Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 5565:def06a42e5ef find-refactoring
Updated FindRequest & FindResponse definitions
author | Alain Mazy <am@orthanc.team> |
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date | Tue, 23 Apr 2024 13:07:38 +0200 |
parents | 12d8a1a266e9 |
children | b0b5546f1b9f |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2024 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU General Public License |
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "../PrecompiledHeadersServer.h" |
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24 #include "OrthancRestApi.h" |
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25 |
4045 | 26 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
27 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
28 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
29 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
30 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
31 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
32 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
33 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
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34 #include "../../../OrthancFramework/Sources/Images/NumpyWriter.h" |
4045 | 35 #include "../../../OrthancFramework/Sources/Logging.h" |
36 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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37 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
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39 #include "../OrthancConfiguration.h" |
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40 #include "../Search/DatabaseLookup.h" |
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41 #include "../ServerContext.h" |
2131 | 42 #include "../ServerToolbox.h" |
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43 #include "../SliceOrdering.h" |
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44 |
3687 | 45 // This "include" is mandatory for Release builds using Linux Standard Base |
46 #include <boost/math/special_functions/round.hpp> | |
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47 #include <boost/shared_ptr.hpp> |
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48 |
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49 /** |
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50 * This semaphore is used to limit the number of concurrent HTTP |
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51 * requests on CPU-intensive routes of the REST API, in order to |
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52 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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53 **/ |
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54 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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55 |
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56 |
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57 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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58 |
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59 static const char* const IGNORE_LENGTH = "ignore-length"; |
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60 static const char* const RECONSTRUCT_FILES = "ReconstructFiles"; |
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61 |
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62 |
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63 namespace Orthanc |
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64 { |
4415 | 65 static std::string GetDocumentationSampleResource(ResourceType type) |
66 { | |
67 switch (type) | |
68 { | |
69 case Orthanc::ResourceType_Instance: | |
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70 return "https://orthanc.uclouvain.be/demo/instances/6582b1c0-292ad5ab-ba0f088f-f7a1766f-9a29a54f"; |
4415 | 71 break; |
72 | |
73 case Orthanc::ResourceType_Series: | |
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74 return "https://orthanc.uclouvain.be/demo/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; |
4415 | 75 break; |
76 | |
77 case Orthanc::ResourceType_Study: | |
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78 return "https://orthanc.uclouvain.be/demo/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; |
4415 | 79 break; |
80 | |
81 case Orthanc::ResourceType_Patient: | |
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82 return "https://orthanc.uclouvain.be/demo/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; |
4415 | 83 break; |
84 | |
85 default: | |
86 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
87 } | |
88 } | |
89 | |
90 | |
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91 static void AnswerDicomAsJson(RestApiCall& call, |
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92 const Json::Value& dicom, |
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93 DicomToJsonFormat mode) |
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94 { |
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95 if (mode != DicomToJsonFormat_Full) |
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96 { |
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97 Json::Value simplified; |
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98 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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99 call.GetOutput().AnswerJson(simplified); |
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100 } |
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101 else |
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102 { |
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103 call.GetOutput().AnswerJson(dicom); |
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104 } |
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105 } |
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106 |
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107 |
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108 static void ParseSetOfTags(std::set<DicomTag>& target, |
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109 const RestApiGetCall& call, |
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110 const std::string& argument) |
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111 { |
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112 target.clear(); |
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113 |
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114 if (call.HasArgument(argument)) |
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115 { |
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116 std::vector<std::string> tags; |
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117 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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118 |
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119 for (size_t i = 0; i < tags.size(); i++) |
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120 { |
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121 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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122 } |
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123 } |
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124 } |
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125 |
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126 |
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127 // List all the patients, studies, series or instances ---------------------- |
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128 |
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129 static void AnswerListOfResources1(RestApiOutput& output, |
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130 ServerContext& context, |
1354 | 131 const std::list<std::string>& resources, |
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132 const std::map<std::string, std::string>& instancesIds, // optional: the id of an instance for each found resource. |
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133 const std::map<std::string, boost::shared_ptr<DicomMap> >& resourcesMainDicomTags, // optional: all tags read from DB for a resource (current level and upper levels) |
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134 const std::map<std::string, boost::shared_ptr<Json::Value> >& resourcesDicomAsJson, // optional: the dicom-as-json for each resource |
1354 | 135 ResourceType level, |
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136 bool expand, |
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137 DicomToJsonFormat format, |
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138 const std::set<DicomTag>& requestedTags, |
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139 bool allowStorageAccess) |
1354 | 140 { |
141 Json::Value answer = Json::arrayValue; | |
142 | |
143 for (std::list<std::string>::const_iterator | |
1384 | 144 resource = resources.begin(); resource != resources.end(); ++resource) |
1354 | 145 { |
146 if (expand) | |
147 { | |
4554 | 148 Json::Value expanded; |
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149 |
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150 std::map<std::string, std::string>::const_iterator instanceId = instancesIds.find(*resource); |
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151 if (instanceId != instancesIds.end()) // if it is found in instancesIds, it is also in resourcesDicomAsJson and mainDicomTags |
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152 { |
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153 // reuse data already collected before (e.g during lookup) |
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154 std::map<std::string, boost::shared_ptr<DicomMap> >::const_iterator mainDicomTags = resourcesMainDicomTags.find(*resource); |
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155 std::map<std::string, boost::shared_ptr<Json::Value> >::const_iterator dicomAsJson = resourcesDicomAsJson.find(*resource); |
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156 |
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157 context.ExpandResource(expanded, *resource, |
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158 *(mainDicomTags->second.get()), |
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159 instanceId->second, |
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160 dicomAsJson->second.get(), |
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161 level, format, requestedTags, allowStorageAccess); |
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162 } |
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163 else |
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164 { |
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165 context.ExpandResource(expanded, *resource, level, format, requestedTags, allowStorageAccess); |
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166 } |
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167 |
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168 if (expanded.type() == Json::objectValue) |
1354 | 169 { |
4554 | 170 answer.append(expanded); |
1354 | 171 } |
172 } | |
173 else | |
174 { | |
175 answer.append(*resource); | |
176 } | |
177 } | |
178 | |
179 output.AnswerJson(answer); | |
180 } | |
181 | |
182 | |
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183 static void AnswerListOfResources2(RestApiOutput& output, |
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184 ServerContext& context, |
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185 const std::list<std::string>& resources, |
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186 ResourceType level, |
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187 bool expand, |
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188 DicomToJsonFormat format, |
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189 const std::set<DicomTag>& requestedTags, |
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190 bool allowStorageAccess) |
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191 { |
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192 std::map<std::string, std::string> unusedInstancesIds; |
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193 std::map<std::string, boost::shared_ptr<DicomMap> > unusedResourcesMainDicomTags; |
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194 std::map<std::string, boost::shared_ptr<Json::Value> > unusedResourcesDicomAsJson; |
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195 |
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196 AnswerListOfResources1(output, context, resources, unusedInstancesIds, unusedResourcesMainDicomTags, unusedResourcesDicomAsJson, level, expand, format, requestedTags, allowStorageAccess); |
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197 } |
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198 |
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199 |
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200 template <enum ResourceType resourceType> |
974 | 201 static void ListResources(RestApiGetCall& call) |
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202 { |
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203 if (call.IsDocumentation()) |
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204 { |
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205 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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206 OrthancRestApi::DocumentRequestedTags(call); |
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207 |
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208 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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209 call.GetDocumentation() |
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210 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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211 .SetSummary("List the available " + resources) |
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212 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
4403 | 213 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
214 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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215 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
4403 | 216 "If present, retrieve detailed information about the individual " + resources, false) |
4404 | 217 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
218 "about the reported " + resources + " (if `expand` argument is provided)") | |
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219 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/" + resources + "?since=0&limit=2", true); |
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220 return; |
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221 } |
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222 |
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223 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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224 ServerContext& context = OrthancRestApi::GetContext(call); |
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225 |
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226 if (true) |
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227 { |
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228 /** |
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229 * EXPERIMENTAL VERSION |
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230 **/ |
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231 |
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232 const bool expand = (call.HasArgument("expand") && |
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233 call.GetBooleanArgument("expand", true)); |
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234 |
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235 FindRequest request(resourceType); |
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236 |
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237 #if 0 |
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238 // TODO - This version should be executed if no disk access is needed |
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239 if (expand) |
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240 { |
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241 request.SetResponseContent(FindRequest::ResponseContent_MainDicomTags | |
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242 FindRequest::ResponseContent_Metadata | |
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243 FindRequest::ResponseContent_Labels | |
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244 FindRequest::ResponseContent_Attachments | |
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245 FindRequest::ResponseContent_Parent | |
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246 FindRequest::ResponseContent_Children) |
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247 |
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248 request.SetRetrieveTagsAtLevel(resourceType, true); |
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249 |
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250 if (resourceType == ResourceType_Study) |
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251 { |
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252 request.SetRetrieveTagsAtLevel(ResourceType_Patient, true); |
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253 } |
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254 } |
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255 else |
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256 { |
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257 request.SetResponseContent(FindRequest::ResponseContent_IdentifiersOnly); |
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258 } |
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259 #else |
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260 request.SetResponseContent(FindRequest::ResponseContent_IdentifiersOnly); |
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261 #endif |
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262 |
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263 if (call.HasArgument("limit") || |
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264 call.HasArgument("since")) |
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265 { |
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266 if (!call.HasArgument("limit")) |
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267 { |
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268 throw OrthancException(ErrorCode_BadRequest, |
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269 "Missing \"limit\" argument for GET request against: " + |
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270 call.FlattenUri()); |
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271 } |
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272 |
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273 if (!call.HasArgument("since")) |
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274 { |
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275 throw OrthancException(ErrorCode_BadRequest, |
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276 "Missing \"since\" argument for GET request against: " + |
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277 call.FlattenUri()); |
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278 } |
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279 |
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280 uint64_t since = boost::lexical_cast<uint64_t>(call.GetArgument("since", "")); |
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281 uint64_t limit = boost::lexical_cast<uint64_t>(call.GetArgument("limit", "")); |
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282 request.SetLimits(since, limit); |
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283 } |
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284 |
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285 FindResponse response; |
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286 index.ExecuteFind(response, request); |
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287 |
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288 std::set<DicomTag> requestedTags; |
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289 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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290 |
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291 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
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292 |
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293 Json::Value answer = Json::arrayValue; |
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294 |
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295 for (size_t i = 0; i < response.GetSize(); i++) |
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296 { |
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297 std::string resourceId = response.GetItem(i).GetIdentifiers().GetLevel(resourceType); |
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298 |
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299 if (expand) |
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300 { |
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301 Json::Value expanded; |
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302 |
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303 context.ExpandResource(expanded, resourceId, resourceType, format, requestedTags, true /* allowStorageAccess */); |
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304 |
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305 if (expanded.type() == Json::objectValue) |
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306 { |
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307 answer.append(expanded); |
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308 } |
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309 else |
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310 { |
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311 throw OrthancException(ErrorCode_InternalError); |
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312 } |
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313 } |
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314 else |
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315 { |
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316 answer.append(resourceId); |
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317 } |
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318 } |
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319 |
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320 call.GetOutput().AnswerJson(answer); |
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321 } |
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322 else |
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323 { |
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324 /** |
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325 * VERSION IN ORTHANC <= 1.12.3 |
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326 **/ |
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327 |
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328 std::list<std::string> result; |
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329 |
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330 std::set<DicomTag> requestedTags; |
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331 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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332 |
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333 if (call.HasArgument("limit") || |
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334 call.HasArgument("since")) |
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335 { |
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336 if (!call.HasArgument("limit")) |
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337 { |
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338 throw OrthancException(ErrorCode_BadRequest, |
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339 "Missing \"limit\" argument for GET request against: " + |
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340 call.FlattenUri()); |
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341 } |
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342 |
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343 if (!call.HasArgument("since")) |
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344 { |
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345 throw OrthancException(ErrorCode_BadRequest, |
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346 "Missing \"since\" argument for GET request against: " + |
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347 call.FlattenUri()); |
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348 } |
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349 |
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350 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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351 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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352 index.GetAllUuids(result, resourceType, since, limit); |
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353 } |
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354 else |
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355 { |
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356 index.GetAllUuids(result, resourceType); |
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357 } |
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358 |
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359 AnswerListOfResources2(call.GetOutput(), context, result, resourceType, call.HasArgument("expand") && call.GetBooleanArgument("expand", true), |
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360 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), |
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361 requestedTags, |
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362 true /* allowStorageAccess */); |
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363 } |
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364 } |
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365 |
4409 | 366 |
367 | |
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368 template <enum ResourceType resourceType> |
974 | 369 static void GetSingleResource(RestApiGetCall& call) |
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370 { |
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371 if (call.IsDocumentation()) |
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372 { |
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373 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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374 OrthancRestApi::DocumentRequestedTags(call); |
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375 |
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376 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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377 call.GetDocumentation() |
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378 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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379 .SetSummary("Get information about some " + resource) |
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diff
changeset
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380 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
4404 | 381 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
4409 | 382 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
383 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
4399
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New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
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|
384 return; |
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New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
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diff
changeset
|
385 } |
4551
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
386 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
387 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
388 |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
389 std::set<DicomTag> requestedTags; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
390 OrthancRestApi::GetRequestedTags(requestedTags, call); |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
391 |
4554 | 392 Json::Value json; |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
393 if (OrthancRestApi::GetContext(call).ExpandResource( |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
394 json, call.GetUriComponent("id", ""), resourceType, format, requestedTags, true /* allowStorageAccess */)) |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
395 { |
4554 | 396 call.GetOutput().AnswerJson(json); |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
397 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
398 } |
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
399 |
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
400 template <enum ResourceType resourceType> |
974 | 401 static void DeleteSingleResource(RestApiDeleteCall& call) |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
402 { |
4399
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
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parents:
4330
diff
changeset
|
403 if (call.IsDocumentation()) |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
404 { |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
405 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
406 call.GetDocumentation() |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
407 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
408 .SetSummary("Delete some " + resource) |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
409 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
4404 | 410 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
4399
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
411 return; |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
412 } |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
413 |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
414 Json::Value remainingAncestor; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
415 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
416 { |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
417 call.GetOutput().AnswerJson(remainingAncestor); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
418 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
419 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
420 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
421 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
422 // Get information about a single patient ----------------------------------- |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
423 |
974 | 424 static void IsProtectedPatient(RestApiGetCall& call) |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
425 { |
4399
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
426 if (call.IsDocumentation()) |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
427 { |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
428 call.GetDocumentation() |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
429 .SetTag("Patients") |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
430 .SetSummary("Is the patient protected against recycling?") |
4404 | 431 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
4403 | 432 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
4399
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
433 return; |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
434 } |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
435 |
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
436 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
437 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
438 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
439 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
440 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
441 |
974 | 442 static void SetPatientProtection(RestApiPutCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
443 { |
4399
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
444 if (call.IsDocumentation()) |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
445 { |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
446 call.GetDocumentation() |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
447 .SetTag("Patients") |
5467
68e9f7815fb8
Clarified recycle/reject + protection
Alain Mazy <am@osimis.io>
parents:
5446
diff
changeset
|
448 .SetSummary("Protect/Unprotect a patient against recycling") |
68e9f7815fb8
Clarified recycle/reject + protection
Alain Mazy <am@osimis.io>
parents:
5446
diff
changeset
|
449 .SetDescription("Protects a patient by sending `1` or `true` in the payload request. " |
68e9f7815fb8
Clarified recycle/reject + protection
Alain Mazy <am@osimis.io>
parents:
5446
diff
changeset
|
450 "Unprotects a patient by sending `0` or `false` in the payload requests. " |
68e9f7815fb8
Clarified recycle/reject + protection
Alain Mazy <am@osimis.io>
parents:
5446
diff
changeset
|
451 "More info: https://orthanc.uclouvain.be/book/faq/features.html#recycling-protection") |
4404 | 452 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
4399
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
453 return; |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4330
diff
changeset
|
454 } |
80fd140b12ba
New command-line option: "--openapi" to write the OpenAPI documentation of the REST API to a file
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parents:
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diff
changeset
|
455 |
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
456 ServerContext& context = OrthancRestApi::GetContext(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
457 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
458 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
459 |
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4460
diff
changeset
|
460 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4460
diff
changeset
|
461 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
462 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
463 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
464 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
465 // Get information about a single instance ---------------------------------- |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
466 |
974 | 467 static void GetInstanceFile(RestApiGetCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
468 { |
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
469 static const char* const TRANSCODE = "transcode"; |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
470 |
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
471 if (call.IsDocumentation()) |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
472 { |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
473 call.GetDocumentation() |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
474 .SetTag("Instances") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
475 .SetSummary("Download DICOM") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
476 .SetDescription("Download one DICOM instance") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
477 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
478 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
479 .SetHttpGetArgument(TRANSCODE, RestApiCallDocumentation::Type_String, |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
480 "If present, the DICOM file will be transcoded to the provided " |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
481 "transfer syntax: https://orthanc.uclouvain.be/book/faq/transcoding.html", false) |
4405
5466f336b09f
gathering statistics about progress of api documentation
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parents:
4404
diff
changeset
|
482 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
483 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
5466f336b09f
gathering statistics about progress of api documentation
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parents:
4404
diff
changeset
|
484 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
485 return; |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
486 } |
5466f336b09f
gathering statistics about progress of api documentation
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parents:
4404
diff
changeset
|
487 |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
488 ServerContext& context = OrthancRestApi::GetContext(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
489 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
490 std::string publicId = call.GetUriComponent("id", ""); |
3203
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
491 |
4330
a01b1c9cbef4
moving generic type definitions from IHttpHandler to HttpToolbox
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4294
diff
changeset
|
492 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
3203
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
493 if (accept != call.GetHttpHeaders().end()) |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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3187
diff
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494 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
495 // New in Orthanc 1.5.4 |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
496 try |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
497 { |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
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3187
diff
changeset
|
498 MimeType mime = StringToMimeType(accept->second.c_str()); |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
499 |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
500 if (mime == MimeType_DicomWebJson || |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
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3187
diff
changeset
|
501 mime == MimeType_DicomWebXml) |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
502 { |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
503 DicomWebJsonVisitor visitor; |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
504 |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
505 { |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
506 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
507 locker.GetDicom().Apply(visitor); |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
508 } |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
509 |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
510 if (mime == MimeType_DicomWebJson) |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
511 { |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
512 std::string s = visitor.GetResult().toStyledString(); |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
513 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
514 } |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
515 else |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
516 { |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
517 std::string xml; |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
518 visitor.FormatXml(xml); |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
519 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
520 } |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
521 |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
522 return; |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
523 } |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
524 } |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
525 catch (OrthancException&) |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
526 { |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
527 } |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
528 } |
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3187
diff
changeset
|
529 |
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
530 if (call.HasArgument(TRANSCODE)) |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
531 { |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
532 std::string source; |
5427 | 533 std::string attachmentId; |
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
534 std::string transcoded; |
5427 | 535 context.ReadDicom(source, attachmentId, publicId); |
536 | |
537 if (context.TranscodeWithCache(transcoded, source, publicId, attachmentId, GetTransferSyntax(call.GetArgument(TRANSCODE, "")))) | |
5426
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
538 { |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
539 call.GetOutput().AnswerBuffer(transcoded, MimeType_Dicom); |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
540 } |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
541 } |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
542 else |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
543 { |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
544 // return the attachment without any transcoding |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
545 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
546 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
547 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
548 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
549 |
974 | 550 static void ExportInstanceFile(RestApiPostCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
551 { |
4421 | 552 if (call.IsDocumentation()) |
553 { | |
554 call.GetDocumentation() | |
555 .SetTag("Instances") | |
556 .SetSummary("Write DICOM onto filesystem") | |
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
557 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running. This is insecure for " |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
558 "Orthanc servers that are remotely accessible since one could overwrite any system file. " |
5275
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
559 "Since Orthanc 1.12.0, this route is disabled by default, but can be enabled using " |
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
560 "the `RestApiWriteToFileSystemEnabled` configuration option.") |
4421 | 561 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
562 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
563 return; | |
564 } | |
565 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
566 ServerContext& context = OrthancRestApi::GetContext(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
567 |
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
568 if (!context.IsRestApiWriteToFileSystemEnabled()) |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
569 { |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
570 LOG(ERROR) << "The URI /instances/../export is disallowed for security, " |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
571 << "check your configuration option `RestApiWriteToFileSystemEnabled`"; |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
572 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
573 return; |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
574 } |
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
5185
diff
changeset
|
575 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
576 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
577 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
578 std::string dicom; |
2124 | 579 context.ReadDicom(dicom, publicId); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
580 |
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
581 std::string target; |
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
582 call.BodyToString(target); |
2140 | 583 SystemToolbox::WriteFile(dicom, target); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
584 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
585 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
586 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
587 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
588 |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
589 template <DicomToJsonFormat format> |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
590 static void GetInstanceTagsInternal(RestApiGetCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
591 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
592 ServerContext& context = OrthancRestApi::GetContext(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
593 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
594 std::string publicId = call.GetUriComponent("id", ""); |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
595 |
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
596 std::set<DicomTag> ignoreTagLength; |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
597 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
598 |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
599 if (format != DicomToJsonFormat_Full || |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
600 !ignoreTagLength.empty()) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
601 { |
1146
200fcac0deb4
optimization for access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1145
diff
changeset
|
602 Json::Value full; |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
603 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
604 AnswerDicomAsJson(call, full, format); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
605 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
606 else |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
607 { |
3973
d86bddb50972
fix spelling errors according to debian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3928
diff
changeset
|
608 // This path allows one to avoid the JSON decoding if no |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
609 // simplification is asked, and if no "ignore-length" argument |
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
610 // is present |
4513
1f455b86b054
simplification in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4473
diff
changeset
|
611 Json::Value full; |
2127 | 612 context.ReadDicomAsJson(full, publicId); |
4513
1f455b86b054
simplification in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4473
diff
changeset
|
613 call.GetOutput().AnswerJson(full); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
614 } |
5197fd35333c
refactoring of OrthancRestApi
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615 } |
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refactoring of OrthancRestApi
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616 |
964
cc7a4ae474c1
simplify has a GET argument
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changeset
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617 |
4697
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618 static void GetInstanceTags(RestApiGetCall& call) |
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619 { |
4404 | 620 if (call.IsDocumentation()) |
621 { | |
4697
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changeset
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622 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
4404 | 623 call.GetDocumentation() |
624 .SetTag("Instances") | |
625 .SetSummary("Get DICOM tags") | |
626 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
627 "combines hexadecimal tags with human-readable description.") | |
628 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
4722
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629 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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changeset
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630 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
4404 | 631 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
5432
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diff
changeset
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632 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
4404 | 633 return; |
634 } | |
635 | |
4697
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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changeset
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636 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
964
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simplify has a GET argument
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diff
changeset
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637 { |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
638 case DicomToJsonFormat_Human: |
4697
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diff
changeset
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639 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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changeset
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640 break; |
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New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
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641 |
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New option "?short" to list DICOM tags using their hexadecimal ID
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changeset
|
642 case DicomToJsonFormat_Short: |
4697
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changeset
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643 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call); |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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changeset
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644 break; |
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New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
645 |
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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|
646 case DicomToJsonFormat_Full: |
4697
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changeset
|
647 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call); |
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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648 break; |
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New option "?short" to list DICOM tags using their hexadecimal ID
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changeset
|
649 |
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New option "?short" to list DICOM tags using their hexadecimal ID
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changeset
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650 default: |
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New option "?short" to list DICOM tags using their hexadecimal ID
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changeset
|
651 throw OrthancException(ErrorCode_InternalError); |
964
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diff
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652 } |
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diff
changeset
|
653 } |
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simplify has a GET argument
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parents:
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diff
changeset
|
654 |
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
655 |
4697
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656 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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657 { |
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diff
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658 if (call.IsDocumentation()) |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
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659 { |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
660 call.GetDocumentation() |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
661 .SetTag("Instances") |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
662 .SetSummary("Get human-readable tags") |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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changeset
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663 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
664 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
4722
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added missing documentation of "ignore-length" in "/instances/{id}/tags"
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diff
changeset
|
665 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
4697
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
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666 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
667 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
5432
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migration to UCLouvain servers
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parents:
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diff
changeset
|
668 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
4697
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
669 return; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
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diff
changeset
|
670 } |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
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diff
changeset
|
671 else |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
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diff
changeset
|
672 { |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
673 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
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diff
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|
674 } |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
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diff
changeset
|
675 } |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
676 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
677 |
974 | 678 static void ListFrames(RestApiGetCall& call) |
751
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refactoring of OrthancRestApi
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diff
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|
679 { |
4414 | 680 if (call.IsDocumentation()) |
681 { | |
682 call.GetDocumentation() | |
683 .SetTag("Instances") | |
684 .SetSummary("List available frames") | |
685 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
686 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
687 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
5432
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migration to UCLouvain servers
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parents:
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diff
changeset
|
688 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); |
4414 | 689 return; |
690 } | |
691 | |
1950
533ff46e944b
return a single raw frame from DICOM videos
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diff
changeset
|
692 std::string publicId = call.GetUriComponent("id", ""); |
751
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refactoring of OrthancRestApi
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changeset
|
693 |
1950
533ff46e944b
return a single raw frame from DICOM videos
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diff
changeset
|
694 unsigned int numberOfFrames; |
533ff46e944b
return a single raw frame from DICOM videos
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diff
changeset
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695 |
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return a single raw frame from DICOM videos
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parents:
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diff
changeset
|
696 { |
533ff46e944b
return a single raw frame from DICOM videos
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parents:
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diff
changeset
|
697 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
533ff46e944b
return a single raw frame from DICOM videos
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diff
changeset
|
698 numberOfFrames = locker.GetDicom().GetFramesCount(); |
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
699 } |
1950
533ff46e944b
return a single raw frame from DICOM videos
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parents:
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diff
changeset
|
700 |
533ff46e944b
return a single raw frame from DICOM videos
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parents:
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diff
changeset
|
701 Json::Value result = Json::arrayValue; |
533ff46e944b
return a single raw frame from DICOM videos
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parents:
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diff
changeset
|
702 for (unsigned int i = 0; i < numberOfFrames; i++) |
533ff46e944b
return a single raw frame from DICOM videos
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diff
changeset
|
703 { |
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return a single raw frame from DICOM videos
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parents:
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diff
changeset
|
704 result.append(i); |
533ff46e944b
return a single raw frame from DICOM videos
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diff
changeset
|
705 } |
533ff46e944b
return a single raw frame from DICOM videos
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
706 |
533ff46e944b
return a single raw frame from DICOM videos
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parents:
1929
diff
changeset
|
707 call.GetOutput().AnswerJson(result); |
751
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parents:
diff
changeset
|
708 } |
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
709 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
710 |
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
711 namespace |
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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1773
diff
changeset
|
712 { |
1784
2dbf25006f88
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diff
changeset
|
713 class ImageToEncode |
2dbf25006f88
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diff
changeset
|
714 { |
2dbf25006f88
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diff
changeset
|
715 private: |
3712
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changeset
|
716 std::unique_ptr<ImageAccessor>& image_; |
1902
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Refactoring leading to speedups with custom image decoders
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diff
changeset
|
717 ImageExtractionMode mode_; |
2281
e002430baa41
Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
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diff
changeset
|
718 bool invert_; |
2908
9d277f8ad698
new enumeration: MimeType
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diff
changeset
|
719 MimeType format_; |
1902
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Refactoring leading to speedups with custom image decoders
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diff
changeset
|
720 std::string answer_; |
1784
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changeset
|
721 |
2dbf25006f88
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diff
changeset
|
722 public: |
3712
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changeset
|
723 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
2281
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Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
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diff
changeset
|
724 ImageExtractionMode mode, |
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Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
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changeset
|
725 bool invert) : |
1902
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Refactoring leading to speedups with custom image decoders
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parents:
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diff
changeset
|
726 image_(image), |
2281
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Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
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diff
changeset
|
727 mode_(mode), |
4205 | 728 invert_(invert), |
729 format_(MimeType_Binary) | |
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
changeset
|
730 { |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
changeset
|
731 } |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
732 |
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
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parents:
1900
diff
changeset
|
733 void Answer(RestApiOutput& output) |
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
changeset
|
734 { |
1902
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Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
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735 output.AnswerBuffer(answer_, format_); |
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736 } |
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|
737 |
1902
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Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
738 void EncodeUsingPng() |
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739 { |
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740 format_ = MimeType_Png; |
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|
741 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
1784
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742 } |
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743 |
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744 void EncodeUsingPam() |
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745 { |
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746 format_ = MimeType_Pam; |
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747 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
52217dc47a4e
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748 } |
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749 |
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Refactoring leading to speedups with custom image decoders
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|
750 void EncodeUsingJpeg(uint8_t quality) |
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751 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
752 format_ = MimeType_Jpeg; |
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Fix issue #44 (Bad interpretation of photometric interpretation MONOCHROME1)
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changeset
|
753 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
1824
b530c3dfe2a6
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754 } |
1784
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|
755 }; |
1781
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756 |
1784
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|
757 class EncodePng : public HttpContentNegociation::IHandler |
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758 { |
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|
759 private: |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
760 ImageToEncode& image_; |
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changeset
|
761 |
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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changeset
|
762 public: |
4205 | 763 explicit EncodePng(ImageToEncode& image) : image_(image) |
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764 { |
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changeset
|
765 } |
1781
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|
766 |
1784
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767 virtual void Handle(const std::string& type, |
5338
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accept parameters are now provided to HttpContentNegociation::IHandler::Handle()
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768 const std::string& subtype, |
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|
769 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
1784
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770 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
771 assert(type == "image"); |
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|
772 assert(subtype == "png"); |
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
773 image_.EncodeUsingPng(); |
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|
774 } |
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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|
775 }; |
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
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|
776 |
2699
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am@osimis.io
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|
777 class EncodePam : public HttpContentNegociation::IHandler |
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
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|
778 { |
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
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diff
changeset
|
779 private: |
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
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diff
changeset
|
780 ImageToEncode& image_; |
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diff
changeset
|
781 |
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
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2622
diff
changeset
|
782 public: |
4205 | 783 explicit EncodePam(ImageToEncode& image) : image_(image) |
2699
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new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
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changeset
|
784 { |
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am@osimis.io
parents:
2622
diff
changeset
|
785 } |
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new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
parents:
2622
diff
changeset
|
786 |
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
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2622
diff
changeset
|
787 virtual void Handle(const std::string& type, |
5338
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
788 const std::string& subtype, |
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diff
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|
789 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
2699
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new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
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|
790 { |
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new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
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diff
changeset
|
791 assert(type == "image"); |
2780 | 792 assert(subtype == "x-portable-arbitrarymap"); |
2699
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new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
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|
793 image_.EncodeUsingPam(); |
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new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
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diff
changeset
|
794 } |
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
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diff
changeset
|
795 }; |
52217dc47a4e
new image/pam MIME TYPE supported in /instances/../frames/../image-uint8... routes
am@osimis.io
parents:
2622
diff
changeset
|
796 |
1784
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
797 class EncodeJpeg : public HttpContentNegociation::IHandler |
1781
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AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
798 { |
1784
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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|
799 private: |
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changeset
|
800 ImageToEncode& image_; |
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diff
changeset
|
801 unsigned int quality_; |
1781
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AcceptMediaDispatcher bootstrap
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parents:
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diff
changeset
|
802 |
1784
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
803 public: |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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|
804 EncodeJpeg(ImageToEncode& image, |
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|
805 const RestApiGetCall& call) : |
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|
806 image_(image) |
2dbf25006f88
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
807 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
808 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
2dbf25006f88
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diff
changeset
|
809 bool ok = false; |
1781
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AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
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|
810 |
1784
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changeset
|
811 try |
2dbf25006f88
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|
812 { |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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changeset
|
813 quality_ = boost::lexical_cast<unsigned int>(v); |
1847 | 814 ok = (quality_ >= 1 && quality_ <= 100); |
1784
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|
815 } |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
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|
816 catch (boost::bad_lexical_cast&) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
817 { |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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|
818 } |
2dbf25006f88
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|
819 |
2dbf25006f88
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|
820 if (!ok) |
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diff
changeset
|
821 { |
2955 | 822 throw OrthancException( |
823 ErrorCode_BadRequest, | |
824 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
1784
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|
825 } |
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|
826 } |
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|
827 |
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|
828 virtual void Handle(const std::string& type, |
5338
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accept parameters are now provided to HttpContentNegociation::IHandler::Handle()
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changeset
|
829 const std::string& subtype, |
78c59b02b121
accept parameters are now provided to HttpContentNegociation::IHandler::Handle()
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
830 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
1784
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|
831 { |
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|
832 assert(type == "image"); |
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changeset
|
833 assert(subtype == "jpeg"); |
1902
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Refactoring leading to speedups with custom image decoders
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diff
changeset
|
834 image_.EncodeUsingJpeg(quality_); |
1784
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changeset
|
835 } |
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diff
changeset
|
836 }; |
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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|
837 } |
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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changeset
|
838 |
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
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changeset
|
839 |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
840 namespace |
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
841 { |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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842 class IDecodedFrameHandler : public boost::noncopyable |
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|
843 { |
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parents:
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diff
changeset
|
844 public: |
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skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
845 virtual ~IDecodedFrameHandler() |
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diff
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846 { |
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diff
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|
847 } |
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skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
848 |
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
849 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
3683
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diff
changeset
|
850 virtual void Handle(RestApiGetCall& call, |
3712
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replacing std::auto_ptr by std::unique_ptr
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diff
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|
851 std::unique_ptr<ImageAccessor>& decoded, |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
852 const ParsedDicomFile* dicom, |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
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parents:
4769
diff
changeset
|
853 unsigned int frame) = 0; |
3683
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parents:
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diff
changeset
|
854 |
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parents:
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changeset
|
855 virtual bool RequiresDicomTags() const = 0; |
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skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
856 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
857 static void Apply(RestApiGetCall& call, |
4406
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|
858 IDecodedFrameHandler& handler, |
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|
859 ImageExtractionMode mode /* for generation of documentation */, |
4cb9f66a1c7c
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|
860 bool isRendered /* for generation of documentation */) |
3683
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diff
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|
861 { |
4406
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862 if (call.IsDocumentation()) |
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|
863 { |
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|
864 std::string m; |
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documenting generation of images
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diff
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|
865 if (!isRendered) |
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diff
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|
866 { |
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parents:
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diff
changeset
|
867 switch (mode) |
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diff
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|
868 { |
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parents:
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diff
changeset
|
869 case ImageExtractionMode_Preview: |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
870 m = "preview"; |
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|
871 break; |
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parents:
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diff
changeset
|
872 case ImageExtractionMode_UInt8: |
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parents:
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diff
changeset
|
873 m = "uint8"; |
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parents:
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diff
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|
874 break; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
875 case ImageExtractionMode_UInt16: |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
876 m = "uint16"; |
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documenting generation of images
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parents:
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diff
changeset
|
877 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
878 case ImageExtractionMode_Int16: |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
879 m = "int16"; |
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parents:
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diff
changeset
|
880 break; |
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parents:
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diff
changeset
|
881 default: |
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parents:
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diff
changeset
|
882 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
883 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
884 } |
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diff
changeset
|
885 |
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parents:
4405
diff
changeset
|
886 std::string description; |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
887 std::string verb = (isRendered ? "Render" : "Decode"); |
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parents:
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diff
changeset
|
888 |
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parents:
4405
diff
changeset
|
889 if (call.HasUriComponent("frame")) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
890 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
891 description = verb + " one frame of interest from the given DICOM instance."; |
4cb9f66a1c7c
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parents:
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diff
changeset
|
892 call.GetDocumentation() |
4cb9f66a1c7c
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parents:
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diff
changeset
|
893 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
894 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
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parents:
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diff
changeset
|
895 } |
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parents:
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diff
changeset
|
896 else |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
897 { |
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parents:
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diff
changeset
|
898 description = verb + " the first frame of the given DICOM instance."; |
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parents:
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diff
changeset
|
899 call.GetDocumentation() |
4cb9f66a1c7c
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parents:
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diff
changeset
|
900 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
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parents:
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diff
changeset
|
901 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
902 |
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parents:
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diff
changeset
|
903 if (isRendered) |
4cb9f66a1c7c
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parents:
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diff
changeset
|
904 { |
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
905 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
906 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
907 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
4cb9f66a1c7c
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parents:
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diff
changeset
|
908 call.GetDocumentation() |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
909 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
910 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
911 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
912 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
913 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
914 } |
4cb9f66a1c7c
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parents:
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diff
changeset
|
915 else |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
916 { |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
917 switch (mode) |
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
918 { |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
919 case ImageExtractionMode_Preview: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
920 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
921 break; |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
922 case ImageExtractionMode_UInt8: |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
923 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
924 break; |
4cb9f66a1c7c
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parents:
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diff
changeset
|
925 case ImageExtractionMode_UInt16: |
4cb9f66a1c7c
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parents:
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diff
changeset
|
926 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
927 break; |
4cb9f66a1c7c
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parents:
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diff
changeset
|
928 case ImageExtractionMode_Int16: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
929 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
930 "Negative values must be interpreted according to two's complement."); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
931 break; |
4cb9f66a1c7c
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parents:
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diff
changeset
|
932 default: |
4cb9f66a1c7c
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parents:
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diff
changeset
|
933 throw OrthancException(ErrorCode_ParameterOutOfRange); |
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
934 } |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
935 } |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
936 |
4cb9f66a1c7c
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diff
changeset
|
937 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
938 .SetTag("Instances") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
939 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
940 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
941 .SetHttpGetArgument("returnUnsupportedImage", RestApiCallDocumentation::Type_Boolean, "Returns an unsupported.png placeholder image if unable to provide the image instead of returning a 415 HTTP error (defaults to false)", false) |
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
942 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
943 .AddAnswerType(MimeType_Png, "PNG image") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
944 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
945 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
946 .SetDescription(description); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
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4405
diff
changeset
|
947 |
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
948 return; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
949 } |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
950 |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
951 ServerContext& context = OrthancRestApi::GetContext(call); |
12253ddefe5a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
952 |
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
953 std::string frameId = call.GetUriComponent("frame", "0"); |
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skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
954 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
955 unsigned int frame; |
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parents:
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diff
changeset
|
956 try |
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
957 { |
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
958 frame = boost::lexical_cast<unsigned int>(frameId); |
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
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|
959 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
960 catch (boost::bad_lexical_cast&) |
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parents:
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diff
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|
961 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
962 return; |
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parents:
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diff
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|
963 } |
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parents:
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diff
changeset
|
964 |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
965 std::unique_ptr<ImageAccessor> decoded; |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
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|
966 |
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diff
changeset
|
967 try |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
968 { |
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diff
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|
969 std::string publicId = call.GetUriComponent("id", ""); |
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
970 |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
971 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
3683
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|
972 |
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diff
changeset
|
973 if (decoded.get() == NULL) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
974 { |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
975 throw OrthancException(ErrorCode_NotImplemented, |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
976 "Cannot decode DICOM instance with ID: " + publicId); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
977 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
978 |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
979 if (handler.RequiresDicomTags()) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
980 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
981 /** |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
982 * Retrieve a summary of the DICOM tags, which is |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
983 * necessary to deal with MONOCHROME1 photometric |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
984 * interpretation, and with windowing parameters. |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
985 **/ |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
986 ServerContext::DicomCacheLocker locker(context, publicId); |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
987 handler.Handle(call, decoded, &locker.GetDicom(), frame); |
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
988 } |
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
989 else |
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
990 { |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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4769
diff
changeset
|
991 handler.Handle(call, decoded, NULL, frame); |
3683
12253ddefe5a
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diff
changeset
|
992 } |
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diff
changeset
|
993 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
994 catch (OrthancException& e) |
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
995 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
996 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
997 e.GetErrorCode() == ErrorCode_UnknownResource) |
12253ddefe5a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
998 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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3640
diff
changeset
|
999 // The frame number is out of the range for this DICOM |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1000 // instance, the resource is not existent |
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1001 } |
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1002 else |
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Sebastien Jodogne <s.jodogne@gmail.com>
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3640
diff
changeset
|
1003 { |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
1004 if (call.HasArgument("returnUnsupportedImage")) |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1005 { |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
1006 std::string root = ""; |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
1007 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
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4777
diff
changeset
|
1008 { |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
1009 root += "../"; |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
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parents:
4777
diff
changeset
|
1010 } |
ae643f664628
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diff
changeset
|
1011 |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
1012 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
3683
12253ddefe5a
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diff
changeset
|
1013 } |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
1014 else |
ae643f664628
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Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
1015 { |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
1016 call.GetOutput().SignalError(HttpStatus_415_UnsupportedMediaType); |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
1017 } |
3683
12253ddefe5a
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diff
changeset
|
1018 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1019 return; |
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parents:
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diff
changeset
|
1020 } |
12253ddefe5a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1021 |
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diff
changeset
|
1022 } |
3685
2cc34837d694
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3683
diff
changeset
|
1023 |
2cc34837d694
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3683
diff
changeset
|
1024 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1025 static void DefaultHandler(RestApiGetCall& call, |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
1026 std::unique_ptr<ImageAccessor>& decoded, |
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1027 ImageExtractionMode mode, |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1028 bool invert) |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1029 { |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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3683
diff
changeset
|
1030 ImageToEncode image(decoded, mode, invert); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1031 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1032 HttpContentNegociation negociation; |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1033 EncodePng png(image); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1034 negociation.Register(MIME_PNG, png); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1035 |
2cc34837d694
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parents:
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diff
changeset
|
1036 EncodeJpeg jpeg(image, call); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1037 negociation.Register(MIME_JPEG, jpeg); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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3683
diff
changeset
|
1038 |
2cc34837d694
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parents:
3683
diff
changeset
|
1039 EncodePam pam(image); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1040 negociation.Register(MIME_PAM, pam); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1041 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1042 if (negociation.Apply(call.GetHttpHeaders())) |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1043 { |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
1044 image.Answer(call.GetOutput()); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1045 } |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
1046 } |
3683
12253ddefe5a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1047 }; |
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
1048 |
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
1049 |
3683
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skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
1050 class GetImageHandler : public IDecodedFrameHandler |
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diff
changeset
|
1051 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1052 private: |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1053 ImageExtractionMode mode_; |
12253ddefe5a
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diff
changeset
|
1054 |
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skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1055 public: |
4205 | 1056 explicit GetImageHandler(ImageExtractionMode mode) : |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
1057 mode_(mode) |
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diff
changeset
|
1058 { |
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diff
changeset
|
1059 } |
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diff
changeset
|
1060 |
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parents:
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diff
changeset
|
1061 virtual void Handle(RestApiGetCall& call, |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
1062 std::unique_ptr<ImageAccessor>& decoded, |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
1063 const ParsedDicomFile* dicom, |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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4769
diff
changeset
|
1064 unsigned int frame) ORTHANC_OVERRIDE |
3683
12253ddefe5a
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1065 { |
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1066 bool invert = false; |
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1067 |
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1068 if (mode_ == ImageExtractionMode_Preview) |
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1069 { |
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1070 if (dicom == NULL) |
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1071 { |
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|
1072 throw OrthancException(ErrorCode_InternalError); |
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1073 } |
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|
1074 |
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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1075 DicomMap tags; |
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|
1076 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
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|
1077 |
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diff
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|
1078 DicomImageInformation info(tags); |
3683
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1079 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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1080 } |
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1081 |
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1082 DefaultHandler(call, decoded, mode_, invert); |
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1083 } |
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1084 |
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1085 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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1086 { |
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1087 return mode_ == ImageExtractionMode_Preview; |
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1088 } |
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1089 }; |
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1090 |
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|
1091 |
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1092 class RenderedFrameHandler : public IDecodedFrameHandler |
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1093 { |
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1094 private: |
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1095 static void GetUserArguments(double& windowWidth /* inout */, |
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1096 double& windowCenter /* inout */, |
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1097 unsigned int& argWidth, |
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1098 unsigned int& argHeight, |
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1099 bool& smooth, |
4205 | 1100 const RestApiGetCall& call) |
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1101 { |
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1102 static const char* ARG_WINDOW_CENTER = "window-center"; |
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1103 static const char* ARG_WINDOW_WIDTH = "window-width"; |
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1104 static const char* ARG_WIDTH = "width"; |
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1105 static const char* ARG_HEIGHT = "height"; |
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|
1106 static const char* ARG_SMOOTH = "smooth"; |
3600
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|
1107 |
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|
1108 if (call.HasArgument(ARG_WINDOW_WIDTH) && |
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|
1109 !SerializationToolbox::ParseDouble(windowWidth, call.GetArgument(ARG_WINDOW_WIDTH, ""))) |
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1110 { |
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|
1111 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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|
1112 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
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1113 } |
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1114 |
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|
1115 if (call.HasArgument(ARG_WINDOW_CENTER) && |
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changeset
|
1116 !SerializationToolbox::ParseDouble(windowCenter, call.GetArgument(ARG_WINDOW_CENTER, ""))) |
3683
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|
1117 { |
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|
1118 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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|
1119 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
3685
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1120 } |
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1121 |
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1122 argWidth = 0; |
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|
1123 argHeight = 0; |
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1124 |
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|
1125 if (call.HasArgument(ARG_WIDTH)) |
3685
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|
1126 { |
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|
1127 try |
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rendering of RGB24
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|
1128 { |
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changeset
|
1129 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
3685
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|
1130 if (tmp < 0) |
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|
1131 { |
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1132 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3690
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diff
changeset
|
1133 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
3685
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1134 } |
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1135 else |
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|
1136 { |
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|
1137 argWidth = static_cast<unsigned int>(tmp); |
3685
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|
1138 } |
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|
1139 } |
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|
1140 catch (boost::bad_lexical_cast&) |
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|
1141 { |
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|
1142 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3690
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changeset
|
1143 "Bad value for argument: " + std::string(ARG_WIDTH)); |
3685
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diff
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1144 } |
3683
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1145 } |
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diff
changeset
|
1146 |
3690
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1147 if (call.HasArgument(ARG_HEIGHT)) |
3685
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|
1148 { |
2cc34837d694
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changeset
|
1149 try |
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rendering of RGB24
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changeset
|
1150 { |
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changeset
|
1151 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
3685
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rendering of RGB24
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diff
changeset
|
1152 if (tmp < 0) |
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diff
changeset
|
1153 { |
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diff
changeset
|
1154 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3690
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
1155 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
3685
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diff
changeset
|
1156 } |
2cc34837d694
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diff
changeset
|
1157 else |
2cc34837d694
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diff
changeset
|
1158 { |
3690
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changeset
|
1159 argHeight = static_cast<unsigned int>(tmp); |
3685
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diff
changeset
|
1160 } |
2cc34837d694
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diff
changeset
|
1161 } |
2cc34837d694
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changeset
|
1162 catch (boost::bad_lexical_cast&) |
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diff
changeset
|
1163 { |
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diff
changeset
|
1164 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3690
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changeset
|
1165 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
3685
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diff
changeset
|
1166 } |
2cc34837d694
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diff
changeset
|
1167 } |
2cc34837d694
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changeset
|
1168 |
3690
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changeset
|
1169 smooth = false; |
3685
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diff
changeset
|
1170 |
2cc34837d694
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changeset
|
1171 if (call.HasArgument(ARG_SMOOTH)) |
2cc34837d694
rendering of RGB24
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diff
changeset
|
1172 { |
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
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4460
diff
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|
1173 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
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1174 } |
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1175 } |
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1176 |
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1177 |
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1178 public: |
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1179 virtual void Handle(RestApiGetCall& call, |
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1180 std::unique_ptr<ImageAccessor>& decoded, |
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1181 const ParsedDicomFile* dicom, |
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1182 unsigned int frame) ORTHANC_OVERRIDE |
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1183 { |
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1184 if (dicom == NULL) |
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1185 { |
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1186 throw OrthancException(ErrorCode_InternalError); |
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1187 } |
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1188 |
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1189 PhotometricInterpretation photometric; |
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1190 const bool invert = (dicom->LookupPhotometricInterpretation(photometric) && |
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1191 photometric == PhotometricInterpretation_Monochrome1); |
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1192 |
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1193 double rescaleIntercept, rescaleSlope, windowCenter, windowWidth; |
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1194 dicom->GetRescale(rescaleIntercept, rescaleSlope, frame); |
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1195 dicom->GetDefaultWindowing(windowCenter, windowWidth, frame); |
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1196 |
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1197 unsigned int argWidth, argHeight; |
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1198 bool smooth; |
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1199 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
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1200 |
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1201 unsigned int targetWidth = decoded->GetWidth(); |
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1202 unsigned int targetHeight = decoded->GetHeight(); |
3686 | 1203 |
1204 if (decoded->GetWidth() != 0 && | |
1205 decoded->GetHeight() != 0) | |
1206 { | |
1207 float ratio = 1; | |
1208 | |
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1209 if (argWidth != 0 && |
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1210 argHeight != 0) |
3686 | 1211 { |
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1212 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
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1213 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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1214 ratio = std::min(ratioX, ratioY); |
3686 | 1215 } |
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1216 else if (argWidth != 0) |
3686 | 1217 { |
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1218 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
3686 | 1219 } |
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1220 else if (argHeight != 0) |
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1221 { |
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1222 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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1223 } |
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1224 |
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1225 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
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1226 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
3686 | 1227 } |
1228 | |
5054
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Alain Mazy <am@osimis.io>
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1229 if (decoded->GetFormat() == PixelFormat_RGB24 || decoded->GetFormat() == PixelFormat_RGB48) |
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1230 { |
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1231 if (targetWidth == decoded->GetWidth() && |
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1232 targetHeight == decoded->GetHeight()) |
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1233 { |
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1234 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
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1235 } |
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1236 else |
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1237 { |
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1238 std::unique_ptr<ImageAccessor> resized( |
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1239 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
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1240 |
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1241 if (smooth && |
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1242 (targetWidth < decoded->GetWidth() || |
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1243 targetHeight < decoded->GetHeight())) |
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1244 { |
4065
d6362b2c4b61
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4055
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|
1245 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
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1246 } |
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1247 |
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1248 ImageProcessing::Resize(*resized, *decoded); |
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1249 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
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1250 } |
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1251 } |
3686 | 1252 else |
1253 { | |
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1254 // Grayscale image: (1) convert to Float32, (2) apply |
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1255 // windowing to get a Grayscale8, (3) possibly resize |
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1256 |
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1257 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
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1258 ImageProcessing::Convert(converted, *decoded); |
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1259 |
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1260 // Avoid divisions by zero |
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1261 if (windowWidth <= 1.0f) |
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1262 { |
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1263 windowWidth = 1; |
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1264 } |
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1265 |
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1266 if (std::abs(rescaleSlope) <= 0.0001) |
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1267 { |
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1268 rescaleSlope = 0.0001; |
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1269 } |
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1270 |
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1271 const double scaling = 255.0 * rescaleSlope / windowWidth; |
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1272 const double offset = (rescaleIntercept - windowCenter + windowWidth / 2.0) / rescaleSlope; |
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1273 |
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1274 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
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1275 ImageProcessing::ShiftScale(*rescaled, converted, static_cast<float>(offset), static_cast<float>(scaling), false); |
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1276 |
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1277 if (targetWidth == decoded->GetWidth() && |
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1278 targetHeight == decoded->GetHeight()) |
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1279 { |
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1280 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
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1281 } |
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1282 else |
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1283 { |
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1284 std::unique_ptr<ImageAccessor> resized( |
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1285 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
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1286 |
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1287 if (smooth && |
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1288 (targetWidth < decoded->GetWidth() || |
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1289 targetHeight < decoded->GetHeight())) |
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1290 { |
4065
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1291 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
3690
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1292 } |
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1293 |
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1294 ImageProcessing::Resize(*resized, *rescaled); |
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1295 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
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1296 } |
3686 | 1297 } |
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1298 } |
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1299 |
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1300 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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1301 { |
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1302 return true; |
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1303 } |
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1304 }; |
3600
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1305 } |
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1306 |
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1307 |
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1308 template <enum ImageExtractionMode mode> |
974 | 1309 static void GetImage(RestApiGetCall& call) |
751
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1310 { |
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1311 Semaphore::Locker locker(throttlingSemaphore_); |
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1312 |
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1313 GetImageHandler handler(mode); |
4406
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1314 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
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1315 } |
1906
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1316 |
1826
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1317 |
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1318 static void GetRenderedFrame(RestApiGetCall& call) |
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1319 { |
3926
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1320 Semaphore::Locker locker(throttlingSemaphore_); |
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1321 |
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1322 RenderedFrameHandler handler; |
4406
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1323 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
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1324 } |
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1325 |
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1326 |
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1327 static void DocumentSharedNumpy(RestApiGetCall& call) |
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1328 { |
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1329 call.GetDocumentation() |
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1330 .SetUriArgument("id", "Orthanc identifier of the DICOM resource of interest") |
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1331 .SetHttpGetArgument("compress", RestApiCallDocumentation::Type_Boolean, "Compress the file as `.npz`", false) |
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1332 .SetHttpGetArgument("rescale", RestApiCallDocumentation::Type_Boolean, |
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1333 "On grayscale images, apply the rescaling and return floating-point values", false) |
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1334 .AddAnswerType(MimeType_PlainText, "Numpy file: https://numpy.org/devdocs/reference/generated/numpy.lib.format.html"); |
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1335 } |
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1336 |
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1337 |
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1338 namespace |
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1339 { |
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1340 class NumpyVisitor : public boost::noncopyable |
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1341 { |
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1342 private: |
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1343 bool rescale_; |
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1344 unsigned int depth_; |
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1345 unsigned int currentDepth_; |
4858 | 1346 unsigned int width_; |
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1347 unsigned int height_; |
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1348 PixelFormat format_; |
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1349 ChunkedBuffer buffer_; |
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1350 |
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1351 public: |
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1352 NumpyVisitor(unsigned int depth /* can be zero if 2D frame */, |
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1353 bool rescale) : |
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1354 rescale_(rescale), |
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1355 depth_(depth), |
4858 | 1356 currentDepth_(0), |
1357 width_(0), // dummy initialization | |
1358 height_(0), // dummy initialization | |
1359 format_(PixelFormat_Grayscale8) // dummy initialization | |
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1360 { |
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1361 } |
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1362 |
4858 | 1363 void WriteFrame(const ParsedDicomFile& dicom, |
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1364 unsigned int frame) |
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1365 { |
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1366 std::unique_ptr<ImageAccessor> decoded(dicom.DecodeFrame(frame)); |
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1367 |
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1368 if (decoded.get() == NULL) |
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1369 { |
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1370 throw OrthancException(ErrorCode_NotImplemented, "Cannot decode DICOM instance"); |
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1371 } |
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1372 |
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1373 if (currentDepth_ == 0) |
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1374 { |
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1375 width_ = decoded->GetWidth(); |
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1376 height_ = decoded->GetHeight(); |
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1377 format_ = decoded->GetFormat(); |
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1378 } |
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1379 else if (width_ != decoded->GetWidth() || |
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1380 height_ != decoded->GetHeight()) |
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1381 { |
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1382 throw OrthancException(ErrorCode_IncompatibleImageSize, "The size of the frames varies across the instance(s)"); |
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1383 } |
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1384 else if (format_ != decoded->GetFormat()) |
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1385 { |
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1386 throw OrthancException(ErrorCode_IncompatibleImageFormat, "The pixel format of the frames varies across the instance(s)"); |
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1387 } |
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1388 |
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1389 if (rescale_ && |
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1390 decoded->GetFormat() != PixelFormat_RGB24) |
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1391 { |
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1392 if (currentDepth_ == 0) |
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1393 { |
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1394 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, PixelFormat_Float32); |
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1395 } |
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1396 |
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1397 double rescaleIntercept, rescaleSlope; |
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1398 dicom.GetRescale(rescaleIntercept, rescaleSlope, frame); |
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1399 |
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1400 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
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1401 ImageProcessing::Convert(converted, *decoded); |
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1402 ImageProcessing::ShiftScale2(converted, static_cast<float>(rescaleIntercept), static_cast<float>(rescaleSlope), false); |
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1403 |
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1404 NumpyWriter::WritePixels(buffer_, converted); |
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1405 } |
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download of numpy arrays from the REST API
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1406 else |
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|
1407 { |
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1408 if (currentDepth_ == 0) |
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1409 { |
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1410 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, format_); |
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1411 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1412 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1413 NumpyWriter::WritePixels(buffer_, *decoded); |
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|
1414 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1415 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1416 currentDepth_ ++; |
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1417 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1418 |
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|
1419 void Answer(RestApiOutput& output, |
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|
1420 bool compress) |
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1421 { |
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1422 if ((depth_ == 0 && currentDepth_ != 1) || |
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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1423 (depth_ != 0 && currentDepth_ != depth_)) |
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|
1424 { |
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1425 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
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1426 } |
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|
1427 else |
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|
1428 { |
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1429 std::string answer; |
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|
1430 NumpyWriter::Finalize(answer, buffer_, compress); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1431 output.AnswerBuffer(answer, MimeType_Binary); |
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1432 } |
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|
1433 } |
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|
1434 }; |
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1435 } |
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|
1436 |
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|
1437 |
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1438 static void GetNumpyFrame(RestApiGetCall& call) |
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1439 { |
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1440 if (call.IsDocumentation()) |
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|
1441 { |
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|
1442 DocumentSharedNumpy(call); |
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|
1443 call.GetDocumentation() |
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1444 .SetTag("Instances") |
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1445 .SetSummary("Decode frame for numpy") |
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1446 .SetDescription("Decode one frame of interest from the given DICOM instance, for use with numpy in Python. " |
ec1e9571b645
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|
1447 "The numpy array has 3 dimensions: (height, width, color channel).") |
4834
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1448 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
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|
1449 } |
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|
1450 else |
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|
1451 { |
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|
1452 const std::string instanceId = call.GetUriComponent("id", ""); |
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1453 const bool compress = call.GetBooleanArgument("compress", false); |
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|
1454 const bool rescale = call.GetBooleanArgument("rescale", true); |
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|
1455 |
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|
1456 uint32_t frame; |
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|
1457 if (!SerializationToolbox::ParseUnsignedInteger32(frame, call.GetUriComponent("frame", "0"))) |
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|
1458 { |
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|
1459 throw OrthancException(ErrorCode_ParameterOutOfRange, "Expected an unsigned integer for the \"frame\" argument"); |
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|
1460 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1461 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1462 NumpyVisitor visitor(0 /* no depth, 2D frame */, rescale); |
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|
1463 |
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|
1464 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1465 Semaphore::Locker throttling(throttlingSemaphore_); |
bec432ee1094
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|
1466 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
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|
1467 |
bec432ee1094
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|
1468 visitor.WriteFrame(locker.GetDicom(), frame); |
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|
1469 } |
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changeset
|
1470 |
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|
1471 visitor.Answer(call.GetOutput(), compress); |
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1472 } |
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1473 } |
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changeset
|
1474 |
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|
1475 |
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|
1476 static void GetNumpyInstance(RestApiGetCall& call) |
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1477 { |
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|
1478 if (call.IsDocumentation()) |
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1479 { |
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|
1480 DocumentSharedNumpy(call); |
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|
1481 call.GetDocumentation() |
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1482 .SetTag("Instances") |
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1483 .SetSummary("Decode instance for numpy") |
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1484 .SetDescription("Decode the given DICOM instance, for use with numpy in Python. " |
ec1e9571b645
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|
1485 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
4834
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1486 } |
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|
1487 else |
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|
1488 { |
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changeset
|
1489 const std::string instanceId = call.GetUriComponent("id", ""); |
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|
1490 const bool compress = call.GetBooleanArgument("compress", false); |
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1491 const bool rescale = call.GetBooleanArgument("rescale", true); |
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|
1492 |
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|
1493 { |
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|
1494 Semaphore::Locker throttling(throttlingSemaphore_); |
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|
1495 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
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|
1496 |
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|
1497 const unsigned int depth = locker.GetDicom().GetFramesCount(); |
bec432ee1094
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1498 if (depth == 0) |
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1499 { |
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|
1500 throw OrthancException(ErrorCode_BadFileFormat, "Empty DICOM instance"); |
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1501 } |
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|
1502 |
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|
1503 NumpyVisitor visitor(depth, rescale); |
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|
1504 |
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|
1505 for (unsigned int frame = 0; frame < depth; frame++) |
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1506 { |
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|
1507 visitor.WriteFrame(locker.GetDicom(), frame); |
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|
1508 } |
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changeset
|
1509 |
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changeset
|
1510 visitor.Answer(call.GetOutput(), compress); |
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1511 } |
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1512 } |
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|
1513 } |
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changeset
|
1514 |
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|
1515 |
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|
1516 static void GetNumpySeries(RestApiGetCall& call) |
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1517 { |
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|
1518 if (call.IsDocumentation()) |
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|
1519 { |
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|
1520 DocumentSharedNumpy(call); |
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|
1521 call.GetDocumentation() |
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|
1522 .SetTag("Series") |
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|
1523 .SetSummary("Decode series for numpy") |
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|
1524 .SetDescription("Decode the given DICOM series, for use with numpy in Python. " |
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1525 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
4834
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1526 } |
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1527 else |
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1528 { |
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1529 const std::string seriesId = call.GetUriComponent("id", ""); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1530 const bool compress = call.GetBooleanArgument("compress", false); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1531 const bool rescale = call.GetBooleanArgument("rescale", true); |
bec432ee1094
download of numpy arrays from the REST API
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|
1532 |
bec432ee1094
download of numpy arrays from the REST API
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changeset
|
1533 Semaphore::Locker throttling(throttlingSemaphore_); |
bec432ee1094
download of numpy arrays from the REST API
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diff
changeset
|
1534 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1535 ServerIndex& index = OrthancRestApi::GetIndex(call); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1536 SliceOrdering ordering(index, seriesId); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1537 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
1538 unsigned int depth = 0; |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1539 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1540 { |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1541 depth += ordering.GetFramesCount(i); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1542 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1543 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1544 ServerContext& context = OrthancRestApi::GetContext(call); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1545 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1546 NumpyVisitor visitor(depth, rescale); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1547 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1548 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1549 { |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1550 const std::string& instanceId = ordering.GetInstanceId(i); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1551 unsigned int framesCount = ordering.GetFramesCount(i); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1552 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1553 { |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1554 ServerContext::DicomCacheLocker locker(context, instanceId); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1555 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1556 for (unsigned int frame = 0; frame < framesCount; frame++) |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1557 { |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1558 visitor.WriteFrame(locker.GetDicom(), frame); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1559 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1560 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1561 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1562 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1563 visitor.Answer(call.GetOutput(), compress); |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1564 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1565 } |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1566 |
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1567 |
974 | 1568 static void GetMatlabImage(RestApiGetCall& call) |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1569 { |
4414 | 1570 if (call.IsDocumentation()) |
1571 { | |
1572 std::string description; | |
1573 | |
1574 if (call.HasUriComponent("frame")) | |
1575 { | |
1576 description = "Decode one frame of interest from the given DICOM instance"; | |
1577 call.GetDocumentation() | |
1578 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
1579 } | |
1580 else | |
1581 { | |
1582 description = "Decode the first frame of the given DICOM instance."; | |
1583 } | |
1584 | |
1585 call.GetDocumentation() | |
1586 .SetTag("Instances") | |
1587 .SetSummary("Decode frame for Matlab") | |
1588 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1589 "https://orthanc.uclouvain.be/book/faq/matlab.html") |
4414 | 1590 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
1591 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
1592 return; | |
1593 } | |
1594 | |
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3816
diff
changeset
|
1595 Semaphore::Locker locker(throttlingSemaphore_); |
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1596 |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1597 ServerContext& context = OrthancRestApi::GetContext(call); |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1598 |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1599 std::string frameId = call.GetUriComponent("frame", "0"); |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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831
diff
changeset
|
1600 |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1601 unsigned int frame; |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1602 try |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1603 { |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1604 frame = boost::lexical_cast<unsigned int>(frameId); |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1605 } |
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2804
diff
changeset
|
1606 catch (boost::bad_lexical_cast&) |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1607 { |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1608 return; |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1609 } |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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831
diff
changeset
|
1610 |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1611 std::string publicId = call.GetUriComponent("id", ""); |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1612 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
874
87791ebc1f50
download matlab images
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diff
changeset
|
1613 |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1614 if (decoded.get() == NULL) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1615 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1616 throw OrthancException(ErrorCode_NotImplemented, |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1617 "Cannot decode DICOM instance with ID: " + publicId); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1618 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1619 else |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1620 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1621 std::string result; |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1622 decoded->ToMatlabString(result); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1623 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1624 } |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1625 } |
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1626 |
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1627 |
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1628 template <bool GzipCompression> |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1629 static void GetRawFrame(RestApiGetCall& call) |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1630 { |
4408 | 1631 if (call.IsDocumentation()) |
1632 { | |
1633 call.GetDocumentation() | |
1634 .SetTag("Instances") | |
1635 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
1636 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
1637 "bypassing image decoding. This is notably useful to access the source files " | |
1638 "in compressed transfer syntaxes." + | |
1639 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1640 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
4408 | 1641 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
1642 | |
1643 if (GzipCompression) | |
1644 { | |
1645 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
1646 } | |
1647 else | |
1648 { | |
1649 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
1650 } | |
1651 return; | |
1652 } | |
1653 | |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1654 std::string frameId = call.GetUriComponent("frame", "0"); |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1906
diff
changeset
|
1655 |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1656 unsigned int frame; |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1657 try |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1658 { |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1659 frame = boost::lexical_cast<unsigned int>(frameId); |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1660 } |
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2804
diff
changeset
|
1661 catch (boost::bad_lexical_cast&) |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1662 { |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1663 return; |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1664 } |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1665 |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1666 std::string publicId = call.GetUriComponent("id", ""); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
1667 std::string raw; |
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
1668 MimeType mime; |
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1669 |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1670 { |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1671 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1672 locker.GetDicom().GetRawFrame(raw, mime, frame); |
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1673 } |
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1674 |
2408
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|
1675 if (GzipCompression) |
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1676 { |
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|
1677 GzipCompressor gzip; |
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|
1678 std::string compressed; |
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|
1679 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
2908
9d277f8ad698
new enumeration: MimeType
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1680 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
2408
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1681 } |
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1682 else |
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1683 { |
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|
1684 call.GetOutput().AnswerBuffer(raw, mime); |
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|
1685 } |
1924
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|
1686 } |
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1687 |
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|
1688 |
974 | 1689 static void GetResourceStatistics(RestApiGetCall& call) |
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1690 { |
4418 | 1691 if (call.IsDocumentation()) |
1692 { | |
1693 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1694 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1695 call.GetDocumentation() | |
1696 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1697 .SetSummary("Get " + r + " statistics") | |
1698 .SetDescription("Get statistics about the given " + r) | |
1699 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1700 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
1701 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
1702 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
1703 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
1704 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
1705 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
1706 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
1707 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
1708 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
1709 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
1710 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
1711 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
1712 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
1713 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
1714 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
1715 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
1716 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
1717 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
1718 | |
1719 switch (t) | |
1720 { | |
1721 // Do NOT add "break" below this point! | |
1722 case ResourceType_Patient: | |
1723 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
1724 "Number of child studies within this " + r); | |
1725 | |
1726 case ResourceType_Study: | |
1727 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
1728 "Number of child series within this " + r); | |
1729 | |
1730 case ResourceType_Series: | |
1731 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
1732 "Number of child instances within this " + r); | |
1733 | |
1734 case ResourceType_Instance: | |
1735 default: | |
1736 break; | |
1737 } | |
1738 | |
1739 return; | |
1740 } | |
1741 | |
3174
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1742 static const uint64_t MEGA_BYTES = 1024 * 1024; |
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1743 |
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1744 std::string publicId = call.GetUriComponent("id", ""); |
3174
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1745 |
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1746 ResourceType type; |
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1747 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
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1748 unsigned int countStudies, countSeries, countInstances; |
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1749 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
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1750 type, diskSize, uncompressedSize, countStudies, countSeries, |
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1751 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
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1752 |
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1753 Json::Value result = Json::objectValue; |
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1754 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1755 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1756 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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1757 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
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1758 |
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1759 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
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1760 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1761 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
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1762 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
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1763 |
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1764 switch (type) |
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1765 { |
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1766 // Do NOT add "break" below this point! |
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1767 case ResourceType_Patient: |
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1768 result["CountStudies"] = countStudies; |
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1769 |
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1770 case ResourceType_Study: |
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1771 result["CountSeries"] = countSeries; |
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1772 |
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1773 case ResourceType_Series: |
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1774 result["CountInstances"] = countInstances; |
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1775 |
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1776 case ResourceType_Instance: |
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1777 default: |
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1778 break; |
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1779 } |
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1780 |
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1781 call.GetOutput().AnswerJson(result); |
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1782 } |
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1783 |
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1784 |
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1785 |
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1786 // Handling of metadata ----------------------------------------------------- |
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1787 |
4205 | 1788 static void CheckValidResourceType(const RestApiCall& call) |
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1789 { |
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1790 assert(!call.GetFullUri().empty()); |
4409 | 1791 const std::string resourceType = call.GetFullUri() [0]; |
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1792 StringToResourceType(resourceType.c_str()); |
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1793 } |
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1794 |
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1795 |
974 | 1796 static void ListMetadata(RestApiGetCall& call) |
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1797 { |
4414 | 1798 if (call.IsDocumentation()) |
1799 { | |
1800 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1801 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1802 call.GetDocumentation() | |
1803 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1804 .SetSummary("List metadata") | |
1805 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
1806 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1807 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
1808 "If present, also retrieve the value of the individual metadata", false) | |
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1809 .SetHttpGetArgument("numeric", RestApiCallDocumentation::Type_String, |
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1810 "If present, use the numeric identifier of the metadata instead of its symbolic name", false) |
4414 | 1811 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " |
1812 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
1813 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
1814 return; | |
1815 } | |
1816 | |
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1817 assert(!call.GetFullUri().empty()); |
4554 | 1818 const std::string publicId = call.GetUriComponent("id", ""); |
1819 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
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1820 |
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1821 typedef std::map<MetadataType, std::string> Metadata; |
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1822 |
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1823 Metadata metadata; |
4554 | 1824 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
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1825 |
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1826 Json::Value result; |
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1827 |
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1828 bool isNumeric = call.HasArgument("numeric"); |
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1829 |
5405
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1830 if (call.HasArgument("expand") && call.GetBooleanArgument("expand", true)) |
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1831 { |
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1832 result = Json::objectValue; |
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1833 |
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1834 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
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|
1835 { |
5274
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Added option "?numeric" if listing metadata
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|
1836 std::string key; |
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Added option "?numeric" if listing metadata
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diff
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|
1837 if (isNumeric) |
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Added option "?numeric" if listing metadata
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|
1838 { |
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Added option "?numeric" if listing metadata
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diff
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|
1839 key = boost::lexical_cast<std::string>(it->first); |
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Added option "?numeric" if listing metadata
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|
1840 } |
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Added option "?numeric" if listing metadata
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|
1841 else |
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Added option "?numeric" if listing metadata
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|
1842 { |
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Added option "?numeric" if listing metadata
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diff
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|
1843 key = EnumerationToString(it->first); |
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Added option "?numeric" if listing metadata
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|
1844 } |
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Added option "?numeric" if listing metadata
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|
1845 |
3187
4bbadcd03966
refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
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3174
diff
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|
1846 result[key] = it->second; |
5274
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Added option "?numeric" if listing metadata
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|
1847 } |
2726
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|
1848 } |
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|
1849 else |
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|
1850 { |
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|
1851 result = Json::arrayValue; |
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|
1852 |
4551
350a22c094f2
testing replay of transactions
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4514
diff
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|
1853 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
2726
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|
1854 { |
5274
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|
1855 if (isNumeric) |
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|
1856 { |
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Added option "?numeric" if listing metadata
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|
1857 result.append(it->first); |
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|
1858 } |
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1859 else |
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Added option "?numeric" if listing metadata
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|
1860 { |
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Added option "?numeric" if listing metadata
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|
1861 result.append(EnumerationToString(it->first)); |
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Added option "?numeric" if listing metadata
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|
1862 } |
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|
1863 } |
751
5197fd35333c
refactoring of OrthancRestApi
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diff
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|
1864 } |
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|
1865 |
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diff
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|
1866 call.GetOutput().AnswerJson(result); |
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diff
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|
1867 } |
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diff
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|
1868 |
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diff
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|
1869 |
4657 | 1870 static void SetStringContentETag(const RestApiOutput& output, |
1871 int64_t revision, | |
1872 const std::string& value) | |
4640
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|
1873 { |
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|
1874 std::string md5; |
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|
1875 Toolbox::ComputeMD5(md5, value); |
66109d24d26e
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|
1876 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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|
1877 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1878 } |
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1879 |
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|
1880 |
4657 | 1881 static void SetBufferContentETag(const RestApiOutput& output, |
4640
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|
1882 int64_t revision, |
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|
1883 const void* data, |
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|
1884 size_t size) |
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1885 { |
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|
1886 std::string md5; |
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|
1887 Toolbox::ComputeMD5(md5, data, size); |
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
1888 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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|
1889 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1890 } |
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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1891 |
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
1892 |
4657 | 1893 static void SetAttachmentETag(const RestApiOutput& output, |
4640
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|
1894 int64_t revision, |
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|
1895 const FileInfo& info) |
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|
1896 { |
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|
1897 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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|
1898 info.GetUncompressedMD5() + "\""); |
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|
1899 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1900 } |
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|
1901 |
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|
1902 |
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|
1903 static std::string GetMD5(const std::string& value) |
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1904 { |
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|
1905 std::string md5; |
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1906 Toolbox::ComputeMD5(md5, value); |
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|
1907 return md5; |
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1908 } |
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1909 |
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|
1910 |
4623
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|
1911 static bool GetRevisionHeader(int64_t& revision /* out */, |
4640
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|
1912 std::string& md5 /* out */, |
4623
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|
1913 const RestApiCall& call, |
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|
1914 const std::string& header) |
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|
1915 { |
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|
1916 std::string lower; |
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|
1917 Toolbox::ToLowerCase(lower, header); |
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|
1918 |
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|
1919 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1920 if (found == call.GetHttpHeaders().end()) |
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|
1921 { |
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|
1922 return false; |
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|
1923 } |
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|
1924 else |
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|
1925 { |
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|
1926 std::string value = Toolbox::StripSpaces(found->second); |
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|
1927 Toolbox::RemoveSurroundingQuotes(value); |
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|
1928 |
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changeset
|
1929 try |
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changeset
|
1930 { |
4640
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|
1931 size_t comma = value.find('-'); |
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|
1932 if (comma != std::string::npos) |
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1933 { |
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|
1934 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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|
1935 md5 = value.substr(comma + 1); |
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|
1936 return true; |
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|
1937 } |
4623
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|
1938 } |
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changeset
|
1939 catch (boost::bad_lexical_cast&) |
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|
1940 { |
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changeset
|
1941 } |
4640
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|
1942 |
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|
1943 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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changeset
|
1944 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
4623
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changeset
|
1945 } |
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1946 } |
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1947 |
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1948 |
974 | 1949 static void GetMetadata(RestApiGetCall& call) |
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1950 { |
4414 | 1951 if (call.IsDocumentation()) |
1952 { | |
1953 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1954 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1955 call.GetDocumentation() | |
1956 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1957 .SetSummary("Get metadata") | |
1958 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
1959 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1960 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1961 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1962 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1963 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
4414 | 1964 return; |
1965 } | |
1966 | |
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1967 assert(!call.GetFullUri().empty()); |
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1968 const std::string publicId = call.GetUriComponent("id", ""); |
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1969 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1970 |
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1971 std::string name = call.GetUriComponent("name", ""); |
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1972 MetadataType metadata = StringToMetadata(name); |
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1973 |
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1974 std::string value; |
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1975 int64_t revision; |
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1976 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1977 { |
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1978 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
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1979 |
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1980 int64_t userRevision; |
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1981 std::string userMD5; |
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1982 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1983 userRevision == revision && |
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1984 userMD5 == GetMD5(value)) |
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1985 { |
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1986 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1987 } |
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1988 else |
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1989 { |
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1990 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1991 } |
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1992 } |
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1993 } |
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1994 |
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1995 |
974 | 1996 static void DeleteMetadata(RestApiDeleteCall& call) |
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1997 { |
4414 | 1998 if (call.IsDocumentation()) |
1999 { | |
2000 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2001 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2002 call.GetDocumentation() | |
2003 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2004 .SetSummary("Delete metadata") | |
2005 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
2006 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
2007 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
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2008 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
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2009 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
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2010 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
4414 | 2011 return; |
2012 } | |
2013 | |
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2014 CheckValidResourceType(call); |
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2015 const std::string publicId = call.GetUriComponent("id", ""); |
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2016 |
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2017 std::string name = call.GetUriComponent("name", ""); |
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2018 MetadataType metadata = StringToMetadata(name); |
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|
2019 |
5446
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2020 if (IsUserMetadata(metadata) || // It is forbidden to delete internal metadata... |
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2021 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
4623
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2022 { |
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2023 bool found; |
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2024 int64_t revision; |
4640
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|
2025 std::string md5; |
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|
2026 if (GetRevisionHeader(revision, md5, call, "if-match")) |
4623
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2027 { |
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2028 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
4623
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|
2029 } |
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|
2030 else |
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|
2031 { |
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|
2032 OrthancConfiguration::ReaderLock lock; |
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|
2033 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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|
2034 { |
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|
2035 throw OrthancException(ErrorCode_Revision, |
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
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4657
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|
2036 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
4623
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2037 } |
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|
2038 else |
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|
2039 { |
4640
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|
2040 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
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2041 } |
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2042 } |
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|
2043 |
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2044 if (found) |
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|
2045 { |
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|
2046 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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2047 } |
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2048 else |
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2049 { |
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2050 throw OrthancException(ErrorCode_UnknownResource); |
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2051 } |
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|
2052 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents:
2127
diff
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|
2053 else |
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
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|
2054 { |
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2055 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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|
2056 } |
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|
2057 } |
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|
2058 |
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|
2059 |
974 | 2060 static void SetMetadata(RestApiPutCall& call) |
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2061 { |
4414 | 2062 if (call.IsDocumentation()) |
2063 { | |
2064 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2065 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2066 call.GetDocumentation() | |
2067 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2068 .SetSummary("Set metadata") | |
2069 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
2070 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
2071 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
2072 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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2073 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
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2074 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
4414 | 2075 return; |
2076 } | |
2077 | |
751
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|
2078 CheckValidResourceType(call); |
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|
2079 |
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diff
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|
2080 std::string publicId = call.GetUriComponent("id", ""); |
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|
2081 std::string name = call.GetUriComponent("name", ""); |
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|
2082 MetadataType metadata = StringToMetadata(name); |
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|
2083 |
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|
2084 std::string value; |
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|
2085 call.BodyToString(value); |
751
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diff
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|
2086 |
5446
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|
2087 if (IsUserMetadata(metadata) || // It is forbidden to modify internal metadata... |
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|
2088 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
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|
2089 { |
4623
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Sebastien Jodogne <s.jodogne@gmail.com>
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4589
diff
changeset
|
2090 int64_t oldRevision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2091 std::string oldMD5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2092 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
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|
2093 |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
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|
2094 if (!hasOldRevision) |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
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|
2095 { |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2096 OrthancConfiguration::ReaderLock lock; |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2097 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
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|
2098 { |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2099 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
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|
2100 // the actual value of "oldRevision" if the metadata is |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2101 // inexistent as expected |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2102 hasOldRevision = true; |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2103 oldRevision = -1; // dummy value |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2104 oldMD5.clear(); // dummy value |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2105 } |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2106 } |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2107 |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
2108 int64_t newRevision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2109 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2110 hasOldRevision, oldRevision, oldMD5); |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2111 |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2112 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2113 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2114 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2115 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2116 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
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|
2117 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2118 } |
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2119 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2120 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2121 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2122 |
5221
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started implementation of labels
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|
2123 // Handling of labels ------------------------------------------------------- |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2124 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2125 static void ListLabels(RestApiGetCall& call) |
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2126 { |
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2127 if (call.IsDocumentation()) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
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|
2128 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2129 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2130 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2131 call.GetDocumentation() |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2132 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
5275
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
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|
2133 .SetSummary("List labels") |
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
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5274
diff
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|
2134 .SetDescription("Get the labels that are associated with the given " + r + " (new in Orthanc 1.12.0)") |
5221
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2135 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2136 .AddAnswerType(MimeType_Json, "JSON array containing the names of the labels") |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2137 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/labels", true); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
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|
2138 return; |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2139 } |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2140 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2141 assert(!call.GetFullUri().empty()); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2142 const std::string publicId = call.GetUriComponent("id", ""); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2143 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2144 |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2145 std::set<std::string> labels; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2146 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2147 |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2148 Json::Value result = Json::arrayValue; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2149 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2150 for (std::set<std::string>::const_iterator it = labels.begin(); it != labels.end(); ++it) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2151 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2152 result.append(*it); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2153 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2154 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2155 call.GetOutput().AnswerJson(result); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2156 } |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2157 |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2158 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2159 static void GetLabel(RestApiGetCall& call) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2160 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2161 if (call.IsDocumentation()) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2162 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2163 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2164 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2165 call.GetDocumentation() |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2166 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2167 .SetSummary("Test label") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2168 .SetDescription("Test whether the " + r + " is associated with the given label") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2169 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2170 .SetUriArgument("label", "The label of interest") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2171 .AddAnswerType(MimeType_PlainText, "Empty string is returned in the case of presence, error 404 in the case of absence"); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2172 return; |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2173 } |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2174 |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2175 CheckValidResourceType(call); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2176 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2177 assert(!call.GetFullUri().empty()); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
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|
2178 const std::string publicId = call.GetUriComponent("id", ""); |
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2179 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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|
2180 |
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|
2181 std::string label = call.GetUriComponent("label", ""); |
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|
2182 |
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|
2183 std::set<std::string> labels; |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2184 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2185 |
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diff
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|
2186 if (labels.find(label) != labels.end()) |
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diff
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|
2187 { |
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diff
changeset
|
2188 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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diff
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|
2189 } |
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diff
changeset
|
2190 } |
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diff
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|
2191 |
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diff
changeset
|
2192 |
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diff
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|
2193 static void AddLabel(RestApiPutCall& call) |
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diff
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|
2194 { |
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diff
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|
2195 if (call.IsDocumentation()) |
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diff
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|
2196 { |
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|
2197 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
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diff
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|
2198 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
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diff
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|
2199 call.GetDocumentation() |
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diff
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|
2200 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
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diff
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|
2201 .SetSummary("Add label") |
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diff
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|
2202 .SetDescription("Associate a label with a " + r) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2203 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2204 .SetUriArgument("label", "The label to be added"); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
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|
2205 return; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2206 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2207 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2208 CheckValidResourceType(call); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2209 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2210 std::string publicId = call.GetUriComponent("id", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2211 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2212 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2213 std::string label = call.GetUriComponent("label", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2214 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Add); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2215 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2216 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2217 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2218 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2219 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2220 static void RemoveLabel(RestApiDeleteCall& call) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2221 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2222 if (call.IsDocumentation()) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2223 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2224 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2225 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2226 call.GetDocumentation() |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2227 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2228 .SetSummary("Remove label") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2229 .SetDescription("Remove a label associated with a " + r) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2230 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2231 .SetUriArgument("label", "The label to be removed"); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2232 return; |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2233 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2234 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2235 CheckValidResourceType(call); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2236 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2237 std::string publicId = call.GetUriComponent("id", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2238 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2239 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2240 std::string label = call.GetUriComponent("label", ""); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2241 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Remove); |
d0f7c742d397
started implementation of labels
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5200
diff
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|
2242 |
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2243 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
d0f7c742d397
started implementation of labels
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parents:
5200
diff
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|
2244 } |
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diff
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|
2245 |
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diff
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|
2246 |
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diff
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|
2247 // Handling of attached files ----------------------------------------------- |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2248 |
974 | 2249 static void ListAttachments(RestApiGetCall& call) |
751
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refactoring of OrthancRestApi
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diff
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|
2250 { |
4409 | 2251 if (call.IsDocumentation()) |
2252 { | |
2253 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2254 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2255 call.GetDocumentation() | |
2256 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2257 .SetSummary("List attachments") | |
2258 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
2259 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
4853
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Added links to download attachments from the Orthanc Explorer
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|
2260 .SetHttpGetArgument("full", RestApiCallDocumentation::Type_String, |
b3d0a3a4d890
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4836
diff
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|
2261 "If present, retrieve the attachments list and their numerical ids", false) |
4409 | 2262 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") |
2263 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
2264 return; | |
2265 } | |
2266 | |
2267 const std::string resourceType = call.GetFullUri() [0]; | |
2268 const std::string publicId = call.GetUriComponent("id", ""); | |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
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4513
diff
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|
2269 std::set<FileContentType> attachments; |
751
5197fd35333c
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diff
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|
2270 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
5197fd35333c
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|
2271 |
4853
b3d0a3a4d890
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|
2272 Json::Value result; |
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
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diff
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|
2273 |
b3d0a3a4d890
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|
2274 if (call.HasArgument("full")) |
751
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|
2275 { |
4853
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Added links to download attachments from the Orthanc Explorer
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2276 result = Json::objectValue; |
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|
2277 |
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|
2278 for (std::set<FileContentType>::const_iterator |
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2279 it = attachments.begin(); it != attachments.end(); ++it) |
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|
2280 { |
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|
2281 std::string key = EnumerationToString(*it); |
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2282 result[key] = static_cast<uint16_t>(*it); |
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2283 } |
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|
2284 } |
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|
2285 else |
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|
2286 { |
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|
2287 result = Json::arrayValue; |
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|
2288 |
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2289 for (std::set<FileContentType>::const_iterator |
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2290 it = attachments.begin(); it != attachments.end(); ++it) |
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2291 { |
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|
2292 result.append(EnumerationToString(*it)); |
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2293 } |
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2294 } |
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|
2295 |
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2296 call.GetOutput().AnswerJson(result); |
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2297 } |
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|
2298 |
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2299 |
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|
2300 static void AddAttachmentDocumentation(RestApiGetCall& call, |
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2301 const std::string& resourceType) |
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2302 { |
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2303 call.GetDocumentation() |
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2304 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
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2305 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
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2306 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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2307 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
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2308 } |
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2309 |
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2310 |
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2311 static bool GetAttachmentInfo(FileInfo& info, |
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2312 RestApiGetCall& call) |
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2313 { |
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2314 CheckValidResourceType(call); |
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2315 |
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2316 const std::string publicId = call.GetUriComponent("id", ""); |
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2317 const std::string name = call.GetUriComponent("name", ""); |
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2318 FileContentType contentType = StringToContentType(name); |
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2319 |
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2320 int64_t revision; |
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2321 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
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2322 { |
4640
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2323 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
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2324 |
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|
2325 int64_t userRevision; |
4640
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|
2326 std::string userMD5; |
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changeset
|
2327 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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|
2328 revision == userRevision && |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2329 info.GetUncompressedMD5() == userMD5) |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2330 { |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2331 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2332 return false; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2333 } |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2334 else |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2335 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2336 return true; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2337 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2338 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2339 else |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2340 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2341 throw OrthancException(ErrorCode_UnknownResource); |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2342 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2343 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2344 |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2345 |
974 | 2346 static void GetAttachmentOperations(RestApiGetCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2347 { |
4409 | 2348 if (call.IsDocumentation()) |
2349 { | |
2350 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2351 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2352 AddAttachmentDocumentation(call, r); |
4409 | 2353 call.GetDocumentation() |
2354 .SetTag("Other") | |
4414 | 2355 .SetSummary("List operations on attachments") |
2356 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
4409 | 2357 .AddAnswerType(MimeType_Json, "List of the available operations") |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
2358 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/6582b1c0-292ad5ab-ba0f088f-f7a1766f-9a29a54f/attachments/dicom", true); |
4409 | 2359 return; |
2360 } | |
2361 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2362 FileInfo info; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2363 if (GetAttachmentInfo(info, call)) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2364 { |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2365 Json::Value operations = Json::arrayValue; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2366 |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2367 operations.append("compress"); |
751
5197fd35333c
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diff
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|
2368 operations.append("compressed-data"); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2369 |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2370 if (info.GetCompressedMD5() != "") |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2371 { |
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diff
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|
2372 operations.append("compressed-md5"); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2373 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2374 |
5197fd35333c
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diff
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|
2375 operations.append("compressed-size"); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2376 operations.append("data"); |
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2377 operations.append("info"); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
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|
2378 operations.append("is-compressed"); |
751
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2379 |
5197fd35333c
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diff
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|
2380 if (info.GetUncompressedMD5() != "") |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2381 { |
5197fd35333c
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diff
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|
2382 operations.append("md5"); |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2383 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2384 |
5197fd35333c
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diff
changeset
|
2385 operations.append("size"); |
1700
f5ddbd9239dd
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Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
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|
2386 operations.append("uncompress"); |
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2387 |
5197fd35333c
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diff
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|
2388 if (info.GetCompressedMD5() != "" && |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2389 info.GetUncompressedMD5() != "") |
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diff
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|
2390 { |
5197fd35333c
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diff
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|
2391 operations.append("verify-md5"); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2392 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2393 |
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diff
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|
2394 call.GetOutput().AnswerJson(operations); |
5197fd35333c
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|
2395 } |
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diff
changeset
|
2396 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2397 |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2398 |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2399 template <int uncompress> |
974 | 2400 static void GetAttachmentData(RestApiGetCall& call) |
751
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diff
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|
2401 { |
4409 | 2402 if (call.IsDocumentation()) |
2403 { | |
2404 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2405 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2406 call.GetDocumentation() | |
2407 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2408 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
2409 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
4418 | 2410 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
4409 | 2411 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4414 | 2412 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
4627
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4623
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|
2413 .AddAnswerType(MimeType_Binary, "The attachment") |
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4623
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|
2414 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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4623
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|
2415 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
4409 | 2416 return; |
2417 } | |
2418 | |
751
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|
2419 ServerContext& context = OrthancRestApi::GetContext(call); |
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|
2420 |
5197fd35333c
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|
2421 CheckValidResourceType(call); |
5197fd35333c
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|
2422 |
5197fd35333c
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|
2423 std::string publicId = call.GetUriComponent("id", ""); |
1146
200fcac0deb4
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Sebastien Jodogne <s.jodogne@gmail.com>
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1145
diff
changeset
|
2424 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
751
5197fd35333c
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|
2425 |
4640
66109d24d26e
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4627
diff
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|
2426 FileInfo info; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2427 if (GetAttachmentInfo(info, call)) |
1146
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1145
diff
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|
2428 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2429 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
66109d24d26e
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diff
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|
2430 |
66109d24d26e
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diff
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|
2431 if (uncompress) |
4627
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|
2432 { |
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|
2433 context.AnswerAttachment(call.GetOutput(), publicId, type); |
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|
2434 } |
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|
2435 else |
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changeset
|
2436 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2437 // Return the raw data (possibly compressed), as stored on the filesystem |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2438 std::string content; |
5427 | 2439 std::string attachmentId; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2440 int64_t revision; |
5427 | 2441 context.ReadAttachment(content, revision, attachmentId, publicId, type, false, true /* skipCache when you absolutely need the compressed data */); |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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changeset
|
2442 |
66109d24d26e
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|
2443 int64_t userRevision; |
66109d24d26e
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|
2444 std::string userMD5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2445 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
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|
2446 revision == userRevision && |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2447 info.GetUncompressedMD5() == userMD5) |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
2448 { |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
2449 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
2450 } |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
2451 else |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
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|
2452 { |
66109d24d26e
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4627
diff
changeset
|
2453 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
2454 } |
4627
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4623
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|
2455 } |
1146
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1145
diff
changeset
|
2456 } |
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|
2457 } |
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|
2458 |
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2459 |
974 | 2460 static void GetAttachmentSize(RestApiGetCall& call) |
751
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2461 { |
4409 | 2462 if (call.IsDocumentation()) |
2463 { | |
2464 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2465 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
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4623
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|
2466 AddAttachmentDocumentation(call, r); |
4409 | 2467 call.GetDocumentation() |
2468 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2469 .SetSummary("Get size of attachment") | |
2470 .SetDescription("Get the size of one attachment associated with the given " + r) | |
2471 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
2472 return; | |
2473 } | |
2474 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2475 FileInfo info; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2476 if (GetAttachmentInfo(info, call)) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2477 { |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2478 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2479 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2480 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2481 |
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2482 static void GetAttachmentInfo(RestApiGetCall& call) |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2483 { |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2484 if (call.IsDocumentation()) |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2485 { |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2486 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2487 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2488 AddAttachmentDocumentation(call, r); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2489 call.GetDocumentation() |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2490 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2491 .SetSummary("Get info about the attachment") |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2492 .SetDescription("Get all the information about the attachment associated with the given " + r) |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2493 .AddAnswerType(MimeType_Json, "JSON object containing the information about the attachment") |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
2494 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/attachments/dicom/info", true); |
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2495 return; |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2496 } |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2497 |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2498 FileInfo info; |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2499 if (GetAttachmentInfo(info, call)) |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2500 { |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2501 Json::Value result = Json::objectValue; |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2502 result["Uuid"] = info.GetUuid(); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2503 result["ContentType"] = info.GetContentType(); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2504 result["UncompressedSize"] = Json::Value::UInt64(info.GetUncompressedSize()); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2505 result["CompressedSize"] = Json::Value::UInt64(info.GetCompressedSize()); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2506 result["UncompressedMD5"] = info.GetUncompressedMD5(); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2507 result["CompressedMD5"] = info.GetCompressedMD5(); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2508 |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2509 call.GetOutput().AnswerJson(result); |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2510 } |
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2511 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2512 |
974 | 2513 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2514 { |
4409 | 2515 if (call.IsDocumentation()) |
2516 { | |
2517 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2518 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2519 AddAttachmentDocumentation(call, r); |
4409 | 2520 call.GetDocumentation() |
2521 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
4410 | 2522 .SetSummary("Get size of attachment on disk") |
4409 | 2523 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
4413 | 2524 "This is different from `.../size` iff `EnableStorage` is `true`.") |
4410 | 2525 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
4409 | 2526 return; |
2527 } | |
2528 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2529 FileInfo info; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2530 if (GetAttachmentInfo(info, call)) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2531 { |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2532 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2533 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2534 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2535 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2536 |
974 | 2537 static void GetAttachmentMD5(RestApiGetCall& call) |
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2538 { |
4410 | 2539 if (call.IsDocumentation()) |
2540 { | |
2541 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2542 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
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handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2543 AddAttachmentDocumentation(call, r); |
4410 | 2544 call.GetDocumentation() |
2545 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2546 .SetSummary("Get MD5 of attachment") | |
2547 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
2548 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
2549 return; | |
2550 } | |
2551 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2552 FileInfo info; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2553 if (GetAttachmentInfo(info, call) && |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2554 info.GetUncompressedMD5() != "") |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2555 { |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2556 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2557 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2558 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2559 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2560 |
974 | 2561 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2562 { |
4410 | 2563 if (call.IsDocumentation()) |
2564 { | |
2565 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2566 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
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handling revisions of attachments
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parents:
4623
diff
changeset
|
2567 AddAttachmentDocumentation(call, r); |
4410 | 2568 call.GetDocumentation() |
2569 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2570 .SetSummary("Get MD5 of attachment on disk") | |
2571 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
4413 | 2572 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
4410 | 2573 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
2574 return; | |
2575 } | |
2576 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2577 FileInfo info; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2578 if (GetAttachmentInfo(info, call) && |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2579 info.GetCompressedMD5() != "") |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2580 { |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2581 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
751
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2582 } |
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2583 } |
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2584 |
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2585 |
974 | 2586 static void VerifyAttachment(RestApiPostCall& call) |
751
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refactoring of OrthancRestApi
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parents:
diff
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|
2587 { |
4410 | 2588 if (call.IsDocumentation()) |
2589 { | |
2590 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2591 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2592 call.GetDocumentation() | |
2593 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2594 .SetSummary("Verify attachment") | |
2595 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
2596 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
4414 | 2597 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
4410 | 2598 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
2599 return; | |
2600 } | |
2601 | |
751
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|
2602 ServerContext& context = OrthancRestApi::GetContext(call); |
5197fd35333c
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diff
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|
2603 CheckValidResourceType(call); |
5197fd35333c
refactoring of OrthancRestApi
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|
2604 |
5197fd35333c
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parents:
diff
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|
2605 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
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|
2606 std::string name = call.GetUriComponent("name", ""); |
4627
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handling revisions of attachments
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4623
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|
2607 FileContentType contentType = StringToContentType(name); |
751
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|
2608 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2609 FileInfo info; |
4627
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4623
diff
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|
2610 int64_t revision; // Ignored |
f7d5372b59b3
handling revisions of attachments
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4623
diff
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|
2611 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
751
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parents:
diff
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|
2612 info.GetCompressedMD5() == "" || |
5197fd35333c
refactoring of OrthancRestApi
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|
2613 info.GetUncompressedMD5() == "") |
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2614 { |
5197fd35333c
refactoring of OrthancRestApi
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|
2615 // Inexistent resource, or no MD5 available |
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|
2616 return; |
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refactoring of OrthancRestApi
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diff
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|
2617 } |
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2618 |
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diff
changeset
|
2619 bool ok = false; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2620 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2621 // First check whether the compressed data is correctly stored in the disk |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2622 std::string data; |
5427 | 2623 std::string attachmentId; |
2624 | |
2625 context.ReadAttachment(data, revision, attachmentId, publicId, StringToContentType(name), false, true /* skipCache when you absolutely need the compressed data */); | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2626 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2627 std::string actualMD5; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2628 Toolbox::ComputeMD5(actualMD5, data); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2629 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2630 if (actualMD5 == info.GetCompressedMD5()) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2631 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2632 // The compressed data is OK. If a compression algorithm was |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2633 // applied to it, now check the MD5 of the uncompressed data. |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2634 if (info.GetCompressionType() == CompressionType_None) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2635 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2636 ok = true; |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2637 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2638 else |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2639 { |
5427 | 2640 context.ReadAttachment(data, revision, attachmentId, publicId, StringToContentType(name), true, true /* skipCache when you absolutely need the compressed data */); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2641 Toolbox::ComputeMD5(actualMD5, data); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2642 ok = (actualMD5 == info.GetUncompressedMD5()); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2643 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2644 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2645 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2646 if (ok) |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2647 { |
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2648 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2649 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2650 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2651 else |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2652 { |
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2653 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2654 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2655 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2656 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2657 |
974 | 2658 static void UploadAttachment(RestApiPutCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2659 { |
4414 | 2660 if (call.IsDocumentation()) |
2661 { | |
2662 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2663 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2664 call.GetDocumentation() | |
2665 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2666 .SetSummary("Set attachment") | |
2667 .SetDescription("Attach a file to the given DICOM " + r + | |
2668 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
2669 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
2670 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
2671 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2672 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2673 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
4414 | 2674 return; |
2675 } | |
2676 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2677 ServerContext& context = OrthancRestApi::GetContext(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2678 CheckValidResourceType(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2679 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2680 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2681 std::string name = call.GetUriComponent("name", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2682 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2683 FileContentType contentType = StringToContentType(name); |
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2684 if (IsUserContentType(contentType) || // It is forbidden to modify internal attachments... |
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2685 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2686 { |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2687 int64_t oldRevision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2688 std::string oldMD5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2689 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2690 |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2691 if (!hasOldRevision) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2692 { |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2693 OrthancConfiguration::ReaderLock lock; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2694 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2695 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2696 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2697 // the actual value of "oldRevision" if the metadata is |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2698 // inexistent as expected |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2699 hasOldRevision = true; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2700 oldRevision = -1; // dummy value |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2701 oldMD5.clear(); // dummy value |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2702 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2703 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2704 |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2705 int64_t newRevision; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2706 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2707 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2708 |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2709 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2710 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2711 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2712 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2713 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2714 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2715 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2716 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2717 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2718 |
974 | 2719 static void DeleteAttachment(RestApiDeleteCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2720 { |
4413 | 2721 if (call.IsDocumentation()) |
2722 { | |
2723 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2724 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2725 call.GetDocumentation() | |
2726 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2727 .SetSummary("Delete attachment") | |
4414 | 2728 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
2729 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
4413 | 2730 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2731 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2732 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2733 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
4413 | 2734 return; |
2735 } | |
2736 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2737 CheckValidResourceType(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2738 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2739 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2740 std::string name = call.GetUriComponent("name", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2741 FileContentType contentType = StringToContentType(name); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2742 |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2743 bool allowed; |
5446
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2744 if (IsUserContentType(contentType) || // It is forbidden to delete internal attachments... |
912565317b9a
plugins are now allowed to modify/delete private metadata/attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5432
diff
changeset
|
2745 call.GetRequestOrigin() == RequestOrigin_Plugins) // ...except for plugins |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2746 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2747 allowed = true; |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2748 } |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2749 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2750 { |
2940
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2751 OrthancConfiguration::ReaderLock lock; |
4767d36679ed
refactoring access to Orthanc configuration
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parents:
2935
diff
changeset
|
2752 |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2753 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2754 contentType == FileContentType_DicomAsJson) |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2755 { |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2756 allowed = true; |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2757 } |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2758 else |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2759 { |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2760 // It is forbidden to delete internal attachments, except for |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2761 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2762 // would be automatically reconstructed on the next GET call) |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2763 allowed = false; |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2764 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2765 } |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2766 |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2767 if (allowed) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2768 { |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2769 bool found; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2770 int64_t revision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2771 std::string md5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2772 if (GetRevisionHeader(revision, md5, call, "if-match")) |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2773 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2774 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2775 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2776 else |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2777 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2778 OrthancConfiguration::ReaderLock lock; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2779 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2780 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2781 throw OrthancException(ErrorCode_Revision, |
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2782 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2783 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2784 else |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2785 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2786 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2787 false, -1 /* dummy value */, "" /* dummy value */); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2788 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2789 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2790 |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2791 if (found) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2792 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2793 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2794 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2795 else |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2796 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2797 throw OrthancException(ErrorCode_UnknownResource); |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2798 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2799 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2800 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2801 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2802 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2803 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2804 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2805 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2806 |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2807 template <enum CompressionType compression> |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2808 static void ChangeAttachmentCompression(RestApiPostCall& call) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2809 { |
4413 | 2810 if (call.IsDocumentation()) |
2811 { | |
2812 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2813 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2814 call.GetDocumentation() | |
2815 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2816 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
2817 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
2818 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
4414 | 2819 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
4413 | 2820 return; |
2821 } | |
2822 | |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2823 CheckValidResourceType(call); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2824 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2825 std::string publicId = call.GetUriComponent("id", ""); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2826 std::string name = call.GetUriComponent("name", ""); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2827 FileContentType contentType = StringToContentType(name); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2828 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2829 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2830 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2831 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2832 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2833 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2834 static void IsAttachmentCompressed(RestApiGetCall& call) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2835 { |
4413 | 2836 if (call.IsDocumentation()) |
2837 { | |
2838 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2839 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2840 AddAttachmentDocumentation(call, r); |
4413 | 2841 call.GetDocumentation() |
2842 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2843 .SetSummary("Is attachment compressed?") | |
2844 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
2845 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
2846 return; | |
2847 } | |
2848 | |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2849 FileInfo info; |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2850 if (GetAttachmentInfo(info, call)) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2851 { |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2852 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2853 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2854 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2855 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2856 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2857 |
782 | 2858 // Raw access to the DICOM tags of an instance ------------------------------ |
2859 | |
974 | 2860 static void GetRawContent(RestApiGetCall& call) |
782 | 2861 { |
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2862 if (call.IsDocumentation()) |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2863 { |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2864 call.GetDocumentation() |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2865 .SetTag("Instances") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2866 .SetSummary("Get raw tag") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2867 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2868 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
5393
c5c00bee291a
in openapi generator: renamed '...' into 'path' since '...' is an invalid name
Alain Mazy <am@osimis.io>
parents:
5392
diff
changeset
|
2869 .SetUriArgument("path", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2870 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2871 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2872 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2873 "or JSON array containing the list of available tags if accessing a dataset"); |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2874 return; |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2875 } |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2876 |
782 | 2877 std::string id = call.GetUriComponent("id", ""); |
2878 | |
2879 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
2880 | |
2881 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
2882 } | |
2883 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2884 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2885 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2886 static bool ExtractSharedTags(Json::Value& shared, |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2887 ServerContext& context, |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2888 const std::string& publicId) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2889 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2890 // Retrieve all the instances of this patient/study/series |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2891 typedef std::list<std::string> Instances; |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2892 Instances instances; |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2893 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2894 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2895 // Loop over the instances |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2896 bool isFirst = true; |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2897 shared = Json::objectValue; |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2898 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2899 for (Instances::const_iterator it = instances.begin(); |
1303 | 2900 it != instances.end(); ++it) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2901 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2902 // Get the tags of the current instance, in the simplified format |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2903 Json::Value tags; |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2904 |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2905 try |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2906 { |
2124 | 2907 context.ReadDicomAsJson(tags, *it); |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2908 } |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2909 catch (OrthancException&) |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2910 { |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2911 // Race condition: This instance has been removed since |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2912 // (*). Ignore this instance. |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2913 continue; |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2914 } |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2915 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2916 if (tags.type() != Json::objectValue) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2917 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2918 return false; // Error |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2919 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2920 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2921 // Only keep the tags that are mapped to a string |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2922 Json::Value::Members members = tags.getMemberNames(); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2923 for (size_t i = 0; i < members.size(); i++) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2924 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2925 const Json::Value& tag = tags[members[i]]; |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2926 if (tag.type() != Json::objectValue || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2927 tag["Type"].type() != Json::stringValue || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2928 tag["Type"].asString() != "String") |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2929 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2930 tags.removeMember(members[i]); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2931 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2932 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2933 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2934 if (isFirst) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2935 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2936 // This is the first instance, keep its tags as such |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2937 shared = tags; |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2938 isFirst = false; |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2939 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2940 else |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2941 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2942 // Loop over all the members of the shared tags extracted so |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2943 // far. If the value of one of these tags does not match its |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2944 // value in the current instance, remove it. |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2945 members = shared.getMemberNames(); |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2946 for (size_t i = 0; i < members.size(); i++) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2947 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2948 if (!tags.isMember(members[i]) || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2949 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2950 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2951 shared.removeMember(members[i]); |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2952 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2953 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2954 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2955 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2956 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2957 return true; |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2958 } |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2959 |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2960 |
974 | 2961 static void GetSharedTags(RestApiGetCall& call) |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2962 { |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2963 if (call.IsDocumentation()) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2964 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2965 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2966 |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2967 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2968 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2969 call.GetDocumentation() |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2970 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2971 .SetSummary("Get shared tags") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2972 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2973 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2974 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2975 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2976 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2977 return; |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2978 } |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2979 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2980 ServerContext& context = OrthancRestApi::GetContext(call); |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2981 std::string publicId = call.GetUriComponent("id", ""); |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2982 |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2983 Json::Value sharedTags; |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2984 if (ExtractSharedTags(sharedTags, context, publicId)) |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2985 { |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2986 // Success: Send the value of the shared tags |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2987 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2988 } |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2989 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2990 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2991 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2992 template <enum ResourceType resourceType, |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2993 enum DicomModule module> |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2994 static void GetModule(RestApiGetCall& call) |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2995 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2996 if (call.IsDocumentation()) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2997 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2998 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2999 std::string m; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3000 switch (module) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3001 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3002 case DicomModule_Patient: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3003 m = "patient"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3004 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3005 case DicomModule_Study: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3006 m = "study"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3007 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3008 case DicomModule_Series: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3009 m = "series"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3010 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3011 case DicomModule_Instance: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3012 m = "instance"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3013 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3014 default: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3015 throw OrthancException(ErrorCode_ParameterOutOfRange); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3016 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3017 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3018 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3019 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3020 call.GetDocumentation() |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3021 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3022 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3023 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3024 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3025 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3026 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3027 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3028 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3029 return; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3030 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3031 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3032 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3033 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3034 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3035 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3036 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3037 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
3038 { |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
3039 throw OrthancException(ErrorCode_NotImplemented); |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
3040 } |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
3041 |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3042 ServerContext& context = OrthancRestApi::GetContext(call); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3043 std::string publicId = call.GetUriComponent("id", ""); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3044 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3045 std::set<DicomTag> ignoreTagLength; |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3046 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3047 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3048 typedef std::set<DicomTag> ModuleTags; |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3049 ModuleTags moduleTags; |
1368 | 3050 DicomTag::AddTagsForModule(moduleTags, module); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3051 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3052 Json::Value tags; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3053 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3054 if (resourceType != ResourceType_Instance) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3055 { |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3056 // Retrieve all the instances of this patient/study/series |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3057 typedef std::list<std::string> Instances; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3058 Instances instances; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3059 context.GetIndex().GetChildInstances(instances, publicId); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3060 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3061 if (instances.empty()) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3062 { |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3063 return; // Error: No instance (should never happen) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3064 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3065 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3066 // Select one child instance |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3067 publicId = instances.front(); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3068 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3069 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3070 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3071 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3072 // Filter the tags of the instance according to the module |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3073 Json::Value result = Json::objectValue; |
1303 | 3074 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3075 { |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3076 std::string s = tag->Format(); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3077 if (tags.isMember(s)) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3078 { |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3079 result[s] = tags[s]; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3080 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3081 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3082 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3083 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3084 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3085 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3086 |
1722 | 3087 namespace |
3088 { | |
3089 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
3090 } | |
3091 | |
3092 | |
3093 static void AccumulateLookupResults(LookupResults& result, | |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3094 ServerIndex& index, |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3095 const DicomTag& tag, |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3096 const std::string& value, |
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3097 ResourceType level) |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3098 { |
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
3099 std::vector<std::string> tmp; |
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
3100 index.LookupIdentifierExact(tmp, level, tag, value); |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3101 |
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
3102 for (size_t i = 0; i < tmp.size(); i++) |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3103 { |
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
3104 result.push_back(std::make_pair(level, tmp[i])); |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3105 } |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3106 } |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3107 |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3108 |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3109 static void Lookup(RestApiPostCall& call) |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3110 { |
4422 | 3111 if (call.IsDocumentation()) |
3112 { | |
3113 call.GetDocumentation() | |
3114 .SetTag("System") | |
3115 .SetSummary("Look for DICOM identifiers") | |
3116 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
3117 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
3118 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
3119 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
3120 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
3121 "DICOM resource that is stored by Orthanc"); | |
3122 return; | |
3123 } | |
3124 | |
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
3125 std::string tag; |
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
3126 call.BodyToString(tag); |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3127 |
1722 | 3128 LookupResults resources; |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3129 ServerIndex& index = OrthancRestApi::GetIndex(call); |
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3130 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
3b1f7e706d38
fix Orthanc.test_lookup
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parents:
1718
diff
changeset
|
3131 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3132 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3133 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3134 |
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3135 Json::Value result = Json::arrayValue; |
1722 | 3136 for (LookupResults::const_iterator |
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3137 it = resources.begin(); it != resources.end(); ++it) |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3138 { |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
1054
diff
changeset
|
3139 ResourceType type = it->first; |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3140 const std::string& id = it->second; |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3141 |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
1054
diff
changeset
|
3142 Json::Value item = Json::objectValue; |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3143 item["Type"] = EnumerationToString(type); |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
1054
diff
changeset
|
3144 item["ID"] = id; |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3145 item["Path"] = GetBasePath(type, id); |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3146 |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3147 result.append(item); |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
1054
diff
changeset
|
3148 } |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3149 |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
1054
diff
changeset
|
3150 call.GetOutput().AnswerJson(result); |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
1054
diff
changeset
|
3151 } |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3152 |
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3153 |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3154 namespace |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3155 { |
3021
2cbafb5d5a62
renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
3156 class FindVisitor : public ServerContext::ILookupVisitor |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
2998
diff
changeset
|
3157 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3158 private: |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3159 bool isComplete_; |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3160 std::list<std::string> resources_; |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3161 FindStorageAccessMode findStorageAccessMode_; |
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3162 |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3163 // cache the data we used during lookup and that we could reuse when building the answers |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3164 std::map<std::string, std::string> instancesIds_; // the id of an instance for each found resource. |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3165 std::map<std::string, boost::shared_ptr<DicomMap> > resourcesMainDicomTags_; // all tags read from DB for a resource (current level and upper levels) |
5060
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3166 std::map<std::string, boost::shared_ptr<Json::Value> > resourcesDicomAsJson_; // the dicom-as-json for a resource |
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3167 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3168 DicomToJsonFormat format_; |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3169 |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3170 public: |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3171 explicit FindVisitor(DicomToJsonFormat format, FindStorageAccessMode findStorageAccessMode) : |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3172 isComplete_(false), |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3173 findStorageAccessMode_(findStorageAccessMode), |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3174 format_(format) |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3175 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3176 } |
4205 | 3177 |
3178 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3179 { |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3180 return false; // (*) |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3181 } |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3182 |
4205 | 3183 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3184 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3185 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3186 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3187 |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3188 virtual void Visit(const std::string& publicId, |
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3189 const std::string& instanceId, |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3190 const DicomMap& mainDicomTags, |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3191 const Json::Value* dicomAsJson) ORTHANC_OVERRIDE |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3192 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3193 resources_.push_back(publicId); |
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3194 instancesIds_[publicId] = instanceId; |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3195 resourcesMainDicomTags_[publicId].reset(mainDicomTags.Clone()); |
5060
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3196 if (dicomAsJson != NULL) |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3197 { |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3198 resourcesDicomAsJson_[publicId].reset(new Json::Value(*dicomAsJson)); // keep our own copy because we might reuse it between lookup and answers |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3199 } |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3200 else |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3201 { |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3202 resourcesDicomAsJson_[publicId] = boost::shared_ptr<Json::Value>(); |
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3203 } |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3204 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3205 |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3206 void Answer(RestApiOutput& output, |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3207 ServerContext& context, |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3208 ResourceType level, |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3209 bool expand, |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3210 const std::set<DicomTag>& requestedTags) const |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3211 { |
5554
12d8a1a266e9
introduction of FindRequest and FindResponse
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5485
diff
changeset
|
3212 AnswerListOfResources1(output, context, resources_, instancesIds_, resourcesMainDicomTags_, resourcesDicomAsJson_, level, expand, format_, requestedTags, IsStorageAccessAllowedForAnswers(findStorageAccessMode_)); |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3213 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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2998
diff
changeset
|
3214 }; |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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2998
diff
changeset
|
3215 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3216 |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
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2998
diff
changeset
|
3217 |
1354 | 3218 static void Find(RestApiPostCall& call) |
3219 { | |
2998 | 3220 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
3221 static const char* const KEY_EXPAND = "Expand"; | |
3222 static const char* const KEY_LEVEL = "Level"; | |
3223 static const char* const KEY_LIMIT = "Limit"; | |
3224 static const char* const KEY_QUERY = "Query"; | |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3225 static const char* const KEY_REQUESTED_TAGS = "RequestedTags"; |
2998 | 3226 static const char* const KEY_SINCE = "Since"; |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3227 static const char* const KEY_LABELS = "Labels"; // New in Orthanc 1.12.0 |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3228 static const char* const KEY_LABELS_CONSTRAINT = "LabelsConstraint"; // New in Orthanc 1.12.0 |
2998 | 3229 |
4421 | 3230 if (call.IsDocumentation()) |
3231 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
3232 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
3233 |
4421 | 3234 call.GetDocumentation() |
3235 .SetTag("System") | |
3236 .SetSummary("Look for local resources") | |
3237 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
3238 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3239 "https://orthanc.uclouvain.be/book/users/rest.html#performing-finds-within-orthanc") |
4421 | 3240 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, |
3241 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
3242 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
3243 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
3244 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
3245 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
3246 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
3247 "Limit the number of reported resources", false) | |
3248 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
3249 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3250 .SetRequestField(KEY_REQUESTED_TAGS, RestApiCallDocumentation::Type_JsonListOfStrings, |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3251 "A list of DICOM tags to include in the response (applicable only if \"Expand\" is set to true). " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3252 "The tags requested tags are returned in the 'RequestedTags' field in the response. " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3253 "Note that, if you are requesting tags that are not listed in the Main Dicom Tags stored in DB, building the response " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3254 "might be slow since Orthanc will need to access the DICOM files. If not specified, Orthanc will return " |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3255 "all Main Dicom Tags to keep backward compatibility with Orthanc prior to 1.11.0.", false) |
4421 | 3256 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, |
3257 "Associative array containing the filter on the values of the DICOM tags", true) | |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3258 .SetRequestField(KEY_LABELS, RestApiCallDocumentation::Type_JsonListOfStrings, |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3259 "List of strings specifying which labels to look for in the resources (new in Orthanc 1.12.0)", true) |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3260 .SetRequestField(KEY_LABELS_CONSTRAINT, RestApiCallDocumentation::Type_String, |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3261 "Constraint on the labels, can be `All`, `Any`, or `None` (defaults to `All`, new in Orthanc 1.12.0)", true) |
4421 | 3262 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
3263 "about the reported resources (if `Expand` argument is `true`)"); | |
3264 return; | |
3265 } | |
3266 | |
1358 | 3267 ServerContext& context = OrthancRestApi::GetContext(call); |
1354 | 3268 |
3269 Json::Value request; | |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3270 if (!call.ParseJsonRequest(request) || |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3271 request.type() != Json::objectValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3272 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3273 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3274 "The body must contain a JSON object"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3275 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3276 else if (!request.isMember(KEY_LEVEL) || |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3277 request[KEY_LEVEL].type() != Json::stringValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3278 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3279 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3280 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3281 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3282 else if (!request.isMember(KEY_QUERY) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3283 request[KEY_QUERY].type() != Json::objectValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3284 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3285 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3286 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3287 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3288 else if (request.isMember(KEY_CASE_SENSITIVE) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3289 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3290 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3291 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3292 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" must be a Boolean"); |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3293 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3294 else if (request.isMember(KEY_LIMIT) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3295 request[KEY_LIMIT].type() != Json::intValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3296 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3297 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3298 "Field \"" + std::string(KEY_LIMIT) + "\" must be an integer"); |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3299 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3300 else if (request.isMember(KEY_SINCE) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3301 request[KEY_SINCE].type() != Json::intValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3302 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3303 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3304 "Field \"" + std::string(KEY_SINCE) + "\" must be an integer"); |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3305 } |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3306 else if (request.isMember(KEY_REQUESTED_TAGS) && |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3307 request[KEY_REQUESTED_TAGS].type() != Json::arrayValue) |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3308 { |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3309 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3310 "Field \"" + std::string(KEY_REQUESTED_TAGS) + "\" must be an array"); |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3311 } |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3312 else if (request.isMember(KEY_LABELS) && |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3313 request[KEY_LABELS].type() != Json::arrayValue) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3314 { |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3315 throw OrthancException(ErrorCode_BadRequest, |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3316 "Field \"" + std::string(KEY_LABELS) + "\" must be an array of strings"); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3317 } |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3318 else if (request.isMember(KEY_LABELS_CONSTRAINT) && |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3319 request[KEY_LABELS_CONSTRAINT].type() != Json::stringValue) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3320 { |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3321 throw OrthancException(ErrorCode_BadRequest, |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3322 "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be an array of strings"); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3323 } |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3324 else |
1354 | 3325 { |
3326 bool expand = false; | |
2998 | 3327 if (request.isMember(KEY_EXPAND)) |
1354 | 3328 { |
2998 | 3329 expand = request[KEY_EXPAND].asBool(); |
1354 | 3330 } |
3331 | |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3332 bool caseSensitive = false; |
2998 | 3333 if (request.isMember(KEY_CASE_SENSITIVE)) |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3334 { |
2998 | 3335 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3336 } |
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3337 |
1758 | 3338 size_t limit = 0; |
2998 | 3339 if (request.isMember(KEY_LIMIT)) |
1758 | 3340 { |
2998 | 3341 int tmp = request[KEY_LIMIT].asInt(); |
1847 | 3342 if (tmp < 0) |
1758 | 3343 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3344 throw OrthancException(ErrorCode_ParameterOutOfRange, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3345 "Field \"" + std::string(KEY_LIMIT) + "\" must be a positive integer"); |
1758 | 3346 } |
1847 | 3347 |
3348 limit = static_cast<size_t>(tmp); | |
1758 | 3349 } |
3350 | |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3351 size_t since = 0; |
2998 | 3352 if (request.isMember(KEY_SINCE)) |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3353 { |
2998 | 3354 int tmp = request[KEY_SINCE].asInt(); |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3355 if (tmp < 0) |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3356 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3357 throw OrthancException(ErrorCode_ParameterOutOfRange, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3358 "Field \"" + std::string(KEY_SINCE) + "\" must be a positive integer"); |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3359 } |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3360 |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3361 since = static_cast<size_t>(tmp); |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3362 } |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3363 |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3364 std::set<DicomTag> requestedTags; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3365 |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3366 if (request.isMember(KEY_REQUESTED_TAGS)) |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3367 { |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3368 FromDcmtkBridge::ParseListOfTags(requestedTags, request[KEY_REQUESTED_TAGS]); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3369 } |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3370 |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3371 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
1360 | 3372 |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3373 DatabaseLookup query; |
1358 | 3374 |
2998 | 3375 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
1354 | 3376 for (size_t i = 0; i < members.size(); i++) |
3377 { | |
2998 | 3378 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
1354 | 3379 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3380 throw OrthancException(ErrorCode_BadRequest, |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3381 "Tag \"" + members[i] + "\" must be associated with a string"); |
1354 | 3382 } |
3383 | |
3163
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3384 const std::string value = request[KEY_QUERY][members[i]].asString(); |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3385 |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3386 if (!value.empty()) |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3387 { |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3388 // An empty string corresponds to an universal constraint, |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3389 // so we ignore it. This mimics the behavior of class |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3390 // "OrthancFindRequestHandler" |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3391 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3392 value, caseSensitive, true); |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3393 } |
1361
94ffb597d297
refactoring of C-Find SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1360
diff
changeset
|
3394 } |
2876 | 3395 |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3396 if (request.isMember(KEY_LABELS)) // New in Orthanc 1.12.0 |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3397 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3398 for (Json::Value::ArrayIndex i = 0; i < request[KEY_LABELS].size(); i++) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3399 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3400 if (request[KEY_LABELS][i].type() != Json::stringValue) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3401 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3402 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS) + "\" must contain strings"); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3403 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3404 else |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3405 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3406 query.AddLabel(request[KEY_LABELS][i].asString()); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3407 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3408 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3409 } |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3410 |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3411 query.SetLabelsConstraint(LabelsConstraint_All); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3412 |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3413 if (request.isMember(KEY_LABELS_CONSTRAINT)) |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3414 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3415 const std::string& s = request[KEY_LABELS_CONSTRAINT].asString(); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3416 if (s == "All") |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3417 { |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3418 query.SetLabelsConstraint(LabelsConstraint_All); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3419 } |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3420 else if (s == "Any") |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3421 { |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3422 query.SetLabelsConstraint(LabelsConstraint_Any); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3423 } |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3424 else if (s == "None") |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3425 { |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3426 query.SetLabelsConstraint(LabelsConstraint_None); |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3427 } |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3428 else |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3429 { |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3430 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be \"All\", \"Any\", or \"None\""); |
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3431 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3432 } |
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3433 |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3434 FindVisitor visitor(OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human), context.GetFindStorageAccessMode()); |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3435 context.Apply(visitor, query, level, since, limit); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3436 visitor.Answer(call.GetOutput(), context, level, expand, requestedTags); |
1354 | 3437 } |
3438 } | |
3439 | |
3440 | |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3441 template <enum ResourceType start, |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3442 enum ResourceType end> |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3443 static void GetChildResources(RestApiGetCall& call) |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3444 { |
4415 | 3445 if (call.IsDocumentation()) |
3446 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3447 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3448 OrthancRestApi::DocumentRequestedTags(call); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3449 |
4415 | 3450 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
3451 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
3452 call.GetDocumentation() | |
3453 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
3454 .SetSummary("Get child " + children) | |
3455 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3456 resource + " whose Orthanc identifier is provided in the URL") |
4415 | 3457 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3458 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3459 "If false or missing, only retrieve the list of child " + children, false) |
4415 | 3460 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) |
3461 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
3462 return; | |
3463 } | |
3464 | |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3465 ServerIndex& index = OrthancRestApi::GetIndex(call); |
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3466 ServerContext& context = OrthancRestApi::GetContext(call); |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3467 |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3468 std::set<DicomTag> requestedTags; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3469 OrthancRestApi::GetRequestedTags(requestedTags, call); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3470 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3471 std::list<std::string> a, b, c; |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3472 a.push_back(call.GetUriComponent("id", "")); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3473 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3474 ResourceType type = start; |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3475 while (type != end) |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3476 { |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3477 b.clear(); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3478 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3479 for (std::list<std::string>::const_iterator |
1303 | 3480 it = a.begin(); it != a.end(); ++it) |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3481 { |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3482 index.GetChildren(c, *it); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3483 b.splice(b.begin(), c); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3484 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3485 |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3486 type = GetChildResourceType(type); |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3487 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3488 a.clear(); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3489 a.splice(a.begin(), b); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3490 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3491 |
5554
12d8a1a266e9
introduction of FindRequest and FindResponse
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5485
diff
changeset
|
3492 AnswerListOfResources2(call.GetOutput(), context, a, type, !call.HasArgument("expand") || call.GetBooleanArgument("expand", false), // this "expand" is the only one to have a false default value to keep backward compatibility |
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3493 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), |
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3494 requestedTags, |
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3495 true /* allowStorageAccess */); |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3496 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3497 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3498 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3499 static void GetChildInstancesTags(RestApiGetCall& call) |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3500 { |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3501 if (call.IsDocumentation()) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3502 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3503 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3504 |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3505 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3506 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3507 call.GetDocumentation() |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3508 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3509 .SetSummary("Get tags of instances") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3510 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3511 " whose Orthanc identifier is provided in the URL") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3512 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3513 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3514 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3515 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3516 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3517 return; |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3518 } |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3519 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3520 ServerContext& context = OrthancRestApi::GetContext(call); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3521 std::string publicId = call.GetUriComponent("id", ""); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3522 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3523 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3524 std::set<DicomTag> ignoreTagLength; |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3525 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3526 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3527 // Retrieve all the instances of this patient/study/series |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3528 typedef std::list<std::string> Instances; |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3529 Instances instances; |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3530 |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3531 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3532 |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3533 Json::Value result = Json::objectValue; |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3534 |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3535 for (Instances::const_iterator it = instances.begin(); |
1303 | 3536 it != instances.end(); ++it) |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3537 { |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3538 Json::Value full; |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3539 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3540 |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3541 if (format != DicomToJsonFormat_Full) |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3542 { |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3543 Json::Value simplified; |
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
3544 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3545 result[*it] = simplified; |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3546 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3547 else |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3548 { |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3549 result[*it] = full; |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3550 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3551 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3552 |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3553 call.GetOutput().AnswerJson(result); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3554 } |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3555 |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3556 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3557 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3558 template <enum ResourceType start, |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3559 enum ResourceType end> |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3560 static void GetParentResource(RestApiGetCall& call) |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3561 { |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3562 assert(start > end); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3563 |
4415 | 3564 if (call.IsDocumentation()) |
3565 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3566 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3567 OrthancRestApi::DocumentRequestedTags(call); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3568 |
4415 | 3569 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
3570 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
3571 call.GetDocumentation() | |
3572 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
3573 .SetSummary("Get parent " + parent) | |
3574 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3575 resource + " whose Orthanc identifier is provided in the URL") |
4415 | 3576 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
3577 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
3578 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
3579 return; | |
3580 } | |
3581 | |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3582 ServerIndex& index = OrthancRestApi::GetIndex(call); |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3583 |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3584 std::set<DicomTag> requestedTags; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3585 OrthancRestApi::GetRequestedTags(requestedTags, call); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3586 |
1281
8dac11c78d71
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diff
changeset
|
3587 std::string current = call.GetUriComponent("id", ""); |
8dac11c78d71
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3588 ResourceType currentType = start; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3589 while (currentType > end) |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3590 { |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3591 std::string parent; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3592 if (!index.LookupParent(parent, current)) |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3593 { |
8dac11c78d71
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diff
changeset
|
3594 // Error that could happen if the resource gets deleted by |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3595 // another concurrent call |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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diff
changeset
|
3596 return; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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1276
diff
changeset
|
3597 } |
8dac11c78d71
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diff
changeset
|
3598 |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3599 current = parent; |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3600 currentType = GetParentResourceType(currentType); |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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diff
changeset
|
3601 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3602 |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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diff
changeset
|
3603 assert(currentType == end); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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1276
diff
changeset
|
3604 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3605 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3606 |
4554 | 3607 Json::Value resource; |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3608 if (OrthancRestApi::GetContext(call).ExpandResource(resource, current, end, format, requestedTags, true /* allowStorageAccess */)) |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3609 { |
4554 | 3610 call.GetOutput().AnswerJson(resource); |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3611 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3612 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3613 |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3614 |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3615 static void ExtractPdf(RestApiGetCall& call) |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3616 { |
4407 | 3617 if (call.IsDocumentation()) |
3618 { | |
3619 call.GetDocumentation() | |
3620 .SetTag("Instances") | |
3621 .SetSummary("Get embedded PDF") | |
3622 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
3623 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
3624 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
3625 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
3626 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
3627 return; | |
3628 } | |
3629 | |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3630 const std::string id = call.GetUriComponent("id", ""); |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3631 std::string pdf; |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3632 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3633 |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3634 if (locker.GetDicom().ExtractPdf(pdf)) |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3635 { |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3636 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3637 return; |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3638 } |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3639 } |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3640 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3641 |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3642 static void OrderSlices(RestApiGetCall& call) |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3643 { |
4421 | 3644 if (call.IsDocumentation()) |
3645 { | |
3646 call.GetDocumentation() | |
3647 .SetDeprecated() | |
3648 .SetTag("Series") | |
3649 .SetSummary("Order the slices") | |
3650 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
3651 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
3652 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
3653 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
3654 "Ordered list of paths to DICOM instances") | |
3655 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
3656 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
3657 "in the case of multiframe images.") | |
3658 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
3659 "Same information as the `Slices` field, but in a compact form") | |
3660 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
3661 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3662 .SetTruncatedJsonHttpGetSample("https://orthanc.uclouvain.be/demo/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); |
4421 | 3663 return; |
3664 } | |
3665 | |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3666 const std::string id = call.GetUriComponent("id", ""); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3667 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3668 ServerIndex& index = OrthancRestApi::GetIndex(call); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3669 SliceOrdering ordering(index, id); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3670 |
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3671 Json::Value result; |
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3672 ordering.Format(result); |
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3673 call.GetOutput().AnswerJson(result); |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3674 } |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3675 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3676 |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3677 static void GetInstanceHeader(RestApiGetCall& call) |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3678 { |
4404 | 3679 if (call.IsDocumentation()) |
3680 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3681 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
4404 | 3682 call.GetDocumentation() |
3683 .SetTag("Instances") | |
3684 .SetSummary("Get DICOM meta-header") | |
3685 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
3686 "combines hexadecimal tags with human-readable description.") | |
3687 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
3688 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3689 .SetHttpGetSample("https://orthanc.uclouvain.be/demo/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); |
4404 | 3690 return; |
3691 } | |
3692 | |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3693 ServerContext& context = OrthancRestApi::GetContext(call); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3694 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3695 std::string publicId = call.GetUriComponent("id", ""); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3696 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3697 std::string dicomContent; |
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
3698 context.ReadDicomForHeader(dicomContent, publicId); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3699 |
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3700 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3701 // speed up things here |
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3702 |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3703 ParsedDicomFile dicom(dicomContent); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3704 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3705 Json::Value header; |
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3706 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3707 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3708 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3709 } |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3710 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3711 |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3712 static void InvalidateTags(RestApiPostCall& call) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3713 { |
4420 | 3714 if (call.IsDocumentation()) |
3715 { | |
3716 call.GetDocumentation() | |
3717 .SetTag("System") | |
3718 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
3719 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
3720 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
3721 "This is notably useful after changes to the `Dictionary` configuration option. " | |
5432
59e3b6f8c5be
migration to UCLouvain servers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5427
diff
changeset
|
3722 "https://orthanc.uclouvain.be/book/faq/orthanc-storage.html#storage-area"); |
4420 | 3723 return; |
3724 } | |
3725 | |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3726 ServerIndex& index = OrthancRestApi::GetIndex(call); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3727 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3728 // Loop over the instances, grouping them by parent studies so as |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3729 // to avoid large memory consumption |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3730 std::list<std::string> studies; |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3731 index.GetAllUuids(studies, ResourceType_Study); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3732 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3733 for (std::list<std::string>::const_iterator |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3734 study = studies.begin(); study != studies.end(); ++study) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3735 { |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3736 std::list<std::string> instances; |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3737 index.GetChildInstances(instances, *study); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3738 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3739 for (std::list<std::string>::const_iterator |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3740 instance = instances.begin(); instance != instances.end(); ++instance) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3741 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3742 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3743 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3744 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3745 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3746 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3747 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3748 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3749 |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3750 void DocumentReconstructFilesField(RestApiPostCall& call) |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3751 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3752 call.GetDocumentation() |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3753 .SetRequestField(RECONSTRUCT_FILES, RestApiCallDocumentation::Type_Boolean, |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3754 "Also reconstruct the files of the resources (e.g: apply IngestTranscoding, StorageCompression). " |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3755 "'false' by default. (New in Orthanc 1.11.0)", false); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3756 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3757 |
4994 | 3758 bool GetReconstructFilesField(const RestApiPostCall& call) |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3759 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3760 bool reconstructFiles = false; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3761 Json::Value request; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3762 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3763 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(RECONSTRUCT_FILES)) // allow "" payload to keep backward compatibility |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3764 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3765 if (!request[RECONSTRUCT_FILES].isBool()) |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3766 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3767 throw OrthancException(ErrorCode_BadFileFormat, |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3768 "The field " + std::string(RECONSTRUCT_FILES) + " must contain a Boolean"); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3769 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3770 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3771 reconstructFiles = request[RECONSTRUCT_FILES].asBool(); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3772 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3773 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3774 return reconstructFiles; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3775 } |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3776 |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3777 template <enum ResourceType type> |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3778 static void ReconstructResource(RestApiPostCall& call) |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3779 { |
4420 | 3780 if (call.IsDocumentation()) |
3781 { | |
3782 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
3783 call.GetDocumentation() | |
3784 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3785 .SetSummary("Reconstruct tags & optionally files of " + resource) |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3786 .SetDescription("Reconstruct the main DICOM tags in DB of the " + resource + " whose Orthanc identifier is provided " |
4420 | 3787 "in the URL. This is useful if child studies/series/instances have inconsistent values for " |
3788 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
3789 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
3790 "parsed again, and the Orthanc index will be updated accordingly.") | |
3791 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3792 DocumentReconstructFilesField(call); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3793 |
4420 | 3794 return; |
3795 } | |
3796 | |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3797 ServerContext& context = OrthancRestApi::GetContext(call); |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3798 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", ""), GetReconstructFilesField(call)); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3799 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3800 } |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3801 |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3802 |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3803 static void ReconstructAllResources(RestApiPostCall& call) |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3804 { |
4420 | 3805 if (call.IsDocumentation()) |
3806 { | |
3807 call.GetDocumentation() | |
3808 .SetTag("System") | |
3809 .SetSummary("Reconstruct all the index") | |
3810 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
3811 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
3812 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3813 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated. " |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3814 "If you have a large database to process, it is advised to use the Housekeeper plugin to perform " |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3815 "this action resource by resource"); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3816 DocumentReconstructFilesField(call); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3817 |
4420 | 3818 return; |
3819 } | |
3820 | |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3821 ServerContext& context = OrthancRestApi::GetContext(call); |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3822 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3823 std::list<std::string> studies; |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3824 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3825 bool reconstructFiles = GetReconstructFilesField(call); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3826 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3827 for (std::list<std::string>::const_iterator |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3828 study = studies.begin(); study != studies.end(); ++study) |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3829 { |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3830 ServerToolbox::ReconstructResource(context, *study, reconstructFiles); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3831 } |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3832 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3833 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3834 } |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3835 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3836 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3837 static void GetBulkChildren(std::set<std::string>& target, |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3838 ServerIndex& index, |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3839 const std::set<std::string>& source) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3840 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3841 target.clear(); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3842 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3843 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3844 it = source.begin(); it != source.end(); ++it) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3845 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3846 std::list<std::string> children; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3847 index.GetChildren(children, *it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3848 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3849 for (std::list<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3850 child = children.begin(); child != children.end(); ++child) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3851 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3852 target.insert(*child); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3853 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3854 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3855 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3856 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3857 |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3858 static void AddMetadata(Json::Value& target, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3859 ServerIndex& index, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3860 const std::string& resource, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3861 ResourceType level) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3862 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3863 target = Json::objectValue; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3864 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3865 std::map<MetadataType, std::string> content; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3866 index.GetAllMetadata(content, resource, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3867 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3868 for (std::map<MetadataType, std::string>::const_iterator |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3869 it = content.begin(); it != content.end(); ++it) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3870 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3871 target[EnumerationToString(it->first)] = it->second; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3872 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3873 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3874 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3875 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3876 static void BulkContent(RestApiPostCall& call) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3877 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3878 static const char* const LEVEL = "Level"; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3879 static const char* const METADATA = "Metadata"; |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3880 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3881 if (call.IsDocumentation()) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3882 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3883 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3884 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3885 call.GetDocumentation() |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3886 .SetTag("System") |
4879 | 3887 .SetSummary("Describe a set of resources") |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3888 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3889 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3890 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3891 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3892 "`Instance`). Orthanc will loop over the items inside `Resources`, and explore upward or " |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3893 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3894 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3895 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3896 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3897 "whose identifiers are provided in the `Resources` field, in one single call."); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3898 return; |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3899 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3900 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3901 Json::Value request; |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3902 if (!call.ParseJsonRequest(request) || |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3903 request.type() != Json::objectValue) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3904 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3905 throw OrthancException(ErrorCode_BadRequest, |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3906 "The body must contain a JSON object"); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3907 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3908 else |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3909 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3910 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3911 |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3912 bool metadata = true; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3913 if (request.isMember(METADATA)) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3914 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3915 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3916 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3917 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3918 ServerIndex& index = OrthancRestApi::GetIndex(call); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3919 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3920 Json::Value answer = Json::arrayValue; |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3921 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3922 if (request.isMember(LEVEL)) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3923 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3924 // Complex case: Need to explore the DICOM hierarchy |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3925 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3926 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3927 std::set<std::string> resources; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3928 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3929 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3930 std::set<std::string> interest; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3931 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3932 assert(ResourceType_Patient < ResourceType_Study && |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3933 ResourceType_Study < ResourceType_Series && |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3934 ResourceType_Series < ResourceType_Instance); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3935 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3936 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3937 it = resources.begin(); it != resources.end(); ++it) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3938 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3939 ResourceType type; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3940 if (index.LookupResourceType(type, *it)) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3941 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3942 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3943 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3944 // This resource is already from the level of interest |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3945 interest.insert(*it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3946 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3947 else if (type < level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3948 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3949 // Need to explore children |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3950 std::set<std::string> current; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3951 current.insert(*it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3952 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3953 for (;;) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3954 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3955 std::set<std::string> children; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3956 GetBulkChildren(children, index, current); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3957 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3958 type = GetChildResourceType(type); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3959 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3960 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3961 for (std::set<std::string>::const_iterator |
4716 | 3962 it2 = children.begin(); it2 != children.end(); ++it2) |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3963 { |
4716 | 3964 interest.insert(*it2); |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3965 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3966 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3967 break; // done |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3968 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3969 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3970 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3971 current.swap(children); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3972 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3973 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3974 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3975 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3976 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3977 // Need to explore parents |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3978 std::string current = *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3979 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3980 for (;;) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3981 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3982 std::string parent; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3983 if (index.LookupParent(parent, current)) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3984 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3985 type = GetParentResourceType(type); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3986 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3987 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3988 interest.insert(parent); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3989 break; // done |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3990 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3991 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3992 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3993 current = parent; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3994 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3995 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3996 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3997 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3998 break; // The resource has been deleted during the exploration |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3999 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4000 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4001 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4002 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4003 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4004 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4005 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4006 } |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4007 } |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4008 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4009 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4010 it = interest.begin(); it != interest.end(); ++it) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4011 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4012 Json::Value item; |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
4013 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
4014 |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
4015 if (OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4016 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4017 if (metadata) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4018 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4019 AddMetadata(item[METADATA], index, *it, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4020 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4021 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4022 answer.append(item); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4023 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4024 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4025 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4026 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4027 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4028 // Simple case: We return the queried resources as such |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4029 std::list<std::string> resources; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4030 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4031 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4032 for (std::list<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4033 it = resources.begin(); it != resources.end(); ++it) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4034 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4035 ResourceType level; |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4036 Json::Value item; |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
4037 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
4038 |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4039 if (index.LookupResourceType(level, *it) && |
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
4040 OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4041 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4042 if (metadata) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4043 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4044 AddMetadata(item[METADATA], index, *it, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4045 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
4046 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4047 answer.append(item); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4048 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4049 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4050 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4051 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4052 } |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4053 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4054 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4055 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4056 call.GetOutput().AnswerJson(answer); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4057 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4058 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4059 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4060 |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4061 static void BulkDelete(RestApiPostCall& call) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4062 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4063 if (call.IsDocumentation()) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4064 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4065 call.GetDocumentation() |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4066 .SetTag("System") |
4879 | 4067 .SetSummary("Delete a set of resources") |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4068 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
4069 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4070 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4071 "whose identifiers are provided in the `Resources` field."); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4072 return; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4073 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4074 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4075 ServerContext& context = OrthancRestApi::GetContext(call); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4076 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4077 Json::Value request; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4078 if (!call.ParseJsonRequest(request) || |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4079 request.type() != Json::objectValue) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4080 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4081 throw OrthancException(ErrorCode_BadRequest, |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4082 "The body must contain a JSON object"); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4083 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4084 else |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4085 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4086 std::set<std::string> resources; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4087 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4088 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4089 for (std::set<std::string>::const_iterator |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4090 it = resources.begin(); it != resources.end(); ++it) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4091 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4092 ResourceType type; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4093 Json::Value remainingAncestor; // Unused |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4094 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4095 if (!context.GetIndex().LookupResourceType(type, *it) || |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4096 !context.DeleteResource(remainingAncestor, *it, type)) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4097 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4098 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4099 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4100 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4101 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4102 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4103 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4104 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4105 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4106 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4107 void OrthancRestApi::RegisterResources() |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4108 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4109 Register("/instances", ListResources<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4110 Register("/patients", ListResources<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4111 Register("/series", ListResources<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4112 Register("/studies", ListResources<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4113 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4114 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4115 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4116 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4117 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4118 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4119 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4120 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4121 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4122 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4123 Register("/instances/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4124 Register("/patients/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4125 Register("/studies/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4126 Register("/series/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4127 |
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4128 Register("/patients/{id}/shared-tags", GetSharedTags); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4129 Register("/series/{id}/shared-tags", GetSharedTags); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4130 Register("/studies/{id}/shared-tags", GetSharedTags); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
4131 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4132 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4133 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4134 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4135 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4136 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
4137 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4138 Register("/instances/{id}/file", GetInstanceFile); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4139 Register("/instances/{id}/export", ExportInstanceFile); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4140 Register("/instances/{id}/tags", GetInstanceTags); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4141 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4142 Register("/instances/{id}/frames", ListFrames); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4143 |
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
4144 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4145 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4146 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4147 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4148 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4149 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4150 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4151 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4152 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4153 Register("/instances/{id}/frames/{frame}/numpy", GetNumpyFrame); // New in Orthanc 1.10.0 |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
4154 Register("/instances/{id}/pdf", ExtractPdf); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4155 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4156 Register("/instances/{id}/rendered", GetRenderedFrame); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4157 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4158 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4159 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4160 Register("/instances/{id}/matlab", GetMatlabImage); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4161 Register("/instances/{id}/header", GetInstanceHeader); |
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4162 Register("/instances/{id}/numpy", GetNumpyInstance); // New in Orthanc 1.10.0 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4163 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4164 Register("/patients/{id}/protected", IsProtectedPatient); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4165 Register("/patients/{id}/protected", SetPatientProtection); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4166 |
4409 | 4167 std::vector<std::string> resourceTypes; |
4168 resourceTypes.push_back("patients"); | |
4169 resourceTypes.push_back("studies"); | |
4170 resourceTypes.push_back("series"); | |
4171 resourceTypes.push_back("instances"); | |
4172 | |
4173 for (size_t i = 0; i < resourceTypes.size(); i++) | |
4174 { | |
4175 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
4176 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
4177 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
4178 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4179 |
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4180 // New in Orthanc 1.12.0 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4181 Register("/" + resourceTypes[i] + "/{id}/labels", ListLabels); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4182 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", GetLabel); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4183 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", RemoveLabel); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4184 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", AddLabel); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4185 |
4409 | 4186 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
4187 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
4188 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
4189 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
4190 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
4191 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
4192 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
4193 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
4194 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
4195 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
4196 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
4197 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
4198 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
4199 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/info", GetAttachmentInfo); |
4409 | 4200 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); |
4201 } | |
782 | 4202 |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4203 Register("/tools/invalidate-tags", InvalidateTags); |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4204 Register("/tools/lookup", Lookup); |
1354 | 4205 Register("/tools/find", Find); |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4206 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4207 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4208 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4209 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4210 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4211 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4212 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4213 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4214 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4215 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4216 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4217 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4218 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4219 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4220 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4221 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4222 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4223 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4224 |
782 | 4225 Register("/instances/{id}/content/*", GetRawContent); |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4226 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4227 Register("/series/{id}/ordered-slices", OrderSlices); |
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4228 Register("/series/{id}/numpy", GetNumpySeries); // New in Orthanc 1.10.0 |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4229 |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4230 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4231 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4232 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4233 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4234 Register("/tools/reconstruct", ReconstructAllResources); |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4235 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4236 Register("/tools/bulk-content", BulkContent); |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4237 Register("/tools/bulk-delete", BulkDelete); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4238 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4239 } |