2042 .AddAnswerType(MimeType_PlainText, "Empty string is returned in the case of presence, error 404 in the case of absence"); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2043 return; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2044 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2045 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2046 CheckValidResourceType(call); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2047 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2048 assert(!call.GetFullUri().empty()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2049 const std::string publicId = call.GetUriComponent("id", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2050 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2051 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2052 std::string label = call.GetUriComponent("label", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2053 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2054 std::set<std::string> labels; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2055 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2056 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2057 if (labels.find(label) != labels.end()) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2058 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2059 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2060 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2061 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2062 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2063 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2064 static void AddLabel(RestApiPutCall& call) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2065 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2066 if (call.IsDocumentation()) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2067 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2068 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2069 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2070 call.GetDocumentation() |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2071 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2072 .SetSummary("Add label") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2073 .SetDescription("Associate a label with a " + r) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2074 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2075 .SetUriArgument("label", "The label to be added"); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2076 return; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2077 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2078 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2079 CheckValidResourceType(call); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2080 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2081 std::string publicId = call.GetUriComponent("id", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2082 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2083 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2084 std::string label = call.GetUriComponent("label", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2085 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Add); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2086 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2087 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2088 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2089 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2090 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2091 static void RemoveLabel(RestApiDeleteCall& call) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2092 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2093 if (call.IsDocumentation()) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2094 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2095 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2096 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2097 call.GetDocumentation() |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2098 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2099 .SetSummary("Remove label") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2100 .SetDescription("Remove a label associated with a " + r) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2101 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2102 .SetUriArgument("label", "The label to be removed"); |
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2103 return; |
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2104 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2105 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2106 CheckValidResourceType(call); |
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2107 |
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2108 std::string publicId = call.GetUriComponent("id", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2109 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2110 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2111 std::string label = call.GetUriComponent("label", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2112 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Remove); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2113 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2114 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2115 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2116 |
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diff
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|
2117 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2118 // Handling of attached files ----------------------------------------------- |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2119 |
974 | 2120 static void ListAttachments(RestApiGetCall& call) |
751
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refactoring of OrthancRestApi
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parents:
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|
2121 { |
4409 | 2122 if (call.IsDocumentation()) |
2123 { | |
2124 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2125 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2126 call.GetDocumentation() | |
2127 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2128 .SetSummary("List attachments") | |
2129 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
2130 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
4853
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2131 .SetHttpGetArgument("full", RestApiCallDocumentation::Type_String, |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2132 "If present, retrieve the attachments list and their numerical ids", false) |
4409 | 2133 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") |
2134 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
2135 return; | |
2136 } | |
2137 | |
2138 const std::string resourceType = call.GetFullUri() [0]; | |
2139 const std::string publicId = call.GetUriComponent("id", ""); | |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4513
diff
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|
2140 std::set<FileContentType> attachments; |
751
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diff
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|
2141 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2142 |
4853
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2143 Json::Value result; |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2144 |
b3d0a3a4d890
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parents:
4836
diff
changeset
|
2145 if (call.HasArgument("full")) |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2146 { |
4853
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2147 result = Json::objectValue; |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2148 |
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Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2149 for (std::set<FileContentType>::const_iterator |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2150 it = attachments.begin(); it != attachments.end(); ++it) |
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2151 { |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2152 std::string key = EnumerationToString(*it); |
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2153 result[key] = static_cast<uint16_t>(*it); |
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2154 } |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2155 } |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2156 else |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2157 { |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2158 result = Json::arrayValue; |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2159 |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2160 for (std::set<FileContentType>::const_iterator |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2161 it = attachments.begin(); it != attachments.end(); ++it) |
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2162 { |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2163 result.append(EnumerationToString(*it)); |
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2164 } |
751
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parents:
diff
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|
2165 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2166 |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2167 call.GetOutput().AnswerJson(result); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2168 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2169 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2170 |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2171 static void AddAttachmentDocumentation(RestApiGetCall& call, |
f7d5372b59b3
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4623
diff
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|
2172 const std::string& resourceType) |
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4623
diff
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|
2173 { |
f7d5372b59b3
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4623
diff
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|
2174 call.GetDocumentation() |
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diff
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|
2175 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
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handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2176 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2177 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2178 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
f7d5372b59b3
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parents:
4623
diff
changeset
|
2179 } |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2180 |
f7d5372b59b3
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4623
diff
changeset
|
2181 |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2182 static bool GetAttachmentInfo(FileInfo& info, |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2183 RestApiGetCall& call) |
751
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changeset
|
2184 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2185 CheckValidResourceType(call); |
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diff
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|
2186 |
4627
f7d5372b59b3
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4623
diff
changeset
|
2187 const std::string publicId = call.GetUriComponent("id", ""); |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2188 const std::string name = call.GetUriComponent("name", ""); |
751
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refactoring of OrthancRestApi
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diff
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|
2189 FileContentType contentType = StringToContentType(name); |
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refactoring of OrthancRestApi
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|
2190 |
4627
f7d5372b59b3
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4623
diff
changeset
|
2191 int64_t revision; |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2192 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
f7d5372b59b3
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parents:
4623
diff
changeset
|
2193 { |
4640
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2194 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
4627
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4623
diff
changeset
|
2195 |
f7d5372b59b3
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parents:
4623
diff
changeset
|
2196 int64_t userRevision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2197 std::string userMD5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2198 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2199 revision == userRevision && |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2200 info.GetUncompressedMD5() == userMD5) |
4627
f7d5372b59b3
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4623
diff
changeset
|
2201 { |
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4623
diff
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|
2202 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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|
2203 return false; |
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|
2204 } |
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|
2205 else |
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diff
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|
2206 { |
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diff
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|
2207 return true; |
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4623
diff
changeset
|
2208 } |
f7d5372b59b3
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4623
diff
changeset
|
2209 } |
f7d5372b59b3
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4623
diff
changeset
|
2210 else |
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4623
diff
changeset
|
2211 { |
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|
2212 throw OrthancException(ErrorCode_UnknownResource); |
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|
2213 } |
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|
2214 } |
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|
2215 |
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|
2216 |
974 | 2217 static void GetAttachmentOperations(RestApiGetCall& call) |
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2218 { |
4409 | 2219 if (call.IsDocumentation()) |
2220 { | |
2221 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2222 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
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|
2223 AddAttachmentDocumentation(call, r); |
4409 | 2224 call.GetDocumentation() |
2225 .SetTag("Other") | |
4414 | 2226 .SetSummary("List operations on attachments") |
2227 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
4409 | 2228 .AddAnswerType(MimeType_Json, "List of the available operations") |
2229 .SetHttpGetSample("https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2/attachments/dicom", true); | |
2230 return; | |
2231 } | |
2232 | |
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|
2233 FileInfo info; |
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2234 if (GetAttachmentInfo(info, call)) |
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|
2235 { |
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|
2236 Json::Value operations = Json::arrayValue; |
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|
2237 |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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|
2238 operations.append("compress"); |
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|
2239 operations.append("compressed-data"); |
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changeset
|
2240 |
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|
2241 if (info.GetCompressedMD5() != "") |
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changeset
|
2242 { |
5197fd35333c
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diff
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|
2243 operations.append("compressed-md5"); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2244 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2245 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2246 operations.append("compressed-size"); |
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parents:
diff
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|
2247 operations.append("data"); |
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2248 operations.append("info"); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
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|
2249 operations.append("is-compressed"); |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2250 |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2251 if (info.GetUncompressedMD5() != "") |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2252 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2253 operations.append("md5"); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2254 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2255 |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2256 operations.append("size"); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
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|
2257 operations.append("uncompress"); |
751
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2258 |
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diff
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|
2259 if (info.GetCompressedMD5() != "" && |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2260 info.GetUncompressedMD5() != "") |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2261 { |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2262 operations.append("verify-md5"); |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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2263 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2264 |
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
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|
2265 operations.append("uuid"); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
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2266 |
751
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2267 call.GetOutput().AnswerJson(operations); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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2268 } |
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diff
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|
2269 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2270 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2271 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2272 template <int uncompress> |
974 | 2273 static void GetAttachmentData(RestApiGetCall& call) |
751
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|
2274 { |
4409 | 2275 if (call.IsDocumentation()) |
2276 { | |
2277 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2278 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2279 call.GetDocumentation() | |
2280 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2281 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
2282 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
4418 | 2283 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
4409 | 2284 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4414 | 2285 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
4627
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4623
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2286 .AddAnswerType(MimeType_Binary, "The attachment") |
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2287 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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2288 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
4409 | 2289 return; |
2290 } | |
2291 | |
751
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2292 ServerContext& context = OrthancRestApi::GetContext(call); |
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|
2293 |
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2294 CheckValidResourceType(call); |
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2295 |
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2296 std::string publicId = call.GetUriComponent("id", ""); |
1146
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diff
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|
2297 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
751
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|
2298 |
4640
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
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4627
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2299 FileInfo info; |
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2300 if (GetAttachmentInfo(info, call)) |
1146
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diff
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|
2301 { |
4640
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Sebastien Jodogne <s.jodogne@gmail.com>
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2302 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
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2303 |
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2304 if (uncompress) |
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2305 { |
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2306 context.AnswerAttachment(call.GetOutput(), publicId, type); |
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2307 } |
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2308 else |
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2309 { |
4640
66109d24d26e
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2310 // Return the raw data (possibly compressed), as stored on the filesystem |
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2311 std::string content; |
66109d24d26e
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|
2312 int64_t revision; |
5048
22966345eaba
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Alain Mazy <am@osimis.io>
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5003
diff
changeset
|
2313 context.ReadAttachment(content, revision, publicId, type, false, true /* skipCache when you absolutely need the compressed data */); |
4640
66109d24d26e
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2314 |
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2315 int64_t userRevision; |
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2316 std::string userMD5; |
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|
2317 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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2318 revision == userRevision && |
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|
2319 info.GetUncompressedMD5() == userMD5) |
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2320 { |
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|
2321 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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2322 } |
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2323 else |
66109d24d26e
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|
2324 { |
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2325 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
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2326 } |
4627
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2327 } |
1146
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2328 } |
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2329 } |
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|
2330 |
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2331 |
974 | 2332 static void GetAttachmentSize(RestApiGetCall& call) |
751
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2333 { |
4409 | 2334 if (call.IsDocumentation()) |
2335 { | |
2336 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2337 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
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4623
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2338 AddAttachmentDocumentation(call, r); |
4409 | 2339 call.GetDocumentation() |
2340 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2341 .SetSummary("Get size of attachment") | |
2342 .SetDescription("Get the size of one attachment associated with the given " + r) | |
2343 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
2344 return; | |
2345 } | |
2346 | |
751
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2347 FileInfo info; |
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2348 if (GetAttachmentInfo(info, call)) |
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2349 { |
2908
9d277f8ad698
new enumeration: MimeType
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2905
diff
changeset
|
2350 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
751
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2351 } |
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2352 } |
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2353 |
4883
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2354 static void GetAttachmentInfo(RestApiGetCall& call) |
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2355 { |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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2356 if (call.IsDocumentation()) |
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2357 { |
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2358 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
504624b0a062
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2359 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
504624b0a062
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|
2360 AddAttachmentDocumentation(call, r); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2361 call.GetDocumentation() |
504624b0a062
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|
2362 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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2363 .SetSummary("Get info about the attachment") |
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2364 .SetDescription("Get all the information about the attachment associated with the given " + r) |
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|
2365 .AddAnswerType(MimeType_Json, "JSON object containing the information about the attachment") |
5003 | 2366 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/attachments/dicom/info", true); |
4883
504624b0a062
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|
2367 return; |
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|
2368 } |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2369 |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2370 FileInfo info; |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2371 if (GetAttachmentInfo(info, call)) |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2372 { |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2373 Json::Value result = Json::objectValue; |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2374 result["Uuid"] = info.GetUuid(); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2375 result["ContentType"] = info.GetContentType(); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2376 result["UncompressedSize"] = Json::Value::UInt64(info.GetUncompressedSize()); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2377 result["CompressedSize"] = Json::Value::UInt64(info.GetCompressedSize()); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2378 result["UncompressedMD5"] = info.GetUncompressedMD5(); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2379 result["CompressedMD5"] = info.GetCompressedMD5(); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2380 |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2381 call.GetOutput().AnswerJson(result); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2382 } |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2383 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2384 |
974 | 2385 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2386 { |
4409 | 2387 if (call.IsDocumentation()) |
2388 { | |
2389 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2390 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2391 AddAttachmentDocumentation(call, r); |
4409 | 2392 call.GetDocumentation() |
2393 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
4410 | 2394 .SetSummary("Get size of attachment on disk") |
4409 | 2395 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
4413 | 2396 "This is different from `.../size` iff `EnableStorage` is `true`.") |
4410 | 2397 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
4409 | 2398 return; |
2399 } | |
2400 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2401 FileInfo info; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2402 if (GetAttachmentInfo(info, call)) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2403 { |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2404 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2405 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2406 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2407 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2408 |
974 | 2409 static void GetAttachmentMD5(RestApiGetCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2410 { |
4410 | 2411 if (call.IsDocumentation()) |
2412 { | |
2413 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2414 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2415 AddAttachmentDocumentation(call, r); |
4410 | 2416 call.GetDocumentation() |
2417 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2418 .SetSummary("Get MD5 of attachment") | |
2419 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
2420 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
2421 return; | |
2422 } | |
2423 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2424 FileInfo info; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2425 if (GetAttachmentInfo(info, call) && |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2426 info.GetUncompressedMD5() != "") |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2427 { |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2428 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2429 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2430 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2431 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2432 |
974 | 2433 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2434 { |
4410 | 2435 if (call.IsDocumentation()) |
2436 { | |
2437 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2438 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2439 AddAttachmentDocumentation(call, r); |
4410 | 2440 call.GetDocumentation() |
2441 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2442 .SetSummary("Get MD5 of attachment on disk") | |
2443 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
4413 | 2444 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
4410 | 2445 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
2446 return; | |
2447 } | |
2448 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2449 FileInfo info; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2450 if (GetAttachmentInfo(info, call) && |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2451 info.GetCompressedMD5() != "") |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2452 { |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2453 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2454 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2455 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2456 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2457 |
974 | 2458 static void VerifyAttachment(RestApiPostCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2459 { |
4410 | 2460 if (call.IsDocumentation()) |
2461 { | |
2462 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2463 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2464 call.GetDocumentation() | |
2465 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2466 .SetSummary("Verify attachment") | |
2467 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
2468 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
4414 | 2469 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
4410 | 2470 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
2471 return; | |
2472 } | |
2473 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2474 ServerContext& context = OrthancRestApi::GetContext(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2475 CheckValidResourceType(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2476 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2477 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2478 std::string name = call.GetUriComponent("name", ""); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2479 FileContentType contentType = StringToContentType(name); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2480 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2481 FileInfo info; |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2482 int64_t revision; // Ignored |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2483 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2484 info.GetCompressedMD5() == "" || |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2485 info.GetUncompressedMD5() == "") |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2486 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2487 // Inexistent resource, or no MD5 available |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2488 return; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2489 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2490 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2491 bool ok = false; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2492 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2493 // First check whether the compressed data is correctly stored in the disk |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2494 std::string data; |
5048
22966345eaba
skip StorageCache when verifying md5 or when re-compressing attachments
Alain Mazy <am@osimis.io>
parents:
5003
diff
changeset
|
2495 context.ReadAttachment(data, revision, publicId, StringToContentType(name), false, true /* skipCache when you absolutely need the compressed data */); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2496 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2497 std::string actualMD5; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2498 Toolbox::ComputeMD5(actualMD5, data); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2499 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2500 if (actualMD5 == info.GetCompressedMD5()) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2501 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2502 // The compressed data is OK. If a compression algorithm was |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2503 // applied to it, now check the MD5 of the uncompressed data. |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2504 if (info.GetCompressionType() == CompressionType_None) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2505 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2506 ok = true; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2507 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2508 else |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2509 { |
5048
22966345eaba
skip StorageCache when verifying md5 or when re-compressing attachments
Alain Mazy <am@osimis.io>
parents:
5003
diff
changeset
|
2510 context.ReadAttachment(data, revision, publicId, StringToContentType(name), true, true /* skipCache when you absolutely need the compressed data */); |
751
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
2511 Toolbox::ComputeMD5(actualMD5, data); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2512 ok = (actualMD5 == info.GetUncompressedMD5()); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2513 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2514 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2515 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2516 if (ok) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2517 { |
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2518 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2519 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2520 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2521 else |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2522 { |
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2523 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2524 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2525 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2526 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2527 |
974 | 2528 static void UploadAttachment(RestApiPutCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2529 { |
4414 | 2530 if (call.IsDocumentation()) |
2531 { | |
2532 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2533 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2534 call.GetDocumentation() | |
2535 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2536 .SetSummary("Set attachment") | |
2537 .SetDescription("Attach a file to the given DICOM " + r + | |
2538 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
2539 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
2540 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
2541 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2542 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2543 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
4414 | 2544 return; |
2545 } | |
2546 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2547 ServerContext& context = OrthancRestApi::GetContext(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2548 CheckValidResourceType(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2549 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2550 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2551 std::string name = call.GetUriComponent("name", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2552 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2553 FileContentType contentType = StringToContentType(name); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2554 if (IsUserContentType(contentType)) // It is forbidden to modify internal attachments |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2555 { |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2556 int64_t oldRevision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2557 std::string oldMD5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2558 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2559 |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2560 if (!hasOldRevision) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2561 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2562 OrthancConfiguration::ReaderLock lock; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2563 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2564 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2565 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2566 // the actual value of "oldRevision" if the metadata is |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2567 // inexistent as expected |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2568 hasOldRevision = true; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2569 oldRevision = -1; // dummy value |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2570 oldMD5.clear(); // dummy value |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2571 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2572 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2573 |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2574 int64_t newRevision; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2575 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2576 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2577 |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2578 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2579 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2580 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2581 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2582 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2583 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2584 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2585 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2586 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2587 |
974 | 2588 static void DeleteAttachment(RestApiDeleteCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2589 { |
4413 | 2590 if (call.IsDocumentation()) |
2591 { | |
2592 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2593 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2594 call.GetDocumentation() | |
2595 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2596 .SetSummary("Delete attachment") | |
4414 | 2597 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
2598 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
4413 | 2599 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2600 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2601 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2602 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
4413 | 2603 return; |
2604 } | |
2605 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2606 CheckValidResourceType(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2607 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2608 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2609 std::string name = call.GetUriComponent("name", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2610 FileContentType contentType = StringToContentType(name); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2611 |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2612 bool allowed; |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2613 if (IsUserContentType(contentType)) |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2614 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2615 allowed = true; |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2616 } |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2617 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2618 { |
2940
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2619 OrthancConfiguration::ReaderLock lock; |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2620 |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2621 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2622 contentType == FileContentType_DicomAsJson) |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2623 { |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2624 allowed = true; |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2625 } |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2626 else |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2627 { |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2628 // It is forbidden to delete internal attachments, except for |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2629 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
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2935
diff
changeset
|
2630 // would be automatically reconstructed on the next GET call) |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2631 allowed = false; |
4767d36679ed
refactoring access to Orthanc configuration
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2935
diff
changeset
|
2632 } |
2128
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2127
diff
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|
2633 } |
9329ba17a069
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2127
diff
changeset
|
2634 |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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diff
changeset
|
2635 if (allowed) |
751
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refactoring of OrthancRestApi
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diff
changeset
|
2636 { |
4627
f7d5372b59b3
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4623
diff
changeset
|
2637 bool found; |
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2638 int64_t revision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2639 std::string md5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2640 if (GetRevisionHeader(revision, md5, call, "if-match")) |
4627
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2641 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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parents:
4627
diff
changeset
|
2642 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
4627
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2643 } |
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2644 else |
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2645 { |
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2646 OrthancConfiguration::ReaderLock lock; |
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2647 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2648 { |
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2649 throw OrthancException(ErrorCode_Revision, |
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2650 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
4627
f7d5372b59b3
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4623
diff
changeset
|
2651 } |
f7d5372b59b3
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parents:
4623
diff
changeset
|
2652 else |
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2653 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2654 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2655 false, -1 /* dummy value */, "" /* dummy value */); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2656 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2657 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2658 |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2659 if (found) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2660 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2661 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2662 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2663 else |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2664 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2665 throw OrthancException(ErrorCode_UnknownResource); |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2666 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2667 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2668 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2669 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2670 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2671 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2672 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2673 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2674 |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2675 template <enum CompressionType compression> |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2676 static void ChangeAttachmentCompression(RestApiPostCall& call) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2677 { |
4413 | 2678 if (call.IsDocumentation()) |
2679 { | |
2680 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2681 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2682 call.GetDocumentation() | |
2683 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2684 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
2685 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
2686 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
4414 | 2687 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
4413 | 2688 return; |
2689 } | |
2690 | |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2691 CheckValidResourceType(call); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2692 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2693 std::string publicId = call.GetUriComponent("id", ""); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2694 std::string name = call.GetUriComponent("name", ""); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2695 FileContentType contentType = StringToContentType(name); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2696 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2697 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2698 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2699 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2700 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2701 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2702 static void IsAttachmentCompressed(RestApiGetCall& call) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2703 { |
4413 | 2704 if (call.IsDocumentation()) |
2705 { | |
2706 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2707 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2708 AddAttachmentDocumentation(call, r); |
4413 | 2709 call.GetDocumentation() |
2710 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2711 .SetSummary("Is attachment compressed?") | |
2712 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
2713 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
2714 return; | |
2715 } | |
2716 | |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2717 FileInfo info; |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2718 if (GetAttachmentInfo(info, call)) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2719 { |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2720 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2721 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2722 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2723 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2724 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2725 |
782 | 2726 // Raw access to the DICOM tags of an instance ------------------------------ |
2727 | |
974 | 2728 static void GetRawContent(RestApiGetCall& call) |
782 | 2729 { |
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2730 if (call.IsDocumentation()) |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2731 { |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2732 call.GetDocumentation() |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2733 .SetTag("Instances") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2734 .SetSummary("Get raw tag") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2735 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2736 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2737 .SetUriArgument("...", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2738 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2739 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2740 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2741 "or JSON array containing the list of available tags if accessing a dataset"); |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2742 return; |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2743 } |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2744 |
782 | 2745 std::string id = call.GetUriComponent("id", ""); |
2746 | |
2747 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
2748 | |
2749 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
2750 } | |
2751 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2752 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2753 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2754 static bool ExtractSharedTags(Json::Value& shared, |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2755 ServerContext& context, |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2756 const std::string& publicId) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2757 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2758 // Retrieve all the instances of this patient/study/series |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2759 typedef std::list<std::string> Instances; |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2760 Instances instances; |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2761 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2762 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2763 // Loop over the instances |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2764 bool isFirst = true; |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2765 shared = Json::objectValue; |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2766 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2767 for (Instances::const_iterator it = instances.begin(); |
1303 | 2768 it != instances.end(); ++it) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2769 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2770 // Get the tags of the current instance, in the simplified format |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2771 Json::Value tags; |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2772 |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2773 try |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2774 { |
2124 | 2775 context.ReadDicomAsJson(tags, *it); |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2776 } |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2777 catch (OrthancException&) |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2778 { |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2779 // Race condition: This instance has been removed since |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2780 // (*). Ignore this instance. |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2781 continue; |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2782 } |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2783 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2784 if (tags.type() != Json::objectValue) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2785 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2786 return false; // Error |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2787 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2788 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2789 // Only keep the tags that are mapped to a string |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2790 Json::Value::Members members = tags.getMemberNames(); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2791 for (size_t i = 0; i < members.size(); i++) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2792 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2793 const Json::Value& tag = tags[members[i]]; |
abac5c83134f
simplified and extensive shared-tags
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parents:
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diff
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|
2794 if (tag.type() != Json::objectValue || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2795 tag["Type"].type() != Json::stringValue || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2796 tag["Type"].asString() != "String") |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2797 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2798 tags.removeMember(members[i]); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2799 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2800 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2801 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2802 if (isFirst) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
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|
2803 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2804 // This is the first instance, keep its tags as such |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2805 shared = tags; |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2806 isFirst = false; |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2807 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2808 else |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2809 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2810 // Loop over all the members of the shared tags extracted so |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2811 // far. If the value of one of these tags does not match its |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2812 // value in the current instance, remove it. |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2813 members = shared.getMemberNames(); |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2814 for (size_t i = 0; i < members.size(); i++) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2815 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2816 if (!tags.isMember(members[i]) || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2817 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2818 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2819 shared.removeMember(members[i]); |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2820 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2821 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2822 } |
1fbe89dc18b5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2823 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2824 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2825 return true; |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2826 } |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2827 |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2828 |
974 | 2829 static void GetSharedTags(RestApiGetCall& call) |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2830 { |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2831 if (call.IsDocumentation()) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2832 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2833 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2834 |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2835 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2836 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2837 call.GetDocumentation() |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2838 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
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|
2839 .SetSummary("Get shared tags") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2840 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2841 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2842 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2843 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2844 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2845 return; |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2846 } |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2847 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2848 ServerContext& context = OrthancRestApi::GetContext(call); |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2849 std::string publicId = call.GetUriComponent("id", ""); |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2850 |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2851 Json::Value sharedTags; |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2852 if (ExtractSharedTags(sharedTags, context, publicId)) |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2853 { |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2854 // Success: Send the value of the shared tags |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2855 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2856 } |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2857 } |
1fbe89dc18b5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2858 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2859 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2860 template <enum ResourceType resourceType, |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2861 enum DicomModule module> |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2862 static void GetModule(RestApiGetCall& call) |
963
81134ea872ff
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2863 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2864 if (call.IsDocumentation()) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2865 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2866 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2867 std::string m; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2868 switch (module) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2869 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2870 case DicomModule_Patient: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2871 m = "patient"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2872 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2873 case DicomModule_Study: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2874 m = "study"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2875 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2876 case DicomModule_Series: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2877 m = "series"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2878 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2879 case DicomModule_Instance: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2880 m = "instance"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2881 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2882 default: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2883 throw OrthancException(ErrorCode_ParameterOutOfRange); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2884 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2885 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2886 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2887 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2888 call.GetDocumentation() |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2889 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
2890 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2891 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
2892 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
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parents:
4716
diff
changeset
|
2893 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2894 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
2895 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2896 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2897 return; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2898 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2899 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2900 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2901 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2902 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2903 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2904 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2905 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2906 { |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2907 throw OrthancException(ErrorCode_NotImplemented); |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2908 } |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2909 |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2910 ServerContext& context = OrthancRestApi::GetContext(call); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2911 std::string publicId = call.GetUriComponent("id", ""); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2912 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2913 std::set<DicomTag> ignoreTagLength; |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2914 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2915 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2916 typedef std::set<DicomTag> ModuleTags; |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2917 ModuleTags moduleTags; |
1368 | 2918 DicomTag::AddTagsForModule(moduleTags, module); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2919 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2920 Json::Value tags; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2921 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2922 if (resourceType != ResourceType_Instance) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2923 { |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2924 // Retrieve all the instances of this patient/study/series |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2925 typedef std::list<std::string> Instances; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2926 Instances instances; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2927 context.GetIndex().GetChildInstances(instances, publicId); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2928 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2929 if (instances.empty()) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2930 { |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2931 return; // Error: No instance (should never happen) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2932 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2933 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2934 // Select one child instance |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2935 publicId = instances.front(); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2936 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2937 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2938 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2939 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2940 // Filter the tags of the instance according to the module |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2941 Json::Value result = Json::objectValue; |
1303 | 2942 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2943 { |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2944 std::string s = tag->Format(); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2945 if (tags.isMember(s)) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2946 { |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2947 result[s] = tags[s]; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2948 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2949 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2950 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2951 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2952 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2953 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2954 |
1722 | 2955 namespace |
2956 { | |
2957 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
2958 } | |
2959 | |
2960 | |
2961 static void AccumulateLookupResults(LookupResults& result, | |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2962 ServerIndex& index, |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2963 const DicomTag& tag, |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2964 const std::string& value, |
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2965 ResourceType level) |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2966 { |
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2967 std::vector<std::string> tmp; |
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
2968 index.LookupIdentifierExact(tmp, level, tag, value); |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2969 |
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2970 for (size_t i = 0; i < tmp.size(); i++) |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2971 { |
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2972 result.push_back(std::make_pair(level, tmp[i])); |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2973 } |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2974 } |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2975 |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2976 |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2977 static void Lookup(RestApiPostCall& call) |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2978 { |
4422 | 2979 if (call.IsDocumentation()) |
2980 { | |
2981 call.GetDocumentation() | |
2982 .SetTag("System") | |
2983 .SetSummary("Look for DICOM identifiers") | |
2984 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
2985 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
2986 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
2987 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
2988 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
2989 "DICOM resource that is stored by Orthanc"); | |
2990 return; | |
2991 } | |
2992 | |
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
2993 std::string tag; |
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
2994 call.BodyToString(tag); |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2995 |
1722 | 2996 LookupResults resources; |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2997 ServerIndex& index = OrthancRestApi::GetIndex(call); |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2998 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2999 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3000 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3001 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3002 |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3003 Json::Value result = Json::arrayValue; |
1722 | 3004 for (LookupResults::const_iterator |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3005 it = resources.begin(); it != resources.end(); ++it) |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3006 { |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3007 ResourceType type = it->first; |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3008 const std::string& id = it->second; |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3009 |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3010 Json::Value item = Json::objectValue; |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3011 item["Type"] = EnumerationToString(type); |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3012 item["ID"] = id; |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3013 item["Path"] = GetBasePath(type, id); |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3014 |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3015 result.append(item); |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3016 } |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3017 |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3018 call.GetOutput().AnswerJson(result); |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3019 } |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3020 |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3021 |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3022 namespace |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3023 { |
3021
2cbafb5d5a62
renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
3024 class FindVisitor : public ServerContext::ILookupVisitor |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3025 { |
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refactoring /tools/find using LookupResource::IVisitor
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3026 private: |
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refactoring /tools/find using LookupResource::IVisitor
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|
3027 bool isComplete_; |
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3028 std::list<std::string> resources_; |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
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|
3029 FindStorageAccessMode findStorageAccessMode_; |
4937
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include requested tags from storage if needed
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3030 |
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include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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3031 // cache the data we used during lookup and that we could reuse when building the answers |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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3032 std::map<std::string, std::string> instancesIds_; // the id of an instance for each found resource. |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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3033 std::map<std::string, boost::shared_ptr<DicomMap> > resourcesMainDicomTags_; // all tags read from DB for a resource (current level and upper levels) |
5060
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
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|
3034 std::map<std::string, boost::shared_ptr<Json::Value> > resourcesDicomAsJson_; // the dicom-as-json for a resource |
4937
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include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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|
3035 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3036 DicomToJsonFormat format_; |
3001
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diff
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|
3037 |
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|
3038 public: |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
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diff
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|
3039 explicit FindVisitor(DicomToJsonFormat format, FindStorageAccessMode findStorageAccessMode) : |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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|
3040 isComplete_(false), |
5058
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Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
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|
3041 findStorageAccessMode_(findStorageAccessMode), |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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|
3042 format_(format) |
3001
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3043 { |
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3044 } |
4205 | 3045 |
3046 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
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|
3047 { |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
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3048 return false; // (*) |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
3049 } |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
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3003
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|
3050 |
4205 | 3051 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
3001
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refactoring /tools/find using LookupResource::IVisitor
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|
3052 { |
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3053 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
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3054 } |
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diff
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|
3055 |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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|
3056 virtual void Visit(const std::string& publicId, |
4937
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3057 const std::string& instanceId, |
3f9b9865c8cc
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3058 const DicomMap& mainDicomTags, |
3f9b9865c8cc
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3059 const Json::Value* dicomAsJson) ORTHANC_OVERRIDE |
3001
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|
3060 { |
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refactoring /tools/find using LookupResource::IVisitor
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3061 resources_.push_back(publicId); |
4937
3f9b9865c8cc
include requested tags from storage if needed
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3062 instancesIds_[publicId] = instanceId; |
3f9b9865c8cc
include requested tags from storage if needed
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|
3063 resourcesMainDicomTags_[publicId].reset(mainDicomTags.Clone()); |
5060
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
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3064 if (dicomAsJson != NULL) |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
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diff
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|
3065 { |
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fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
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diff
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|
3066 resourcesDicomAsJson_[publicId].reset(new Json::Value(*dicomAsJson)); // keep our own copy because we might reuse it between lookup and answers |
e69a3ff39bc5
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Alain Mazy <am@osimis.io>
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|
3067 } |
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diff
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|
3068 else |
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3069 { |
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Alain Mazy <am@osimis.io>
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|
3070 resourcesDicomAsJson_[publicId] = boost::shared_ptr<Json::Value>(); |
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|
3071 } |
3001
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|
3072 } |
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refactoring /tools/find using LookupResource::IVisitor
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|
3073 |
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|
3074 void Answer(RestApiOutput& output, |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
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|
3075 ServerContext& context, |
3001
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parents:
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|
3076 ResourceType level, |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
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|
3077 bool expand, |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3078 const std::set<DicomTag>& requestedTags) const |
3001
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|
3079 { |
5058
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Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
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diff
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|
3080 AnswerListOfResources(output, context, resources_, instancesIds_, resourcesMainDicomTags_, resourcesDicomAsJson_, level, expand, format_, requestedTags, IsStorageAccessAllowedForAnswers(findStorageAccessMode_)); |
3001
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3081 } |
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refactoring /tools/find using LookupResource::IVisitor
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3082 }; |
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3083 } |
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|
3084 |
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|
3085 |
1354 | 3086 static void Find(RestApiPostCall& call) |
3087 { | |
2998 | 3088 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
3089 static const char* const KEY_EXPAND = "Expand"; | |
3090 static const char* const KEY_LEVEL = "Level"; | |
3091 static const char* const KEY_LIMIT = "Limit"; | |
3092 static const char* const KEY_QUERY = "Query"; | |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
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|
3093 static const char* const KEY_REQUESTED_TAGS = "RequestedTags"; |
2998 | 3094 static const char* const KEY_SINCE = "Since"; |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
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5227
diff
changeset
|
3095 static const char* const KEY_LABELS = "Labels"; // New in Orthanc 1.12.0 |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3096 static const char* const KEY_LABELS_CONSTRAINT = "LabelsConstraint"; // New in Orthanc 1.12.0 |
2998 | 3097 |
4421 | 3098 if (call.IsDocumentation()) |
3099 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3100 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3101 |
4421 | 3102 call.GetDocumentation() |
3103 .SetTag("System") | |
3104 .SetSummary("Look for local resources") | |
3105 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
3106 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
3107 "https://book.orthanc-server.com/users/rest.html#performing-finds-within-orthanc") | |
3108 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, | |
3109 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
3110 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
3111 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
3112 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
3113 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
3114 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
3115 "Limit the number of reported resources", false) | |
3116 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
3117 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
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|
3118 .SetRequestField(KEY_REQUESTED_TAGS, RestApiCallDocumentation::Type_JsonListOfStrings, |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3119 "A list of DICOM tags to include in the response (applicable only if \"Expand\" is set to true). " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3120 "The tags requested tags are returned in the 'RequestedTags' field in the response. " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3121 "Note that, if you are requesting tags that are not listed in the Main Dicom Tags stored in DB, building the response " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3122 "might be slow since Orthanc will need to access the DICOM files. If not specified, Orthanc will return " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3123 "all Main Dicom Tags to keep backward compatibility with Orthanc prior to 1.11.0.", false) |
4421 | 3124 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, |
3125 "Associative array containing the filter on the values of the DICOM tags", true) | |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3126 .SetRequestField(KEY_LABELS, RestApiCallDocumentation::Type_JsonListOfStrings, |
a7d95f951f8a
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Sebastien Jodogne <s.jodogne@gmail.com>
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5227
diff
changeset
|
3127 "List of strings specifying which labels to look for in the resources (new in Orthanc 1.12.0)", true) |
a7d95f951f8a
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diff
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|
3128 .SetRequestField(KEY_LABELS_CONSTRAINT, RestApiCallDocumentation::Type_String, |
a7d95f951f8a
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diff
changeset
|
3129 "Constraint on the labels, can be `All`, `Any`, or `None` (defaults to `All`, new in Orthanc 1.12.0)", true) |
4421 | 3130 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
3131 "about the reported resources (if `Expand` argument is `true`)"); | |
3132 return; | |
3133 } | |
3134 | |
1358 | 3135 ServerContext& context = OrthancRestApi::GetContext(call); |
1354 | 3136 |
3137 Json::Value request; | |
3001
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3138 if (!call.ParseJsonRequest(request) || |
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|
3139 request.type() != Json::objectValue) |
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|
3140 { |
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|
3141 throw OrthancException(ErrorCode_BadRequest, |
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|
3142 "The body must contain a JSON object"); |
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|
3143 } |
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|
3144 else if (!request.isMember(KEY_LEVEL) || |
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|
3145 request[KEY_LEVEL].type() != Json::stringValue) |
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|
3146 { |
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|
3147 throw OrthancException(ErrorCode_BadRequest, |
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refactoring /tools/find using LookupResource::IVisitor
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|
3148 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
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|
3149 } |
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|
3150 else if (!request.isMember(KEY_QUERY) && |
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changeset
|
3151 request[KEY_QUERY].type() != Json::objectValue) |
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|
3152 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3153 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3154 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3155 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3156 else if (request.isMember(KEY_CASE_SENSITIVE) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3157 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3158 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3159 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3160 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" must be a Boolean"); |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3161 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3162 else if (request.isMember(KEY_LIMIT) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3163 request[KEY_LIMIT].type() != Json::intValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3164 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3165 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3166 "Field \"" + std::string(KEY_LIMIT) + "\" must be an integer"); |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3167 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3168 else if (request.isMember(KEY_SINCE) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3169 request[KEY_SINCE].type() != Json::intValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3170 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3171 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3172 "Field \"" + std::string(KEY_SINCE) + "\" must be an integer"); |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3173 } |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3174 else if (request.isMember(KEY_REQUESTED_TAGS) && |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3175 request[KEY_REQUESTED_TAGS].type() != Json::arrayValue) |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3176 { |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3177 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3178 "Field \"" + std::string(KEY_REQUESTED_TAGS) + "\" must be an array"); |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3179 } |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3180 else if (request.isMember(KEY_LABELS) && |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3181 request[KEY_LABELS].type() != Json::arrayValue) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3182 { |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3183 throw OrthancException(ErrorCode_BadRequest, |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3184 "Field \"" + std::string(KEY_LABELS) + "\" must be an array of strings"); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3185 } |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3186 else if (request.isMember(KEY_LABELS_CONSTRAINT) && |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3187 request[KEY_LABELS_CONSTRAINT].type() != Json::stringValue) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3188 { |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3189 throw OrthancException(ErrorCode_BadRequest, |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3190 "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be an array of strings"); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3191 } |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3192 else |
1354 | 3193 { |
3194 bool expand = false; | |
2998 | 3195 if (request.isMember(KEY_EXPAND)) |
1354 | 3196 { |
2998 | 3197 expand = request[KEY_EXPAND].asBool(); |
1354 | 3198 } |
3199 | |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3200 bool caseSensitive = false; |
2998 | 3201 if (request.isMember(KEY_CASE_SENSITIVE)) |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3202 { |
2998 | 3203 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3204 } |
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3205 |
1758 | 3206 size_t limit = 0; |
2998 | 3207 if (request.isMember(KEY_LIMIT)) |
1758 | 3208 { |
2998 | 3209 int tmp = request[KEY_LIMIT].asInt(); |
1847 | 3210 if (tmp < 0) |
1758 | 3211 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3212 throw OrthancException(ErrorCode_ParameterOutOfRange, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3213 "Field \"" + std::string(KEY_LIMIT) + "\" must be a positive integer"); |
1758 | 3214 } |
1847 | 3215 |
3216 limit = static_cast<size_t>(tmp); | |
1758 | 3217 } |
3218 | |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3219 size_t since = 0; |
2998 | 3220 if (request.isMember(KEY_SINCE)) |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3221 { |
2998 | 3222 int tmp = request[KEY_SINCE].asInt(); |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3223 if (tmp < 0) |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3224 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3225 throw OrthancException(ErrorCode_ParameterOutOfRange, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3226 "Field \"" + std::string(KEY_SINCE) + "\" must be a positive integer"); |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3227 } |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3228 |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3229 since = static_cast<size_t>(tmp); |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3230 } |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3231 |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3232 std::set<DicomTag> requestedTags; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3233 |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3234 if (request.isMember(KEY_REQUESTED_TAGS)) |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3235 { |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3236 FromDcmtkBridge::ParseListOfTags(requestedTags, request[KEY_REQUESTED_TAGS]); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3237 } |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3238 |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3239 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
1360 | 3240 |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3241 DatabaseLookup query; |
1358 | 3242 |
2998 | 3243 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
1354 | 3244 for (size_t i = 0; i < members.size(); i++) |
3245 { | |
2998 | 3246 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
1354 | 3247 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3248 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3249 "Tag \"" + members[i] + "\" must be associated with a string"); |
1354 | 3250 } |
3251 | |
3163
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3252 const std::string value = request[KEY_QUERY][members[i]].asString(); |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3253 |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3254 if (!value.empty()) |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3255 { |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3256 // An empty string corresponds to an universal constraint, |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3257 // so we ignore it. This mimics the behavior of class |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3258 // "OrthancFindRequestHandler" |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3259 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3260 value, caseSensitive, true); |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3261 } |
1361
94ffb597d297
refactoring of C-Find SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1360
diff
changeset
|
3262 } |
2876 | 3263 |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3264 if (request.isMember(KEY_LABELS)) // New in Orthanc 1.12.0 |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3265 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3266 for (Json::Value::ArrayIndex i = 0; i < request[KEY_LABELS].size(); i++) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3267 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3268 if (request[KEY_LABELS][i].type() != Json::stringValue) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3269 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3270 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS) + "\" must contain strings"); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3271 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3272 else |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3273 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3274 query.AddLabel(request[KEY_LABELS][i].asString()); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3275 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3276 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3277 } |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3278 |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3279 query.SetLabelsConstraint(LabelsConstraint_All); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3280 |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3281 if (request.isMember(KEY_LABELS_CONSTRAINT)) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3282 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3283 const std::string& s = request[KEY_LABELS_CONSTRAINT].asString(); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3284 if (s == "All") |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3285 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3286 query.SetLabelsConstraint(LabelsConstraint_All); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3287 } |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3288 else if (s == "Any") |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3289 { |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3290 query.SetLabelsConstraint(LabelsConstraint_Any); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3291 } |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3292 else if (s == "None") |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3293 { |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3294 query.SetLabelsConstraint(LabelsConstraint_None); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3295 } |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3296 else |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3297 { |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3298 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be \"All\", \"Any\", or \"None\""); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3299 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3300 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3301 |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3302 FindVisitor visitor(OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human), context.GetFindStorageAccessMode()); |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3303 context.Apply(visitor, query, level, since, limit); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3304 visitor.Answer(call.GetOutput(), context, level, expand, requestedTags); |
1354 | 3305 } |
3306 } | |
3307 | |
3308 | |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3309 template <enum ResourceType start, |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3310 enum ResourceType end> |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3311 static void GetChildResources(RestApiGetCall& call) |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3312 { |
4415 | 3313 if (call.IsDocumentation()) |
3314 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3315 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3316 OrthancRestApi::DocumentRequestedTags(call); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3317 |
4415 | 3318 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
3319 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
3320 call.GetDocumentation() | |
3321 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
3322 .SetSummary("Get child " + children) | |
3323 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3324 resource + " whose Orthanc identifier is provided in the URL") |
4415 | 3325 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
3326 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) | |
3327 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
3328 return; | |
3329 } | |
3330 | |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3331 ServerIndex& index = OrthancRestApi::GetIndex(call); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3332 |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3333 std::set<DicomTag> requestedTags; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3334 OrthancRestApi::GetRequestedTags(requestedTags, call); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3335 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3336 std::list<std::string> a, b, c; |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3337 a.push_back(call.GetUriComponent("id", "")); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3338 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3339 ResourceType type = start; |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3340 while (type != end) |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3341 { |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3342 b.clear(); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3343 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3344 for (std::list<std::string>::const_iterator |
1303 | 3345 it = a.begin(); it != a.end(); ++it) |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3346 { |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3347 index.GetChildren(c, *it); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3348 b.splice(b.begin(), c); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3349 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3350 |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3351 type = GetChildResourceType(type); |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3352 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3353 a.clear(); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3354 a.splice(a.begin(), b); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3355 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3356 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3357 Json::Value result = Json::arrayValue; |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3358 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3359 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3360 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3361 for (std::list<std::string>::const_iterator |
1303 | 3362 it = a.begin(); it != a.end(); ++it) |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3363 { |
4554 | 3364 Json::Value resource; |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3365 if (OrthancRestApi::GetContext(call).ExpandResource(resource, *it, end, format, requestedTags, true /* allowStorageAccess */)) |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3366 { |
4554 | 3367 result.append(resource); |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3368 } |
94c5f6623b3a
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parents:
1139
diff
changeset
|
3369 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
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parents:
1139
diff
changeset
|
3370 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3371 call.GetOutput().AnswerJson(result); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3372 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3373 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
3374 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3375 static void GetChildInstancesTags(RestApiGetCall& call) |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3376 { |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3377 if (call.IsDocumentation()) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3378 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3379 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3380 |
4416
0b27841950d5
openapi about creation of zip/media archives
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parents:
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diff
changeset
|
3381 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3382 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
0b27841950d5
openapi about creation of zip/media archives
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parents:
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diff
changeset
|
3383 call.GetDocumentation() |
0b27841950d5
openapi about creation of zip/media archives
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diff
changeset
|
3384 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
0b27841950d5
openapi about creation of zip/media archives
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diff
changeset
|
3385 .SetSummary("Get tags of instances") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3386 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3387 " whose Orthanc identifier is provided in the URL") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3388 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3389 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3390 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3391 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3392 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3393 return; |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3394 } |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3395 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3396 ServerContext& context = OrthancRestApi::GetContext(call); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3397 std::string publicId = call.GetUriComponent("id", ""); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3398 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
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|
3399 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3400 std::set<DicomTag> ignoreTagLength; |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3401 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3402 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3403 // Retrieve all the instances of this patient/study/series |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3404 typedef std::list<std::string> Instances; |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3405 Instances instances; |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3406 |
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3407 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3408 |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3409 Json::Value result = Json::objectValue; |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3410 |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3411 for (Instances::const_iterator it = instances.begin(); |
1303 | 3412 it != instances.end(); ++it) |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3413 { |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3414 Json::Value full; |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3415 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3416 |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3417 if (format != DicomToJsonFormat_Full) |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3418 { |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3419 Json::Value simplified; |
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
3420 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3421 result[*it] = simplified; |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3422 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3423 else |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3424 { |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3425 result[*it] = full; |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3426 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3427 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3428 |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3429 call.GetOutput().AnswerJson(result); |
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3430 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3431 |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3432 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3433 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3434 template <enum ResourceType start, |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3435 enum ResourceType end> |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3436 static void GetParentResource(RestApiGetCall& call) |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3437 { |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3438 assert(start > end); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3439 |
4415 | 3440 if (call.IsDocumentation()) |
3441 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3442 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3443 OrthancRestApi::DocumentRequestedTags(call); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3444 |
4415 | 3445 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
3446 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
3447 call.GetDocumentation() | |
3448 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
3449 .SetSummary("Get parent " + parent) | |
3450 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3451 resource + " whose Orthanc identifier is provided in the URL") |
4415 | 3452 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
3453 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
3454 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
3455 return; | |
3456 } | |
3457 | |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3458 ServerIndex& index = OrthancRestApi::GetIndex(call); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3459 |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3460 std::set<DicomTag> requestedTags; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3461 OrthancRestApi::GetRequestedTags(requestedTags, call); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3462 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3463 std::string current = call.GetUriComponent("id", ""); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3464 ResourceType currentType = start; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3465 while (currentType > end) |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3466 { |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3467 std::string parent; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
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|
3468 if (!index.LookupParent(parent, current)) |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3469 { |
8dac11c78d71
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Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3470 // Error that could happen if the resource gets deleted by |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3471 // another concurrent call |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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1276
diff
changeset
|
3472 return; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3473 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3474 |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3475 current = parent; |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
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1509
diff
changeset
|
3476 currentType = GetParentResourceType(currentType); |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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diff
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|
3477 } |
8dac11c78d71
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3478 |
8dac11c78d71
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diff
changeset
|
3479 assert(currentType == end); |
8dac11c78d71
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diff
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|
3480 |
4697
569d9ef165b1
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Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
3481 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
569d9ef165b1
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diff
changeset
|
3482 |
4554 | 3483 Json::Value resource; |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3484 if (OrthancRestApi::GetContext(call).ExpandResource(resource, current, end, format, requestedTags, true /* allowStorageAccess */)) |
1281
8dac11c78d71
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diff
changeset
|
3485 { |
4554 | 3486 call.GetOutput().AnswerJson(resource); |
1281
8dac11c78d71
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diff
changeset
|
3487 } |
8dac11c78d71
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diff
changeset
|
3488 } |
8dac11c78d71
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diff
changeset
|
3489 |
8dac11c78d71
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diff
changeset
|
3490 |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
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1555
diff
changeset
|
3491 static void ExtractPdf(RestApiGetCall& call) |
b8dc2f855a83
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diff
changeset
|
3492 { |
4407 | 3493 if (call.IsDocumentation()) |
3494 { | |
3495 call.GetDocumentation() | |
3496 .SetTag("Instances") | |
3497 .SetSummary("Get embedded PDF") | |
3498 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
3499 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
3500 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
3501 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
3502 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
3503 return; | |
3504 } | |
3505 | |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
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diff
changeset
|
3506 const std::string id = call.GetUriComponent("id", ""); |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
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diff
changeset
|
3507 std::string pdf; |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
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diff
changeset
|
3508 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
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diff
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|
3509 |
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Preview of PDF files encapsulated in DICOM from Orthanc Explorer
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diff
changeset
|
3510 if (locker.GetDicom().ExtractPdf(pdf)) |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
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diff
changeset
|
3511 { |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
3512 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
1556
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Preview of PDF files encapsulated in DICOM from Orthanc Explorer
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diff
changeset
|
3513 return; |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
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diff
changeset
|
3514 } |
b8dc2f855a83
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diff
changeset
|
3515 } |
b8dc2f855a83
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1555
diff
changeset
|
3516 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3517 |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3518 static void OrderSlices(RestApiGetCall& call) |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3519 { |
4421 | 3520 if (call.IsDocumentation()) |
3521 { | |
3522 call.GetDocumentation() | |
3523 .SetDeprecated() | |
3524 .SetTag("Series") | |
3525 .SetSummary("Order the slices") | |
3526 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
3527 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
3528 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
3529 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
3530 "Ordered list of paths to DICOM instances") | |
3531 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
3532 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
3533 "in the case of multiframe images.") | |
3534 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
3535 "Same information as the `Slices` field, but in a compact form") | |
3536 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
3537 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
3538 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); | |
3539 return; | |
3540 } | |
3541 | |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3542 const std::string id = call.GetUriComponent("id", ""); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3543 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3544 ServerIndex& index = OrthancRestApi::GetIndex(call); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3545 SliceOrdering ordering(index, id); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3546 |
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3547 Json::Value result; |
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3548 ordering.Format(result); |
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3549 call.GetOutput().AnswerJson(result); |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3550 } |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3551 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3552 |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3553 static void GetInstanceHeader(RestApiGetCall& call) |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3554 { |
4404 | 3555 if (call.IsDocumentation()) |
3556 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3557 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
4404 | 3558 call.GetDocumentation() |
3559 .SetTag("Instances") | |
3560 .SetSummary("Get DICOM meta-header") | |
3561 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
3562 "combines hexadecimal tags with human-readable description.") | |
3563 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
3564 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
3565 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); | |
3566 return; | |
3567 } | |
3568 | |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3569 ServerContext& context = OrthancRestApi::GetContext(call); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3570 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3571 std::string publicId = call.GetUriComponent("id", ""); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3572 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3573 std::string dicomContent; |
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
3574 context.ReadDicomForHeader(dicomContent, publicId); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3575 |
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3576 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3577 // speed up things here |
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3578 |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3579 ParsedDicomFile dicom(dicomContent); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3580 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3581 Json::Value header; |
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3582 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3583 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3584 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3585 } |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3586 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3587 |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3588 static void InvalidateTags(RestApiPostCall& call) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3589 { |
4420 | 3590 if (call.IsDocumentation()) |
3591 { | |
3592 call.GetDocumentation() | |
3593 .SetTag("System") | |
3594 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
3595 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
3596 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
3597 "This is notably useful after changes to the `Dictionary` configuration option. " | |
3598 "https://book.orthanc-server.com/faq/orthanc-storage.html#storage-area"); | |
3599 return; | |
3600 } | |
3601 | |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3602 ServerIndex& index = OrthancRestApi::GetIndex(call); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3603 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3604 // Loop over the instances, grouping them by parent studies so as |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3605 // to avoid large memory consumption |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3606 std::list<std::string> studies; |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3607 index.GetAllUuids(studies, ResourceType_Study); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3608 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3609 for (std::list<std::string>::const_iterator |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3610 study = studies.begin(); study != studies.end(); ++study) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3611 { |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3612 std::list<std::string> instances; |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3613 index.GetChildInstances(instances, *study); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3614 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3615 for (std::list<std::string>::const_iterator |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3616 instance = instances.begin(); instance != instances.end(); ++instance) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3617 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3618 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3619 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3620 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3621 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3622 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3623 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3624 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3625 |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3626 void DocumentReconstructFilesField(RestApiPostCall& call) |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3627 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3628 call.GetDocumentation() |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3629 .SetRequestField(RECONSTRUCT_FILES, RestApiCallDocumentation::Type_Boolean, |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3630 "Also reconstruct the files of the resources (e.g: apply IngestTranscoding, StorageCompression). " |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3631 "'false' by default. (New in Orthanc 1.11.0)", false); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3632 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3633 |
4994 | 3634 bool GetReconstructFilesField(const RestApiPostCall& call) |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3635 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3636 bool reconstructFiles = false; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3637 Json::Value request; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3638 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3639 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(RECONSTRUCT_FILES)) // allow "" payload to keep backward compatibility |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3640 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3641 if (!request[RECONSTRUCT_FILES].isBool()) |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3642 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3643 throw OrthancException(ErrorCode_BadFileFormat, |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3644 "The field " + std::string(RECONSTRUCT_FILES) + " must contain a Boolean"); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3645 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3646 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3647 reconstructFiles = request[RECONSTRUCT_FILES].asBool(); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3648 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3649 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3650 return reconstructFiles; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3651 } |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3652 |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3653 template <enum ResourceType type> |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3654 static void ReconstructResource(RestApiPostCall& call) |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3655 { |
4420 | 3656 if (call.IsDocumentation()) |
3657 { | |
3658 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
3659 call.GetDocumentation() | |
3660 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3661 .SetSummary("Reconstruct tags & optionally files of " + resource) |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3662 .SetDescription("Reconstruct the main DICOM tags in DB of the " + resource + " whose Orthanc identifier is provided " |
4420 | 3663 "in the URL. This is useful if child studies/series/instances have inconsistent values for " |
3664 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
3665 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
3666 "parsed again, and the Orthanc index will be updated accordingly.") | |
3667 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3668 DocumentReconstructFilesField(call); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3669 |
4420 | 3670 return; |
3671 } | |
3672 | |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3673 ServerContext& context = OrthancRestApi::GetContext(call); |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3674 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", ""), GetReconstructFilesField(call)); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3675 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3676 } |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3677 |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3678 |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3679 static void ReconstructAllResources(RestApiPostCall& call) |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3680 { |
4420 | 3681 if (call.IsDocumentation()) |
3682 { | |
3683 call.GetDocumentation() | |
3684 .SetTag("System") | |
3685 .SetSummary("Reconstruct all the index") | |
3686 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
3687 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
3688 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3689 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated. " |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3690 "If you have a large database to process, it is advised to use the Housekeeper plugin to perform " |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3691 "this action resource by resource"); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3692 DocumentReconstructFilesField(call); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3693 |
4420 | 3694 return; |
3695 } | |
3696 | |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3697 ServerContext& context = OrthancRestApi::GetContext(call); |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3698 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3699 std::list<std::string> studies; |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3700 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3701 bool reconstructFiles = GetReconstructFilesField(call); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3702 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3703 for (std::list<std::string>::const_iterator |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3704 study = studies.begin(); study != studies.end(); ++study) |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3705 { |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3706 ServerToolbox::ReconstructResource(context, *study, reconstructFiles); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3707 } |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3708 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3709 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3710 } |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3711 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3712 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3713 static void GetBulkChildren(std::set<std::string>& target, |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3714 ServerIndex& index, |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3715 const std::set<std::string>& source) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3716 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3717 target.clear(); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3718 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3719 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3720 it = source.begin(); it != source.end(); ++it) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3721 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3722 std::list<std::string> children; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3723 index.GetChildren(children, *it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3724 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3725 for (std::list<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3726 child = children.begin(); child != children.end(); ++child) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3727 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3728 target.insert(*child); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3729 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3730 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3731 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3732 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3733 |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3734 static void AddMetadata(Json::Value& target, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3735 ServerIndex& index, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3736 const std::string& resource, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3737 ResourceType level) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3738 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3739 target = Json::objectValue; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3740 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3741 std::map<MetadataType, std::string> content; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3742 index.GetAllMetadata(content, resource, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3743 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3744 for (std::map<MetadataType, std::string>::const_iterator |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3745 it = content.begin(); it != content.end(); ++it) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3746 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3747 target[EnumerationToString(it->first)] = it->second; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3748 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3749 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3750 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3751 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3752 static void BulkContent(RestApiPostCall& call) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3753 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3754 static const char* const LEVEL = "Level"; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3755 static const char* const METADATA = "Metadata"; |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3756 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3757 if (call.IsDocumentation()) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3758 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3759 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3760 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3761 call.GetDocumentation() |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3762 .SetTag("System") |
4879 | 3763 .SetSummary("Describe a set of resources") |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3764 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3765 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3766 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3767 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3768 "`Instance`). Orthanc will loop over the items inside `Resources`, and explore upward or " |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3769 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3770 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3771 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3772 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3773 "whose identifiers are provided in the `Resources` field, in one single call."); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3774 return; |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3775 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3776 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3777 Json::Value request; |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3778 if (!call.ParseJsonRequest(request) || |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3779 request.type() != Json::objectValue) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3780 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3781 throw OrthancException(ErrorCode_BadRequest, |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3782 "The body must contain a JSON object"); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3783 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3784 else |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3785 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3786 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3787 |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3788 bool metadata = true; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3789 if (request.isMember(METADATA)) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3790 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3791 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3792 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3793 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3794 ServerIndex& index = OrthancRestApi::GetIndex(call); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3795 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3796 Json::Value answer = Json::arrayValue; |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3797 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3798 if (request.isMember(LEVEL)) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3799 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3800 // Complex case: Need to explore the DICOM hierarchy |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3801 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3802 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3803 std::set<std::string> resources; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3804 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3805 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3806 std::set<std::string> interest; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3807 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3808 assert(ResourceType_Patient < ResourceType_Study && |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3809 ResourceType_Study < ResourceType_Series && |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3810 ResourceType_Series < ResourceType_Instance); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3811 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3812 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3813 it = resources.begin(); it != resources.end(); ++it) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3814 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3815 ResourceType type; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3816 if (index.LookupResourceType(type, *it)) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3817 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3818 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3819 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3820 // This resource is already from the level of interest |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3821 interest.insert(*it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3822 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3823 else if (type < level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3824 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3825 // Need to explore children |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3826 std::set<std::string> current; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3827 current.insert(*it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3828 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3829 for (;;) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3830 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3831 std::set<std::string> children; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3832 GetBulkChildren(children, index, current); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3833 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3834 type = GetChildResourceType(type); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3835 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3836 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3837 for (std::set<std::string>::const_iterator |
4716 | 3838 it2 = children.begin(); it2 != children.end(); ++it2) |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3839 { |
4716 | 3840 interest.insert(*it2); |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3841 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3842 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3843 break; // done |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3844 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3845 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3846 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3847 current.swap(children); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3848 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3849 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3850 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3851 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3852 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3853 // Need to explore parents |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3854 std::string current = *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3855 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3856 for (;;) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3857 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3858 std::string parent; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3859 if (index.LookupParent(parent, current)) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3860 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3861 type = GetParentResourceType(type); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3862 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3863 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3864 interest.insert(parent); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3865 break; // done |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3866 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3867 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3868 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3869 current = parent; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3870 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3871 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3872 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3873 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3874 break; // The resource has been deleted during the exploration |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3875 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3876 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3877 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3878 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3879 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3880 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3881 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3882 } |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3883 } |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3884 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3885 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3886 it = interest.begin(); it != interest.end(); ++it) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3887 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3888 Json::Value item; |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3889 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3890 |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3891 if (OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3892 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3893 if (metadata) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3894 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3895 AddMetadata(item[METADATA], index, *it, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3896 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3897 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3898 answer.append(item); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3899 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3900 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3901 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3902 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3903 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3904 // Simple case: We return the queried resources as such |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3905 std::list<std::string> resources; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3906 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3907 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3908 for (std::list<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3909 it = resources.begin(); it != resources.end(); ++it) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3910 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3911 ResourceType level; |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3912 Json::Value item; |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3913 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3914 |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3915 if (index.LookupResourceType(level, *it) && |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3916 OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3917 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3918 if (metadata) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3919 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3920 AddMetadata(item[METADATA], index, *it, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3921 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3922 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3923 answer.append(item); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3924 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3925 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3926 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3927 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3928 } |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3929 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3930 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3931 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3932 call.GetOutput().AnswerJson(answer); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3933 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3934 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3935 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3936 |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3937 static void BulkDelete(RestApiPostCall& call) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3938 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3939 if (call.IsDocumentation()) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3940 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3941 call.GetDocumentation() |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3942 .SetTag("System") |
4879 | 3943 .SetSummary("Delete a set of resources") |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3944 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3945 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3946 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3947 "whose identifiers are provided in the `Resources` field."); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3948 return; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3949 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3950 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3951 ServerContext& context = OrthancRestApi::GetContext(call); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3952 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3953 Json::Value request; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3954 if (!call.ParseJsonRequest(request) || |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3955 request.type() != Json::objectValue) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3956 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3957 throw OrthancException(ErrorCode_BadRequest, |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3958 "The body must contain a JSON object"); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3959 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3960 else |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3961 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3962 std::set<std::string> resources; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3963 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3964 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3965 for (std::set<std::string>::const_iterator |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3966 it = resources.begin(); it != resources.end(); ++it) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3967 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3968 ResourceType type; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3969 Json::Value remainingAncestor; // Unused |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3970 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3971 if (!context.GetIndex().LookupResourceType(type, *it) || |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3972 !context.DeleteResource(remainingAncestor, *it, type)) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3973 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3974 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3975 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3976 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3977 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3978 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3979 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3980 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3981 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3982 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3983 void OrthancRestApi::RegisterResources() |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3984 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3985 Register("/instances", ListResources<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3986 Register("/patients", ListResources<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3987 Register("/series", ListResources<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3988 Register("/studies", ListResources<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3989 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3990 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3991 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3992 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3993 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3994 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3995 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3996 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3997 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3998 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3999 Register("/instances/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4000 Register("/patients/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4001 Register("/studies/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4002 Register("/series/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4003 |
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4004 Register("/patients/{id}/shared-tags", GetSharedTags); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4005 Register("/series/{id}/shared-tags", GetSharedTags); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4006 Register("/studies/{id}/shared-tags", GetSharedTags); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
4007 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4008 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4009 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4010 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4011 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4012 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
4013 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4014 Register("/instances/{id}/file", GetInstanceFile); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4015 Register("/instances/{id}/export", ExportInstanceFile); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4016 Register("/instances/{id}/tags", GetInstanceTags); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4017 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4018 Register("/instances/{id}/frames", ListFrames); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4019 |
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
4020 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4021 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4022 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4023 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4024 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4025 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4026 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4027 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4028 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4029 Register("/instances/{id}/frames/{frame}/numpy", GetNumpyFrame); // New in Orthanc 1.10.0 |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
4030 Register("/instances/{id}/pdf", ExtractPdf); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4031 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4032 Register("/instances/{id}/rendered", GetRenderedFrame); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4033 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4034 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4035 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4036 Register("/instances/{id}/matlab", GetMatlabImage); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4037 Register("/instances/{id}/header", GetInstanceHeader); |
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4038 Register("/instances/{id}/numpy", GetNumpyInstance); // New in Orthanc 1.10.0 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4039 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4040 Register("/patients/{id}/protected", IsProtectedPatient); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4041 Register("/patients/{id}/protected", SetPatientProtection); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4042 |
4409 | 4043 std::vector<std::string> resourceTypes; |
4044 resourceTypes.push_back("patients"); | |
4045 resourceTypes.push_back("studies"); | |
4046 resourceTypes.push_back("series"); | |
4047 resourceTypes.push_back("instances"); | |
4048 | |
4049 for (size_t i = 0; i < resourceTypes.size(); i++) | |
4050 { | |
4051 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
4052 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
4053 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
4054 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4055 |
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4056 // New in Orthanc 1.12.0 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4057 Register("/" + resourceTypes[i] + "/{id}/labels", ListLabels); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4058 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", GetLabel); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4059 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", RemoveLabel); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4060 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", AddLabel); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4061 |
4409 | 4062 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
4063 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
4064 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
4065 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
4066 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
4067 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
4068 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
4069 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
4070 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
4071 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
4072 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
4073 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
4074 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
4075 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/info", GetAttachmentInfo); |
4409 | 4076 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); |
4077 } | |
782 | 4078 |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4079 Register("/tools/invalidate-tags", InvalidateTags); |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4080 Register("/tools/lookup", Lookup); |
1354 | 4081 Register("/tools/find", Find); |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4082 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4083 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4084 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4085 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4086 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4087 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4088 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4089 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4090 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4091 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4092 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4093 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4094 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4095 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4096 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4097 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4098 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4099 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4100 |
782 | 4101 Register("/instances/{id}/content/*", GetRawContent); |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4102 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4103 Register("/series/{id}/ordered-slices", OrderSlices); |
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4104 Register("/series/{id}/numpy", GetNumpySeries); // New in Orthanc 1.10.0 |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4105 |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4106 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4107 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4108 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4109 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4110 Register("/tools/reconstruct", ReconstructAllResources); |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4111 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4112 Register("/tools/bulk-content", BulkContent); |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4113 Register("/tools/bulk-delete", BulkDelete); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4114 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4115 } |