Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 5426:c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
| author | Alain Mazy <am@osimis.io> |
|---|---|
| date | Thu, 16 Nov 2023 16:09:04 +0100 |
| parents | 630d0195e3bb |
| children | 111e21b4f8bc |
| rev | line source |
|---|---|
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU General Public License |
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "../PrecompiledHeadersServer.h" |
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24 #include "OrthancRestApi.h" |
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25 |
| 4045 | 26 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
| 27 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
| 28 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
| 29 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
| 30 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
| 31 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
| 32 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
| 33 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
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34 #include "../../../OrthancFramework/Sources/Images/NumpyWriter.h" |
| 4045 | 35 #include "../../../OrthancFramework/Sources/Logging.h" |
| 36 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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37 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
| 4045 | 38 |
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39 #include "../OrthancConfiguration.h" |
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40 #include "../Search/DatabaseLookup.h" |
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41 #include "../ServerContext.h" |
| 2131 | 42 #include "../ServerToolbox.h" |
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43 #include "../SliceOrdering.h" |
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44 |
| 3687 | 45 // This "include" is mandatory for Release builds using Linux Standard Base |
| 46 #include <boost/math/special_functions/round.hpp> | |
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47 #include <boost/shared_ptr.hpp> |
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48 |
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49 /** |
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50 * This semaphore is used to limit the number of concurrent HTTP |
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51 * requests on CPU-intensive routes of the REST API, in order to |
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52 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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53 **/ |
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54 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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55 |
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56 |
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57 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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58 |
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59 static const char* const IGNORE_LENGTH = "ignore-length"; |
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60 static const char* const RECONSTRUCT_FILES = "ReconstructFiles"; |
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61 |
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62 |
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63 namespace Orthanc |
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64 { |
| 4415 | 65 static std::string GetDocumentationSampleResource(ResourceType type) |
| 66 { | |
| 67 switch (type) | |
| 68 { | |
| 69 case Orthanc::ResourceType_Instance: | |
| 70 return "https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2"; | |
| 71 break; | |
| 72 | |
| 73 case Orthanc::ResourceType_Series: | |
| 74 return "https://demo.orthanc-server.com/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; | |
| 75 break; | |
| 76 | |
| 77 case Orthanc::ResourceType_Study: | |
| 78 return "https://demo.orthanc-server.com/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; | |
| 79 break; | |
| 80 | |
| 81 case Orthanc::ResourceType_Patient: | |
| 82 return "https://demo.orthanc-server.com/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; | |
| 83 break; | |
| 84 | |
| 85 default: | |
| 86 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 87 } | |
| 88 } | |
| 89 | |
| 90 | |
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91 static void AnswerDicomAsJson(RestApiCall& call, |
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92 const Json::Value& dicom, |
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93 DicomToJsonFormat mode) |
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94 { |
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95 if (mode != DicomToJsonFormat_Full) |
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96 { |
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97 Json::Value simplified; |
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98 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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99 call.GetOutput().AnswerJson(simplified); |
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100 } |
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101 else |
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102 { |
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103 call.GetOutput().AnswerJson(dicom); |
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104 } |
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105 } |
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106 |
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107 |
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108 static void ParseSetOfTags(std::set<DicomTag>& target, |
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109 const RestApiGetCall& call, |
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110 const std::string& argument) |
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111 { |
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112 target.clear(); |
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113 |
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114 if (call.HasArgument(argument)) |
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115 { |
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116 std::vector<std::string> tags; |
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117 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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118 |
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119 for (size_t i = 0; i < tags.size(); i++) |
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120 { |
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121 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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122 } |
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123 } |
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124 } |
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125 |
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126 |
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127 // List all the patients, studies, series or instances ---------------------- |
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128 |
| 1354 | 129 static void AnswerListOfResources(RestApiOutput& output, |
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130 ServerContext& context, |
| 1354 | 131 const std::list<std::string>& resources, |
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132 const std::map<std::string, std::string>& instancesIds, // optional: the id of an instance for each found resource. |
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133 const std::map<std::string, boost::shared_ptr<DicomMap> >& resourcesMainDicomTags, // optional: all tags read from DB for a resource (current level and upper levels) |
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134 const std::map<std::string, boost::shared_ptr<Json::Value> >& resourcesDicomAsJson, // optional: the dicom-as-json for each resource |
| 1354 | 135 ResourceType level, |
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136 bool expand, |
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137 DicomToJsonFormat format, |
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138 const std::set<DicomTag>& requestedTags, |
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139 bool allowStorageAccess) |
| 1354 | 140 { |
| 141 Json::Value answer = Json::arrayValue; | |
| 142 | |
| 143 for (std::list<std::string>::const_iterator | |
| 1384 | 144 resource = resources.begin(); resource != resources.end(); ++resource) |
| 1354 | 145 { |
| 146 if (expand) | |
| 147 { | |
| 4554 | 148 Json::Value expanded; |
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149 |
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150 std::map<std::string, std::string>::const_iterator instanceId = instancesIds.find(*resource); |
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151 if (instanceId != instancesIds.end()) // if it is found in instancesIds, it is also in resourcesDicomAsJson and mainDicomTags |
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152 { |
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153 // reuse data already collected before (e.g during lookup) |
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154 std::map<std::string, boost::shared_ptr<DicomMap> >::const_iterator mainDicomTags = resourcesMainDicomTags.find(*resource); |
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155 std::map<std::string, boost::shared_ptr<Json::Value> >::const_iterator dicomAsJson = resourcesDicomAsJson.find(*resource); |
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156 |
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157 context.ExpandResource(expanded, *resource, |
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158 *(mainDicomTags->second.get()), |
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159 instanceId->second, |
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160 dicomAsJson->second.get(), |
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161 level, format, requestedTags, allowStorageAccess); |
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162 } |
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163 else |
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164 { |
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165 context.ExpandResource(expanded, *resource, level, format, requestedTags, allowStorageAccess); |
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166 } |
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167 |
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168 if (expanded.type() == Json::objectValue) |
| 1354 | 169 { |
| 4554 | 170 answer.append(expanded); |
| 1354 | 171 } |
| 172 } | |
| 173 else | |
| 174 { | |
| 175 answer.append(*resource); | |
| 176 } | |
| 177 } | |
| 178 | |
| 179 output.AnswerJson(answer); | |
| 180 } | |
| 181 | |
| 182 | |
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183 static void AnswerListOfResources(RestApiOutput& output, |
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184 ServerContext& context, |
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185 const std::list<std::string>& resources, |
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186 ResourceType level, |
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187 bool expand, |
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188 DicomToJsonFormat format, |
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189 const std::set<DicomTag>& requestedTags, |
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190 bool allowStorageAccess) |
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191 { |
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192 std::map<std::string, std::string> unusedInstancesIds; |
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193 std::map<std::string, boost::shared_ptr<DicomMap> > unusedResourcesMainDicomTags; |
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194 std::map<std::string, boost::shared_ptr<Json::Value> > unusedResourcesDicomAsJson; |
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195 |
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196 AnswerListOfResources(output, context, resources, unusedInstancesIds, unusedResourcesMainDicomTags, unusedResourcesDicomAsJson, level, expand, format, requestedTags, allowStorageAccess); |
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197 } |
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198 |
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199 |
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200 template <enum ResourceType resourceType> |
| 974 | 201 static void ListResources(RestApiGetCall& call) |
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202 { |
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203 if (call.IsDocumentation()) |
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204 { |
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205 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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206 OrthancRestApi::DocumentRequestedTags(call); |
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207 |
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208 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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209 call.GetDocumentation() |
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210 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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211 .SetSummary("List the available " + resources) |
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212 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
| 4403 | 213 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
| 214 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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215 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
| 4403 | 216 "If present, retrieve detailed information about the individual " + resources, false) |
| 4404 | 217 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 218 "about the reported " + resources + " (if `expand` argument is provided)") | |
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219 .SetHttpGetSample("https://demo.orthanc-server.com/" + resources + "?since=0&limit=2", true); |
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220 return; |
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221 } |
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222 |
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223 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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224 ServerContext& context = OrthancRestApi::GetContext(call); |
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225 |
| 1354 | 226 std::list<std::string> result; |
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227 |
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228 std::set<DicomTag> requestedTags; |
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229 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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230 |
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231 if (call.HasArgument("limit") || |
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232 call.HasArgument("since")) |
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233 { |
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234 if (!call.HasArgument("limit")) |
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235 { |
| 2955 | 236 throw OrthancException(ErrorCode_BadRequest, |
| 237 "Missing \"limit\" argument for GET request against: " + | |
| 238 call.FlattenUri()); | |
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239 } |
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240 |
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241 if (!call.HasArgument("since")) |
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242 { |
| 2955 | 243 throw OrthancException(ErrorCode_BadRequest, |
| 244 "Missing \"since\" argument for GET request against: " + | |
| 245 call.FlattenUri()); | |
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246 } |
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247 |
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248 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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249 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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250 index.GetAllUuids(result, resourceType, since, limit); |
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251 } |
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252 else |
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253 { |
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254 index.GetAllUuids(result, resourceType); |
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255 } |
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256 |
|
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257 AnswerListOfResources(call.GetOutput(), context, result, resourceType, call.HasArgument("expand") && call.GetBooleanArgument("expand", true), |
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258 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), |
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259 requestedTags, |
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260 true /* allowStorageAccess */); |
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261 } |
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262 |
| 4409 | 263 |
| 264 | |
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265 template <enum ResourceType resourceType> |
| 974 | 266 static void GetSingleResource(RestApiGetCall& call) |
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267 { |
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268 if (call.IsDocumentation()) |
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269 { |
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270 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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271 OrthancRestApi::DocumentRequestedTags(call); |
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272 |
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273 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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274 call.GetDocumentation() |
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275 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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276 .SetSummary("Get information about some " + resource) |
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277 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 278 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 4409 | 279 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
| 280 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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281 return; |
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282 } |
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283 |
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284 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
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285 |
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286 std::set<DicomTag> requestedTags; |
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287 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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288 |
| 4554 | 289 Json::Value json; |
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290 if (OrthancRestApi::GetContext(call).ExpandResource( |
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291 json, call.GetUriComponent("id", ""), resourceType, format, requestedTags, true /* allowStorageAccess */)) |
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292 { |
| 4554 | 293 call.GetOutput().AnswerJson(json); |
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294 } |
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295 } |
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296 |
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297 template <enum ResourceType resourceType> |
| 974 | 298 static void DeleteSingleResource(RestApiDeleteCall& call) |
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299 { |
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300 if (call.IsDocumentation()) |
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301 { |
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302 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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303 call.GetDocumentation() |
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304 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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305 .SetSummary("Delete some " + resource) |
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306 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 307 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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308 return; |
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309 } |
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310 |
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311 Json::Value remainingAncestor; |
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312 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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313 { |
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314 call.GetOutput().AnswerJson(remainingAncestor); |
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315 } |
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316 } |
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317 |
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318 |
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319 // Get information about a single patient ----------------------------------- |
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320 |
| 974 | 321 static void IsProtectedPatient(RestApiGetCall& call) |
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322 { |
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323 if (call.IsDocumentation()) |
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324 { |
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325 call.GetDocumentation() |
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326 .SetTag("Patients") |
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327 .SetSummary("Is the patient protected against recycling?") |
| 4404 | 328 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
| 4403 | 329 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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330 return; |
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331 } |
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332 |
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333 std::string publicId = call.GetUriComponent("id", ""); |
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334 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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335 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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336 } |
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337 |
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338 |
| 974 | 339 static void SetPatientProtection(RestApiPutCall& call) |
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340 { |
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341 if (call.IsDocumentation()) |
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342 { |
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343 call.GetDocumentation() |
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344 .SetTag("Patients") |
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345 .SetSummary("Protect one patient against recycling") |
| 4403 | 346 .SetDescription("Check out configuration options `MaximumStorageSize` and `MaximumPatientCount`") |
| 4404 | 347 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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348 return; |
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349 } |
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350 |
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351 ServerContext& context = OrthancRestApi::GetContext(call); |
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352 |
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353 std::string publicId = call.GetUriComponent("id", ""); |
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354 |
|
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355 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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356 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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357 } |
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358 |
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359 |
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360 // Get information about a single instance ---------------------------------- |
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361 |
| 974 | 362 static void GetInstanceFile(RestApiGetCall& call) |
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363 { |
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364 static const char* const TRANSCODE = "transcode"; |
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365 |
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366 if (call.IsDocumentation()) |
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367 { |
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368 call.GetDocumentation() |
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369 .SetTag("Instances") |
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370 .SetSummary("Download DICOM") |
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371 .SetDescription("Download one DICOM instance") |
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372 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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373 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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374 .SetHttpGetArgument(TRANSCODE, RestApiCallDocumentation::Type_String, |
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375 "If present, the DICOM file will be transcoded to the provided " |
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376 "transfer syntax: https://book.orthanc-server.com/faq/transcoding.html", false) |
|
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377 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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378 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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379 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
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380 return; |
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381 } |
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382 |
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383 ServerContext& context = OrthancRestApi::GetContext(call); |
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384 |
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385 std::string publicId = call.GetUriComponent("id", ""); |
|
3203
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386 |
|
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387 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
|
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388 if (accept != call.GetHttpHeaders().end()) |
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389 { |
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390 // New in Orthanc 1.5.4 |
|
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391 try |
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392 { |
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393 MimeType mime = StringToMimeType(accept->second.c_str()); |
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394 |
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395 if (mime == MimeType_DicomWebJson || |
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396 mime == MimeType_DicomWebXml) |
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397 { |
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398 DicomWebJsonVisitor visitor; |
|
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399 |
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400 { |
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401 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
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402 locker.GetDicom().Apply(visitor); |
|
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403 } |
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404 |
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405 if (mime == MimeType_DicomWebJson) |
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406 { |
|
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407 std::string s = visitor.GetResult().toStyledString(); |
|
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408 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
|
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409 } |
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410 else |
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411 { |
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412 std::string xml; |
|
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413 visitor.FormatXml(xml); |
|
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414 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
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415 } |
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416 |
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417 return; |
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418 } |
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419 } |
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420 catch (OrthancException&) |
|
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421 { |
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422 } |
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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423 } |
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changeset
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424 |
|
5426
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
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diff
changeset
|
425 if (call.HasArgument(TRANSCODE)) |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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426 { |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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parents:
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diff
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|
427 std::string source; |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
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diff
changeset
|
428 std::string transcoded; |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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diff
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|
429 context.ReadDicom(source, publicId); |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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diff
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430 |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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diff
changeset
|
431 if (context.TranscodeWithCache(transcoded, source, publicId, GetTransferSyntax(call.GetArgument(TRANSCODE, "")))) |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
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432 { |
|
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diff
changeset
|
433 call.GetOutput().AnswerBuffer(transcoded, MimeType_Dicom); |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
5424
diff
changeset
|
434 } |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
435 } |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
436 else |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
437 { |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
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5424
diff
changeset
|
438 // return the attachment without any transcoding |
|
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StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
439 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
|
c65e036d649b
StorageCache is now storing transcoded instances + added ?transcode=... option to the /file route.
Alain Mazy <am@osimis.io>
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5424
diff
changeset
|
440 } |
|
751
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refactoring of OrthancRestApi
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diff
changeset
|
441 } |
|
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diff
changeset
|
442 |
|
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
443 |
| 974 | 444 static void ExportInstanceFile(RestApiPostCall& call) |
|
751
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|
445 { |
| 4421 | 446 if (call.IsDocumentation()) |
| 447 { | |
| 448 call.GetDocumentation() | |
| 449 .SetTag("Instances") | |
| 450 .SetSummary("Write DICOM onto filesystem") | |
|
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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5185
diff
changeset
|
451 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running. This is insecure for " |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
changeset
|
452 "Orthanc servers that are remotely accessible since one could overwrite any system file. " |
|
5275
8686476e9d12
fix inclusion of winsock.h
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parents:
5274
diff
changeset
|
453 "Since Orthanc 1.12.0, this route is disabled by default, but can be enabled using " |
|
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
454 "the `RestApiWriteToFileSystemEnabled` configuration option.") |
| 4421 | 455 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
| 456 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
| 457 return; | |
| 458 } | |
| 459 | |
|
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diff
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|
460 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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refactoring of OrthancRestApi
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diff
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|
461 |
|
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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diff
changeset
|
462 if (!context.IsRestApiWriteToFileSystemEnabled()) |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
changeset
|
463 { |
|
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New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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diff
changeset
|
464 LOG(ERROR) << "The URI /instances/../export is disallowed for security, " |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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diff
changeset
|
465 << "check your configuration option `RestApiWriteToFileSystemEnabled`"; |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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diff
changeset
|
466 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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diff
changeset
|
467 return; |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
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|
468 } |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
changeset
|
469 |
|
751
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parents:
diff
changeset
|
470 std::string publicId = call.GetUriComponent("id", ""); |
|
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refactoring of OrthancRestApi
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changeset
|
471 |
|
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parents:
diff
changeset
|
472 std::string dicom; |
| 2124 | 473 context.ReadDicom(dicom, publicId); |
|
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
474 |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
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parents:
1437
diff
changeset
|
475 std::string target; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
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parents:
1437
diff
changeset
|
476 call.BodyToString(target); |
| 2140 | 477 SystemToolbox::WriteFile(dicom, target); |
|
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
478 |
|
2908
9d277f8ad698
new enumeration: MimeType
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parents:
2905
diff
changeset
|
479 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
751
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diff
changeset
|
480 } |
|
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diff
changeset
|
481 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
482 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
483 template <DicomToJsonFormat format> |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
484 static void GetInstanceTagsInternal(RestApiGetCall& call) |
|
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
485 { |
|
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
486 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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487 |
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488 std::string publicId = call.GetUriComponent("id", ""); |
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489 |
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490 std::set<DicomTag> ignoreTagLength; |
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491 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
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492 |
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493 if (format != DicomToJsonFormat_Full || |
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494 !ignoreTagLength.empty()) |
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495 { |
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496 Json::Value full; |
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497 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
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498 AnswerDicomAsJson(call, full, format); |
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499 } |
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500 else |
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501 { |
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502 // This path allows one to avoid the JSON decoding if no |
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503 // simplification is asked, and if no "ignore-length" argument |
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504 // is present |
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505 Json::Value full; |
| 2127 | 506 context.ReadDicomAsJson(full, publicId); |
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507 call.GetOutput().AnswerJson(full); |
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508 } |
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509 } |
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510 |
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511 |
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512 static void GetInstanceTags(RestApiGetCall& call) |
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513 { |
| 4404 | 514 if (call.IsDocumentation()) |
| 515 { | |
|
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516 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 517 call.GetDocumentation() |
| 518 .SetTag("Instances") | |
| 519 .SetSummary("Get DICOM tags") | |
| 520 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
| 521 "combines hexadecimal tags with human-readable description.") | |
| 522 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
|
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523 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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524 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
| 4404 | 525 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
| 4415 | 526 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
| 4404 | 527 return; |
| 528 } | |
| 529 | |
|
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530 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
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531 { |
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532 case DicomToJsonFormat_Human: |
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533 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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534 break; |
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535 |
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536 case DicomToJsonFormat_Short: |
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537 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call); |
|
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538 break; |
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539 |
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540 case DicomToJsonFormat_Full: |
|
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541 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call); |
|
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542 break; |
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543 |
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544 default: |
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545 throw OrthancException(ErrorCode_InternalError); |
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546 } |
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547 } |
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548 |
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549 |
|
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550 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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551 { |
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552 if (call.IsDocumentation()) |
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553 { |
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554 call.GetDocumentation() |
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555 .SetTag("Instances") |
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556 .SetSummary("Get human-readable tags") |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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557 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
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558 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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559 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
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560 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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561 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
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562 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
|
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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563 return; |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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564 } |
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565 else |
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566 { |
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567 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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568 } |
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569 } |
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570 |
|
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571 |
| 974 | 572 static void ListFrames(RestApiGetCall& call) |
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573 { |
| 4414 | 574 if (call.IsDocumentation()) |
| 575 { | |
| 576 call.GetDocumentation() | |
| 577 .SetTag("Instances") | |
| 578 .SetSummary("List available frames") | |
| 579 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
| 580 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 581 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
| 582 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); | |
| 583 return; | |
| 584 } | |
| 585 | |
|
1950
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return a single raw frame from DICOM videos
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586 std::string publicId = call.GetUriComponent("id", ""); |
|
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587 |
|
1950
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return a single raw frame from DICOM videos
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changeset
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588 unsigned int numberOfFrames; |
|
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changeset
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589 |
|
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return a single raw frame from DICOM videos
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590 { |
|
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return a single raw frame from DICOM videos
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changeset
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591 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
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592 numberOfFrames = locker.GetDicom().GetFramesCount(); |
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593 } |
|
1950
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return a single raw frame from DICOM videos
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594 |
|
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return a single raw frame from DICOM videos
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changeset
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595 Json::Value result = Json::arrayValue; |
|
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diff
changeset
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596 for (unsigned int i = 0; i < numberOfFrames; i++) |
|
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597 { |
|
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598 result.append(i); |
|
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599 } |
|
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return a single raw frame from DICOM videos
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600 |
|
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return a single raw frame from DICOM videos
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diff
changeset
|
601 call.GetOutput().AnswerJson(result); |
|
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602 } |
|
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|
603 |
|
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refactoring of OrthancRestApi
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diff
changeset
|
604 |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
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|
605 namespace |
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606 { |
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607 class ImageToEncode |
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608 { |
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609 private: |
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610 std::unique_ptr<ImageAccessor>& image_; |
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611 ImageExtractionMode mode_; |
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612 bool invert_; |
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613 MimeType format_; |
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614 std::string answer_; |
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615 |
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616 public: |
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617 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
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618 ImageExtractionMode mode, |
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619 bool invert) : |
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620 image_(image), |
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621 mode_(mode), |
| 4205 | 622 invert_(invert), |
| 623 format_(MimeType_Binary) | |
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624 { |
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625 } |
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626 |
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627 void Answer(RestApiOutput& output) |
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628 { |
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629 output.AnswerBuffer(answer_, format_); |
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630 } |
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631 |
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632 void EncodeUsingPng() |
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633 { |
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634 format_ = MimeType_Png; |
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635 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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636 } |
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637 |
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638 void EncodeUsingPam() |
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639 { |
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640 format_ = MimeType_Pam; |
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641 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
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642 } |
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643 |
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644 void EncodeUsingJpeg(uint8_t quality) |
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645 { |
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646 format_ = MimeType_Jpeg; |
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647 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
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648 } |
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649 }; |
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650 |
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651 class EncodePng : public HttpContentNegociation::IHandler |
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652 { |
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653 private: |
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654 ImageToEncode& image_; |
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655 |
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656 public: |
| 4205 | 657 explicit EncodePng(ImageToEncode& image) : image_(image) |
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658 { |
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659 } |
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660 |
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661 virtual void Handle(const std::string& type, |
|
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662 const std::string& subtype, |
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663 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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664 { |
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665 assert(type == "image"); |
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666 assert(subtype == "png"); |
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667 image_.EncodeUsingPng(); |
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668 } |
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669 }; |
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670 |
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671 class EncodePam : public HttpContentNegociation::IHandler |
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672 { |
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673 private: |
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674 ImageToEncode& image_; |
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675 |
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676 public: |
| 4205 | 677 explicit EncodePam(ImageToEncode& image) : image_(image) |
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678 { |
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679 } |
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680 |
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681 virtual void Handle(const std::string& type, |
|
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682 const std::string& subtype, |
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683 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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684 { |
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685 assert(type == "image"); |
| 2780 | 686 assert(subtype == "x-portable-arbitrarymap"); |
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687 image_.EncodeUsingPam(); |
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688 } |
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689 }; |
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690 |
|
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691 class EncodeJpeg : public HttpContentNegociation::IHandler |
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692 { |
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693 private: |
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694 ImageToEncode& image_; |
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695 unsigned int quality_; |
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696 |
|
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697 public: |
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698 EncodeJpeg(ImageToEncode& image, |
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699 const RestApiGetCall& call) : |
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700 image_(image) |
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701 { |
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702 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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703 bool ok = false; |
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704 |
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705 try |
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706 { |
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707 quality_ = boost::lexical_cast<unsigned int>(v); |
| 1847 | 708 ok = (quality_ >= 1 && quality_ <= 100); |
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
709 } |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
710 catch (boost::bad_lexical_cast&) |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
711 { |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
712 } |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
713 |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
714 if (!ok) |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
715 { |
| 2955 | 716 throw OrthancException( |
| 717 ErrorCode_BadRequest, | |
| 718 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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parents:
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diff
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|
719 } |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
720 } |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
721 |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
722 virtual void Handle(const std::string& type, |
|
5338
78c59b02b121
accept parameters are now provided to HttpContentNegociation::IHandler::Handle()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5275
diff
changeset
|
723 const std::string& subtype, |
|
78c59b02b121
accept parameters are now provided to HttpContentNegociation::IHandler::Handle()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5275
diff
changeset
|
724 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
725 { |
|
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
726 assert(type == "image"); |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
727 assert(subtype == "jpeg"); |
|
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
728 image_.EncodeUsingJpeg(quality_); |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
729 } |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
730 }; |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
731 } |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
732 |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
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1773
diff
changeset
|
733 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
734 namespace |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
735 { |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
736 class IDecodedFrameHandler : public boost::noncopyable |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
737 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
738 public: |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
739 virtual ~IDecodedFrameHandler() |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
740 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
741 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
742 |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
743 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
744 virtual void Handle(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
745 std::unique_ptr<ImageAccessor>& decoded, |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
746 const ParsedDicomFile* dicom, |
|
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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4769
diff
changeset
|
747 unsigned int frame) = 0; |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
748 |
|
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skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
749 virtual bool RequiresDicomTags() const = 0; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
750 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
751 static void Apply(RestApiGetCall& call, |
|
4406
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
752 IDecodedFrameHandler& handler, |
|
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diff
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|
753 ImageExtractionMode mode /* for generation of documentation */, |
|
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diff
changeset
|
754 bool isRendered /* for generation of documentation */) |
|
3683
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parents:
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diff
changeset
|
755 { |
|
4406
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
756 if (call.IsDocumentation()) |
|
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
757 { |
|
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diff
changeset
|
758 std::string m; |
|
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parents:
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diff
changeset
|
759 if (!isRendered) |
|
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parents:
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diff
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|
760 { |
|
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diff
changeset
|
761 switch (mode) |
|
4cb9f66a1c7c
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diff
changeset
|
762 { |
|
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documenting generation of images
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parents:
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diff
changeset
|
763 case ImageExtractionMode_Preview: |
|
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parents:
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diff
changeset
|
764 m = "preview"; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
765 break; |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
766 case ImageExtractionMode_UInt8: |
|
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documenting generation of images
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diff
changeset
|
767 m = "uint8"; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
768 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
769 case ImageExtractionMode_UInt16: |
|
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parents:
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diff
changeset
|
770 m = "uint16"; |
|
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documenting generation of images
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parents:
4405
diff
changeset
|
771 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
772 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
773 m = "int16"; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
774 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
775 default: |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
776 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
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parents:
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diff
changeset
|
777 } |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
778 } |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
779 |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
780 std::string description; |
|
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diff
changeset
|
781 std::string verb = (isRendered ? "Render" : "Decode"); |
|
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diff
changeset
|
782 |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
783 if (call.HasUriComponent("frame")) |
|
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parents:
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diff
changeset
|
784 { |
|
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parents:
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diff
changeset
|
785 description = verb + " one frame of interest from the given DICOM instance."; |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
786 call.GetDocumentation() |
|
4cb9f66a1c7c
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diff
changeset
|
787 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
|
4cb9f66a1c7c
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parents:
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diff
changeset
|
788 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
4cb9f66a1c7c
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diff
changeset
|
789 } |
|
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parents:
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diff
changeset
|
790 else |
|
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parents:
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diff
changeset
|
791 { |
|
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parents:
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diff
changeset
|
792 description = verb + " the first frame of the given DICOM instance."; |
|
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diff
changeset
|
793 call.GetDocumentation() |
|
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diff
changeset
|
794 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
|
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diff
changeset
|
795 } |
|
4cb9f66a1c7c
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diff
changeset
|
796 |
|
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diff
changeset
|
797 if (isRendered) |
|
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parents:
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diff
changeset
|
798 { |
|
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diff
changeset
|
799 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
|
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diff
changeset
|
800 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
|
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diff
changeset
|
801 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
|
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diff
changeset
|
802 call.GetDocumentation() |
|
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diff
changeset
|
803 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
|
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parents:
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diff
changeset
|
804 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
|
4cb9f66a1c7c
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diff
changeset
|
805 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
|
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diff
changeset
|
806 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
|
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diff
changeset
|
807 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
|
4cb9f66a1c7c
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diff
changeset
|
808 } |
|
4cb9f66a1c7c
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diff
changeset
|
809 else |
|
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diff
changeset
|
810 { |
|
4cb9f66a1c7c
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diff
changeset
|
811 switch (mode) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
812 { |
|
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diff
changeset
|
813 case ImageExtractionMode_Preview: |
|
4cb9f66a1c7c
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diff
changeset
|
814 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
|
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diff
changeset
|
815 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
816 case ImageExtractionMode_UInt8: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
817 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
818 break; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
819 case ImageExtractionMode_UInt16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
820 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
821 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
822 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
823 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
|
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
824 "Negative values must be interpreted according to two's complement."); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
825 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
826 default: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
827 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
828 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
829 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
830 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
831 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
832 .SetTag("Instances") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
833 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
834 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
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parents:
4777
diff
changeset
|
835 .SetHttpGetArgument("returnUnsupportedImage", RestApiCallDocumentation::Type_Boolean, "Returns an unsupported.png placeholder image if unable to provide the image instead of returning a 415 HTTP error (defaults to false)", false) |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
836 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
837 .AddAnswerType(MimeType_Png, "PNG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
838 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
839 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
840 .SetDescription(description); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
841 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
842 return; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
843 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
844 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
845 ServerContext& context = OrthancRestApi::GetContext(call); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
846 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
847 std::string frameId = call.GetUriComponent("frame", "0"); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
848 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
849 unsigned int frame; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
850 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
851 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
852 frame = boost::lexical_cast<unsigned int>(frameId); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
853 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
854 catch (boost::bad_lexical_cast&) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
855 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
856 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
857 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
858 |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
859 std::unique_ptr<ImageAccessor> decoded; |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
860 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
861 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
862 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
863 std::string publicId = call.GetUriComponent("id", ""); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
864 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
865 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
866 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
867 if (decoded.get() == NULL) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
868 { |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
869 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
870 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
871 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
872 |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
873 if (handler.RequiresDicomTags()) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
874 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
875 /** |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
876 * Retrieve a summary of the DICOM tags, which is |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
877 * necessary to deal with MONOCHROME1 photometric |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
878 * interpretation, and with windowing parameters. |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
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parents:
3926
diff
changeset
|
879 **/ |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
880 ServerContext::DicomCacheLocker locker(context, publicId); |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
881 handler.Handle(call, decoded, &locker.GetDicom(), frame); |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
882 } |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
883 else |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
884 { |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
885 handler.Handle(call, decoded, NULL, frame); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
886 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
887 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
888 catch (OrthancException& e) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
889 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
890 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
891 e.GetErrorCode() == ErrorCode_UnknownResource) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
892 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
893 // The frame number is out of the range for this DICOM |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
894 // instance, the resource is not existent |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
895 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
896 else |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
897 { |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
898 if (call.HasArgument("returnUnsupportedImage")) |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
899 { |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
900 std::string root = ""; |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
901 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
902 { |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
903 root += "../"; |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
904 } |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
905 |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
906 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
907 } |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
908 else |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
909 { |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
910 call.GetOutput().SignalError(HttpStatus_415_UnsupportedMediaType); |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
911 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
912 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
913 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
914 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
915 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
916 } |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
917 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
918 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
919 static void DefaultHandler(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
920 std::unique_ptr<ImageAccessor>& decoded, |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
921 ImageExtractionMode mode, |
|
2cc34837d694
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|
922 bool invert) |
|
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|
923 { |
|
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924 ImageToEncode image(decoded, mode, invert); |
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925 |
|
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926 HttpContentNegociation negociation; |
|
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927 EncodePng png(image); |
|
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928 negociation.Register(MIME_PNG, png); |
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929 |
|
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930 EncodeJpeg jpeg(image, call); |
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931 negociation.Register(MIME_JPEG, jpeg); |
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932 |
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933 EncodePam pam(image); |
|
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934 negociation.Register(MIME_PAM, pam); |
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935 |
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936 if (negociation.Apply(call.GetHttpHeaders())) |
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937 { |
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938 image.Answer(call.GetOutput()); |
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939 } |
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940 } |
|
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941 }; |
|
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942 |
|
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943 |
|
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944 class GetImageHandler : public IDecodedFrameHandler |
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945 { |
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946 private: |
|
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947 ImageExtractionMode mode_; |
|
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948 |
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949 public: |
| 4205 | 950 explicit GetImageHandler(ImageExtractionMode mode) : |
|
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951 mode_(mode) |
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952 { |
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953 } |
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954 |
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955 virtual void Handle(RestApiGetCall& call, |
|
3712
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956 std::unique_ptr<ImageAccessor>& decoded, |
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957 const ParsedDicomFile* dicom, |
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958 unsigned int frame) ORTHANC_OVERRIDE |
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959 { |
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960 bool invert = false; |
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961 |
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962 if (mode_ == ImageExtractionMode_Preview) |
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963 { |
|
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964 if (dicom == NULL) |
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965 { |
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966 throw OrthancException(ErrorCode_InternalError); |
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|
967 } |
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968 |
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969 DicomMap tags; |
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|
970 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
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971 |
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|
972 DicomImageInformation info(tags); |
|
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973 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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974 } |
|
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975 |
|
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976 DefaultHandler(call, decoded, mode_, invert); |
|
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977 } |
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978 |
|
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979 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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980 { |
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981 return mode_ == ImageExtractionMode_Preview; |
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982 } |
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983 }; |
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984 |
|
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|
985 |
|
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|
986 class RenderedFrameHandler : public IDecodedFrameHandler |
|
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987 { |
|
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|
988 private: |
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|
989 static void GetUserArguments(double& windowWidth /* inout */, |
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990 double& windowCenter /* inout */, |
|
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|
991 unsigned int& argWidth, |
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992 unsigned int& argHeight, |
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|
993 bool& smooth, |
| 4205 | 994 const RestApiGetCall& call) |
|
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995 { |
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996 static const char* ARG_WINDOW_CENTER = "window-center"; |
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997 static const char* ARG_WINDOW_WIDTH = "window-width"; |
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998 static const char* ARG_WIDTH = "width"; |
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999 static const char* ARG_HEIGHT = "height"; |
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1000 static const char* ARG_SMOOTH = "smooth"; |
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1001 |
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|
1002 if (call.HasArgument(ARG_WINDOW_WIDTH) && |
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1003 !SerializationToolbox::ParseDouble(windowWidth, call.GetArgument(ARG_WINDOW_WIDTH, ""))) |
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1004 { |
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1005 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1006 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
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1007 } |
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1008 |
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1009 if (call.HasArgument(ARG_WINDOW_CENTER) && |
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|
1010 !SerializationToolbox::ParseDouble(windowCenter, call.GetArgument(ARG_WINDOW_CENTER, ""))) |
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1011 { |
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1012 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1013 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
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1014 } |
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1015 |
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1016 argWidth = 0; |
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1017 argHeight = 0; |
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1018 |
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1019 if (call.HasArgument(ARG_WIDTH)) |
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1020 { |
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1021 try |
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1022 { |
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1023 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
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1024 if (tmp < 0) |
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1025 { |
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1026 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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1027 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1028 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1029 else |
|
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diff
changeset
|
1030 { |
|
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1031 argWidth = static_cast<unsigned int>(tmp); |
|
3685
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1032 } |
|
2cc34837d694
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1033 } |
|
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parents:
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diff
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|
1034 catch (boost::bad_lexical_cast&) |
|
2cc34837d694
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1035 { |
|
2cc34837d694
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1036 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1037 "Bad value for argument: " + std::string(ARG_WIDTH)); |
|
3685
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1038 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1039 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1040 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1041 if (call.HasArgument(ARG_HEIGHT)) |
|
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|
1042 { |
|
2cc34837d694
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diff
changeset
|
1043 try |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1044 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1045 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
|
3685
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rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1046 if (tmp < 0) |
|
2cc34837d694
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diff
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|
1047 { |
|
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diff
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|
1048 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1049 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
|
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|
1050 } |
|
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|
1051 else |
|
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|
1052 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1053 argHeight = static_cast<unsigned int>(tmp); |
|
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|
1054 } |
|
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|
1055 } |
|
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|
1056 catch (boost::bad_lexical_cast&) |
|
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|
1057 { |
|
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|
1058 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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|
1059 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
|
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|
1060 } |
|
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|
1061 } |
|
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|
1062 |
|
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|
1063 smooth = false; |
|
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|
1064 |
|
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|
1065 if (call.HasArgument(ARG_SMOOTH)) |
|
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|
1066 { |
|
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4460
diff
changeset
|
1067 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
|
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|
1068 } |
|
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|
1069 } |
|
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|
1070 |
|
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1071 |
|
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|
1072 public: |
|
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|
1073 virtual void Handle(RestApiGetCall& call, |
|
3712
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replacing std::auto_ptr by std::unique_ptr
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|
1074 std::unique_ptr<ImageAccessor>& decoded, |
|
4777
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1075 const ParsedDicomFile* dicom, |
|
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|
1076 unsigned int frame) ORTHANC_OVERRIDE |
|
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|
1077 { |
|
4769
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
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4722
diff
changeset
|
1078 if (dicom == NULL) |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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diff
changeset
|
1079 { |
|
9da6ca57a977
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|
1080 throw OrthancException(ErrorCode_InternalError); |
|
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diff
changeset
|
1081 } |
|
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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4722
diff
changeset
|
1082 |
|
4777
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Support detection of windowing and rescale in Philips multiframe images
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|
1083 PhotometricInterpretation photometric; |
|
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Support detection of windowing and rescale in Philips multiframe images
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|
1084 const bool invert = (dicom->LookupPhotometricInterpretation(photometric) && |
|
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Support detection of windowing and rescale in Philips multiframe images
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|
1085 photometric == PhotometricInterpretation_Monochrome1); |
|
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1086 |
|
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
1087 double rescaleIntercept, rescaleSlope, windowCenter, windowWidth; |
|
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changeset
|
1088 dicom->GetRescale(rescaleIntercept, rescaleSlope, frame); |
|
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1089 dicom->GetDefaultWindowing(windowCenter, windowWidth, frame); |
|
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1090 |
|
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changeset
|
1091 unsigned int argWidth, argHeight; |
|
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|
1092 bool smooth; |
|
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|
1093 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
|
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|
1094 |
|
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changeset
|
1095 unsigned int targetWidth = decoded->GetWidth(); |
|
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|
1096 unsigned int targetHeight = decoded->GetHeight(); |
| 3686 | 1097 |
| 1098 if (decoded->GetWidth() != 0 && | |
| 1099 decoded->GetHeight() != 0) | |
| 1100 { | |
| 1101 float ratio = 1; | |
| 1102 | |
|
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|
1103 if (argWidth != 0 && |
|
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|
1104 argHeight != 0) |
| 3686 | 1105 { |
|
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|
1106 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
|
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|
1107 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
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|
1108 ratio = std::min(ratioX, ratioY); |
| 3686 | 1109 } |
|
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|
1110 else if (argWidth != 0) |
| 3686 | 1111 { |
|
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|
1112 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
| 3686 | 1113 } |
|
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|
1114 else if (argHeight != 0) |
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|
1115 { |
|
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1116 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
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|
1117 } |
|
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|
1118 |
|
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|
1119 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
|
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|
1120 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
| 3686 | 1121 } |
| 1122 | |
|
5054
255b02c68908
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
5048
diff
changeset
|
1123 if (decoded->GetFormat() == PixelFormat_RGB24 || decoded->GetFormat() == PixelFormat_RGB48) |
|
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1124 { |
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|
1125 if (targetWidth == decoded->GetWidth() && |
|
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|
1126 targetHeight == decoded->GetHeight()) |
|
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|
1127 { |
|
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|
1128 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
|
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1129 } |
|
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|
1130 else |
|
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|
1131 { |
|
3712
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changeset
|
1132 std::unique_ptr<ImageAccessor> resized( |
|
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changeset
|
1133 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
|
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changeset
|
1134 |
|
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changeset
|
1135 if (smooth && |
|
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changeset
|
1136 (targetWidth < decoded->GetWidth() || |
|
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|
1137 targetHeight < decoded->GetHeight())) |
|
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|
1138 { |
|
4065
d6362b2c4b61
export dcmdata in shared library, rounding in convolution tests
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parents:
4055
diff
changeset
|
1139 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
|
3685
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1140 } |
|
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1141 |
|
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|
1142 ImageProcessing::Resize(*resized, *decoded); |
|
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|
1143 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
|
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|
1144 } |
|
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|
1145 } |
| 3686 | 1146 else |
| 1147 { | |
|
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|
1148 // Grayscale image: (1) convert to Float32, (2) apply |
|
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|
1149 // windowing to get a Grayscale8, (3) possibly resize |
|
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1150 |
|
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|
1151 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
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1152 ImageProcessing::Convert(converted, *decoded); |
|
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1153 |
|
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1154 // Avoid divisions by zero |
|
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1155 if (windowWidth <= 1.0f) |
|
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1156 { |
|
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1157 windowWidth = 1; |
|
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1158 } |
|
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1159 |
|
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1160 if (std::abs(rescaleSlope) <= 0.0001) |
|
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1161 { |
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1162 rescaleSlope = 0.0001; |
|
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1163 } |
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1164 |
|
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1165 const double scaling = 255.0 * rescaleSlope / windowWidth; |
|
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1166 const double offset = (rescaleIntercept - windowCenter + windowWidth / 2.0) / rescaleSlope; |
|
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1167 |
|
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1168 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
|
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1169 ImageProcessing::ShiftScale(*rescaled, converted, static_cast<float>(offset), static_cast<float>(scaling), false); |
|
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1170 |
|
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1171 if (targetWidth == decoded->GetWidth() && |
|
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1172 targetHeight == decoded->GetHeight()) |
|
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1173 { |
|
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1174 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
|
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1175 } |
|
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1176 else |
|
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1177 { |
|
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1178 std::unique_ptr<ImageAccessor> resized( |
|
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1179 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
|
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|
1180 |
|
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|
1181 if (smooth && |
|
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1182 (targetWidth < decoded->GetWidth() || |
|
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1183 targetHeight < decoded->GetHeight())) |
|
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|
1184 { |
|
4065
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|
1185 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
|
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|
1186 } |
|
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|
1187 |
|
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|
1188 ImageProcessing::Resize(*resized, *rescaled); |
|
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1189 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
|
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1190 } |
| 3686 | 1191 } |
|
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1192 } |
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1193 |
|
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1194 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
|
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1195 { |
|
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1196 return true; |
|
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1197 } |
|
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1198 }; |
|
3600
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|
1199 } |
|
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|
1200 |
|
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1201 |
|
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|
1202 template <enum ImageExtractionMode mode> |
| 974 | 1203 static void GetImage(RestApiGetCall& call) |
|
751
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1204 { |
|
3926
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|
1205 Semaphore::Locker locker(throttlingSemaphore_); |
|
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|
1206 |
|
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|
1207 GetImageHandler handler(mode); |
|
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|
1208 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
|
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|
1209 } |
|
1906
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|
1210 |
|
1826
ac5b0b4e2434
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1211 |
|
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|
1212 static void GetRenderedFrame(RestApiGetCall& call) |
|
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1213 { |
|
3926
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|
1214 Semaphore::Locker locker(throttlingSemaphore_); |
|
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1215 |
|
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|
1216 RenderedFrameHandler handler; |
|
4406
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|
1217 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
|
751
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|
1218 } |
|
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|
1219 |
|
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1220 |
|
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1221 static void DocumentSharedNumpy(RestApiGetCall& call) |
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1222 { |
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1223 call.GetDocumentation() |
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1224 .SetUriArgument("id", "Orthanc identifier of the DICOM resource of interest") |
|
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1225 .SetHttpGetArgument("compress", RestApiCallDocumentation::Type_Boolean, "Compress the file as `.npz`", false) |
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1226 .SetHttpGetArgument("rescale", RestApiCallDocumentation::Type_Boolean, |
|
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1227 "On grayscale images, apply the rescaling and return floating-point values", false) |
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1228 .AddAnswerType(MimeType_PlainText, "Numpy file: https://numpy.org/devdocs/reference/generated/numpy.lib.format.html"); |
|
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1229 } |
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1230 |
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1231 |
|
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1232 namespace |
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1233 { |
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1234 class NumpyVisitor : public boost::noncopyable |
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1235 { |
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1236 private: |
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|
1237 bool rescale_; |
|
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1238 unsigned int depth_; |
|
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1239 unsigned int currentDepth_; |
| 4858 | 1240 unsigned int width_; |
|
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1241 unsigned int height_; |
|
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1242 PixelFormat format_; |
|
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|
1243 ChunkedBuffer buffer_; |
|
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1244 |
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|
1245 public: |
|
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1246 NumpyVisitor(unsigned int depth /* can be zero if 2D frame */, |
|
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1247 bool rescale) : |
|
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download of numpy arrays from the REST API
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|
1248 rescale_(rescale), |
|
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|
1249 depth_(depth), |
| 4858 | 1250 currentDepth_(0), |
| 1251 width_(0), // dummy initialization | |
| 1252 height_(0), // dummy initialization | |
| 1253 format_(PixelFormat_Grayscale8) // dummy initialization | |
|
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1254 { |
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1255 } |
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|
1256 |
| 4858 | 1257 void WriteFrame(const ParsedDicomFile& dicom, |
|
4834
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1258 unsigned int frame) |
|
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1259 { |
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1260 std::unique_ptr<ImageAccessor> decoded(dicom.DecodeFrame(frame)); |
|
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1261 |
|
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|
1262 if (decoded.get() == NULL) |
|
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1263 { |
|
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1264 throw OrthancException(ErrorCode_NotImplemented, "Cannot decode DICOM instance"); |
|
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1265 } |
|
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1266 |
|
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1267 if (currentDepth_ == 0) |
|
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1268 { |
|
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1269 width_ = decoded->GetWidth(); |
|
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1270 height_ = decoded->GetHeight(); |
|
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1271 format_ = decoded->GetFormat(); |
|
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1272 } |
|
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1273 else if (width_ != decoded->GetWidth() || |
|
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|
1274 height_ != decoded->GetHeight()) |
|
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1275 { |
|
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1276 throw OrthancException(ErrorCode_IncompatibleImageSize, "The size of the frames varies across the instance(s)"); |
|
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1277 } |
|
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1278 else if (format_ != decoded->GetFormat()) |
|
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1279 { |
|
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|
1280 throw OrthancException(ErrorCode_IncompatibleImageFormat, "The pixel format of the frames varies across the instance(s)"); |
|
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1281 } |
|
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1282 |
|
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|
1283 if (rescale_ && |
|
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|
1284 decoded->GetFormat() != PixelFormat_RGB24) |
|
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1285 { |
|
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1286 if (currentDepth_ == 0) |
|
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1287 { |
|
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|
1288 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, PixelFormat_Float32); |
|
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1289 } |
|
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|
1290 |
|
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|
1291 double rescaleIntercept, rescaleSlope; |
|
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|
1292 dicom.GetRescale(rescaleIntercept, rescaleSlope, frame); |
|
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1293 |
|
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|
1294 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
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|
1295 ImageProcessing::Convert(converted, *decoded); |
|
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|
1296 ImageProcessing::ShiftScale2(converted, static_cast<float>(rescaleIntercept), static_cast<float>(rescaleSlope), false); |
|
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1297 |
|
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|
1298 NumpyWriter::WritePixels(buffer_, converted); |
|
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1299 } |
|
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1300 else |
|
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1301 { |
|
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1302 if (currentDepth_ == 0) |
|
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1303 { |
|
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|
1304 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, format_); |
|
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1305 } |
|
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|
1306 |
|
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|
1307 NumpyWriter::WritePixels(buffer_, *decoded); |
|
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1308 } |
|
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1309 |
|
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|
1310 currentDepth_ ++; |
|
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1311 } |
|
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1312 |
|
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|
1313 void Answer(RestApiOutput& output, |
|
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1314 bool compress) |
|
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1315 { |
|
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1316 if ((depth_ == 0 && currentDepth_ != 1) || |
|
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1317 (depth_ != 0 && currentDepth_ != depth_)) |
|
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1318 { |
|
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|
1319 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
|
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1320 } |
|
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1321 else |
|
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1322 { |
|
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1323 std::string answer; |
|
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|
1324 NumpyWriter::Finalize(answer, buffer_, compress); |
|
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|
1325 output.AnswerBuffer(answer, MimeType_Binary); |
|
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1326 } |
|
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|
1327 } |
|
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1328 }; |
|
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1329 } |
|
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1330 |
|
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1331 |
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|
1332 static void GetNumpyFrame(RestApiGetCall& call) |
|
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1333 { |
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1334 if (call.IsDocumentation()) |
|
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1335 { |
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|
1336 DocumentSharedNumpy(call); |
|
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1337 call.GetDocumentation() |
|
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1338 .SetTag("Instances") |
|
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1339 .SetSummary("Decode frame for numpy") |
|
4836
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1340 .SetDescription("Decode one frame of interest from the given DICOM instance, for use with numpy in Python. " |
|
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1341 "The numpy array has 3 dimensions: (height, width, color channel).") |
|
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1342 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
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1343 } |
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1344 else |
|
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1345 { |
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1346 const std::string instanceId = call.GetUriComponent("id", ""); |
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1347 const bool compress = call.GetBooleanArgument("compress", false); |
|
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1348 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
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1349 |
|
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|
1350 uint32_t frame; |
|
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1351 if (!SerializationToolbox::ParseUnsignedInteger32(frame, call.GetUriComponent("frame", "0"))) |
|
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1352 { |
|
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|
1353 throw OrthancException(ErrorCode_ParameterOutOfRange, "Expected an unsigned integer for the \"frame\" argument"); |
|
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1354 } |
|
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1355 |
|
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|
1356 NumpyVisitor visitor(0 /* no depth, 2D frame */, rescale); |
|
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|
1357 |
|
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1358 { |
|
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|
1359 Semaphore::Locker throttling(throttlingSemaphore_); |
|
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|
1360 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
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1361 |
|
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|
1362 visitor.WriteFrame(locker.GetDicom(), frame); |
|
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|
1363 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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4831
diff
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|
1364 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1365 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1366 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1367 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1368 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1369 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1370 static void GetNumpyInstance(RestApiGetCall& call) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1371 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1372 if (call.IsDocumentation()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1373 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1374 DocumentSharedNumpy(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1375 call.GetDocumentation() |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1376 .SetTag("Instances") |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
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|
1377 .SetSummary("Decode instance for numpy") |
|
4836
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
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4834
diff
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|
1378 .SetDescription("Decode the given DICOM instance, for use with numpy in Python. " |
|
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1379 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1380 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1381 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1382 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1383 const std::string instanceId = call.GetUriComponent("id", ""); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1384 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1385 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1386 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1387 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1388 Semaphore::Locker throttling(throttlingSemaphore_); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1389 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1390 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1391 const unsigned int depth = locker.GetDicom().GetFramesCount(); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1392 if (depth == 0) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1393 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1394 throw OrthancException(ErrorCode_BadFileFormat, "Empty DICOM instance"); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1395 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1396 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1397 NumpyVisitor visitor(depth, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1398 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1399 for (unsigned int frame = 0; frame < depth; frame++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1400 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1401 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1402 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1403 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1404 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1405 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1406 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1407 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1408 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1409 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1410 static void GetNumpySeries(RestApiGetCall& call) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1411 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1412 if (call.IsDocumentation()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1413 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1414 DocumentSharedNumpy(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1415 call.GetDocumentation() |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1416 .SetTag("Series") |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1417 .SetSummary("Decode series for numpy") |
|
4836
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1418 .SetDescription("Decode the given DICOM series, for use with numpy in Python. " |
|
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1419 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1420 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1421 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1422 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1423 const std::string seriesId = call.GetUriComponent("id", ""); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1424 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1425 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1426 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1427 Semaphore::Locker throttling(throttlingSemaphore_); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1428 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1429 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1430 SliceOrdering ordering(index, seriesId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1431 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1432 unsigned int depth = 0; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1433 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1434 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1435 depth += ordering.GetFramesCount(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1436 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1437 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1438 ServerContext& context = OrthancRestApi::GetContext(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1439 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1440 NumpyVisitor visitor(depth, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1441 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1442 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1443 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1444 const std::string& instanceId = ordering.GetInstanceId(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1445 unsigned int framesCount = ordering.GetFramesCount(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1446 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1447 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1448 ServerContext::DicomCacheLocker locker(context, instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1449 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1450 for (unsigned int frame = 0; frame < framesCount; frame++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1451 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1452 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1453 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1454 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1455 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1456 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1457 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1458 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1459 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1460 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1461 |
| 974 | 1462 static void GetMatlabImage(RestApiGetCall& call) |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1463 { |
| 4414 | 1464 if (call.IsDocumentation()) |
| 1465 { | |
| 1466 std::string description; | |
| 1467 | |
| 1468 if (call.HasUriComponent("frame")) | |
| 1469 { | |
| 1470 description = "Decode one frame of interest from the given DICOM instance"; | |
| 1471 call.GetDocumentation() | |
| 1472 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
| 1473 } | |
| 1474 else | |
| 1475 { | |
| 1476 description = "Decode the first frame of the given DICOM instance."; | |
| 1477 } | |
| 1478 | |
| 1479 call.GetDocumentation() | |
| 1480 .SetTag("Instances") | |
| 1481 .SetSummary("Decode frame for Matlab") | |
| 1482 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
| 1483 "https://book.orthanc-server.com/faq/matlab.html") | |
| 1484 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 1485 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
| 1486 return; | |
| 1487 } | |
| 1488 | |
|
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3816
diff
changeset
|
1489 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3816
diff
changeset
|
1490 |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1491 ServerContext& context = OrthancRestApi::GetContext(call); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1492 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1493 std::string frameId = call.GetUriComponent("frame", "0"); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1494 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1495 unsigned int frame; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1496 try |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1497 { |
|
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1498 frame = boost::lexical_cast<unsigned int>(frameId); |
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1499 } |
|
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1500 catch (boost::bad_lexical_cast&) |
|
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1501 { |
|
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1502 return; |
|
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1503 } |
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1504 |
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|
1505 std::string publicId = call.GetUriComponent("id", ""); |
|
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1506 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
|
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1507 |
|
3928
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1508 if (decoded.get() == NULL) |
|
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1509 { |
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1510 throw OrthancException(ErrorCode_NotImplemented, |
|
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1511 "Cannot decode DICOM instance with ID: " + publicId); |
|
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1512 } |
|
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1513 else |
|
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1514 { |
|
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1515 std::string result; |
|
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1516 decoded->ToMatlabString(result); |
|
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1517 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
|
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1518 } |
|
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1519 } |
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1520 |
|
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1521 |
|
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|
1522 template <bool GzipCompression> |
|
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1523 static void GetRawFrame(RestApiGetCall& call) |
|
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1524 { |
| 4408 | 1525 if (call.IsDocumentation()) |
| 1526 { | |
| 1527 call.GetDocumentation() | |
| 1528 .SetTag("Instances") | |
| 1529 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
| 1530 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
| 1531 "bypassing image decoding. This is notably useful to access the source files " | |
| 1532 "in compressed transfer syntaxes." + | |
| 1533 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
|
4424
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1534 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
| 4408 | 1535 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
| 1536 | |
| 1537 if (GzipCompression) | |
| 1538 { | |
| 1539 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
| 1540 } | |
| 1541 else | |
| 1542 { | |
| 1543 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
| 1544 } | |
| 1545 return; | |
| 1546 } | |
| 1547 | |
|
1924
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|
1548 std::string frameId = call.GetUriComponent("frame", "0"); |
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1549 |
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|
1550 unsigned int frame; |
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1551 try |
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1552 { |
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1553 frame = boost::lexical_cast<unsigned int>(frameId); |
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1554 } |
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|
1555 catch (boost::bad_lexical_cast&) |
|
1924
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1556 { |
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1557 return; |
|
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1558 } |
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1559 |
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1560 std::string publicId = call.GetUriComponent("id", ""); |
|
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1561 std::string raw; |
|
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1562 MimeType mime; |
|
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1563 |
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1564 { |
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1565 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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|
1566 locker.GetDicom().GetRawFrame(raw, mime, frame); |
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1567 } |
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1568 |
|
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1569 if (GzipCompression) |
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1570 { |
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|
1571 GzipCompressor gzip; |
|
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|
1572 std::string compressed; |
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|
1573 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
|
2908
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|
1574 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
|
2408
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1575 } |
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1576 else |
|
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1577 { |
|
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|
1578 call.GetOutput().AnswerBuffer(raw, mime); |
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|
1579 } |
|
1924
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1580 } |
|
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1581 |
|
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1582 |
| 974 | 1583 static void GetResourceStatistics(RestApiGetCall& call) |
|
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1584 { |
| 4418 | 1585 if (call.IsDocumentation()) |
| 1586 { | |
| 1587 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1588 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1589 call.GetDocumentation() | |
| 1590 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1591 .SetSummary("Get " + r + " statistics") | |
| 1592 .SetDescription("Get statistics about the given " + r) | |
| 1593 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1594 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
| 1595 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1596 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1597 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
| 1598 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1599 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1600 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1601 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
| 1602 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
| 1603 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
| 1604 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1605 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1606 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1607 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1608 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1609 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1610 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1611 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
| 1612 | |
| 1613 switch (t) | |
| 1614 { | |
| 1615 // Do NOT add "break" below this point! | |
| 1616 case ResourceType_Patient: | |
| 1617 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
| 1618 "Number of child studies within this " + r); | |
| 1619 | |
| 1620 case ResourceType_Study: | |
| 1621 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
| 1622 "Number of child series within this " + r); | |
| 1623 | |
| 1624 case ResourceType_Series: | |
| 1625 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
| 1626 "Number of child instances within this " + r); | |
| 1627 | |
| 1628 case ResourceType_Instance: | |
| 1629 default: | |
| 1630 break; | |
| 1631 } | |
| 1632 | |
| 1633 return; | |
| 1634 } | |
| 1635 | |
|
3174
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1636 static const uint64_t MEGA_BYTES = 1024 * 1024; |
|
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1637 |
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1638 std::string publicId = call.GetUriComponent("id", ""); |
|
3174
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1639 |
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1640 ResourceType type; |
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1641 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
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1642 unsigned int countStudies, countSeries, countInstances; |
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1643 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
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1644 type, diskSize, uncompressedSize, countStudies, countSeries, |
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1645 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
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1646 |
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1647 Json::Value result = Json::objectValue; |
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1648 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1649 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1650 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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1651 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
|
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1652 |
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|
1653 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
|
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|
1654 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
|
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primitives to collect metrics in Orthanc
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|
1655 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
|
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primitives to collect metrics in Orthanc
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|
1656 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
|
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1657 |
|
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primitives to collect metrics in Orthanc
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|
1658 switch (type) |
|
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primitives to collect metrics in Orthanc
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|
1659 { |
|
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primitives to collect metrics in Orthanc
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1660 // Do NOT add "break" below this point! |
|
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primitives to collect metrics in Orthanc
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|
1661 case ResourceType_Patient: |
|
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primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1662 result["CountStudies"] = countStudies; |
|
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primitives to collect metrics in Orthanc
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|
1663 |
|
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primitives to collect metrics in Orthanc
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|
1664 case ResourceType_Study: |
|
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primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1665 result["CountSeries"] = countSeries; |
|
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|
1666 |
|
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|
1667 case ResourceType_Series: |
|
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primitives to collect metrics in Orthanc
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|
1668 result["CountInstances"] = countInstances; |
|
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|
1669 |
|
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|
1670 case ResourceType_Instance: |
|
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|
1671 default: |
|
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primitives to collect metrics in Orthanc
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|
1672 break; |
|
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primitives to collect metrics in Orthanc
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|
1673 } |
|
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|
1674 |
|
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|
1675 call.GetOutput().AnswerJson(result); |
|
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|
1676 } |
|
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|
1677 |
|
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|
1678 |
|
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|
1679 |
|
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|
1680 // Handling of metadata ----------------------------------------------------- |
|
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|
1681 |
| 4205 | 1682 static void CheckValidResourceType(const RestApiCall& call) |
|
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|
1683 { |
|
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New metadata automatically computed at the series level: "RemoteAET"
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|
1684 assert(!call.GetFullUri().empty()); |
| 4409 | 1685 const std::string resourceType = call.GetFullUri() [0]; |
|
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|
1686 StringToResourceType(resourceType.c_str()); |
|
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|
1687 } |
|
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|
1688 |
|
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|
1689 |
| 974 | 1690 static void ListMetadata(RestApiGetCall& call) |
|
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|
1691 { |
| 4414 | 1692 if (call.IsDocumentation()) |
| 1693 { | |
| 1694 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1695 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1696 call.GetDocumentation() | |
| 1697 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1698 .SetSummary("List metadata") | |
| 1699 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
| 1700 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1701 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
| 1702 "If present, also retrieve the value of the individual metadata", false) | |
|
5274
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Added option "?numeric" if listing metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1703 .SetHttpGetArgument("numeric", RestApiCallDocumentation::Type_String, |
|
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Added option "?numeric" if listing metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1704 "If present, use the numeric identifier of the metadata instead of its symbolic name", false) |
| 4414 | 1705 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " |
| 1706 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
| 1707 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
| 1708 return; | |
| 1709 } | |
| 1710 | |
|
4460
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New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1711 assert(!call.GetFullUri().empty()); |
| 4554 | 1712 const std::string publicId = call.GetUriComponent("id", ""); |
| 1713 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
|
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testing replay of transactions
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|
1714 |
|
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|
1715 typedef std::map<MetadataType, std::string> Metadata; |
|
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|
1716 |
|
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diff
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|
1717 Metadata metadata; |
| 4554 | 1718 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
|
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diff
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|
1719 |
|
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2704
diff
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|
1720 Json::Value result; |
|
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1721 |
|
5274
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|
1722 bool isNumeric = call.HasArgument("numeric"); |
|
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|
1723 |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
1724 if (call.HasArgument("expand") && call.GetBooleanArgument("expand", true)) |
|
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|
1725 { |
|
2726
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diff
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|
1726 result = Json::objectValue; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1727 |
|
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|
1728 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
|
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|
1729 { |
|
5274
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|
1730 std::string key; |
|
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|
1731 if (isNumeric) |
|
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|
1732 { |
|
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|
1733 key = boost::lexical_cast<std::string>(it->first); |
|
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|
1734 } |
|
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Added option "?numeric" if listing metadata
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|
1735 else |
|
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|
1736 { |
|
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Added option "?numeric" if listing metadata
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|
1737 key = EnumerationToString(it->first); |
|
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Added option "?numeric" if listing metadata
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|
1738 } |
|
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Added option "?numeric" if listing metadata
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changeset
|
1739 |
|
3187
4bbadcd03966
refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
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3174
diff
changeset
|
1740 result[key] = it->second; |
|
5274
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Added option "?numeric" if listing metadata
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|
1741 } |
|
2726
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|
1742 } |
|
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|
1743 else |
|
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|
1744 { |
|
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diff
changeset
|
1745 result = Json::arrayValue; |
|
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|
1746 |
|
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4514
diff
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|
1747 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
|
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|
1748 { |
|
5274
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|
1749 if (isNumeric) |
|
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|
1750 { |
|
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|
1751 result.append(it->first); |
|
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|
1752 } |
|
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|
1753 else |
|
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Added option "?numeric" if listing metadata
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|
1754 { |
|
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changeset
|
1755 result.append(EnumerationToString(it->first)); |
|
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|
1756 } |
|
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|
1757 } |
|
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|
1758 } |
|
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changeset
|
1759 |
|
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|
1760 call.GetOutput().AnswerJson(result); |
|
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|
1761 } |
|
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changeset
|
1762 |
|
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|
1763 |
| 4657 | 1764 static void SetStringContentETag(const RestApiOutput& output, |
| 1765 int64_t revision, | |
| 1766 const std::string& value) | |
|
4640
66109d24d26e
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|
1767 { |
|
66109d24d26e
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changeset
|
1768 std::string md5; |
|
66109d24d26e
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changeset
|
1769 Toolbox::ComputeMD5(md5, value); |
|
66109d24d26e
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changeset
|
1770 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
|
66109d24d26e
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changeset
|
1771 output.GetLowLevelOutput().AddHeader("ETag", etag); |
|
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|
1772 } |
|
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|
1773 |
|
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|
1774 |
| 4657 | 1775 static void SetBufferContentETag(const RestApiOutput& output, |
|
4640
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changeset
|
1776 int64_t revision, |
|
66109d24d26e
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changeset
|
1777 const void* data, |
|
66109d24d26e
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changeset
|
1778 size_t size) |
|
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1779 { |
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1780 std::string md5; |
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1781 Toolbox::ComputeMD5(md5, data, size); |
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1782 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1783 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1784 } |
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1785 |
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1786 |
| 4657 | 1787 static void SetAttachmentETag(const RestApiOutput& output, |
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1788 int64_t revision, |
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1789 const FileInfo& info) |
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1790 { |
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1791 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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1792 info.GetUncompressedMD5() + "\""); |
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1793 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1794 } |
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1795 |
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1796 |
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1797 static std::string GetMD5(const std::string& value) |
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1798 { |
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1799 std::string md5; |
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1800 Toolbox::ComputeMD5(md5, value); |
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1801 return md5; |
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1802 } |
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1803 |
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1804 |
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1805 static bool GetRevisionHeader(int64_t& revision /* out */, |
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1806 std::string& md5 /* out */, |
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1807 const RestApiCall& call, |
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1808 const std::string& header) |
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1809 { |
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1810 std::string lower; |
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1811 Toolbox::ToLowerCase(lower, header); |
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1812 |
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1813 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1814 if (found == call.GetHttpHeaders().end()) |
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1815 { |
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1816 return false; |
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1817 } |
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1818 else |
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1819 { |
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1820 std::string value = Toolbox::StripSpaces(found->second); |
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1821 Toolbox::RemoveSurroundingQuotes(value); |
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1822 |
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1823 try |
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1824 { |
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1825 size_t comma = value.find('-'); |
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1826 if (comma != std::string::npos) |
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1827 { |
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1828 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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1829 md5 = value.substr(comma + 1); |
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1830 return true; |
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1831 } |
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1832 } |
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1833 catch (boost::bad_lexical_cast&) |
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1834 { |
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1835 } |
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1836 |
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1837 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1838 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
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1839 } |
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1840 } |
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1841 |
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1842 |
| 974 | 1843 static void GetMetadata(RestApiGetCall& call) |
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1844 { |
| 4414 | 1845 if (call.IsDocumentation()) |
| 1846 { | |
| 1847 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1848 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1849 call.GetDocumentation() | |
| 1850 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1851 .SetSummary("Get metadata") | |
| 1852 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
| 1853 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1854 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1855 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1856 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1857 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4414 | 1858 return; |
| 1859 } | |
| 1860 | |
|
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1861 assert(!call.GetFullUri().empty()); |
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1862 const std::string publicId = call.GetUriComponent("id", ""); |
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1863 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1864 |
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1865 std::string name = call.GetUriComponent("name", ""); |
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1866 MetadataType metadata = StringToMetadata(name); |
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1867 |
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1868 std::string value; |
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1869 int64_t revision; |
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1870 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1871 { |
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1872 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
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1873 |
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1874 int64_t userRevision; |
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1875 std::string userMD5; |
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1876 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1877 userRevision == revision && |
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1878 userMD5 == GetMD5(value)) |
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1879 { |
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1880 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1881 } |
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1882 else |
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1883 { |
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1884 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1885 } |
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1886 } |
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1887 } |
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1888 |
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1889 |
| 974 | 1890 static void DeleteMetadata(RestApiDeleteCall& call) |
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1891 { |
| 4414 | 1892 if (call.IsDocumentation()) |
| 1893 { | |
| 1894 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1895 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1896 call.GetDocumentation() | |
| 1897 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1898 .SetSummary("Delete metadata") | |
| 1899 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
| 1900 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
| 1901 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
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1902 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
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1903 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
|
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1904 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4414 | 1905 return; |
| 1906 } | |
| 1907 | |
|
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1908 CheckValidResourceType(call); |
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1909 const std::string publicId = call.GetUriComponent("id", ""); |
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1910 |
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1911 std::string name = call.GetUriComponent("name", ""); |
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1912 MetadataType metadata = StringToMetadata(name); |
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1913 |
|
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1914 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
|
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1915 { |
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1916 bool found; |
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1917 int64_t revision; |
|
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1918 std::string md5; |
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1919 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
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1920 { |
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1921 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
|
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1922 } |
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1923 else |
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1924 { |
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1925 OrthancConfiguration::ReaderLock lock; |
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1926 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1927 { |
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1928 throw OrthancException(ErrorCode_Revision, |
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1929 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
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1930 } |
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1931 else |
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1932 { |
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1933 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
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1934 } |
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1935 } |
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1936 |
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1937 if (found) |
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1938 { |
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1939 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1940 } |
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1941 else |
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1942 { |
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1943 throw OrthancException(ErrorCode_UnknownResource); |
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1944 } |
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1945 } |
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1946 else |
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1947 { |
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1948 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1949 } |
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1950 } |
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1951 |
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1952 |
| 974 | 1953 static void SetMetadata(RestApiPutCall& call) |
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1954 { |
| 4414 | 1955 if (call.IsDocumentation()) |
| 1956 { | |
| 1957 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1958 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1959 call.GetDocumentation() | |
| 1960 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1961 .SetSummary("Set metadata") | |
| 1962 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
| 1963 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
| 1964 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1965 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
|
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1966 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
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1967 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
| 4414 | 1968 return; |
| 1969 } | |
| 1970 | |
|
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1971 CheckValidResourceType(call); |
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|
1972 |
|
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|
1973 std::string publicId = call.GetUriComponent("id", ""); |
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|
1974 std::string name = call.GetUriComponent("name", ""); |
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|
1975 MetadataType metadata = StringToMetadata(name); |
|
1446
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|
1976 |
|
8dc80ba768aa
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|
1977 std::string value; |
|
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|
1978 call.BodyToString(value); |
|
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|
1979 |
|
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|
1980 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
|
751
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changeset
|
1981 { |
|
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|
1982 int64_t oldRevision; |
|
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|
1983 std::string oldMD5; |
|
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|
1984 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
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|
1985 |
|
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|
1986 if (!hasOldRevision) |
|
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|
1987 { |
|
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|
1988 OrthancConfiguration::ReaderLock lock; |
|
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|
1989 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
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|
1990 { |
|
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|
1991 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
|
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|
1992 // the actual value of "oldRevision" if the metadata is |
|
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|
1993 // inexistent as expected |
|
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|
1994 hasOldRevision = true; |
|
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|
1995 oldRevision = -1; // dummy value |
|
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|
1996 oldMD5.clear(); // dummy value |
|
4623
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|
1997 } |
|
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|
1998 } |
|
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changeset
|
1999 |
|
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changeset
|
2000 int64_t newRevision; |
|
4640
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changeset
|
2001 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
|
66109d24d26e
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changeset
|
2002 hasOldRevision, oldRevision, oldMD5); |
|
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changeset
|
2003 |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
changeset
|
2004 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2005 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
751
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
2006 } |
|
2128
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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diff
changeset
|
2007 else |
|
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2127
diff
changeset
|
2008 { |
|
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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|
2009 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
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|
2010 } |
|
751
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diff
changeset
|
2011 } |
|
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diff
changeset
|
2012 |
|
5197fd35333c
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parents:
diff
changeset
|
2013 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2014 |
|
5221
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2015 // Handling of labels ------------------------------------------------------- |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
2016 |
|
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2017 static void ListLabels(RestApiGetCall& call) |
|
d0f7c742d397
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parents:
5200
diff
changeset
|
2018 { |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
2019 if (call.IsDocumentation()) |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
2020 { |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
2021 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
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5200
diff
changeset
|
2022 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
2023 call.GetDocumentation() |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2024 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
5275
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
2025 .SetSummary("List labels") |
|
8686476e9d12
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2026 .SetDescription("Get the labels that are associated with the given " + r + " (new in Orthanc 1.12.0)") |
|
5221
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diff
changeset
|
2027 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2028 .AddAnswerType(MimeType_Json, "JSON array containing the names of the labels") |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2029 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/labels", true); |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2030 return; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2031 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2032 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2033 assert(!call.GetFullUri().empty()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2034 const std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2035 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2036 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2037 std::set<std::string> labels; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2038 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2039 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2040 Json::Value result = Json::arrayValue; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2041 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2042 for (std::set<std::string>::const_iterator it = labels.begin(); it != labels.end(); ++it) |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2043 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2044 result.append(*it); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2045 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2046 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2047 call.GetOutput().AnswerJson(result); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2048 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2049 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2050 |
|
d0f7c742d397
started implementation of labels
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diff
changeset
|
2051 static void GetLabel(RestApiGetCall& call) |
|
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started implementation of labels
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diff
changeset
|
2052 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2053 if (call.IsDocumentation()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2054 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2055 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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started implementation of labels
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diff
changeset
|
2056 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2057 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2058 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
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started implementation of labels
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diff
changeset
|
2059 .SetSummary("Test label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2060 .SetDescription("Test whether the " + r + " is associated with the given label") |
|
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started implementation of labels
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diff
changeset
|
2061 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
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started implementation of labels
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diff
changeset
|
2062 .SetUriArgument("label", "The label of interest") |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2063 .AddAnswerType(MimeType_PlainText, "Empty string is returned in the case of presence, error 404 in the case of absence"); |
|
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started implementation of labels
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diff
changeset
|
2064 return; |
|
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diff
changeset
|
2065 } |
|
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started implementation of labels
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diff
changeset
|
2066 |
|
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started implementation of labels
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diff
changeset
|
2067 CheckValidResourceType(call); |
|
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diff
changeset
|
2068 |
|
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started implementation of labels
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diff
changeset
|
2069 assert(!call.GetFullUri().empty()); |
|
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diff
changeset
|
2070 const std::string publicId = call.GetUriComponent("id", ""); |
|
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|
2071 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
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changeset
|
2072 |
|
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changeset
|
2073 std::string label = call.GetUriComponent("label", ""); |
|
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changeset
|
2074 |
|
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changeset
|
2075 std::set<std::string> labels; |
|
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changeset
|
2076 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
|
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diff
changeset
|
2077 |
|
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diff
changeset
|
2078 if (labels.find(label) != labels.end()) |
|
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diff
changeset
|
2079 { |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2080 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
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diff
changeset
|
2081 } |
|
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diff
changeset
|
2082 } |
|
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diff
changeset
|
2083 |
|
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diff
changeset
|
2084 |
|
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started implementation of labels
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diff
changeset
|
2085 static void AddLabel(RestApiPutCall& call) |
|
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started implementation of labels
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diff
changeset
|
2086 { |
|
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diff
changeset
|
2087 if (call.IsDocumentation()) |
|
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diff
changeset
|
2088 { |
|
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diff
changeset
|
2089 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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changeset
|
2090 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
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diff
changeset
|
2091 call.GetDocumentation() |
|
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changeset
|
2092 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
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started implementation of labels
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diff
changeset
|
2093 .SetSummary("Add label") |
|
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started implementation of labels
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diff
changeset
|
2094 .SetDescription("Associate a label with a " + r) |
|
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diff
changeset
|
2095 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
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diff
changeset
|
2096 .SetUriArgument("label", "The label to be added"); |
|
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diff
changeset
|
2097 return; |
|
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diff
changeset
|
2098 } |
|
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changeset
|
2099 |
|
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changeset
|
2100 CheckValidResourceType(call); |
|
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changeset
|
2101 |
|
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changeset
|
2102 std::string publicId = call.GetUriComponent("id", ""); |
|
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changeset
|
2103 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
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changeset
|
2104 |
|
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changeset
|
2105 std::string label = call.GetUriComponent("label", ""); |
|
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|
2106 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Add); |
|
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changeset
|
2107 |
|
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changeset
|
2108 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
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changeset
|
2109 } |
|
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changeset
|
2110 |
|
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changeset
|
2111 |
|
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changeset
|
2112 static void RemoveLabel(RestApiDeleteCall& call) |
|
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|
2113 { |
|
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|
2114 if (call.IsDocumentation()) |
|
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|
2115 { |
|
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|
2116 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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|
2117 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
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changeset
|
2118 call.GetDocumentation() |
|
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|
2119 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
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|
2120 .SetSummary("Remove label") |
|
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changeset
|
2121 .SetDescription("Remove a label associated with a " + r) |
|
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|
2122 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
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|
2123 .SetUriArgument("label", "The label to be removed"); |
|
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|
2124 return; |
|
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|
2125 } |
|
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changeset
|
2126 |
|
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changeset
|
2127 CheckValidResourceType(call); |
|
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|
2128 |
|
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diff
changeset
|
2129 std::string publicId = call.GetUriComponent("id", ""); |
|
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changeset
|
2130 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
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changeset
|
2131 |
|
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changeset
|
2132 std::string label = call.GetUriComponent("label", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2133 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Remove); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2134 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2135 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2136 } |
|
d0f7c742d397
started implementation of labels
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|
2137 |
|
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|
2138 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2139 // Handling of attached files ----------------------------------------------- |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2140 |
| 974 | 2141 static void ListAttachments(RestApiGetCall& call) |
|
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refactoring of OrthancRestApi
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|
2142 { |
| 4409 | 2143 if (call.IsDocumentation()) |
| 2144 { | |
| 2145 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2146 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2147 call.GetDocumentation() | |
| 2148 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2149 .SetSummary("List attachments") | |
| 2150 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
| 2151 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
4853
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2152 .SetHttpGetArgument("full", RestApiCallDocumentation::Type_String, |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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4836
diff
changeset
|
2153 "If present, retrieve the attachments list and their numerical ids", false) |
| 4409 | 2154 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") |
| 2155 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
| 2156 return; | |
| 2157 } | |
| 2158 | |
| 2159 const std::string resourceType = call.GetFullUri() [0]; | |
| 2160 const std::string publicId = call.GetUriComponent("id", ""); | |
|
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
2161 std::set<FileContentType> attachments; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2162 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2163 |
|
4853
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2164 Json::Value result; |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2165 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2166 if (call.HasArgument("full")) |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2167 { |
|
4853
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2168 result = Json::objectValue; |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2169 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2170 for (std::set<FileContentType>::const_iterator |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2171 it = attachments.begin(); it != attachments.end(); ++it) |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2172 { |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2173 std::string key = EnumerationToString(*it); |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2174 result[key] = static_cast<uint16_t>(*it); |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2175 } |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2176 } |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2177 else |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2178 { |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2179 result = Json::arrayValue; |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2180 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2181 for (std::set<FileContentType>::const_iterator |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2182 it = attachments.begin(); it != attachments.end(); ++it) |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2183 { |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2184 result.append(EnumerationToString(*it)); |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2185 } |
|
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5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2186 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2187 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2188 call.GetOutput().AnswerJson(result); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2189 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2190 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2191 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2192 static void AddAttachmentDocumentation(RestApiGetCall& call, |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2193 const std::string& resourceType) |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2194 { |
|
f7d5372b59b3
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|
2195 call.GetDocumentation() |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2196 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
|
f7d5372b59b3
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4623
diff
changeset
|
2197 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
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diff
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|
2198 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
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4623
diff
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|
2199 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2200 } |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2201 |
|
f7d5372b59b3
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4623
diff
changeset
|
2202 |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2203 static bool GetAttachmentInfo(FileInfo& info, |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2204 RestApiGetCall& call) |
|
751
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changeset
|
2205 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2206 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2207 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2208 const std::string publicId = call.GetUriComponent("id", ""); |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2209 const std::string name = call.GetUriComponent("name", ""); |
|
751
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2210 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2211 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2212 int64_t revision; |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2213 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2214 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2215 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2216 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2217 int64_t userRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2218 std::string userMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2219 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2220 revision == userRevision && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2221 info.GetUncompressedMD5() == userMD5) |
|
4627
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diff
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|
2222 { |
|
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parents:
4623
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changeset
|
2223 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2224 return false; |
|
f7d5372b59b3
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|
2225 } |
|
f7d5372b59b3
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|
2226 else |
|
f7d5372b59b3
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4623
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|
2227 { |
|
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4623
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changeset
|
2228 return true; |
|
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4623
diff
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|
2229 } |
|
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|
2230 } |
|
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|
2231 else |
|
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changeset
|
2232 { |
|
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changeset
|
2233 throw OrthancException(ErrorCode_UnknownResource); |
|
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|
2234 } |
|
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|
2235 } |
|
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|
2236 |
|
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|
2237 |
| 974 | 2238 static void GetAttachmentOperations(RestApiGetCall& call) |
|
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|
2239 { |
| 4409 | 2240 if (call.IsDocumentation()) |
| 2241 { | |
| 2242 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2243 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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|
2244 AddAttachmentDocumentation(call, r); |
| 4409 | 2245 call.GetDocumentation() |
| 2246 .SetTag("Other") | |
| 4414 | 2247 .SetSummary("List operations on attachments") |
| 2248 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
| 4409 | 2249 .AddAnswerType(MimeType_Json, "List of the available operations") |
| 2250 .SetHttpGetSample("https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2/attachments/dicom", true); | |
| 2251 return; | |
| 2252 } | |
| 2253 | |
|
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|
2254 FileInfo info; |
|
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|
2255 if (GetAttachmentInfo(info, call)) |
|
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|
2256 { |
|
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|
2257 Json::Value operations = Json::arrayValue; |
|
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|
2258 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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1556
diff
changeset
|
2259 operations.append("compress"); |
|
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|
2260 operations.append("compressed-data"); |
|
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changeset
|
2261 |
|
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|
2262 if (info.GetCompressedMD5() != "") |
|
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|
2263 { |
|
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diff
changeset
|
2264 operations.append("compressed-md5"); |
|
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diff
changeset
|
2265 } |
|
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diff
changeset
|
2266 |
|
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|
2267 operations.append("compressed-size"); |
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2268 operations.append("data"); |
|
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Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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parents:
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|
2269 operations.append("info"); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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2270 operations.append("is-compressed"); |
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2271 |
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2272 if (info.GetUncompressedMD5() != "") |
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2273 { |
|
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2274 operations.append("md5"); |
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2275 } |
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2276 |
|
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2277 operations.append("size"); |
|
1700
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|
2278 operations.append("uncompress"); |
|
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2279 |
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2280 if (info.GetCompressedMD5() != "" && |
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2281 info.GetUncompressedMD5() != "") |
|
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|
2282 { |
|
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|
2283 operations.append("verify-md5"); |
|
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|
2284 } |
|
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|
2285 |
|
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|
2286 call.GetOutput().AnswerJson(operations); |
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2287 } |
|
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|
2288 } |
|
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|
2289 |
|
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|
2290 |
|
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|
2291 template <int uncompress> |
| 974 | 2292 static void GetAttachmentData(RestApiGetCall& call) |
|
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|
2293 { |
| 4409 | 2294 if (call.IsDocumentation()) |
| 2295 { | |
| 2296 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2297 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2298 call.GetDocumentation() | |
| 2299 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2300 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
| 2301 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
| 4418 | 2302 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
| 4409 | 2303 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 2304 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
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|
2305 .AddAnswerType(MimeType_Binary, "The attachment") |
|
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2306 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
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2307 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4409 | 2308 return; |
| 2309 } | |
| 2310 | |
|
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2311 ServerContext& context = OrthancRestApi::GetContext(call); |
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2312 |
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2313 CheckValidResourceType(call); |
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2314 |
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2315 std::string publicId = call.GetUriComponent("id", ""); |
|
1146
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diff
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2316 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
|
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2317 |
|
4640
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2318 FileInfo info; |
|
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diff
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|
2319 if (GetAttachmentInfo(info, call)) |
|
1146
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2320 { |
|
4640
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2321 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
|
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2322 |
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|
2323 if (uncompress) |
|
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2324 { |
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2325 context.AnswerAttachment(call.GetOutput(), publicId, type); |
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2326 } |
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2327 else |
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2328 { |
|
4640
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2329 // Return the raw data (possibly compressed), as stored on the filesystem |
|
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|
2330 std::string content; |
|
66109d24d26e
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diff
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|
2331 int64_t revision; |
|
5048
22966345eaba
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diff
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|
2332 context.ReadAttachment(content, revision, publicId, type, false, true /* skipCache when you absolutely need the compressed data */); |
|
4640
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2333 |
|
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|
2334 int64_t userRevision; |
|
66109d24d26e
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|
2335 std::string userMD5; |
|
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2336 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
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2337 revision == userRevision && |
|
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2338 info.GetUncompressedMD5() == userMD5) |
|
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2339 { |
|
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2340 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
66109d24d26e
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2341 } |
|
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2342 else |
|
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2343 { |
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|
2344 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
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2345 } |
|
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2346 } |
|
1146
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2347 } |
|
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2348 } |
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2349 |
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2350 |
| 974 | 2351 static void GetAttachmentSize(RestApiGetCall& call) |
|
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2352 { |
| 4409 | 2353 if (call.IsDocumentation()) |
| 2354 { | |
| 2355 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2356 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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|
2357 AddAttachmentDocumentation(call, r); |
| 4409 | 2358 call.GetDocumentation() |
| 2359 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2360 .SetSummary("Get size of attachment") | |
| 2361 .SetDescription("Get the size of one attachment associated with the given " + r) | |
| 2362 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
| 2363 return; | |
| 2364 } | |
| 2365 | |
|
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|
2366 FileInfo info; |
|
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|
2367 if (GetAttachmentInfo(info, call)) |
|
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|
2368 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
2369 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
|
751
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2370 } |
|
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2371 } |
|
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|
2372 |
|
4883
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parents:
4880
diff
changeset
|
2373 static void GetAttachmentInfo(RestApiGetCall& call) |
|
504624b0a062
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changeset
|
2374 { |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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changeset
|
2375 if (call.IsDocumentation()) |
|
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Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2376 { |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2377 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
504624b0a062
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|
2378 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2379 AddAttachmentDocumentation(call, r); |
|
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|
2380 call.GetDocumentation() |
|
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|
2381 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2382 .SetSummary("Get info about the attachment") |
|
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Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2383 .SetDescription("Get all the information about the attachment associated with the given " + r) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2384 .AddAnswerType(MimeType_Json, "JSON object containing the information about the attachment") |
| 5003 | 2385 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/attachments/dicom/info", true); |
|
4883
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Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2386 return; |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2387 } |
|
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|
2388 |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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4880
diff
changeset
|
2389 FileInfo info; |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2390 if (GetAttachmentInfo(info, call)) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2391 { |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2392 Json::Value result = Json::objectValue; |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2393 result["Uuid"] = info.GetUuid(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2394 result["ContentType"] = info.GetContentType(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2395 result["UncompressedSize"] = Json::Value::UInt64(info.GetUncompressedSize()); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2396 result["CompressedSize"] = Json::Value::UInt64(info.GetCompressedSize()); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2397 result["UncompressedMD5"] = info.GetUncompressedMD5(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2398 result["CompressedMD5"] = info.GetCompressedMD5(); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2399 |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2400 call.GetOutput().AnswerJson(result); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2401 } |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
2402 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2403 |
| 974 | 2404 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2405 { |
| 4409 | 2406 if (call.IsDocumentation()) |
| 2407 { | |
| 2408 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2409 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2410 AddAttachmentDocumentation(call, r); |
| 4409 | 2411 call.GetDocumentation() |
| 2412 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 4410 | 2413 .SetSummary("Get size of attachment on disk") |
| 4409 | 2414 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
| 4413 | 2415 "This is different from `.../size` iff `EnableStorage` is `true`.") |
| 4410 | 2416 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
| 4409 | 2417 return; |
| 2418 } | |
| 2419 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2420 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2421 if (GetAttachmentInfo(info, call)) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2422 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2423 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2424 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2425 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2426 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2427 |
| 974 | 2428 static void GetAttachmentMD5(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2429 { |
| 4410 | 2430 if (call.IsDocumentation()) |
| 2431 { | |
| 2432 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2433 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2434 AddAttachmentDocumentation(call, r); |
| 4410 | 2435 call.GetDocumentation() |
| 2436 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2437 .SetSummary("Get MD5 of attachment") | |
| 2438 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
| 2439 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
| 2440 return; | |
| 2441 } | |
| 2442 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2443 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2444 if (GetAttachmentInfo(info, call) && |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2445 info.GetUncompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2446 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2447 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2448 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2449 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2450 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2451 |
| 974 | 2452 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2453 { |
| 4410 | 2454 if (call.IsDocumentation()) |
| 2455 { | |
| 2456 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2457 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2458 AddAttachmentDocumentation(call, r); |
| 4410 | 2459 call.GetDocumentation() |
| 2460 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2461 .SetSummary("Get MD5 of attachment on disk") | |
| 2462 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
| 4413 | 2463 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
| 4410 | 2464 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
| 2465 return; | |
| 2466 } | |
| 2467 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2468 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2469 if (GetAttachmentInfo(info, call) && |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2470 info.GetCompressedMD5() != "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2471 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2472 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2473 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2474 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2475 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2476 |
| 974 | 2477 static void VerifyAttachment(RestApiPostCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2478 { |
| 4410 | 2479 if (call.IsDocumentation()) |
| 2480 { | |
| 2481 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2482 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2483 call.GetDocumentation() | |
| 2484 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2485 .SetSummary("Verify attachment") | |
| 2486 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
| 2487 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2488 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 2489 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
| 2490 return; | |
| 2491 } | |
| 2492 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2493 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2494 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2495 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2496 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2497 std::string name = call.GetUriComponent("name", ""); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2498 FileContentType contentType = StringToContentType(name); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2499 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2500 FileInfo info; |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2501 int64_t revision; // Ignored |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2502 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2503 info.GetCompressedMD5() == "" || |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2504 info.GetUncompressedMD5() == "") |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2505 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2506 // Inexistent resource, or no MD5 available |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2507 return; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2508 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2509 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2510 bool ok = false; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2511 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2512 // First check whether the compressed data is correctly stored in the disk |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2513 std::string data; |
|
5048
22966345eaba
skip StorageCache when verifying md5 or when re-compressing attachments
Alain Mazy <am@osimis.io>
parents:
5003
diff
changeset
|
2514 context.ReadAttachment(data, revision, publicId, StringToContentType(name), false, true /* skipCache when you absolutely need the compressed data */); |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2515 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2516 std::string actualMD5; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2517 Toolbox::ComputeMD5(actualMD5, data); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2518 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2519 if (actualMD5 == info.GetCompressedMD5()) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2520 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2521 // The compressed data is OK. If a compression algorithm was |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2522 // applied to it, now check the MD5 of the uncompressed data. |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2523 if (info.GetCompressionType() == CompressionType_None) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2524 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2525 ok = true; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2526 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2527 else |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2528 { |
|
5048
22966345eaba
skip StorageCache when verifying md5 or when re-compressing attachments
Alain Mazy <am@osimis.io>
parents:
5003
diff
changeset
|
2529 context.ReadAttachment(data, revision, publicId, StringToContentType(name), true, true /* skipCache when you absolutely need the compressed data */); |
|
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parents:
diff
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|
2530 Toolbox::ComputeMD5(actualMD5, data); |
|
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
2531 ok = (actualMD5 == info.GetUncompressedMD5()); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2532 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2533 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2534 |
|
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diff
changeset
|
2535 if (ok) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2536 { |
|
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2537 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2538 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2539 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2540 else |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2541 { |
|
4294
0923247e69f6
log categories: rest -> http + added lua & jobs
Alain Mazy <alain@mazy.be>
parents:
4272
diff
changeset
|
2542 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2543 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2544 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2545 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2546 |
| 974 | 2547 static void UploadAttachment(RestApiPutCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2548 { |
| 4414 | 2549 if (call.IsDocumentation()) |
| 2550 { | |
| 2551 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2552 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2553 call.GetDocumentation() | |
| 2554 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2555 .SetSummary("Set attachment") | |
| 2556 .SetDescription("Attach a file to the given DICOM " + r + | |
| 2557 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
| 2558 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 2559 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
| 2560 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2561 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2562 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
| 4414 | 2563 return; |
| 2564 } | |
| 2565 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2566 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2567 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2568 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2569 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2570 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2571 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2572 FileContentType contentType = StringToContentType(name); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2573 if (IsUserContentType(contentType)) // It is forbidden to modify internal attachments |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2574 { |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2575 int64_t oldRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2576 std::string oldMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2577 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2578 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2579 if (!hasOldRevision) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2580 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2581 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2582 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2583 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2584 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2585 // the actual value of "oldRevision" if the metadata is |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2586 // inexistent as expected |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2587 hasOldRevision = true; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2588 oldRevision = -1; // dummy value |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2589 oldMD5.clear(); // dummy value |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2590 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2591 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2592 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2593 int64_t newRevision; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2594 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2595 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2596 |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2597 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2598 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2599 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2600 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2601 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2602 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2603 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2604 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2605 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2606 |
| 974 | 2607 static void DeleteAttachment(RestApiDeleteCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2608 { |
| 4413 | 2609 if (call.IsDocumentation()) |
| 2610 { | |
| 2611 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2612 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2613 call.GetDocumentation() | |
| 2614 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2615 .SetSummary("Delete attachment") | |
| 4414 | 2616 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
| 2617 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
| 4413 | 2618 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2619 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2620 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2621 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4413 | 2622 return; |
| 2623 } | |
| 2624 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2625 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2626 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2627 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2628 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2629 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2630 |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2631 bool allowed; |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2632 if (IsUserContentType(contentType)) |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2633 { |
|
9329ba17a069
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2634 allowed = true; |
|
9329ba17a069
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2635 } |
|
9329ba17a069
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2636 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
changeset
|
2637 { |
|
2940
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
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2935
diff
changeset
|
2638 OrthancConfiguration::ReaderLock lock; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
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2935
diff
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|
2639 |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2640 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2641 contentType == FileContentType_DicomAsJson) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2642 { |
|
4767d36679ed
refactoring access to Orthanc configuration
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2935
diff
changeset
|
2643 allowed = true; |
|
4767d36679ed
refactoring access to Orthanc configuration
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2935
diff
changeset
|
2644 } |
|
4767d36679ed
refactoring access to Orthanc configuration
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parents:
2935
diff
changeset
|
2645 else |
|
4767d36679ed
refactoring access to Orthanc configuration
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parents:
2935
diff
changeset
|
2646 { |
|
4767d36679ed
refactoring access to Orthanc configuration
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2935
diff
changeset
|
2647 // It is forbidden to delete internal attachments, except for |
|
4767d36679ed
refactoring access to Orthanc configuration
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parents:
2935
diff
changeset
|
2648 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
|
4767d36679ed
refactoring access to Orthanc configuration
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diff
changeset
|
2649 // would be automatically reconstructed on the next GET call) |
|
4767d36679ed
refactoring access to Orthanc configuration
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changeset
|
2650 allowed = false; |
|
4767d36679ed
refactoring access to Orthanc configuration
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2935
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|
2651 } |
|
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|
2652 } |
|
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|
2653 |
|
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|
2654 if (allowed) |
|
751
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refactoring of OrthancRestApi
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diff
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|
2655 { |
|
4627
f7d5372b59b3
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4623
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changeset
|
2656 bool found; |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2657 int64_t revision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2658 std::string md5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2659 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
4627
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2660 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2661 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
|
4627
f7d5372b59b3
handling revisions of attachments
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4623
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changeset
|
2662 } |
|
f7d5372b59b3
handling revisions of attachments
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diff
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|
2663 else |
|
f7d5372b59b3
handling revisions of attachments
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changeset
|
2664 { |
|
f7d5372b59b3
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4623
diff
changeset
|
2665 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2666 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2667 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2668 throw OrthancException(ErrorCode_Revision, |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2669 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2670 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2671 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2672 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2673 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2674 false, -1 /* dummy value */, "" /* dummy value */); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2675 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2676 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2677 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2678 if (found) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2679 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2680 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2681 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2682 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2683 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2684 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2685 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2686 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2687 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2688 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2689 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2690 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2691 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2692 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2693 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2694 template <enum CompressionType compression> |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2695 static void ChangeAttachmentCompression(RestApiPostCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2696 { |
| 4413 | 2697 if (call.IsDocumentation()) |
| 2698 { | |
| 2699 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2700 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2701 call.GetDocumentation() | |
| 2702 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2703 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
| 2704 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
| 2705 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2706 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
| 4413 | 2707 return; |
| 2708 } | |
| 2709 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2710 CheckValidResourceType(call); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2711 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2712 std::string publicId = call.GetUriComponent("id", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2713 std::string name = call.GetUriComponent("name", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2714 FileContentType contentType = StringToContentType(name); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2715 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2716 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2717 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2718 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2719 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2720 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2721 static void IsAttachmentCompressed(RestApiGetCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2722 { |
| 4413 | 2723 if (call.IsDocumentation()) |
| 2724 { | |
| 2725 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2726 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2727 AddAttachmentDocumentation(call, r); |
| 4413 | 2728 call.GetDocumentation() |
| 2729 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2730 .SetSummary("Is attachment compressed?") | |
| 2731 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
| 2732 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
| 2733 return; | |
| 2734 } | |
| 2735 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2736 FileInfo info; |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2737 if (GetAttachmentInfo(info, call)) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2738 { |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2739 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2740 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2741 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2742 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2743 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2744 |
| 782 | 2745 // Raw access to the DICOM tags of an instance ------------------------------ |
| 2746 | |
| 974 | 2747 static void GetRawContent(RestApiGetCall& call) |
| 782 | 2748 { |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2749 if (call.IsDocumentation()) |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2750 { |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2751 call.GetDocumentation() |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2752 .SetTag("Instances") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2753 .SetSummary("Get raw tag") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2754 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2755 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
5393
c5c00bee291a
in openapi generator: renamed '...' into 'path' since '...' is an invalid name
Alain Mazy <am@osimis.io>
parents:
5392
diff
changeset
|
2756 .SetUriArgument("path", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2757 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2758 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2759 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2760 "or JSON array containing the list of available tags if accessing a dataset"); |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2761 return; |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2762 } |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2763 |
| 782 | 2764 std::string id = call.GetUriComponent("id", ""); |
| 2765 | |
| 2766 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
| 2767 | |
| 2768 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
| 2769 } | |
| 2770 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2771 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2772 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2773 static bool ExtractSharedTags(Json::Value& shared, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2774 ServerContext& context, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2775 const std::string& publicId) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2776 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2777 // Retrieve all the instances of this patient/study/series |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2778 typedef std::list<std::string> Instances; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2779 Instances instances; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2780 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2781 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2782 // Loop over the instances |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2783 bool isFirst = true; |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2784 shared = Json::objectValue; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2785 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2786 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2787 it != instances.end(); ++it) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2788 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2789 // Get the tags of the current instance, in the simplified format |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2790 Json::Value tags; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2791 |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2792 try |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2793 { |
| 2124 | 2794 context.ReadDicomAsJson(tags, *it); |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2795 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2796 catch (OrthancException&) |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2797 { |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2798 // Race condition: This instance has been removed since |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2799 // (*). Ignore this instance. |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2800 continue; |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2801 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2802 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2803 if (tags.type() != Json::objectValue) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2804 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2805 return false; // Error |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2806 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2807 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2808 // Only keep the tags that are mapped to a string |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2809 Json::Value::Members members = tags.getMemberNames(); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2810 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2811 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2812 const Json::Value& tag = tags[members[i]]; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2813 if (tag.type() != Json::objectValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2814 tag["Type"].type() != Json::stringValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2815 tag["Type"].asString() != "String") |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2816 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2817 tags.removeMember(members[i]); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2818 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2819 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2820 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2821 if (isFirst) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2822 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2823 // This is the first instance, keep its tags as such |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2824 shared = tags; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2825 isFirst = false; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2826 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2827 else |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2828 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2829 // Loop over all the members of the shared tags extracted so |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2830 // far. If the value of one of these tags does not match its |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2831 // value in the current instance, remove it. |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2832 members = shared.getMemberNames(); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2833 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2834 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2835 if (!tags.isMember(members[i]) || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2836 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2837 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2838 shared.removeMember(members[i]); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2839 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2840 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2841 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2842 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2843 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2844 return true; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2845 } |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2846 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2847 |
| 974 | 2848 static void GetSharedTags(RestApiGetCall& call) |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2849 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2850 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2851 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2852 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2853 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2854 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2855 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2856 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2857 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2858 .SetSummary("Get shared tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2859 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2860 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2861 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2862 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2863 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2864 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2865 } |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2866 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2867 ServerContext& context = OrthancRestApi::GetContext(call); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2868 std::string publicId = call.GetUriComponent("id", ""); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2869 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2870 Json::Value sharedTags; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2871 if (ExtractSharedTags(sharedTags, context, publicId)) |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2872 { |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2873 // Success: Send the value of the shared tags |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2874 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2875 } |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2876 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2877 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2878 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2879 template <enum ResourceType resourceType, |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2880 enum DicomModule module> |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2881 static void GetModule(RestApiGetCall& call) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2882 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2883 if (call.IsDocumentation()) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2884 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2885 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2886 std::string m; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2887 switch (module) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2888 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2889 case DicomModule_Patient: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2890 m = "patient"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2891 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2892 case DicomModule_Study: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2893 m = "study"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2894 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2895 case DicomModule_Series: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2896 m = "series"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2897 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2898 case DicomModule_Instance: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2899 m = "instance"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2900 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2901 default: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2902 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2903 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2904 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2905 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2906 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2907 call.GetDocumentation() |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2908 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2909 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2910 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2911 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2912 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2913 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2914 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2915 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2916 return; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2917 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2918 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2919 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2920 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2921 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2922 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2923 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2924 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
|
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2925 { |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2926 throw OrthancException(ErrorCode_NotImplemented); |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2927 } |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2928 |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2929 ServerContext& context = OrthancRestApi::GetContext(call); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2930 std::string publicId = call.GetUriComponent("id", ""); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2931 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2932 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2933 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2934 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2935 typedef std::set<DicomTag> ModuleTags; |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2936 ModuleTags moduleTags; |
| 1368 | 2937 DicomTag::AddTagsForModule(moduleTags, module); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2938 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2939 Json::Value tags; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2940 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2941 if (resourceType != ResourceType_Instance) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2942 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2943 // Retrieve all the instances of this patient/study/series |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2944 typedef std::list<std::string> Instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2945 Instances instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2946 context.GetIndex().GetChildInstances(instances, publicId); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2947 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2948 if (instances.empty()) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2949 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2950 return; // Error: No instance (should never happen) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2951 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2952 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2953 // Select one child instance |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2954 publicId = instances.front(); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2955 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2956 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2957 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2958 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2959 // Filter the tags of the instance according to the module |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2960 Json::Value result = Json::objectValue; |
| 1303 | 2961 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2962 { |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2963 std::string s = tag->Format(); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2964 if (tags.isMember(s)) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2965 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2966 result[s] = tags[s]; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2967 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2968 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2969 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2970 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2971 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2972 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2973 |
| 1722 | 2974 namespace |
| 2975 { | |
| 2976 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
| 2977 } | |
| 2978 | |
| 2979 | |
| 2980 static void AccumulateLookupResults(LookupResults& result, | |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2981 ServerIndex& index, |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2982 const DicomTag& tag, |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2983 const std::string& value, |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2984 ResourceType level) |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2985 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2986 std::vector<std::string> tmp; |
|
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
2987 index.LookupIdentifierExact(tmp, level, tag, value); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2988 |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2989 for (size_t i = 0; i < tmp.size(); i++) |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2990 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2991 result.push_back(std::make_pair(level, tmp[i])); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2992 } |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2993 } |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2994 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2995 |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2996 static void Lookup(RestApiPostCall& call) |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2997 { |
| 4422 | 2998 if (call.IsDocumentation()) |
| 2999 { | |
| 3000 call.GetDocumentation() | |
| 3001 .SetTag("System") | |
| 3002 .SetSummary("Look for DICOM identifiers") | |
| 3003 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
| 3004 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
| 3005 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
| 3006 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
| 3007 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
| 3008 "DICOM resource that is stored by Orthanc"); | |
| 3009 return; | |
| 3010 } | |
| 3011 | |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
3012 std::string tag; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
3013 call.BodyToString(tag); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3014 |
| 1722 | 3015 LookupResults resources; |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3016 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3017 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3018 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3019 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3020 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3021 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3022 Json::Value result = Json::arrayValue; |
| 1722 | 3023 for (LookupResults::const_iterator |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3024 it = resources.begin(); it != resources.end(); ++it) |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3025 { |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
changeset
|
3026 ResourceType type = it->first; |
|
f167b672db94
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changeset
|
3027 const std::string& id = it->second; |
|
f167b672db94
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parents:
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changeset
|
3028 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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changeset
|
3029 Json::Value item = Json::objectValue; |
|
f167b672db94
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parents:
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diff
changeset
|
3030 item["Type"] = EnumerationToString(type); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
changeset
|
3031 item["ID"] = id; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
changeset
|
3032 item["Path"] = GetBasePath(type, id); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3033 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
changeset
|
3034 result.append(item); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3035 } |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3036 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
changeset
|
3037 call.GetOutput().AnswerJson(result); |
|
f167b672db94
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3038 } |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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parents:
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diff
changeset
|
3039 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
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1054
diff
changeset
|
3040 |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
changeset
|
3041 namespace |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3042 { |
|
3021
2cbafb5d5a62
renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
3043 class FindVisitor : public ServerContext::ILookupVisitor |
|
3001
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refactoring /tools/find using LookupResource::IVisitor
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parents:
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changeset
|
3044 { |
|
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refactoring /tools/find using LookupResource::IVisitor
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parents:
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|
3045 private: |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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changeset
|
3046 bool isComplete_; |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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diff
changeset
|
3047 std::list<std::string> resources_; |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3048 FindStorageAccessMode findStorageAccessMode_; |
|
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3049 |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3050 // cache the data we used during lookup and that we could reuse when building the answers |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3051 std::map<std::string, std::string> instancesIds_; // the id of an instance for each found resource. |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3052 std::map<std::string, boost::shared_ptr<DicomMap> > resourcesMainDicomTags_; // all tags read from DB for a resource (current level and upper levels) |
|
5060
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3053 std::map<std::string, boost::shared_ptr<Json::Value> > resourcesDicomAsJson_; // the dicom-as-json for a resource |
|
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3054 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3055 DicomToJsonFormat format_; |
|
3001
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changeset
|
3056 |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
changeset
|
3057 public: |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3058 explicit FindVisitor(DicomToJsonFormat format, FindStorageAccessMode findStorageAccessMode) : |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3059 isComplete_(false), |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3060 findStorageAccessMode_(findStorageAccessMode), |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
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|
3061 format_(format) |
|
3001
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parents:
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|
3062 { |
|
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refactoring /tools/find using LookupResource::IVisitor
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parents:
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|
3063 } |
| 4205 | 3064 |
| 3065 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
|
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3066 { |
|
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3067 return false; // (*) |
|
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3068 } |
|
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3069 |
| 4205 | 3070 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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|
3071 { |
|
7695a9c81099
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parents:
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|
3072 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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|
3073 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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changeset
|
3074 |
|
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refactoring /tools/find using LookupResource::IVisitor
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parents:
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|
3075 virtual void Visit(const std::string& publicId, |
|
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
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diff
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|
3076 const std::string& instanceId, |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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diff
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|
3077 const DicomMap& mainDicomTags, |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3078 const Json::Value* dicomAsJson) ORTHANC_OVERRIDE |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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parents:
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diff
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|
3079 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
3080 resources_.push_back(publicId); |
|
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3081 instancesIds_[publicId] = instanceId; |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
3082 resourcesMainDicomTags_[publicId].reset(mainDicomTags.Clone()); |
|
5060
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3083 if (dicomAsJson != NULL) |
|
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
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|
3084 { |
|
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3085 resourcesDicomAsJson_[publicId].reset(new Json::Value(*dicomAsJson)); // keep our own copy because we might reuse it between lookup and answers |
|
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3086 } |
|
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3087 else |
|
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3088 { |
|
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3089 resourcesDicomAsJson_[publicId] = boost::shared_ptr<Json::Value>(); |
|
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
changeset
|
3090 } |
|
3001
7695a9c81099
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3091 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3092 |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3093 void Answer(RestApiOutput& output, |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3094 ServerContext& context, |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3095 ResourceType level, |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3096 bool expand, |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3097 const std::set<DicomTag>& requestedTags) const |
|
3001
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refactoring /tools/find using LookupResource::IVisitor
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changeset
|
3098 { |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3099 AnswerListOfResources(output, context, resources_, instancesIds_, resourcesMainDicomTags_, resourcesDicomAsJson_, level, expand, format_, requestedTags, IsStorageAccessAllowedForAnswers(findStorageAccessMode_)); |
|
3001
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|
3100 } |
|
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|
3101 }; |
|
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|
3102 } |
|
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|
3103 |
|
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|
3104 |
| 1354 | 3105 static void Find(RestApiPostCall& call) |
| 3106 { | |
| 2998 | 3107 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
| 3108 static const char* const KEY_EXPAND = "Expand"; | |
| 3109 static const char* const KEY_LEVEL = "Level"; | |
| 3110 static const char* const KEY_LIMIT = "Limit"; | |
| 3111 static const char* const KEY_QUERY = "Query"; | |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3112 static const char* const KEY_REQUESTED_TAGS = "RequestedTags"; |
| 2998 | 3113 static const char* const KEY_SINCE = "Since"; |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
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5227
diff
changeset
|
3114 static const char* const KEY_LABELS = "Labels"; // New in Orthanc 1.12.0 |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
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5227
diff
changeset
|
3115 static const char* const KEY_LABELS_CONSTRAINT = "LabelsConstraint"; // New in Orthanc 1.12.0 |
| 2998 | 3116 |
| 4421 | 3117 if (call.IsDocumentation()) |
| 3118 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
3119 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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4694
diff
changeset
|
3120 |
| 4421 | 3121 call.GetDocumentation() |
| 3122 .SetTag("System") | |
| 3123 .SetSummary("Look for local resources") | |
| 3124 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
| 3125 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
| 3126 "https://book.orthanc-server.com/users/rest.html#performing-finds-within-orthanc") | |
| 3127 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, | |
| 3128 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
| 3129 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
| 3130 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
| 3131 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
| 3132 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
| 3133 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
| 3134 "Limit the number of reported resources", false) | |
| 3135 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
| 3136 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
|
4935
acd3f72e2a21
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4902
diff
changeset
|
3137 .SetRequestField(KEY_REQUESTED_TAGS, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
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diff
changeset
|
3138 "A list of DICOM tags to include in the response (applicable only if \"Expand\" is set to true). " |
|
acd3f72e2a21
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4902
diff
changeset
|
3139 "The tags requested tags are returned in the 'RequestedTags' field in the response. " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
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4902
diff
changeset
|
3140 "Note that, if you are requesting tags that are not listed in the Main Dicom Tags stored in DB, building the response " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
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4902
diff
changeset
|
3141 "might be slow since Orthanc will need to access the DICOM files. If not specified, Orthanc will return " |
|
acd3f72e2a21
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parents:
4902
diff
changeset
|
3142 "all Main Dicom Tags to keep backward compatibility with Orthanc prior to 1.11.0.", false) |
| 4421 | 3143 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, |
| 3144 "Associative array containing the filter on the values of the DICOM tags", true) | |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3145 .SetRequestField(KEY_LABELS, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3146 "List of strings specifying which labels to look for in the resources (new in Orthanc 1.12.0)", true) |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3147 .SetRequestField(KEY_LABELS_CONSTRAINT, RestApiCallDocumentation::Type_String, |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3148 "Constraint on the labels, can be `All`, `Any`, or `None` (defaults to `All`, new in Orthanc 1.12.0)", true) |
| 4421 | 3149 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 3150 "about the reported resources (if `Expand` argument is `true`)"); | |
| 3151 return; | |
| 3152 } | |
| 3153 | |
| 1358 | 3154 ServerContext& context = OrthancRestApi::GetContext(call); |
| 1354 | 3155 |
| 3156 Json::Value request; | |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3157 if (!call.ParseJsonRequest(request) || |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3158 request.type() != Json::objectValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3159 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3160 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3161 "The body must contain a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3162 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3163 else if (!request.isMember(KEY_LEVEL) || |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3164 request[KEY_LEVEL].type() != Json::stringValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3165 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3166 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3167 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3168 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3169 else if (!request.isMember(KEY_QUERY) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3170 request[KEY_QUERY].type() != Json::objectValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3171 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3172 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3173 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3174 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3175 else if (request.isMember(KEY_CASE_SENSITIVE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3176 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3177 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3178 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3179 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" must be a Boolean"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3180 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3181 else if (request.isMember(KEY_LIMIT) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3182 request[KEY_LIMIT].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3183 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3184 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3185 "Field \"" + std::string(KEY_LIMIT) + "\" must be an integer"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3186 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3187 else if (request.isMember(KEY_SINCE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3188 request[KEY_SINCE].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3189 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3190 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3191 "Field \"" + std::string(KEY_SINCE) + "\" must be an integer"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3192 } |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3193 else if (request.isMember(KEY_REQUESTED_TAGS) && |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3194 request[KEY_REQUESTED_TAGS].type() != Json::arrayValue) |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3195 { |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3196 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3197 "Field \"" + std::string(KEY_REQUESTED_TAGS) + "\" must be an array"); |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3198 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3199 else if (request.isMember(KEY_LABELS) && |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3200 request[KEY_LABELS].type() != Json::arrayValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3201 { |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3202 throw OrthancException(ErrorCode_BadRequest, |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3203 "Field \"" + std::string(KEY_LABELS) + "\" must be an array of strings"); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3204 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3205 else if (request.isMember(KEY_LABELS_CONSTRAINT) && |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3206 request[KEY_LABELS_CONSTRAINT].type() != Json::stringValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3207 { |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3208 throw OrthancException(ErrorCode_BadRequest, |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3209 "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be an array of strings"); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3210 } |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3211 else |
| 1354 | 3212 { |
| 3213 bool expand = false; | |
| 2998 | 3214 if (request.isMember(KEY_EXPAND)) |
| 1354 | 3215 { |
| 2998 | 3216 expand = request[KEY_EXPAND].asBool(); |
| 1354 | 3217 } |
| 3218 | |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3219 bool caseSensitive = false; |
| 2998 | 3220 if (request.isMember(KEY_CASE_SENSITIVE)) |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3221 { |
| 2998 | 3222 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3223 } |
|
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3224 |
| 1758 | 3225 size_t limit = 0; |
| 2998 | 3226 if (request.isMember(KEY_LIMIT)) |
| 1758 | 3227 { |
| 2998 | 3228 int tmp = request[KEY_LIMIT].asInt(); |
| 1847 | 3229 if (tmp < 0) |
| 1758 | 3230 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3231 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3232 "Field \"" + std::string(KEY_LIMIT) + "\" must be a positive integer"); |
| 1758 | 3233 } |
| 1847 | 3234 |
| 3235 limit = static_cast<size_t>(tmp); | |
| 1758 | 3236 } |
| 3237 | |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3238 size_t since = 0; |
| 2998 | 3239 if (request.isMember(KEY_SINCE)) |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3240 { |
| 2998 | 3241 int tmp = request[KEY_SINCE].asInt(); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3242 if (tmp < 0) |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3243 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3244 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3245 "Field \"" + std::string(KEY_SINCE) + "\" must be a positive integer"); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3246 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3247 |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3248 since = static_cast<size_t>(tmp); |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3249 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3250 |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3251 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3252 |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3253 if (request.isMember(KEY_REQUESTED_TAGS)) |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3254 { |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3255 FromDcmtkBridge::ParseListOfTags(requestedTags, request[KEY_REQUESTED_TAGS]); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3256 } |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3257 |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3258 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
| 1360 | 3259 |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3260 DatabaseLookup query; |
| 1358 | 3261 |
| 2998 | 3262 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
| 1354 | 3263 for (size_t i = 0; i < members.size(); i++) |
| 3264 { | |
| 2998 | 3265 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
| 1354 | 3266 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3267 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3268 "Tag \"" + members[i] + "\" must be associated with a string"); |
| 1354 | 3269 } |
| 3270 | |
|
3163
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3271 const std::string value = request[KEY_QUERY][members[i]].asString(); |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3272 |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3273 if (!value.empty()) |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3274 { |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3275 // An empty string corresponds to an universal constraint, |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3276 // so we ignore it. This mimics the behavior of class |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3277 // "OrthancFindRequestHandler" |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3278 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3279 value, caseSensitive, true); |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3280 } |
|
1361
94ffb597d297
refactoring of C-Find SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1360
diff
changeset
|
3281 } |
| 2876 | 3282 |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3283 if (request.isMember(KEY_LABELS)) // New in Orthanc 1.12.0 |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3284 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3285 for (Json::Value::ArrayIndex i = 0; i < request[KEY_LABELS].size(); i++) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3286 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3287 if (request[KEY_LABELS][i].type() != Json::stringValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3288 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3289 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS) + "\" must contain strings"); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3290 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3291 else |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3292 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3293 query.AddLabel(request[KEY_LABELS][i].asString()); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3294 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3295 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3296 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3297 |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3298 query.SetLabelsConstraint(LabelsConstraint_All); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3299 |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3300 if (request.isMember(KEY_LABELS_CONSTRAINT)) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3301 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3302 const std::string& s = request[KEY_LABELS_CONSTRAINT].asString(); |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3303 if (s == "All") |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3304 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3305 query.SetLabelsConstraint(LabelsConstraint_All); |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3306 } |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3307 else if (s == "Any") |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3308 { |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3309 query.SetLabelsConstraint(LabelsConstraint_Any); |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3310 } |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3311 else if (s == "None") |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3312 { |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3313 query.SetLabelsConstraint(LabelsConstraint_None); |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3314 } |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3315 else |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3316 { |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3317 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be \"All\", \"Any\", or \"None\""); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3318 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3319 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3320 |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3321 FindVisitor visitor(OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human), context.GetFindStorageAccessMode()); |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3322 context.Apply(visitor, query, level, since, limit); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3323 visitor.Answer(call.GetOutput(), context, level, expand, requestedTags); |
| 1354 | 3324 } |
| 3325 } | |
| 3326 | |
| 3327 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3328 template <enum ResourceType start, |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3329 enum ResourceType end> |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3330 static void GetChildResources(RestApiGetCall& call) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3331 { |
| 4415 | 3332 if (call.IsDocumentation()) |
| 3333 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3334 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3335 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3336 |
| 4415 | 3337 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
| 3338 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3339 call.GetDocumentation() | |
| 3340 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3341 .SetSummary("Get child " + children) | |
| 3342 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3343 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3344 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3345 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
|
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3346 "If false or missing, only retrieve the list of child " + children, false) |
| 4415 | 3347 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) |
| 3348 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
| 3349 return; | |
| 3350 } | |
| 3351 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3352 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3353 ServerContext& context = OrthancRestApi::GetContext(call); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3354 |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3355 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3356 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3357 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3358 std::list<std::string> a, b, c; |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3359 a.push_back(call.GetUriComponent("id", "")); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3360 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3361 ResourceType type = start; |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3362 while (type != end) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3363 { |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3364 b.clear(); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3365 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3366 for (std::list<std::string>::const_iterator |
| 1303 | 3367 it = a.begin(); it != a.end(); ++it) |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3368 { |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3369 index.GetChildren(c, *it); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3370 b.splice(b.begin(), c); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3371 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3372 |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3373 type = GetChildResourceType(type); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3374 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3375 a.clear(); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3376 a.splice(a.begin(), b); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3377 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3378 |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3379 AnswerListOfResources(call.GetOutput(), context, a, type, !call.HasArgument("expand") || call.GetBooleanArgument("expand", false), // this "expand" is the only one to have a false default value to keep backward compatibility |
|
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3380 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), |
|
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3381 requestedTags, |
|
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3382 true /* allowStorageAccess */); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3383 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3384 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3385 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3386 static void GetChildInstancesTags(RestApiGetCall& call) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3387 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3388 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3389 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3390 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3391 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3392 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3393 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3394 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3395 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3396 .SetSummary("Get tags of instances") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3397 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3398 " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3399 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3400 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3401 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3402 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3403 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3404 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3405 } |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3406 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3407 ServerContext& context = OrthancRestApi::GetContext(call); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3408 std::string publicId = call.GetUriComponent("id", ""); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3409 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3410 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3411 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3412 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3413 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3414 // Retrieve all the instances of this patient/study/series |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3415 typedef std::list<std::string> Instances; |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3416 Instances instances; |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3417 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3418 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3419 |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3420 Json::Value result = Json::objectValue; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3421 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3422 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 3423 it != instances.end(); ++it) |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3424 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3425 Json::Value full; |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3426 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3427 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3428 if (format != DicomToJsonFormat_Full) |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3429 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3430 Json::Value simplified; |
|
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
3431 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3432 result[*it] = simplified; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3433 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3434 else |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3435 { |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3436 result[*it] = full; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3437 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3438 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3439 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3440 call.GetOutput().AnswerJson(result); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3441 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3442 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3443 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3444 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3445 template <enum ResourceType start, |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3446 enum ResourceType end> |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3447 static void GetParentResource(RestApiGetCall& call) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3448 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3449 assert(start > end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3450 |
| 4415 | 3451 if (call.IsDocumentation()) |
| 3452 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3453 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3454 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3455 |
| 4415 | 3456 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
| 3457 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3458 call.GetDocumentation() | |
| 3459 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3460 .SetSummary("Get parent " + parent) | |
| 3461 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3462 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3463 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 3464 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
| 3465 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
| 3466 return; | |
| 3467 } | |
| 3468 | |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3469 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3470 |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3471 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3472 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3473 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3474 std::string current = call.GetUriComponent("id", ""); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3475 ResourceType currentType = start; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3476 while (currentType > end) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3477 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3478 std::string parent; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3479 if (!index.LookupParent(parent, current)) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3480 { |
|
8dac11c78d71
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3481 // Error that could happen if the resource gets deleted by |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3482 // another concurrent call |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3483 return; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3484 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3485 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3486 current = parent; |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3487 currentType = GetParentResourceType(currentType); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3488 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3489 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3490 assert(currentType == end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3491 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3492 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3493 |
| 4554 | 3494 Json::Value resource; |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3495 if (OrthancRestApi::GetContext(call).ExpandResource(resource, current, end, format, requestedTags, true /* allowStorageAccess */)) |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3496 { |
| 4554 | 3497 call.GetOutput().AnswerJson(resource); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3498 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3499 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3500 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3501 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3502 static void ExtractPdf(RestApiGetCall& call) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3503 { |
| 4407 | 3504 if (call.IsDocumentation()) |
| 3505 { | |
| 3506 call.GetDocumentation() | |
| 3507 .SetTag("Instances") | |
| 3508 .SetSummary("Get embedded PDF") | |
| 3509 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
| 3510 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
| 3511 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
| 3512 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
| 3513 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
| 3514 return; | |
| 3515 } | |
| 3516 | |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3517 const std::string id = call.GetUriComponent("id", ""); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3518 std::string pdf; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3519 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3520 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3521 if (locker.GetDicom().ExtractPdf(pdf)) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3522 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3523 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3524 return; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3525 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3526 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3527 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3528 |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3529 static void OrderSlices(RestApiGetCall& call) |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3530 { |
| 4421 | 3531 if (call.IsDocumentation()) |
| 3532 { | |
| 3533 call.GetDocumentation() | |
| 3534 .SetDeprecated() | |
| 3535 .SetTag("Series") | |
| 3536 .SetSummary("Order the slices") | |
| 3537 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
| 3538 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
| 3539 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
| 3540 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3541 "Ordered list of paths to DICOM instances") | |
| 3542 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3543 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
| 3544 "in the case of multiframe images.") | |
| 3545 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
| 3546 "Same information as the `Slices` field, but in a compact form") | |
| 3547 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
| 3548 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
| 3549 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); | |
| 3550 return; | |
| 3551 } | |
| 3552 | |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3553 const std::string id = call.GetUriComponent("id", ""); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3554 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3555 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3556 SliceOrdering ordering(index, id); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3557 |
|
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3558 Json::Value result; |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3559 ordering.Format(result); |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3560 call.GetOutput().AnswerJson(result); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3561 } |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3562 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3563 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3564 static void GetInstanceHeader(RestApiGetCall& call) |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3565 { |
| 4404 | 3566 if (call.IsDocumentation()) |
| 3567 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3568 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 3569 call.GetDocumentation() |
| 3570 .SetTag("Instances") | |
| 3571 .SetSummary("Get DICOM meta-header") | |
| 3572 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
| 3573 "combines hexadecimal tags with human-readable description.") | |
| 3574 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 3575 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
| 3576 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); | |
| 3577 return; | |
| 3578 } | |
| 3579 | |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3580 ServerContext& context = OrthancRestApi::GetContext(call); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3581 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3582 std::string publicId = call.GetUriComponent("id", ""); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3583 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3584 std::string dicomContent; |
|
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
3585 context.ReadDicomForHeader(dicomContent, publicId); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3586 |
|
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3587 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3588 // speed up things here |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3589 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3590 ParsedDicomFile dicom(dicomContent); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3591 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3592 Json::Value header; |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3593 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3594 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3595 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3596 } |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3597 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3598 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3599 static void InvalidateTags(RestApiPostCall& call) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3600 { |
| 4420 | 3601 if (call.IsDocumentation()) |
| 3602 { | |
| 3603 call.GetDocumentation() | |
| 3604 .SetTag("System") | |
| 3605 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
| 3606 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
| 3607 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
| 3608 "This is notably useful after changes to the `Dictionary` configuration option. " | |
| 3609 "https://book.orthanc-server.com/faq/orthanc-storage.html#storage-area"); | |
| 3610 return; | |
| 3611 } | |
| 3612 | |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3613 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3614 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3615 // Loop over the instances, grouping them by parent studies so as |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3616 // to avoid large memory consumption |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3617 std::list<std::string> studies; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3618 index.GetAllUuids(studies, ResourceType_Study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3619 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3620 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3621 study = studies.begin(); study != studies.end(); ++study) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3622 { |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3623 std::list<std::string> instances; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3624 index.GetChildInstances(instances, *study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3625 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3626 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3627 instance = instances.begin(); instance != instances.end(); ++instance) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3628 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3629 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3630 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3631 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3632 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3633 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3634 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3635 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3636 |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3637 void DocumentReconstructFilesField(RestApiPostCall& call) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3638 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3639 call.GetDocumentation() |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3640 .SetRequestField(RECONSTRUCT_FILES, RestApiCallDocumentation::Type_Boolean, |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3641 "Also reconstruct the files of the resources (e.g: apply IngestTranscoding, StorageCompression). " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3642 "'false' by default. (New in Orthanc 1.11.0)", false); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3643 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3644 |
| 4994 | 3645 bool GetReconstructFilesField(const RestApiPostCall& call) |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3646 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3647 bool reconstructFiles = false; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3648 Json::Value request; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3649 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3650 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(RECONSTRUCT_FILES)) // allow "" payload to keep backward compatibility |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3651 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3652 if (!request[RECONSTRUCT_FILES].isBool()) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3653 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3654 throw OrthancException(ErrorCode_BadFileFormat, |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3655 "The field " + std::string(RECONSTRUCT_FILES) + " must contain a Boolean"); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3656 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3657 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3658 reconstructFiles = request[RECONSTRUCT_FILES].asBool(); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3659 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3660 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3661 return reconstructFiles; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3662 } |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3663 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3664 template <enum ResourceType type> |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3665 static void ReconstructResource(RestApiPostCall& call) |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3666 { |
| 4420 | 3667 if (call.IsDocumentation()) |
| 3668 { | |
| 3669 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
| 3670 call.GetDocumentation() | |
| 3671 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3672 .SetSummary("Reconstruct tags & optionally files of " + resource) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3673 .SetDescription("Reconstruct the main DICOM tags in DB of the " + resource + " whose Orthanc identifier is provided " |
| 4420 | 3674 "in the URL. This is useful if child studies/series/instances have inconsistent values for " |
| 3675 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
| 3676 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
| 3677 "parsed again, and the Orthanc index will be updated accordingly.") | |
| 3678 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3679 DocumentReconstructFilesField(call); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3680 |
| 4420 | 3681 return; |
| 3682 } | |
| 3683 | |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3684 ServerContext& context = OrthancRestApi::GetContext(call); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3685 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", ""), GetReconstructFilesField(call)); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3686 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3687 } |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3688 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3689 |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3690 static void ReconstructAllResources(RestApiPostCall& call) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3691 { |
| 4420 | 3692 if (call.IsDocumentation()) |
| 3693 { | |
| 3694 call.GetDocumentation() | |
| 3695 .SetTag("System") | |
| 3696 .SetSummary("Reconstruct all the index") | |
| 3697 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
| 3698 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
| 3699 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3700 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated. " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3701 "If you have a large database to process, it is advised to use the Housekeeper plugin to perform " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3702 "this action resource by resource"); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3703 DocumentReconstructFilesField(call); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3704 |
| 4420 | 3705 return; |
| 3706 } | |
| 3707 | |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3708 ServerContext& context = OrthancRestApi::GetContext(call); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3709 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3710 std::list<std::string> studies; |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3711 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3712 bool reconstructFiles = GetReconstructFilesField(call); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3713 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3714 for (std::list<std::string>::const_iterator |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3715 study = studies.begin(); study != studies.end(); ++study) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3716 { |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3717 ServerToolbox::ReconstructResource(context, *study, reconstructFiles); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3718 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3719 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3720 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3721 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3722 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3723 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3724 static void GetBulkChildren(std::set<std::string>& target, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3725 ServerIndex& index, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3726 const std::set<std::string>& source) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3727 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3728 target.clear(); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3729 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3730 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3731 it = source.begin(); it != source.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3732 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3733 std::list<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3734 index.GetChildren(children, *it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3735 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3736 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3737 child = children.begin(); child != children.end(); ++child) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3738 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3739 target.insert(*child); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3740 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3741 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3742 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3743 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3744 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3745 static void AddMetadata(Json::Value& target, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3746 ServerIndex& index, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3747 const std::string& resource, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3748 ResourceType level) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3749 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3750 target = Json::objectValue; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3751 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3752 std::map<MetadataType, std::string> content; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3753 index.GetAllMetadata(content, resource, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3754 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3755 for (std::map<MetadataType, std::string>::const_iterator |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3756 it = content.begin(); it != content.end(); ++it) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3757 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3758 target[EnumerationToString(it->first)] = it->second; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3759 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3760 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3761 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3762 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3763 static void BulkContent(RestApiPostCall& call) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3764 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3765 static const char* const LEVEL = "Level"; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3766 static const char* const METADATA = "Metadata"; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3767 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3768 if (call.IsDocumentation()) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3769 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3770 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3771 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3772 call.GetDocumentation() |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3773 .SetTag("System") |
| 4879 | 3774 .SetSummary("Describe a set of resources") |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3775 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3776 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3777 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3778 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3779 "`Instance`). Orthanc will loop over the items inside `Resources`, and explore upward or " |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3780 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3781 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3782 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3783 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3784 "whose identifiers are provided in the `Resources` field, in one single call."); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3785 return; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3786 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3787 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3788 Json::Value request; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3789 if (!call.ParseJsonRequest(request) || |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3790 request.type() != Json::objectValue) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3791 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3792 throw OrthancException(ErrorCode_BadRequest, |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3793 "The body must contain a JSON object"); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3794 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3795 else |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3796 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3797 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3798 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3799 bool metadata = true; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3800 if (request.isMember(METADATA)) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3801 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3802 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3803 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3804 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3805 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3806 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3807 Json::Value answer = Json::arrayValue; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3808 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3809 if (request.isMember(LEVEL)) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3810 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3811 // Complex case: Need to explore the DICOM hierarchy |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3812 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3813 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3814 std::set<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3815 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3816 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3817 std::set<std::string> interest; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3818 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3819 assert(ResourceType_Patient < ResourceType_Study && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3820 ResourceType_Study < ResourceType_Series && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3821 ResourceType_Series < ResourceType_Instance); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3822 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3823 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3824 it = resources.begin(); it != resources.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3825 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3826 ResourceType type; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3827 if (index.LookupResourceType(type, *it)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3828 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3829 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3830 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3831 // This resource is already from the level of interest |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3832 interest.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3833 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3834 else if (type < level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3835 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3836 // Need to explore children |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3837 std::set<std::string> current; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3838 current.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3839 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3840 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3841 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3842 std::set<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3843 GetBulkChildren(children, index, current); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3844 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3845 type = GetChildResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3846 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3847 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3848 for (std::set<std::string>::const_iterator |
| 4716 | 3849 it2 = children.begin(); it2 != children.end(); ++it2) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3850 { |
| 4716 | 3851 interest.insert(*it2); |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3852 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3853 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3854 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3855 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3856 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3857 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3858 current.swap(children); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3859 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3860 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3861 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3862 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3863 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3864 // Need to explore parents |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3865 std::string current = *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3866 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3867 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3868 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3869 std::string parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3870 if (index.LookupParent(parent, current)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3871 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3872 type = GetParentResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3873 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3874 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3875 interest.insert(parent); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3876 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3877 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3878 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3879 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3880 current = parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3881 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3882 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3883 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3884 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3885 break; // The resource has been deleted during the exploration |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3886 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3887 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3888 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3889 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3890 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3891 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3892 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3893 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3894 } |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3895 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3896 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3897 it = interest.begin(); it != interest.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3898 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3899 Json::Value item; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3900 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3901 |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3902 if (OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3903 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3904 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3905 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3906 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3907 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3908 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3909 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3910 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3911 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3912 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3913 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3914 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3915 // Simple case: We return the queried resources as such |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3916 std::list<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3917 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3918 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3919 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3920 it = resources.begin(); it != resources.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3921 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3922 ResourceType level; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3923 Json::Value item; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3924 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3925 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3926 if (index.LookupResourceType(level, *it) && |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3927 OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3928 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3929 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3930 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3931 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3932 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3933 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3934 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3935 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3936 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3937 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3938 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3939 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3940 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3941 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3942 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3943 call.GetOutput().AnswerJson(answer); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3944 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3945 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3946 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3947 |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3948 static void BulkDelete(RestApiPostCall& call) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3949 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3950 if (call.IsDocumentation()) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3951 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3952 call.GetDocumentation() |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3953 .SetTag("System") |
| 4879 | 3954 .SetSummary("Delete a set of resources") |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3955 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3956 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3957 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3958 "whose identifiers are provided in the `Resources` field."); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3959 return; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3960 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3961 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3962 ServerContext& context = OrthancRestApi::GetContext(call); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3963 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3964 Json::Value request; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3965 if (!call.ParseJsonRequest(request) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3966 request.type() != Json::objectValue) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3967 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3968 throw OrthancException(ErrorCode_BadRequest, |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3969 "The body must contain a JSON object"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3970 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3971 else |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3972 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3973 std::set<std::string> resources; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3974 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3975 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3976 for (std::set<std::string>::const_iterator |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3977 it = resources.begin(); it != resources.end(); ++it) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3978 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3979 ResourceType type; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3980 Json::Value remainingAncestor; // Unused |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3981 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3982 if (!context.GetIndex().LookupResourceType(type, *it) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3983 !context.DeleteResource(remainingAncestor, *it, type)) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3984 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3985 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3986 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3987 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3988 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3989 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3990 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3991 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3992 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3993 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3994 void OrthancRestApi::RegisterResources() |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3995 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3996 Register("/instances", ListResources<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3997 Register("/patients", ListResources<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3998 Register("/series", ListResources<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3999 Register("/studies", ListResources<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4000 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4001 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4002 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4003 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4004 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4005 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4006 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4007 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4008 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4009 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4010 Register("/instances/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4011 Register("/patients/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4012 Register("/studies/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4013 Register("/series/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4014 |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4015 Register("/patients/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4016 Register("/series/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
4017 Register("/studies/{id}/shared-tags", GetSharedTags); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
4018 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4019 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4020 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4021 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4022 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4023 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
4024 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4025 Register("/instances/{id}/file", GetInstanceFile); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4026 Register("/instances/{id}/export", ExportInstanceFile); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4027 Register("/instances/{id}/tags", GetInstanceTags); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4028 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4029 Register("/instances/{id}/frames", ListFrames); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4030 |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
4031 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4032 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4033 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4034 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4035 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4036 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4037 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4038 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4039 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4040 Register("/instances/{id}/frames/{frame}/numpy", GetNumpyFrame); // New in Orthanc 1.10.0 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
4041 Register("/instances/{id}/pdf", ExtractPdf); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4042 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4043 Register("/instances/{id}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4044 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4045 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4046 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4047 Register("/instances/{id}/matlab", GetMatlabImage); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4048 Register("/instances/{id}/header", GetInstanceHeader); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4049 Register("/instances/{id}/numpy", GetNumpyInstance); // New in Orthanc 1.10.0 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4050 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4051 Register("/patients/{id}/protected", IsProtectedPatient); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4052 Register("/patients/{id}/protected", SetPatientProtection); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4053 |
| 4409 | 4054 std::vector<std::string> resourceTypes; |
| 4055 resourceTypes.push_back("patients"); | |
| 4056 resourceTypes.push_back("studies"); | |
| 4057 resourceTypes.push_back("series"); | |
| 4058 resourceTypes.push_back("instances"); | |
| 4059 | |
| 4060 for (size_t i = 0; i < resourceTypes.size(); i++) | |
| 4061 { | |
| 4062 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
| 4063 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
| 4064 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
| 4065 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4066 |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4067 // New in Orthanc 1.12.0 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4068 Register("/" + resourceTypes[i] + "/{id}/labels", ListLabels); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4069 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", GetLabel); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4070 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", RemoveLabel); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4071 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", AddLabel); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4072 |
| 4409 | 4073 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
| 4074 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
| 4075 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
| 4076 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
| 4077 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
| 4078 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
| 4079 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
| 4080 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
| 4081 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
| 4082 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
| 4083 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
| 4084 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
| 4085 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
4086 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/info", GetAttachmentInfo); |
| 4409 | 4087 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); |
| 4088 } | |
| 782 | 4089 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4090 Register("/tools/invalidate-tags", InvalidateTags); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4091 Register("/tools/lookup", Lookup); |
| 1354 | 4092 Register("/tools/find", Find); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4093 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4094 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4095 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4096 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4097 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4098 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4099 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4100 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4101 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4102 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4103 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4104 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4105 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4106 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4107 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4108 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4109 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4110 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4111 |
| 782 | 4112 Register("/instances/{id}/content/*", GetRawContent); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4113 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4114 Register("/series/{id}/ordered-slices", OrderSlices); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4115 Register("/series/{id}/numpy", GetNumpySeries); // New in Orthanc 1.10.0 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4116 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4117 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4118 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4119 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4120 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4121 Register("/tools/reconstruct", ReconstructAllResources); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4122 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4123 Register("/tools/bulk-content", BulkContent); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4124 Register("/tools/bulk-delete", BulkDelete); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4125 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4126 } |