Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 5405:62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
| author | Alain Mazy <am@osimis.io> |
|---|---|
| date | Tue, 17 Oct 2023 15:06:11 +0200 |
| parents | c5c00bee291a |
| children | 630d0195e3bb |
| rev | line source |
|---|---|
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU General Public License |
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "../PrecompiledHeadersServer.h" |
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24 #include "OrthancRestApi.h" |
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25 |
| 4045 | 26 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
| 27 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
| 28 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
| 29 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
| 30 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
| 31 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
| 32 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
| 33 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
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34 #include "../../../OrthancFramework/Sources/Images/NumpyWriter.h" |
| 4045 | 35 #include "../../../OrthancFramework/Sources/Logging.h" |
| 36 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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37 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
| 4045 | 38 |
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39 #include "../OrthancConfiguration.h" |
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40 #include "../Search/DatabaseLookup.h" |
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41 #include "../ServerContext.h" |
| 2131 | 42 #include "../ServerToolbox.h" |
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43 #include "../SliceOrdering.h" |
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44 |
| 3687 | 45 // This "include" is mandatory for Release builds using Linux Standard Base |
| 46 #include <boost/math/special_functions/round.hpp> | |
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47 #include <boost/shared_ptr.hpp> |
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48 |
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49 /** |
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50 * This semaphore is used to limit the number of concurrent HTTP |
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51 * requests on CPU-intensive routes of the REST API, in order to |
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52 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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53 **/ |
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54 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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55 |
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56 |
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57 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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58 |
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59 static const char* const IGNORE_LENGTH = "ignore-length"; |
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60 static const char* const RECONSTRUCT_FILES = "ReconstructFiles"; |
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61 |
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62 |
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63 namespace Orthanc |
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64 { |
| 4415 | 65 static std::string GetDocumentationSampleResource(ResourceType type) |
| 66 { | |
| 67 switch (type) | |
| 68 { | |
| 69 case Orthanc::ResourceType_Instance: | |
| 70 return "https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2"; | |
| 71 break; | |
| 72 | |
| 73 case Orthanc::ResourceType_Series: | |
| 74 return "https://demo.orthanc-server.com/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; | |
| 75 break; | |
| 76 | |
| 77 case Orthanc::ResourceType_Study: | |
| 78 return "https://demo.orthanc-server.com/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; | |
| 79 break; | |
| 80 | |
| 81 case Orthanc::ResourceType_Patient: | |
| 82 return "https://demo.orthanc-server.com/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; | |
| 83 break; | |
| 84 | |
| 85 default: | |
| 86 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 87 } | |
| 88 } | |
| 89 | |
| 90 | |
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91 static void AnswerDicomAsJson(RestApiCall& call, |
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92 const Json::Value& dicom, |
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93 DicomToJsonFormat mode) |
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94 { |
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95 if (mode != DicomToJsonFormat_Full) |
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96 { |
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97 Json::Value simplified; |
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98 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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99 call.GetOutput().AnswerJson(simplified); |
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100 } |
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101 else |
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102 { |
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103 call.GetOutput().AnswerJson(dicom); |
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104 } |
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105 } |
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106 |
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107 |
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108 static void ParseSetOfTags(std::set<DicomTag>& target, |
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109 const RestApiGetCall& call, |
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110 const std::string& argument) |
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111 { |
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112 target.clear(); |
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113 |
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114 if (call.HasArgument(argument)) |
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115 { |
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116 std::vector<std::string> tags; |
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117 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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118 |
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119 for (size_t i = 0; i < tags.size(); i++) |
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120 { |
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121 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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122 } |
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123 } |
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124 } |
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125 |
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126 |
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127 // List all the patients, studies, series or instances ---------------------- |
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128 |
| 1354 | 129 static void AnswerListOfResources(RestApiOutput& output, |
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130 ServerContext& context, |
| 1354 | 131 const std::list<std::string>& resources, |
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132 const std::map<std::string, std::string>& instancesIds, // optional: the id of an instance for each found resource. |
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133 const std::map<std::string, boost::shared_ptr<DicomMap> >& resourcesMainDicomTags, // optional: all tags read from DB for a resource (current level and upper levels) |
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134 const std::map<std::string, boost::shared_ptr<Json::Value> >& resourcesDicomAsJson, // optional: the dicom-as-json for each resource |
| 1354 | 135 ResourceType level, |
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136 bool expand, |
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137 DicomToJsonFormat format, |
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138 const std::set<DicomTag>& requestedTags, |
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139 bool allowStorageAccess) |
| 1354 | 140 { |
| 141 Json::Value answer = Json::arrayValue; | |
| 142 | |
| 143 for (std::list<std::string>::const_iterator | |
| 1384 | 144 resource = resources.begin(); resource != resources.end(); ++resource) |
| 1354 | 145 { |
| 146 if (expand) | |
| 147 { | |
| 4554 | 148 Json::Value expanded; |
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149 |
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150 std::map<std::string, std::string>::const_iterator instanceId = instancesIds.find(*resource); |
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151 if (instanceId != instancesIds.end()) // if it is found in instancesIds, it is also in resourcesDicomAsJson and mainDicomTags |
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152 { |
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153 // reuse data already collected before (e.g during lookup) |
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154 std::map<std::string, boost::shared_ptr<DicomMap> >::const_iterator mainDicomTags = resourcesMainDicomTags.find(*resource); |
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155 std::map<std::string, boost::shared_ptr<Json::Value> >::const_iterator dicomAsJson = resourcesDicomAsJson.find(*resource); |
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156 |
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157 context.ExpandResource(expanded, *resource, |
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158 *(mainDicomTags->second.get()), |
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159 instanceId->second, |
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160 dicomAsJson->second.get(), |
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161 level, format, requestedTags, allowStorageAccess); |
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162 } |
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163 else |
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164 { |
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165 context.ExpandResource(expanded, *resource, level, format, requestedTags, allowStorageAccess); |
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166 } |
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167 |
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168 if (expanded.type() == Json::objectValue) |
| 1354 | 169 { |
| 4554 | 170 answer.append(expanded); |
| 1354 | 171 } |
| 172 } | |
| 173 else | |
| 174 { | |
| 175 answer.append(*resource); | |
| 176 } | |
| 177 } | |
| 178 | |
| 179 output.AnswerJson(answer); | |
| 180 } | |
| 181 | |
| 182 | |
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183 static void AnswerListOfResources(RestApiOutput& output, |
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184 ServerContext& context, |
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185 const std::list<std::string>& resources, |
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186 ResourceType level, |
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187 bool expand, |
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188 DicomToJsonFormat format, |
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189 const std::set<DicomTag>& requestedTags, |
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190 bool allowStorageAccess) |
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191 { |
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192 std::map<std::string, std::string> unusedInstancesIds; |
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193 std::map<std::string, boost::shared_ptr<DicomMap> > unusedResourcesMainDicomTags; |
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194 std::map<std::string, boost::shared_ptr<Json::Value> > unusedResourcesDicomAsJson; |
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195 |
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196 AnswerListOfResources(output, context, resources, unusedInstancesIds, unusedResourcesMainDicomTags, unusedResourcesDicomAsJson, level, expand, format, requestedTags, allowStorageAccess); |
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197 } |
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198 |
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199 |
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200 template <enum ResourceType resourceType> |
| 974 | 201 static void ListResources(RestApiGetCall& call) |
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202 { |
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203 if (call.IsDocumentation()) |
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204 { |
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205 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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206 OrthancRestApi::DocumentRequestedTags(call); |
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207 |
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208 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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209 call.GetDocumentation() |
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210 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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211 .SetSummary("List the available " + resources) |
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212 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
| 4403 | 213 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
| 214 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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215 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
| 4403 | 216 "If present, retrieve detailed information about the individual " + resources, false) |
| 4404 | 217 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 218 "about the reported " + resources + " (if `expand` argument is provided)") | |
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219 .SetHttpGetSample("https://demo.orthanc-server.com/" + resources + "?since=0&limit=2", true); |
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220 return; |
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221 } |
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222 |
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223 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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224 ServerContext& context = OrthancRestApi::GetContext(call); |
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225 |
| 1354 | 226 std::list<std::string> result; |
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227 |
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228 std::set<DicomTag> requestedTags; |
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229 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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230 |
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231 if (call.HasArgument("limit") || |
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232 call.HasArgument("since")) |
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233 { |
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234 if (!call.HasArgument("limit")) |
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235 { |
| 2955 | 236 throw OrthancException(ErrorCode_BadRequest, |
| 237 "Missing \"limit\" argument for GET request against: " + | |
| 238 call.FlattenUri()); | |
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239 } |
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240 |
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241 if (!call.HasArgument("since")) |
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242 { |
| 2955 | 243 throw OrthancException(ErrorCode_BadRequest, |
| 244 "Missing \"since\" argument for GET request against: " + | |
| 245 call.FlattenUri()); | |
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246 } |
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247 |
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248 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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249 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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250 index.GetAllUuids(result, resourceType, since, limit); |
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251 } |
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252 else |
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253 { |
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254 index.GetAllUuids(result, resourceType); |
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255 } |
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256 |
|
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257 AnswerListOfResources(call.GetOutput(), context, result, resourceType, call.HasArgument("expand") && call.GetBooleanArgument("expand", true), |
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258 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), |
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259 requestedTags, |
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260 true /* allowStorageAccess */); |
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261 } |
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262 |
| 4409 | 263 |
| 264 | |
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265 template <enum ResourceType resourceType> |
| 974 | 266 static void GetSingleResource(RestApiGetCall& call) |
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267 { |
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268 if (call.IsDocumentation()) |
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269 { |
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270 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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271 OrthancRestApi::DocumentRequestedTags(call); |
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272 |
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273 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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274 call.GetDocumentation() |
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275 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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276 .SetSummary("Get information about some " + resource) |
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277 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 278 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 4409 | 279 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
| 280 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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281 return; |
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282 } |
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283 |
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284 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
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285 |
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286 std::set<DicomTag> requestedTags; |
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287 OrthancRestApi::GetRequestedTags(requestedTags, call); |
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288 |
| 4554 | 289 Json::Value json; |
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290 if (OrthancRestApi::GetContext(call).ExpandResource( |
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291 json, call.GetUriComponent("id", ""), resourceType, format, requestedTags, true /* allowStorageAccess */)) |
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292 { |
| 4554 | 293 call.GetOutput().AnswerJson(json); |
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294 } |
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295 } |
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296 |
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297 template <enum ResourceType resourceType> |
| 974 | 298 static void DeleteSingleResource(RestApiDeleteCall& call) |
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299 { |
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300 if (call.IsDocumentation()) |
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301 { |
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302 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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303 call.GetDocumentation() |
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304 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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305 .SetSummary("Delete some " + resource) |
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306 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 307 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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308 return; |
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309 } |
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310 |
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311 Json::Value remainingAncestor; |
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312 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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313 { |
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314 call.GetOutput().AnswerJson(remainingAncestor); |
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315 } |
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316 } |
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317 |
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318 |
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319 // Get information about a single patient ----------------------------------- |
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320 |
| 974 | 321 static void IsProtectedPatient(RestApiGetCall& call) |
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322 { |
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323 if (call.IsDocumentation()) |
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324 { |
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325 call.GetDocumentation() |
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326 .SetTag("Patients") |
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327 .SetSummary("Is the patient protected against recycling?") |
| 4404 | 328 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
| 4403 | 329 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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330 return; |
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331 } |
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332 |
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333 std::string publicId = call.GetUriComponent("id", ""); |
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334 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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335 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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336 } |
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337 |
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338 |
| 974 | 339 static void SetPatientProtection(RestApiPutCall& call) |
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340 { |
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341 if (call.IsDocumentation()) |
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342 { |
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343 call.GetDocumentation() |
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344 .SetTag("Patients") |
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345 .SetSummary("Protect one patient against recycling") |
| 4403 | 346 .SetDescription("Check out configuration options `MaximumStorageSize` and `MaximumPatientCount`") |
| 4404 | 347 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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348 return; |
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349 } |
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350 |
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351 ServerContext& context = OrthancRestApi::GetContext(call); |
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352 |
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353 std::string publicId = call.GetUriComponent("id", ""); |
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354 |
|
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355 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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356 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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357 } |
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358 |
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359 |
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360 // Get information about a single instance ---------------------------------- |
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361 |
| 974 | 362 static void GetInstanceFile(RestApiGetCall& call) |
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363 { |
|
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364 if (call.IsDocumentation()) |
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365 { |
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366 call.GetDocumentation() |
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367 .SetTag("Instances") |
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368 .SetSummary("Download DICOM") |
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369 .SetDescription("Download one DICOM instance") |
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370 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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371 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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372 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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373 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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374 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
|
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375 return; |
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376 } |
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377 |
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378 ServerContext& context = OrthancRestApi::GetContext(call); |
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379 |
|
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380 std::string publicId = call.GetUriComponent("id", ""); |
|
3203
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381 |
|
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382 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
|
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383 if (accept != call.GetHttpHeaders().end()) |
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384 { |
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385 // New in Orthanc 1.5.4 |
|
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386 try |
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387 { |
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388 MimeType mime = StringToMimeType(accept->second.c_str()); |
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389 |
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390 if (mime == MimeType_DicomWebJson || |
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391 mime == MimeType_DicomWebXml) |
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392 { |
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393 DicomWebJsonVisitor visitor; |
|
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394 |
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395 { |
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396 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
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397 locker.GetDicom().Apply(visitor); |
|
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398 } |
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399 |
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400 if (mime == MimeType_DicomWebJson) |
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401 { |
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402 std::string s = visitor.GetResult().toStyledString(); |
|
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403 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
|
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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404 } |
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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405 else |
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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|
406 { |
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|
407 std::string xml; |
|
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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|
408 visitor.FormatXml(xml); |
|
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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changeset
|
409 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
|
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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410 } |
|
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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411 |
|
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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412 return; |
|
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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413 } |
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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414 } |
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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changeset
|
415 catch (OrthancException&) |
|
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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416 { |
|
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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417 } |
|
810772486249
URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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418 } |
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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419 |
|
1146
200fcac0deb4
optimization for access to attachments
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420 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
|
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421 } |
|
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422 |
|
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parents:
diff
changeset
|
423 |
| 974 | 424 static void ExportInstanceFile(RestApiPostCall& call) |
|
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|
425 { |
| 4421 | 426 if (call.IsDocumentation()) |
| 427 { | |
| 428 call.GetDocumentation() | |
| 429 .SetTag("Instances") | |
| 430 .SetSummary("Write DICOM onto filesystem") | |
|
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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parents:
5185
diff
changeset
|
431 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running. This is insecure for " |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
changeset
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432 "Orthanc servers that are remotely accessible since one could overwrite any system file. " |
|
5275
8686476e9d12
fix inclusion of winsock.h
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parents:
5274
diff
changeset
|
433 "Since Orthanc 1.12.0, this route is disabled by default, but can be enabled using " |
|
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
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5274
diff
changeset
|
434 "the `RestApiWriteToFileSystemEnabled` configuration option.") |
| 4421 | 435 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
| 436 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
| 437 return; | |
| 438 } | |
| 439 | |
|
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diff
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|
440 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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refactoring of OrthancRestApi
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diff
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441 |
|
5200
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
442 if (!context.IsRestApiWriteToFileSystemEnabled()) |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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diff
changeset
|
443 { |
|
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New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
444 LOG(ERROR) << "The URI /instances/../export is disallowed for security, " |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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parents:
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diff
changeset
|
445 << "check your configuration option `RestApiWriteToFileSystemEnabled`"; |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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diff
changeset
|
446 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
447 return; |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
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parents:
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diff
changeset
|
448 } |
|
f8f1c4a9a216
New configuration option 'RestApiWriteToFileSystemEnabled'
Alain Mazy <am@osimis.io>
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diff
changeset
|
449 |
|
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parents:
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changeset
|
450 std::string publicId = call.GetUriComponent("id", ""); |
|
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refactoring of OrthancRestApi
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diff
changeset
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451 |
|
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parents:
diff
changeset
|
452 std::string dicom; |
| 2124 | 453 context.ReadDicom(dicom, publicId); |
|
751
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refactoring of OrthancRestApi
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|
454 |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
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parents:
1437
diff
changeset
|
455 std::string target; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
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parents:
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diff
changeset
|
456 call.BodyToString(target); |
| 2140 | 457 SystemToolbox::WriteFile(dicom, target); |
|
751
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
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458 |
|
2908
9d277f8ad698
new enumeration: MimeType
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parents:
2905
diff
changeset
|
459 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
751
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460 } |
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461 |
|
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refactoring of OrthancRestApi
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parents:
diff
changeset
|
462 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
463 template <DicomToJsonFormat format> |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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parents:
4694
diff
changeset
|
464 static void GetInstanceTagsInternal(RestApiGetCall& call) |
|
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465 { |
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|
466 ServerContext& context = OrthancRestApi::GetContext(call); |
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467 |
|
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diff
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468 std::string publicId = call.GetUriComponent("id", ""); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
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parents:
2408
diff
changeset
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469 |
|
e4045b3c9772
ignore-length argument if retrieving DICOM tags
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2408
diff
changeset
|
470 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
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parents:
4716
diff
changeset
|
471 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
751
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parents:
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472 |
|
2622
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New option "?short" to list DICOM tags using their hexadecimal ID
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diff
changeset
|
473 if (format != DicomToJsonFormat_Full || |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
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changeset
|
474 !ignoreTagLength.empty()) |
|
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|
475 { |
|
1146
200fcac0deb4
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1145
diff
changeset
|
476 Json::Value full; |
|
2409
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ignore-length argument if retrieving DICOM tags
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parents:
2408
diff
changeset
|
477 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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2447
diff
changeset
|
478 AnswerDicomAsJson(call, full, format); |
|
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|
479 } |
|
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480 else |
|
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parents:
diff
changeset
|
481 { |
|
3973
d86bddb50972
fix spelling errors according to debian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3928
diff
changeset
|
482 // This path allows one to avoid the JSON decoding if no |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
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2447
diff
changeset
|
483 // simplification is asked, and if no "ignore-length" argument |
|
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New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
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484 // is present |
|
4513
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simplification in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
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4473
diff
changeset
|
485 Json::Value full; |
| 2127 | 486 context.ReadDicomAsJson(full, publicId); |
|
4513
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simplification in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
487 call.GetOutput().AnswerJson(full); |
|
751
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diff
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|
488 } |
|
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489 } |
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490 |
|
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491 |
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492 static void GetInstanceTags(RestApiGetCall& call) |
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493 { |
| 4404 | 494 if (call.IsDocumentation()) |
| 495 { | |
|
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496 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 497 call.GetDocumentation() |
| 498 .SetTag("Instances") | |
| 499 .SetSummary("Get DICOM tags") | |
| 500 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
| 501 "combines hexadecimal tags with human-readable description.") | |
| 502 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
|
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503 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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504 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
| 4404 | 505 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
| 4415 | 506 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
| 4404 | 507 return; |
| 508 } | |
| 509 | |
|
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510 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
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511 { |
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512 case DicomToJsonFormat_Human: |
|
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513 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
|
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514 break; |
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515 |
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516 case DicomToJsonFormat_Short: |
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517 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call); |
|
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518 break; |
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519 |
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520 case DicomToJsonFormat_Full: |
|
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521 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call); |
|
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522 break; |
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523 |
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524 default: |
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525 throw OrthancException(ErrorCode_InternalError); |
|
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526 } |
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527 } |
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528 |
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529 |
|
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530 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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531 { |
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532 if (call.IsDocumentation()) |
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533 { |
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534 call.GetDocumentation() |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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535 .SetTag("Instances") |
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536 .SetSummary("Get human-readable tags") |
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537 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
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538 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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539 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
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540 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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541 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
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542 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
|
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543 return; |
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544 } |
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545 else |
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546 { |
|
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547 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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548 } |
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549 } |
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550 |
|
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551 |
| 974 | 552 static void ListFrames(RestApiGetCall& call) |
|
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553 { |
| 4414 | 554 if (call.IsDocumentation()) |
| 555 { | |
| 556 call.GetDocumentation() | |
| 557 .SetTag("Instances") | |
| 558 .SetSummary("List available frames") | |
| 559 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
| 560 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 561 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
| 562 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); | |
| 563 return; | |
| 564 } | |
| 565 | |
|
1950
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return a single raw frame from DICOM videos
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changeset
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566 std::string publicId = call.GetUriComponent("id", ""); |
|
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567 |
|
1950
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return a single raw frame from DICOM videos
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|
568 unsigned int numberOfFrames; |
|
533ff46e944b
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569 |
|
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570 { |
|
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return a single raw frame from DICOM videos
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571 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
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572 numberOfFrames = locker.GetDicom().GetFramesCount(); |
|
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573 } |
|
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return a single raw frame from DICOM videos
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574 |
|
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return a single raw frame from DICOM videos
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changeset
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575 Json::Value result = Json::arrayValue; |
|
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return a single raw frame from DICOM videos
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576 for (unsigned int i = 0; i < numberOfFrames; i++) |
|
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577 { |
|
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578 result.append(i); |
|
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579 } |
|
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580 |
|
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return a single raw frame from DICOM videos
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|
581 call.GetOutput().AnswerJson(result); |
|
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582 } |
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583 |
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584 |
|
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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changeset
|
585 namespace |
|
1781
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AcceptMediaDispatcher bootstrap
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diff
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586 { |
|
1784
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587 class ImageToEncode |
|
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588 { |
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589 private: |
|
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590 std::unique_ptr<ImageAccessor>& image_; |
|
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591 ImageExtractionMode mode_; |
|
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592 bool invert_; |
|
2908
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593 MimeType format_; |
|
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594 std::string answer_; |
|
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595 |
|
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596 public: |
|
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597 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
|
2281
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598 ImageExtractionMode mode, |
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599 bool invert) : |
|
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Refactoring leading to speedups with custom image decoders
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600 image_(image), |
|
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changeset
|
601 mode_(mode), |
| 4205 | 602 invert_(invert), |
| 603 format_(MimeType_Binary) | |
|
1784
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604 { |
|
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605 } |
|
2dbf25006f88
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changeset
|
606 |
|
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607 void Answer(RestApiOutput& output) |
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608 { |
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609 output.AnswerBuffer(answer_, format_); |
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610 } |
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611 |
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612 void EncodeUsingPng() |
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613 { |
|
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614 format_ = MimeType_Png; |
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615 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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616 } |
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617 |
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618 void EncodeUsingPam() |
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619 { |
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620 format_ = MimeType_Pam; |
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621 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
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622 } |
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623 |
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624 void EncodeUsingJpeg(uint8_t quality) |
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625 { |
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626 format_ = MimeType_Jpeg; |
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627 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
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628 } |
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629 }; |
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630 |
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631 class EncodePng : public HttpContentNegociation::IHandler |
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632 { |
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633 private: |
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634 ImageToEncode& image_; |
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635 |
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636 public: |
| 4205 | 637 explicit EncodePng(ImageToEncode& image) : image_(image) |
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638 { |
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639 } |
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640 |
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641 virtual void Handle(const std::string& type, |
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642 const std::string& subtype, |
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643 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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644 { |
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645 assert(type == "image"); |
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646 assert(subtype == "png"); |
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647 image_.EncodeUsingPng(); |
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648 } |
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649 }; |
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650 |
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651 class EncodePam : public HttpContentNegociation::IHandler |
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652 { |
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653 private: |
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654 ImageToEncode& image_; |
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655 |
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656 public: |
| 4205 | 657 explicit EncodePam(ImageToEncode& image) : image_(image) |
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658 { |
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659 } |
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660 |
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661 virtual void Handle(const std::string& type, |
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662 const std::string& subtype, |
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663 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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664 { |
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665 assert(type == "image"); |
| 2780 | 666 assert(subtype == "x-portable-arbitrarymap"); |
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667 image_.EncodeUsingPam(); |
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668 } |
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669 }; |
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670 |
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671 class EncodeJpeg : public HttpContentNegociation::IHandler |
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672 { |
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673 private: |
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674 ImageToEncode& image_; |
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675 unsigned int quality_; |
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676 |
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677 public: |
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678 EncodeJpeg(ImageToEncode& image, |
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679 const RestApiGetCall& call) : |
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680 image_(image) |
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681 { |
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682 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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683 bool ok = false; |
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684 |
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685 try |
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686 { |
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687 quality_ = boost::lexical_cast<unsigned int>(v); |
| 1847 | 688 ok = (quality_ >= 1 && quality_ <= 100); |
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689 } |
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690 catch (boost::bad_lexical_cast&) |
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691 { |
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692 } |
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693 |
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694 if (!ok) |
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695 { |
| 2955 | 696 throw OrthancException( |
| 697 ErrorCode_BadRequest, | |
| 698 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
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699 } |
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700 } |
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701 |
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702 virtual void Handle(const std::string& type, |
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703 const std::string& subtype, |
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704 const HttpContentNegociation::Dictionary& parameters) ORTHANC_OVERRIDE |
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705 { |
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706 assert(type == "image"); |
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707 assert(subtype == "jpeg"); |
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708 image_.EncodeUsingJpeg(quality_); |
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709 } |
|
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
710 }; |
|
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
711 } |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
712 |
|
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
713 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
714 namespace |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
715 { |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
716 class IDecodedFrameHandler : public boost::noncopyable |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
717 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
718 public: |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
719 virtual ~IDecodedFrameHandler() |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
720 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
721 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
722 |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
723 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
724 virtual void Handle(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
725 std::unique_ptr<ImageAccessor>& decoded, |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
726 const ParsedDicomFile* dicom, |
|
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
727 unsigned int frame) = 0; |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
728 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
729 virtual bool RequiresDicomTags() const = 0; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
730 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
731 static void Apply(RestApiGetCall& call, |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
732 IDecodedFrameHandler& handler, |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
733 ImageExtractionMode mode /* for generation of documentation */, |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
734 bool isRendered /* for generation of documentation */) |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
735 { |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
736 if (call.IsDocumentation()) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
737 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
738 std::string m; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
739 if (!isRendered) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
740 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
741 switch (mode) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
742 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
743 case ImageExtractionMode_Preview: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
744 m = "preview"; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
745 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
746 case ImageExtractionMode_UInt8: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
747 m = "uint8"; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
748 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
749 case ImageExtractionMode_UInt16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
750 m = "uint16"; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
751 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
752 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
753 m = "int16"; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
754 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
755 default: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
756 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
757 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
758 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
759 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
760 std::string description; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
761 std::string verb = (isRendered ? "Render" : "Decode"); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
762 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
763 if (call.HasUriComponent("frame")) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
764 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
765 description = verb + " one frame of interest from the given DICOM instance."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
766 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
767 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
768 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
769 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
770 else |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
771 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
772 description = verb + " the first frame of the given DICOM instance."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
773 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
774 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
775 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
776 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
777 if (isRendered) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
778 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
779 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
780 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
781 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
782 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
783 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
784 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
785 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
786 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
787 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
788 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
789 else |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
790 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
791 switch (mode) |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
792 { |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
793 case ImageExtractionMode_Preview: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
794 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
795 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
796 case ImageExtractionMode_UInt8: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
797 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
798 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
799 case ImageExtractionMode_UInt16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
800 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
801 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
802 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
803 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
804 "Negative values must be interpreted according to two's complement."); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
805 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
806 default: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
807 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
808 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
809 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
810 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
811 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
812 .SetTag("Instances") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
813 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
814 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
815 .SetHttpGetArgument("returnUnsupportedImage", RestApiCallDocumentation::Type_Boolean, "Returns an unsupported.png placeholder image if unable to provide the image instead of returning a 415 HTTP error (defaults to false)", false) |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
816 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
817 .AddAnswerType(MimeType_Png, "PNG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
818 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
819 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
820 .SetDescription(description); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
821 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
822 return; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
823 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
824 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
825 ServerContext& context = OrthancRestApi::GetContext(call); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
826 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
827 std::string frameId = call.GetUriComponent("frame", "0"); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
828 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
829 unsigned int frame; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
830 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
831 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
832 frame = boost::lexical_cast<unsigned int>(frameId); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
833 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
834 catch (boost::bad_lexical_cast&) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
835 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
836 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
837 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
838 |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
839 std::unique_ptr<ImageAccessor> decoded; |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
840 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
841 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
842 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
843 std::string publicId = call.GetUriComponent("id", ""); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
844 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
845 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
846 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
847 if (decoded.get() == NULL) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
848 { |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
849 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
850 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
851 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
852 |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
853 if (handler.RequiresDicomTags()) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
854 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
855 /** |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
856 * Retrieve a summary of the DICOM tags, which is |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
857 * necessary to deal with MONOCHROME1 photometric |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
858 * interpretation, and with windowing parameters. |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
859 **/ |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
860 ServerContext::DicomCacheLocker locker(context, publicId); |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
861 handler.Handle(call, decoded, &locker.GetDicom(), frame); |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
862 } |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
863 else |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
864 { |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
865 handler.Handle(call, decoded, NULL, frame); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
866 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
867 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
868 catch (OrthancException& e) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
869 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
870 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
871 e.GetErrorCode() == ErrorCode_UnknownResource) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
872 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
873 // The frame number is out of the range for this DICOM |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
874 // instance, the resource is not existent |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
875 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
876 else |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
877 { |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
878 if (call.HasArgument("returnUnsupportedImage")) |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
879 { |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
880 std::string root = ""; |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
881 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
882 { |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
883 root += "../"; |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
884 } |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
885 |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
886 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
887 } |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
888 else |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
889 { |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
890 call.GetOutput().SignalError(HttpStatus_415_UnsupportedMediaType); |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
891 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
892 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
893 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
894 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
895 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
896 } |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
897 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
898 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
899 static void DefaultHandler(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
900 std::unique_ptr<ImageAccessor>& decoded, |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
901 ImageExtractionMode mode, |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
902 bool invert) |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
903 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
904 ImageToEncode image(decoded, mode, invert); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
905 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
906 HttpContentNegociation negociation; |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
907 EncodePng png(image); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
908 negociation.Register(MIME_PNG, png); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
909 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
910 EncodeJpeg jpeg(image, call); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
911 negociation.Register(MIME_JPEG, jpeg); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
912 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
913 EncodePam pam(image); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
914 negociation.Register(MIME_PAM, pam); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
915 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
916 if (negociation.Apply(call.GetHttpHeaders())) |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
917 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
918 image.Answer(call.GetOutput()); |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
919 } |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
920 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
921 }; |
|
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
922 |
|
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
923 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
924 class GetImageHandler : public IDecodedFrameHandler |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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|
925 { |
|
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diff
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|
926 private: |
|
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diff
changeset
|
927 ImageExtractionMode mode_; |
|
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|
928 |
|
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diff
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|
929 public: |
| 4205 | 930 explicit GetImageHandler(ImageExtractionMode mode) : |
|
3683
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skeleton for new route: /instances/{id}/rendered
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|
931 mode_(mode) |
|
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|
932 { |
|
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|
933 } |
|
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|
934 |
|
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diff
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|
935 virtual void Handle(RestApiGetCall& call, |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
936 std::unique_ptr<ImageAccessor>& decoded, |
|
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|
937 const ParsedDicomFile* dicom, |
|
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Support detection of windowing and rescale in Philips multiframe images
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|
938 unsigned int frame) ORTHANC_OVERRIDE |
|
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939 { |
|
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|
940 bool invert = false; |
|
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|
941 |
|
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|
942 if (mode_ == ImageExtractionMode_Preview) |
|
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|
943 { |
|
4769
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diff
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|
944 if (dicom == NULL) |
|
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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diff
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|
945 { |
|
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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diff
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|
946 throw OrthancException(ErrorCode_InternalError); |
|
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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diff
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|
947 } |
|
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diff
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|
948 |
|
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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diff
changeset
|
949 DicomMap tags; |
|
9da6ca57a977
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diff
changeset
|
950 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
|
9da6ca57a977
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diff
changeset
|
951 |
|
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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diff
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|
952 DicomImageInformation info(tags); |
|
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953 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
|
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|
954 } |
|
3600
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/instances/{id}/preview route now takes the windowing into account
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parents:
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diff
changeset
|
955 |
|
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|
956 DefaultHandler(call, decoded, mode_, invert); |
|
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|
957 } |
|
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diff
changeset
|
958 |
|
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|
959 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
|
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960 { |
|
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|
961 return mode_ == ImageExtractionMode_Preview; |
|
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962 } |
|
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|
963 }; |
|
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|
964 |
|
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|
965 |
|
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changeset
|
966 class RenderedFrameHandler : public IDecodedFrameHandler |
|
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|
967 { |
|
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|
968 private: |
|
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|
969 static void GetUserArguments(double& windowWidth /* inout */, |
|
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|
970 double& windowCenter /* inout */, |
|
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|
971 unsigned int& argWidth, |
|
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|
972 unsigned int& argHeight, |
|
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|
973 bool& smooth, |
| 4205 | 974 const RestApiGetCall& call) |
|
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|
975 { |
|
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|
976 static const char* ARG_WINDOW_CENTER = "window-center"; |
|
a9ce35d67c3c
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|
977 static const char* ARG_WINDOW_WIDTH = "window-width"; |
|
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|
978 static const char* ARG_WIDTH = "width"; |
|
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|
979 static const char* ARG_HEIGHT = "height"; |
|
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|
980 static const char* ARG_SMOOTH = "smooth"; |
|
3600
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/instances/{id}/preview route now takes the windowing into account
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parents:
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changeset
|
981 |
|
4777
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Support detection of windowing and rescale in Philips multiframe images
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parents:
4769
diff
changeset
|
982 if (call.HasArgument(ARG_WINDOW_WIDTH) && |
|
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
983 !SerializationToolbox::ParseDouble(windowWidth, call.GetArgument(ARG_WINDOW_WIDTH, ""))) |
|
3685
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changeset
|
984 { |
|
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
985 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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Support detection of windowing and rescale in Philips multiframe images
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diff
changeset
|
986 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
|
3685
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|
987 } |
|
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changeset
|
988 |
|
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diff
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|
989 if (call.HasArgument(ARG_WINDOW_CENTER) && |
|
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Support detection of windowing and rescale in Philips multiframe images
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parents:
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diff
changeset
|
990 !SerializationToolbox::ParseDouble(windowCenter, call.GetArgument(ARG_WINDOW_CENTER, ""))) |
|
3683
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changeset
|
991 { |
|
4777
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
992 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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Support detection of windowing and rescale in Philips multiframe images
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|
993 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
|
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|
994 } |
|
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changeset
|
995 |
|
3690
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|
996 argWidth = 0; |
|
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diff
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|
997 argHeight = 0; |
|
3685
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changeset
|
998 |
|
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diff
changeset
|
999 if (call.HasArgument(ARG_WIDTH)) |
|
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rendering of RGB24
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changeset
|
1000 { |
|
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changeset
|
1001 try |
|
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changeset
|
1002 { |
|
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changeset
|
1003 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
|
3685
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rendering of RGB24
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changeset
|
1004 if (tmp < 0) |
|
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diff
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|
1005 { |
|
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changeset
|
1006 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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changeset
|
1007 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
|
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|
1008 } |
|
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|
1009 else |
|
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diff
changeset
|
1010 { |
|
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|
1011 argWidth = static_cast<unsigned int>(tmp); |
|
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1012 } |
|
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changeset
|
1013 } |
|
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changeset
|
1014 catch (boost::bad_lexical_cast&) |
|
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|
1015 { |
|
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diff
changeset
|
1016 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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changeset
|
1017 "Bad value for argument: " + std::string(ARG_WIDTH)); |
|
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diff
changeset
|
1018 } |
|
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changeset
|
1019 } |
|
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changeset
|
1020 |
|
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changeset
|
1021 if (call.HasArgument(ARG_HEIGHT)) |
|
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changeset
|
1022 { |
|
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changeset
|
1023 try |
|
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changeset
|
1024 { |
|
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changeset
|
1025 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
|
3685
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rendering of RGB24
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changeset
|
1026 if (tmp < 0) |
|
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diff
changeset
|
1027 { |
|
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changeset
|
1028 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
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diff
changeset
|
1029 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
|
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1030 } |
|
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|
1031 else |
|
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|
1032 { |
|
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1033 argHeight = static_cast<unsigned int>(tmp); |
|
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1034 } |
|
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1035 } |
|
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1036 catch (boost::bad_lexical_cast&) |
|
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1037 { |
|
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1038 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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1039 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
|
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1040 } |
|
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1041 } |
|
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1042 |
|
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1043 smooth = false; |
|
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1044 |
|
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1045 if (call.HasArgument(ARG_SMOOTH)) |
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1046 { |
|
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68f52897c119
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1047 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
|
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1048 } |
|
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1049 } |
|
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|
1050 |
|
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1051 |
|
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1052 public: |
|
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1053 virtual void Handle(RestApiGetCall& call, |
|
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1054 std::unique_ptr<ImageAccessor>& decoded, |
|
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|
1055 const ParsedDicomFile* dicom, |
|
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1056 unsigned int frame) ORTHANC_OVERRIDE |
|
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1057 { |
|
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1058 if (dicom == NULL) |
|
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|
1059 { |
|
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1060 throw OrthancException(ErrorCode_InternalError); |
|
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1061 } |
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|
1062 |
|
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1063 PhotometricInterpretation photometric; |
|
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1064 const bool invert = (dicom->LookupPhotometricInterpretation(photometric) && |
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|
1065 photometric == PhotometricInterpretation_Monochrome1); |
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1066 |
|
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1067 double rescaleIntercept, rescaleSlope, windowCenter, windowWidth; |
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1068 dicom->GetRescale(rescaleIntercept, rescaleSlope, frame); |
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|
1069 dicom->GetDefaultWindowing(windowCenter, windowWidth, frame); |
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|
1070 |
|
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1071 unsigned int argWidth, argHeight; |
|
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1072 bool smooth; |
|
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1073 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
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1074 |
|
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1075 unsigned int targetWidth = decoded->GetWidth(); |
|
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1076 unsigned int targetHeight = decoded->GetHeight(); |
| 3686 | 1077 |
| 1078 if (decoded->GetWidth() != 0 && | |
| 1079 decoded->GetHeight() != 0) | |
| 1080 { | |
| 1081 float ratio = 1; | |
| 1082 | |
|
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1083 if (argWidth != 0 && |
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1084 argHeight != 0) |
| 3686 | 1085 { |
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1086 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
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1087 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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1088 ratio = std::min(ratioX, ratioY); |
| 3686 | 1089 } |
|
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1090 else if (argWidth != 0) |
| 3686 | 1091 { |
|
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1092 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
| 3686 | 1093 } |
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1094 else if (argHeight != 0) |
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1095 { |
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1096 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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1097 } |
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1098 |
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1099 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
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1100 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
| 3686 | 1101 } |
| 1102 | |
|
5054
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1103 if (decoded->GetFormat() == PixelFormat_RGB24 || decoded->GetFormat() == PixelFormat_RGB48) |
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1104 { |
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1105 if (targetWidth == decoded->GetWidth() && |
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1106 targetHeight == decoded->GetHeight()) |
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1107 { |
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1108 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
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1109 } |
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1110 else |
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1111 { |
|
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|
1112 std::unique_ptr<ImageAccessor> resized( |
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1113 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
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1114 |
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1115 if (smooth && |
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1116 (targetWidth < decoded->GetWidth() || |
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1117 targetHeight < decoded->GetHeight())) |
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1118 { |
|
4065
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|
1119 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
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1120 } |
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1121 |
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1122 ImageProcessing::Resize(*resized, *decoded); |
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1123 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
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1124 } |
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1125 } |
| 3686 | 1126 else |
| 1127 { | |
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1128 // Grayscale image: (1) convert to Float32, (2) apply |
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1129 // windowing to get a Grayscale8, (3) possibly resize |
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1130 |
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1131 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
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1132 ImageProcessing::Convert(converted, *decoded); |
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1133 |
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1134 // Avoid divisions by zero |
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1135 if (windowWidth <= 1.0f) |
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1136 { |
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1137 windowWidth = 1; |
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1138 } |
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1139 |
|
4834
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download of numpy arrays from the REST API
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1140 if (std::abs(rescaleSlope) <= 0.0001) |
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1141 { |
|
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1142 rescaleSlope = 0.0001; |
|
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1143 } |
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1144 |
|
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1145 const double scaling = 255.0 * rescaleSlope / windowWidth; |
|
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1146 const double offset = (rescaleIntercept - windowCenter + windowWidth / 2.0) / rescaleSlope; |
|
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1147 |
|
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1148 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
|
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1149 ImageProcessing::ShiftScale(*rescaled, converted, static_cast<float>(offset), static_cast<float>(scaling), false); |
|
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1150 |
|
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|
1151 if (targetWidth == decoded->GetWidth() && |
|
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1152 targetHeight == decoded->GetHeight()) |
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1153 { |
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1154 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
|
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1155 } |
|
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1156 else |
|
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1157 { |
|
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1158 std::unique_ptr<ImageAccessor> resized( |
|
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1159 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
|
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1160 |
|
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|
1161 if (smooth && |
|
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1162 (targetWidth < decoded->GetWidth() || |
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1163 targetHeight < decoded->GetHeight())) |
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1164 { |
|
4065
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1165 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
|
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1166 } |
|
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1167 |
|
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1168 ImageProcessing::Resize(*resized, *rescaled); |
|
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1169 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
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1170 } |
| 3686 | 1171 } |
|
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1172 } |
|
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1173 |
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1174 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
|
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1175 { |
|
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1176 return true; |
|
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1177 } |
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1178 }; |
|
3600
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1179 } |
|
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1180 |
|
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1181 |
|
751
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|
1182 template <enum ImageExtractionMode mode> |
| 974 | 1183 static void GetImage(RestApiGetCall& call) |
|
751
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1184 { |
|
3926
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|
1185 Semaphore::Locker locker(throttlingSemaphore_); |
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1186 |
|
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1187 GetImageHandler handler(mode); |
|
4406
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1188 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
|
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1189 } |
|
1906
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1190 |
|
1826
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1191 |
|
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1192 static void GetRenderedFrame(RestApiGetCall& call) |
|
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1193 { |
|
3926
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1194 Semaphore::Locker locker(throttlingSemaphore_); |
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1195 |
|
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|
1196 RenderedFrameHandler handler; |
|
4406
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|
1197 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
|
751
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1198 } |
|
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|
1199 |
|
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|
1200 |
|
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1201 static void DocumentSharedNumpy(RestApiGetCall& call) |
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1202 { |
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1203 call.GetDocumentation() |
|
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1204 .SetUriArgument("id", "Orthanc identifier of the DICOM resource of interest") |
|
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1205 .SetHttpGetArgument("compress", RestApiCallDocumentation::Type_Boolean, "Compress the file as `.npz`", false) |
|
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1206 .SetHttpGetArgument("rescale", RestApiCallDocumentation::Type_Boolean, |
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1207 "On grayscale images, apply the rescaling and return floating-point values", false) |
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1208 .AddAnswerType(MimeType_PlainText, "Numpy file: https://numpy.org/devdocs/reference/generated/numpy.lib.format.html"); |
|
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1209 } |
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1210 |
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1211 |
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1212 namespace |
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1213 { |
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|
1214 class NumpyVisitor : public boost::noncopyable |
|
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1215 { |
|
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1216 private: |
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1217 bool rescale_; |
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1218 unsigned int depth_; |
|
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|
1219 unsigned int currentDepth_; |
| 4858 | 1220 unsigned int width_; |
|
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1221 unsigned int height_; |
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1222 PixelFormat format_; |
|
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|
1223 ChunkedBuffer buffer_; |
|
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1224 |
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1225 public: |
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1226 NumpyVisitor(unsigned int depth /* can be zero if 2D frame */, |
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1227 bool rescale) : |
|
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1228 rescale_(rescale), |
|
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|
1229 depth_(depth), |
| 4858 | 1230 currentDepth_(0), |
| 1231 width_(0), // dummy initialization | |
| 1232 height_(0), // dummy initialization | |
| 1233 format_(PixelFormat_Grayscale8) // dummy initialization | |
|
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1234 { |
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1235 } |
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1236 |
| 4858 | 1237 void WriteFrame(const ParsedDicomFile& dicom, |
|
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1238 unsigned int frame) |
|
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1239 { |
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1240 std::unique_ptr<ImageAccessor> decoded(dicom.DecodeFrame(frame)); |
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1241 |
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|
1242 if (decoded.get() == NULL) |
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1243 { |
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1244 throw OrthancException(ErrorCode_NotImplemented, "Cannot decode DICOM instance"); |
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1245 } |
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1246 |
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|
1247 if (currentDepth_ == 0) |
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1248 { |
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|
1249 width_ = decoded->GetWidth(); |
|
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|
1250 height_ = decoded->GetHeight(); |
|
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|
1251 format_ = decoded->GetFormat(); |
|
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1252 } |
|
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|
1253 else if (width_ != decoded->GetWidth() || |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1254 height_ != decoded->GetHeight()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1255 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
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|
1256 throw OrthancException(ErrorCode_IncompatibleImageSize, "The size of the frames varies across the instance(s)"); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1257 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1258 else if (format_ != decoded->GetFormat()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1259 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1260 throw OrthancException(ErrorCode_IncompatibleImageFormat, "The pixel format of the frames varies across the instance(s)"); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1261 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1262 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1263 if (rescale_ && |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1264 decoded->GetFormat() != PixelFormat_RGB24) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1265 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1266 if (currentDepth_ == 0) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1267 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1268 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, PixelFormat_Float32); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1269 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1270 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1271 double rescaleIntercept, rescaleSlope; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1272 dicom.GetRescale(rescaleIntercept, rescaleSlope, frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1273 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1274 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1275 ImageProcessing::Convert(converted, *decoded); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1276 ImageProcessing::ShiftScale2(converted, static_cast<float>(rescaleIntercept), static_cast<float>(rescaleSlope), false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1277 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1278 NumpyWriter::WritePixels(buffer_, converted); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1279 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1280 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1281 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1282 if (currentDepth_ == 0) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1283 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1284 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, format_); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1285 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1286 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1287 NumpyWriter::WritePixels(buffer_, *decoded); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1288 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1289 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1290 currentDepth_ ++; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1291 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1292 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1293 void Answer(RestApiOutput& output, |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1294 bool compress) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1295 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1296 if ((depth_ == 0 && currentDepth_ != 1) || |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1297 (depth_ != 0 && currentDepth_ != depth_)) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1298 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1299 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1300 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1301 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1302 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1303 std::string answer; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1304 NumpyWriter::Finalize(answer, buffer_, compress); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1305 output.AnswerBuffer(answer, MimeType_Binary); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1306 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1307 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1308 }; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1309 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1310 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1311 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1312 static void GetNumpyFrame(RestApiGetCall& call) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1313 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1314 if (call.IsDocumentation()) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1315 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1316 DocumentSharedNumpy(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1317 call.GetDocumentation() |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1318 .SetTag("Instances") |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1319 .SetSummary("Decode frame for numpy") |
|
4836
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4834
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|
1320 .SetDescription("Decode one frame of interest from the given DICOM instance, for use with numpy in Python. " |
|
ec1e9571b645
document number of dimensions in numpy arrays
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diff
changeset
|
1321 "The numpy array has 3 dimensions: (height, width, color channel).") |
|
4834
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|
1322 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
bec432ee1094
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|
1323 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1324 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1325 { |
|
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diff
changeset
|
1326 const std::string instanceId = call.GetUriComponent("id", ""); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1327 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1328 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1329 |
|
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parents:
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diff
changeset
|
1330 uint32_t frame; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1331 if (!SerializationToolbox::ParseUnsignedInteger32(frame, call.GetUriComponent("frame", "0"))) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1332 { |
|
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parents:
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diff
changeset
|
1333 throw OrthancException(ErrorCode_ParameterOutOfRange, "Expected an unsigned integer for the \"frame\" argument"); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1334 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1335 |
|
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diff
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|
1336 NumpyVisitor visitor(0 /* no depth, 2D frame */, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
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parents:
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diff
changeset
|
1337 |
|
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changeset
|
1338 { |
|
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parents:
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diff
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|
1339 Semaphore::Locker throttling(throttlingSemaphore_); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1340 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1341 |
|
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parents:
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diff
changeset
|
1342 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
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parents:
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diff
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|
1343 } |
|
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diff
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|
1344 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1345 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
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diff
changeset
|
1346 } |
|
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diff
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|
1347 } |
|
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diff
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|
1348 |
|
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diff
changeset
|
1349 |
|
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diff
changeset
|
1350 static void GetNumpyInstance(RestApiGetCall& call) |
|
bec432ee1094
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|
1351 { |
|
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diff
changeset
|
1352 if (call.IsDocumentation()) |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1353 { |
|
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download of numpy arrays from the REST API
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parents:
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diff
changeset
|
1354 DocumentSharedNumpy(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1355 call.GetDocumentation() |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1356 .SetTag("Instances") |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1357 .SetSummary("Decode instance for numpy") |
|
4836
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document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1358 .SetDescription("Decode the given DICOM instance, for use with numpy in Python. " |
|
ec1e9571b645
document number of dimensions in numpy arrays
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4834
diff
changeset
|
1359 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1360 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1361 else |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1362 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1363 const std::string instanceId = call.GetUriComponent("id", ""); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1364 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
1365 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1366 |
|
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diff
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|
1367 { |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1368 Semaphore::Locker throttling(throttlingSemaphore_); |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1369 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
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diff
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|
1370 |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1371 const unsigned int depth = locker.GetDicom().GetFramesCount(); |
|
bec432ee1094
download of numpy arrays from the REST API
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diff
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|
1372 if (depth == 0) |
|
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download of numpy arrays from the REST API
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1373 { |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1374 throw OrthancException(ErrorCode_BadFileFormat, "Empty DICOM instance"); |
|
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1375 } |
|
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download of numpy arrays from the REST API
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|
1376 |
|
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|
1377 NumpyVisitor visitor(depth, rescale); |
|
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download of numpy arrays from the REST API
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diff
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|
1378 |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1379 for (unsigned int frame = 0; frame < depth; frame++) |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1380 { |
|
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|
1381 visitor.WriteFrame(locker.GetDicom(), frame); |
|
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1382 } |
|
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|
1383 |
|
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|
1384 visitor.Answer(call.GetOutput(), compress); |
|
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1385 } |
|
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1386 } |
|
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|
1387 } |
|
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|
1388 |
|
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|
1389 |
|
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|
1390 static void GetNumpySeries(RestApiGetCall& call) |
|
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1391 { |
|
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1392 if (call.IsDocumentation()) |
|
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|
1393 { |
|
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|
1394 DocumentSharedNumpy(call); |
|
bec432ee1094
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|
1395 call.GetDocumentation() |
|
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download of numpy arrays from the REST API
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|
1396 .SetTag("Series") |
|
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|
1397 .SetSummary("Decode series for numpy") |
|
4836
ec1e9571b645
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1398 .SetDescription("Decode the given DICOM series, for use with numpy in Python. " |
|
ec1e9571b645
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1399 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
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1400 } |
|
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|
1401 else |
|
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download of numpy arrays from the REST API
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|
1402 { |
|
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|
1403 const std::string seriesId = call.GetUriComponent("id", ""); |
|
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|
1404 const bool compress = call.GetBooleanArgument("compress", false); |
|
bec432ee1094
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1405 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1406 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1407 Semaphore::Locker throttling(throttlingSemaphore_); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1408 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1409 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1410 SliceOrdering ordering(index, seriesId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1411 |
|
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download of numpy arrays from the REST API
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|
1412 unsigned int depth = 0; |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1413 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
bec432ee1094
download of numpy arrays from the REST API
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diff
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|
1414 { |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1415 depth += ordering.GetFramesCount(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1416 } |
|
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download of numpy arrays from the REST API
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|
1417 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1418 ServerContext& context = OrthancRestApi::GetContext(call); |
|
bec432ee1094
download of numpy arrays from the REST API
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diff
changeset
|
1419 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1420 NumpyVisitor visitor(depth, rescale); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1421 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1422 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1423 { |
|
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download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1424 const std::string& instanceId = ordering.GetInstanceId(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1425 unsigned int framesCount = ordering.GetFramesCount(i); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1426 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1427 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1428 ServerContext::DicomCacheLocker locker(context, instanceId); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1429 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1430 for (unsigned int frame = 0; frame < framesCount; frame++) |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1431 { |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1432 visitor.WriteFrame(locker.GetDicom(), frame); |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1433 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1434 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1435 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1436 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1437 visitor.Answer(call.GetOutput(), compress); |
|
bec432ee1094
download of numpy arrays from the REST API
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diff
changeset
|
1438 } |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1439 } |
|
bec432ee1094
download of numpy arrays from the REST API
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diff
changeset
|
1440 |
|
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1441 |
| 974 | 1442 static void GetMatlabImage(RestApiGetCall& call) |
|
874
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1443 { |
| 4414 | 1444 if (call.IsDocumentation()) |
| 1445 { | |
| 1446 std::string description; | |
| 1447 | |
| 1448 if (call.HasUriComponent("frame")) | |
| 1449 { | |
| 1450 description = "Decode one frame of interest from the given DICOM instance"; | |
| 1451 call.GetDocumentation() | |
| 1452 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
| 1453 } | |
| 1454 else | |
| 1455 { | |
| 1456 description = "Decode the first frame of the given DICOM instance."; | |
| 1457 } | |
| 1458 | |
| 1459 call.GetDocumentation() | |
| 1460 .SetTag("Instances") | |
| 1461 .SetSummary("Decode frame for Matlab") | |
| 1462 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
| 1463 "https://book.orthanc-server.com/faq/matlab.html") | |
| 1464 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 1465 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
| 1466 return; | |
| 1467 } | |
| 1468 | |
|
3926
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1469 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
Allow concurrent calls to the custom image decoders provided by the plugins
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diff
changeset
|
1470 |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1471 ServerContext& context = OrthancRestApi::GetContext(call); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1472 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1473 std::string frameId = call.GetUriComponent("frame", "0"); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1474 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1475 unsigned int frame; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1476 try |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1477 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1478 frame = boost::lexical_cast<unsigned int>(frameId); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1479 } |
|
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1480 catch (boost::bad_lexical_cast&) |
|
874
87791ebc1f50
download matlab images
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parents:
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diff
changeset
|
1481 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1482 return; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1483 } |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1484 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1485 std::string publicId = call.GetUriComponent("id", ""); |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1486 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
|
874
87791ebc1f50
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diff
changeset
|
1487 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1488 if (decoded.get() == NULL) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1489 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1490 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1491 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1492 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1493 else |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1494 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1495 std::string result; |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1496 decoded->ToMatlabString(result); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1497 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1498 } |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1499 } |
|
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1500 |
|
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1501 |
|
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1502 template <bool GzipCompression> |
|
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1503 static void GetRawFrame(RestApiGetCall& call) |
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1504 { |
| 4408 | 1505 if (call.IsDocumentation()) |
| 1506 { | |
| 1507 call.GetDocumentation() | |
| 1508 .SetTag("Instances") | |
| 1509 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
| 1510 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
| 1511 "bypassing image decoding. This is notably useful to access the source files " | |
| 1512 "in compressed transfer syntaxes." + | |
| 1513 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
|
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1514 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
| 4408 | 1515 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
| 1516 | |
| 1517 if (GzipCompression) | |
| 1518 { | |
| 1519 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
| 1520 } | |
| 1521 else | |
| 1522 { | |
| 1523 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
| 1524 } | |
| 1525 return; | |
| 1526 } | |
| 1527 | |
|
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1528 std::string frameId = call.GetUriComponent("frame", "0"); |
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1529 |
|
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1530 unsigned int frame; |
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1531 try |
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1532 { |
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1533 frame = boost::lexical_cast<unsigned int>(frameId); |
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1534 } |
|
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1535 catch (boost::bad_lexical_cast&) |
|
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1536 { |
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1537 return; |
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1538 } |
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1539 |
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1540 std::string publicId = call.GetUriComponent("id", ""); |
|
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1541 std::string raw; |
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1542 MimeType mime; |
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1543 |
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1544 { |
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1545 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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1546 locker.GetDicom().GetRawFrame(raw, mime, frame); |
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1547 } |
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1548 |
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1549 if (GzipCompression) |
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1550 { |
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1551 GzipCompressor gzip; |
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1552 std::string compressed; |
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1553 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
|
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1554 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
|
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1555 } |
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1556 else |
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1557 { |
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1558 call.GetOutput().AnswerBuffer(raw, mime); |
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1559 } |
|
1924
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1560 } |
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1561 |
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1562 |
| 974 | 1563 static void GetResourceStatistics(RestApiGetCall& call) |
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1564 { |
| 4418 | 1565 if (call.IsDocumentation()) |
| 1566 { | |
| 1567 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1568 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1569 call.GetDocumentation() | |
| 1570 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1571 .SetSummary("Get " + r + " statistics") | |
| 1572 .SetDescription("Get statistics about the given " + r) | |
| 1573 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1574 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
| 1575 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1576 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1577 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
| 1578 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1579 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1580 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1581 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
| 1582 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
| 1583 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
| 1584 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1585 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1586 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1587 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1588 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1589 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1590 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1591 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
| 1592 | |
| 1593 switch (t) | |
| 1594 { | |
| 1595 // Do NOT add "break" below this point! | |
| 1596 case ResourceType_Patient: | |
| 1597 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
| 1598 "Number of child studies within this " + r); | |
| 1599 | |
| 1600 case ResourceType_Study: | |
| 1601 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
| 1602 "Number of child series within this " + r); | |
| 1603 | |
| 1604 case ResourceType_Series: | |
| 1605 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
| 1606 "Number of child instances within this " + r); | |
| 1607 | |
| 1608 case ResourceType_Instance: | |
| 1609 default: | |
| 1610 break; | |
| 1611 } | |
| 1612 | |
| 1613 return; | |
| 1614 } | |
| 1615 | |
|
3174
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1616 static const uint64_t MEGA_BYTES = 1024 * 1024; |
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1617 |
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1618 std::string publicId = call.GetUriComponent("id", ""); |
|
3174
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1619 |
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1620 ResourceType type; |
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1621 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
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1622 unsigned int countStudies, countSeries, countInstances; |
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1623 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
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1624 type, diskSize, uncompressedSize, countStudies, countSeries, |
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1625 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
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1626 |
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1627 Json::Value result = Json::objectValue; |
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1628 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1629 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1630 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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1631 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
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1632 |
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1633 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
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1634 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1635 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
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1636 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
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1637 |
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1638 switch (type) |
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1639 { |
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1640 // Do NOT add "break" below this point! |
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1641 case ResourceType_Patient: |
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1642 result["CountStudies"] = countStudies; |
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1643 |
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1644 case ResourceType_Study: |
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1645 result["CountSeries"] = countSeries; |
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1646 |
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1647 case ResourceType_Series: |
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1648 result["CountInstances"] = countInstances; |
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1649 |
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1650 case ResourceType_Instance: |
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1651 default: |
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1652 break; |
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1653 } |
|
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primitives to collect metrics in Orthanc
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1654 |
|
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|
1655 call.GetOutput().AnswerJson(result); |
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1656 } |
|
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|
1657 |
|
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|
1658 |
|
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|
1659 |
|
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|
1660 // Handling of metadata ----------------------------------------------------- |
|
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|
1661 |
| 4205 | 1662 static void CheckValidResourceType(const RestApiCall& call) |
|
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|
1663 { |
|
4460
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
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|
1664 assert(!call.GetFullUri().empty()); |
| 4409 | 1665 const std::string resourceType = call.GetFullUri() [0]; |
|
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|
1666 StringToResourceType(resourceType.c_str()); |
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|
1667 } |
|
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|
1668 |
|
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|
1669 |
| 974 | 1670 static void ListMetadata(RestApiGetCall& call) |
|
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|
1671 { |
| 4414 | 1672 if (call.IsDocumentation()) |
| 1673 { | |
| 1674 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1675 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1676 call.GetDocumentation() | |
| 1677 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1678 .SetSummary("List metadata") | |
| 1679 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
| 1680 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1681 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
| 1682 "If present, also retrieve the value of the individual metadata", false) | |
|
5274
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|
1683 .SetHttpGetArgument("numeric", RestApiCallDocumentation::Type_String, |
|
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|
1684 "If present, use the numeric identifier of the metadata instead of its symbolic name", false) |
| 4414 | 1685 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " |
| 1686 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
| 1687 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
| 1688 return; | |
| 1689 } | |
| 1690 | |
|
4460
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|
1691 assert(!call.GetFullUri().empty()); |
| 4554 | 1692 const std::string publicId = call.GetUriComponent("id", ""); |
| 1693 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
|
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|
1694 |
|
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|
1695 typedef std::map<MetadataType, std::string> Metadata; |
|
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|
1696 |
|
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|
1697 Metadata metadata; |
| 4554 | 1698 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
|
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|
1699 |
|
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|
1700 Json::Value result; |
|
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1701 |
|
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|
1702 bool isNumeric = call.HasArgument("numeric"); |
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|
1703 |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
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diff
changeset
|
1704 if (call.HasArgument("expand") && call.GetBooleanArgument("expand", true)) |
|
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|
1705 { |
|
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|
1706 result = Json::objectValue; |
|
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|
1707 |
|
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|
1708 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
|
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|
1709 { |
|
5274
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|
1710 std::string key; |
|
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|
1711 if (isNumeric) |
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|
1712 { |
|
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|
1713 key = boost::lexical_cast<std::string>(it->first); |
|
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|
1714 } |
|
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|
1715 else |
|
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|
1716 { |
|
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|
1717 key = EnumerationToString(it->first); |
|
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Added option "?numeric" if listing metadata
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|
1718 } |
|
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|
1719 |
|
3187
4bbadcd03966
refactoring retrieval of metadata from database
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diff
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|
1720 result[key] = it->second; |
|
5274
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Added option "?numeric" if listing metadata
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|
1721 } |
|
2726
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|
1722 } |
|
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|
1723 else |
|
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|
1724 { |
|
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|
1725 result = Json::arrayValue; |
|
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|
1726 |
|
4551
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4514
diff
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|
1727 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
|
2726
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1728 { |
|
5274
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Added option "?numeric" if listing metadata
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|
1729 if (isNumeric) |
|
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|
1730 { |
|
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|
1731 result.append(it->first); |
|
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|
1732 } |
|
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Added option "?numeric" if listing metadata
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|
1733 else |
|
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Added option "?numeric" if listing metadata
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|
1734 { |
|
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Added option "?numeric" if listing metadata
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|
1735 result.append(EnumerationToString(it->first)); |
|
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Added option "?numeric" if listing metadata
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|
1736 } |
|
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|
1737 } |
|
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|
1738 } |
|
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changeset
|
1739 |
|
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|
1740 call.GetOutput().AnswerJson(result); |
|
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|
1741 } |
|
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|
1742 |
|
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|
1743 |
| 4657 | 1744 static void SetStringContentETag(const RestApiOutput& output, |
| 1745 int64_t revision, | |
| 1746 const std::string& value) | |
|
4640
66109d24d26e
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diff
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|
1747 { |
|
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|
1748 std::string md5; |
|
66109d24d26e
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|
1749 Toolbox::ComputeMD5(md5, value); |
|
66109d24d26e
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|
1750 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
|
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diff
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|
1751 output.GetLowLevelOutput().AddHeader("ETag", etag); |
|
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|
1752 } |
|
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|
1753 |
|
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|
1754 |
| 4657 | 1755 static void SetBufferContentETag(const RestApiOutput& output, |
|
4640
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|
1756 int64_t revision, |
|
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|
1757 const void* data, |
|
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|
1758 size_t size) |
|
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|
1759 { |
|
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|
1760 std::string md5; |
|
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|
1761 Toolbox::ComputeMD5(md5, data, size); |
|
66109d24d26e
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|
1762 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
|
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|
1763 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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|
1764 } |
|
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|
1765 |
|
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|
1766 |
| 4657 | 1767 static void SetAttachmentETag(const RestApiOutput& output, |
|
4640
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|
1768 int64_t revision, |
|
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|
1769 const FileInfo& info) |
|
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|
1770 { |
|
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|
1771 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
|
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changeset
|
1772 info.GetUncompressedMD5() + "\""); |
|
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|
1773 output.GetLowLevelOutput().AddHeader("ETag", etag); |
|
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|
1774 } |
|
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|
1775 |
|
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|
1776 |
|
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|
1777 static std::string GetMD5(const std::string& value) |
|
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|
1778 { |
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1779 std::string md5; |
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1780 Toolbox::ComputeMD5(md5, value); |
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1781 return md5; |
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1782 } |
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1783 |
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1784 |
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1785 static bool GetRevisionHeader(int64_t& revision /* out */, |
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1786 std::string& md5 /* out */, |
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1787 const RestApiCall& call, |
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1788 const std::string& header) |
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1789 { |
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1790 std::string lower; |
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1791 Toolbox::ToLowerCase(lower, header); |
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1792 |
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1793 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1794 if (found == call.GetHttpHeaders().end()) |
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1795 { |
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1796 return false; |
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1797 } |
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1798 else |
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1799 { |
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1800 std::string value = Toolbox::StripSpaces(found->second); |
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1801 Toolbox::RemoveSurroundingQuotes(value); |
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1802 |
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1803 try |
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1804 { |
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1805 size_t comma = value.find('-'); |
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1806 if (comma != std::string::npos) |
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1807 { |
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1808 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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1809 md5 = value.substr(comma + 1); |
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1810 return true; |
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1811 } |
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1812 } |
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1813 catch (boost::bad_lexical_cast&) |
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1814 { |
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1815 } |
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1816 |
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1817 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1818 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
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1819 } |
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1820 } |
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1821 |
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1822 |
| 974 | 1823 static void GetMetadata(RestApiGetCall& call) |
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1824 { |
| 4414 | 1825 if (call.IsDocumentation()) |
| 1826 { | |
| 1827 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1828 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1829 call.GetDocumentation() | |
| 1830 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1831 .SetSummary("Get metadata") | |
| 1832 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
| 1833 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1834 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1835 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1836 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1837 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4414 | 1838 return; |
| 1839 } | |
| 1840 | |
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1841 assert(!call.GetFullUri().empty()); |
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1842 const std::string publicId = call.GetUriComponent("id", ""); |
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1843 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1844 |
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1845 std::string name = call.GetUriComponent("name", ""); |
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1846 MetadataType metadata = StringToMetadata(name); |
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1847 |
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1848 std::string value; |
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1849 int64_t revision; |
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1850 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1851 { |
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1852 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
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1853 |
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1854 int64_t userRevision; |
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1855 std::string userMD5; |
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1856 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1857 userRevision == revision && |
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1858 userMD5 == GetMD5(value)) |
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1859 { |
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1860 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1861 } |
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1862 else |
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1863 { |
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1864 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1865 } |
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1866 } |
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1867 } |
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1868 |
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1869 |
| 974 | 1870 static void DeleteMetadata(RestApiDeleteCall& call) |
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1871 { |
| 4414 | 1872 if (call.IsDocumentation()) |
| 1873 { | |
| 1874 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1875 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1876 call.GetDocumentation() | |
| 1877 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1878 .SetSummary("Delete metadata") | |
| 1879 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
| 1880 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
| 1881 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
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1882 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
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1883 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
|
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1884 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4414 | 1885 return; |
| 1886 } | |
| 1887 | |
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1888 CheckValidResourceType(call); |
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1889 const std::string publicId = call.GetUriComponent("id", ""); |
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1890 |
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1891 std::string name = call.GetUriComponent("name", ""); |
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1892 MetadataType metadata = StringToMetadata(name); |
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1893 |
|
1773
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1894 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
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1895 { |
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1896 bool found; |
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1897 int64_t revision; |
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1898 std::string md5; |
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1899 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
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1900 { |
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1901 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
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1902 } |
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1903 else |
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1904 { |
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1905 OrthancConfiguration::ReaderLock lock; |
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1906 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1907 { |
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1908 throw OrthancException(ErrorCode_Revision, |
|
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1909 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
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1910 } |
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1911 else |
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1912 { |
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1913 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
|
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1914 } |
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1915 } |
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1916 |
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1917 if (found) |
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1918 { |
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1919 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1920 } |
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1921 else |
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1922 { |
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1923 throw OrthancException(ErrorCode_UnknownResource); |
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1924 } |
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1925 } |
|
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1926 else |
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1927 { |
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1928 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1929 } |
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1930 } |
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1931 |
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1932 |
| 974 | 1933 static void SetMetadata(RestApiPutCall& call) |
|
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1934 { |
| 4414 | 1935 if (call.IsDocumentation()) |
| 1936 { | |
| 1937 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1938 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1939 call.GetDocumentation() | |
| 1940 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1941 .SetSummary("Set metadata") | |
| 1942 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
| 1943 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
| 1944 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1945 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
|
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1946 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
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1947 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
| 4414 | 1948 return; |
| 1949 } | |
| 1950 | |
|
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1951 CheckValidResourceType(call); |
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1952 |
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1953 std::string publicId = call.GetUriComponent("id", ""); |
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1954 std::string name = call.GetUriComponent("name", ""); |
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|
1955 MetadataType metadata = StringToMetadata(name); |
|
1446
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diff
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|
1956 |
|
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|
1957 std::string value; |
|
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|
1958 call.BodyToString(value); |
|
751
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changeset
|
1959 |
|
1773
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1759
diff
changeset
|
1960 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
|
751
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|
1961 { |
|
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1962 int64_t oldRevision; |
|
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1963 std::string oldMD5; |
|
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1964 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
4623
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|
1965 |
|
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changeset
|
1966 if (!hasOldRevision) |
|
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diff
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|
1967 { |
|
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|
1968 OrthancConfiguration::ReaderLock lock; |
|
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|
1969 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
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|
1970 { |
|
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parents:
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diff
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|
1971 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
|
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changeset
|
1972 // the actual value of "oldRevision" if the metadata is |
|
95ffe3b6ef7c
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diff
changeset
|
1973 // inexistent as expected |
|
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changeset
|
1974 hasOldRevision = true; |
|
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diff
changeset
|
1975 oldRevision = -1; // dummy value |
|
4640
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|
1976 oldMD5.clear(); // dummy value |
|
4623
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parents:
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diff
changeset
|
1977 } |
|
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parents:
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|
1978 } |
|
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parents:
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diff
changeset
|
1979 |
|
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parents:
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diff
changeset
|
1980 int64_t newRevision; |
|
4640
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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parents:
4627
diff
changeset
|
1981 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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parents:
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diff
changeset
|
1982 hasOldRevision, oldRevision, oldMD5); |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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parents:
4627
diff
changeset
|
1983 |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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parents:
4627
diff
changeset
|
1984 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
1985 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1986 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
1987 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents:
2127
diff
changeset
|
1988 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents:
2127
diff
changeset
|
1989 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
1990 } |
|
751
5197fd35333c
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parents:
diff
changeset
|
1991 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1992 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1993 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1994 |
|
5221
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
1995 // Handling of labels ------------------------------------------------------- |
|
d0f7c742d397
started implementation of labels
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5200
diff
changeset
|
1996 |
|
d0f7c742d397
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parents:
5200
diff
changeset
|
1997 static void ListLabels(RestApiGetCall& call) |
|
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
1998 { |
|
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
1999 if (call.IsDocumentation()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2000 { |
|
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2001 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2002 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2003 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2004 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
5275
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
2005 .SetSummary("List labels") |
|
8686476e9d12
fix inclusion of winsock.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5274
diff
changeset
|
2006 .SetDescription("Get the labels that are associated with the given " + r + " (new in Orthanc 1.12.0)") |
|
5221
d0f7c742d397
started implementation of labels
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parents:
5200
diff
changeset
|
2007 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2008 .AddAnswerType(MimeType_Json, "JSON array containing the names of the labels") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2009 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/labels", true); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2010 return; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2011 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2012 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2013 assert(!call.GetFullUri().empty()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2014 const std::string publicId = call.GetUriComponent("id", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2015 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2016 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2017 std::set<std::string> labels; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2018 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2019 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2020 Json::Value result = Json::arrayValue; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2021 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2022 for (std::set<std::string>::const_iterator it = labels.begin(); it != labels.end(); ++it) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2023 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2024 result.append(*it); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2025 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2026 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2027 call.GetOutput().AnswerJson(result); |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2028 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2029 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2030 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2031 static void GetLabel(RestApiGetCall& call) |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2032 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2033 if (call.IsDocumentation()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2034 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2035 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2036 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2037 call.GetDocumentation() |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2038 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2039 .SetSummary("Test label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2040 .SetDescription("Test whether the " + r + " is associated with the given label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2041 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2042 .SetUriArgument("label", "The label of interest") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2043 .AddAnswerType(MimeType_PlainText, "Empty string is returned in the case of presence, error 404 in the case of absence"); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2044 return; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2045 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2046 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2047 CheckValidResourceType(call); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
2048 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2049 assert(!call.GetFullUri().empty()); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2050 const std::string publicId = call.GetUriComponent("id", ""); |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2051 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2052 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2053 std::string label = call.GetUriComponent("label", ""); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2054 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2055 std::set<std::string> labels; |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2056 OrthancRestApi::GetIndex(call).ListLabels(labels, publicId, level); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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5200
diff
changeset
|
2057 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2058 if (labels.find(label) != labels.end()) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2059 { |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2060 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2061 } |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2062 } |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2063 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2064 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2065 static void AddLabel(RestApiPutCall& call) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2066 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2067 if (call.IsDocumentation()) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2068 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2069 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2070 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2071 call.GetDocumentation() |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2072 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2073 .SetSummary("Add label") |
|
d0f7c742d397
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2074 .SetDescription("Associate a label with a " + r) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2075 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
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started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2076 .SetUriArgument("label", "The label to be added"); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2077 return; |
|
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diff
changeset
|
2078 } |
|
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changeset
|
2079 |
|
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changeset
|
2080 CheckValidResourceType(call); |
|
d0f7c742d397
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changeset
|
2081 |
|
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changeset
|
2082 std::string publicId = call.GetUriComponent("id", ""); |
|
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changeset
|
2083 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
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changeset
|
2084 |
|
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started implementation of labels
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changeset
|
2085 std::string label = call.GetUriComponent("label", ""); |
|
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changeset
|
2086 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Add); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
2087 |
|
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changeset
|
2088 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
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diff
changeset
|
2089 } |
|
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diff
changeset
|
2090 |
|
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changeset
|
2091 |
|
d0f7c742d397
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changeset
|
2092 static void RemoveLabel(RestApiDeleteCall& call) |
|
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changeset
|
2093 { |
|
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changeset
|
2094 if (call.IsDocumentation()) |
|
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diff
changeset
|
2095 { |
|
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changeset
|
2096 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
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changeset
|
2097 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
d0f7c742d397
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changeset
|
2098 call.GetDocumentation() |
|
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changeset
|
2099 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
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|
2100 .SetSummary("Remove label") |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2101 .SetDescription("Remove a label associated with a " + r) |
|
d0f7c742d397
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|
2102 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
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|
2103 .SetUriArgument("label", "The label to be removed"); |
|
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|
2104 return; |
|
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|
2105 } |
|
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|
2106 |
|
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changeset
|
2107 CheckValidResourceType(call); |
|
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|
2108 |
|
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changeset
|
2109 std::string publicId = call.GetUriComponent("id", ""); |
|
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changeset
|
2110 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
|
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changeset
|
2111 |
|
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changeset
|
2112 std::string label = call.GetUriComponent("label", ""); |
|
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changeset
|
2113 OrthancRestApi::GetIndex(call).ModifyLabel(publicId, level, label, StatelessDatabaseOperations::LabelOperation_Remove); |
|
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|
2114 |
|
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changeset
|
2115 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
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|
2116 } |
|
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changeset
|
2117 |
|
751
5197fd35333c
refactoring of OrthancRestApi
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|
2118 |
|
5197fd35333c
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changeset
|
2119 // Handling of attached files ----------------------------------------------- |
|
5197fd35333c
refactoring of OrthancRestApi
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diff
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|
2120 |
| 974 | 2121 static void ListAttachments(RestApiGetCall& call) |
|
751
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diff
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|
2122 { |
| 4409 | 2123 if (call.IsDocumentation()) |
| 2124 { | |
| 2125 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2126 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2127 call.GetDocumentation() | |
| 2128 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2129 .SetSummary("List attachments") | |
| 2130 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
| 2131 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
4853
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2132 .SetHttpGetArgument("full", RestApiCallDocumentation::Type_String, |
|
b3d0a3a4d890
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2133 "If present, retrieve the attachments list and their numerical ids", false) |
| 4409 | 2134 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") |
| 2135 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
| 2136 return; | |
| 2137 } | |
| 2138 | |
| 2139 const std::string resourceType = call.GetFullUri() [0]; | |
| 2140 const std::string publicId = call.GetUriComponent("id", ""); | |
|
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
2141 std::set<FileContentType> attachments; |
|
751
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
2142 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
|
5197fd35333c
refactoring of OrthancRestApi
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diff
changeset
|
2143 |
|
4853
b3d0a3a4d890
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Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2144 Json::Value result; |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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4836
diff
changeset
|
2145 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
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parents:
4836
diff
changeset
|
2146 if (call.HasArgument("full")) |
|
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2147 { |
|
4853
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
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|
2148 result = Json::objectValue; |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2149 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2150 for (std::set<FileContentType>::const_iterator |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2151 it = attachments.begin(); it != attachments.end(); ++it) |
|
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Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2152 { |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2153 std::string key = EnumerationToString(*it); |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
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diff
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|
2154 result[key] = static_cast<uint16_t>(*it); |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2155 } |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2156 } |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2157 else |
|
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Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2158 { |
|
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Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2159 result = Json::arrayValue; |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2160 |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
changeset
|
2161 for (std::set<FileContentType>::const_iterator |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2162 it = attachments.begin(); it != attachments.end(); ++it) |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2163 { |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2164 result.append(EnumerationToString(*it)); |
|
b3d0a3a4d890
Added links to download attachments from the Orthanc Explorer
Alain Mazy <am@osimis.io>
parents:
4836
diff
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|
2165 } |
|
751
5197fd35333c
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|
2166 } |
|
5197fd35333c
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parents:
diff
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|
2167 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2168 call.GetOutput().AnswerJson(result); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2169 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2170 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2171 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2172 static void AddAttachmentDocumentation(RestApiGetCall& call, |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2173 const std::string& resourceType) |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2174 { |
|
f7d5372b59b3
handling revisions of attachments
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|
2175 call.GetDocumentation() |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2176 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2177 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2178 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2179 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2180 } |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2181 |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2182 |
|
f7d5372b59b3
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4623
diff
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|
2183 static bool GetAttachmentInfo(FileInfo& info, |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2184 RestApiGetCall& call) |
|
751
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2185 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2186 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2187 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2188 const std::string publicId = call.GetUriComponent("id", ""); |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2189 const std::string name = call.GetUriComponent("name", ""); |
|
751
5197fd35333c
refactoring of OrthancRestApi
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|
2190 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2191 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2192 int64_t revision; |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2193 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2194 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2195 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
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|
2196 |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2197 int64_t userRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2198 std::string userMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2199 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2200 revision == userRevision && |
|
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
changeset
|
2201 info.GetUncompressedMD5() == userMD5) |
|
4627
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2202 { |
|
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4623
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|
2203 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2204 return false; |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2205 } |
|
f7d5372b59b3
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|
2206 else |
|
f7d5372b59b3
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parents:
4623
diff
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|
2207 { |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2208 return true; |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2209 } |
|
f7d5372b59b3
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4623
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|
2210 } |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2211 else |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2212 { |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2213 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
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parents:
4623
diff
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|
2214 } |
|
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5197fd35333c
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|
2215 } |
|
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parents:
diff
changeset
|
2216 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2217 |
| 974 | 2218 static void GetAttachmentOperations(RestApiGetCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2219 { |
| 4409 | 2220 if (call.IsDocumentation()) |
| 2221 { | |
| 2222 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2223 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2224 AddAttachmentDocumentation(call, r); |
| 4409 | 2225 call.GetDocumentation() |
| 2226 .SetTag("Other") | |
| 4414 | 2227 .SetSummary("List operations on attachments") |
| 2228 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
| 4409 | 2229 .AddAnswerType(MimeType_Json, "List of the available operations") |
| 2230 .SetHttpGetSample("https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2/attachments/dicom", true); | |
| 2231 return; | |
| 2232 } | |
| 2233 | |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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|
2234 FileInfo info; |
|
5197fd35333c
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|
2235 if (GetAttachmentInfo(info, call)) |
|
5197fd35333c
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|
2236 { |
|
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diff
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|
2237 Json::Value operations = Json::arrayValue; |
|
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parents:
diff
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|
2238 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
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|
2239 operations.append("compress"); |
|
751
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|
2240 operations.append("compressed-data"); |
|
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diff
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|
2241 |
|
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diff
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|
2242 if (info.GetCompressedMD5() != "") |
|
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|
2243 { |
|
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|
2244 operations.append("compressed-md5"); |
|
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|
2245 } |
|
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|
2246 |
|
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|
2247 operations.append("compressed-size"); |
|
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|
2248 operations.append("data"); |
|
4883
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parents:
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diff
changeset
|
2249 operations.append("info"); |
|
1700
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|
2250 operations.append("is-compressed"); |
|
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|
2251 |
|
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|
2252 if (info.GetUncompressedMD5() != "") |
|
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|
2253 { |
|
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|
2254 operations.append("md5"); |
|
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|
2255 } |
|
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|
2256 |
|
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|
2257 operations.append("size"); |
|
1700
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|
2258 operations.append("uncompress"); |
|
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|
2259 |
|
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|
2260 if (info.GetCompressedMD5() != "" && |
|
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|
2261 info.GetUncompressedMD5() != "") |
|
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|
2262 { |
|
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|
2263 operations.append("verify-md5"); |
|
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|
2264 } |
|
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|
2265 |
|
4883
504624b0a062
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Alain Mazy <am@osimis.io>
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changeset
|
2266 operations.append("uuid"); |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2267 |
|
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|
2268 call.GetOutput().AnswerJson(operations); |
|
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|
2269 } |
|
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|
2270 } |
|
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|
2271 |
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|
2272 |
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|
2273 template <int uncompress> |
| 974 | 2274 static void GetAttachmentData(RestApiGetCall& call) |
|
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|
2275 { |
| 4409 | 2276 if (call.IsDocumentation()) |
| 2277 { | |
| 2278 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2279 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2280 call.GetDocumentation() | |
| 2281 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2282 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
| 2283 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
| 4418 | 2284 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
| 4409 | 2285 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 2286 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
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2287 .AddAnswerType(MimeType_Binary, "The attachment") |
|
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2288 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
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2289 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4409 | 2290 return; |
| 2291 } | |
| 2292 | |
|
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2293 ServerContext& context = OrthancRestApi::GetContext(call); |
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2294 |
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2295 CheckValidResourceType(call); |
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2296 |
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2297 std::string publicId = call.GetUriComponent("id", ""); |
|
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2298 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
|
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2299 |
|
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2300 FileInfo info; |
|
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2301 if (GetAttachmentInfo(info, call)) |
|
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2302 { |
|
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2303 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
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2304 |
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2305 if (uncompress) |
|
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2306 { |
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2307 context.AnswerAttachment(call.GetOutput(), publicId, type); |
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2308 } |
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2309 else |
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2310 { |
|
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2311 // Return the raw data (possibly compressed), as stored on the filesystem |
|
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2312 std::string content; |
|
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|
2313 int64_t revision; |
|
5048
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Alain Mazy <am@osimis.io>
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5003
diff
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|
2314 context.ReadAttachment(content, revision, publicId, type, false, true /* skipCache when you absolutely need the compressed data */); |
|
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2315 |
|
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2316 int64_t userRevision; |
|
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2317 std::string userMD5; |
|
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2318 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
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2319 revision == userRevision && |
|
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2320 info.GetUncompressedMD5() == userMD5) |
|
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2321 { |
|
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2322 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
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2323 } |
|
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2324 else |
|
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2325 { |
|
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|
2326 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
|
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|
2327 } |
|
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2328 } |
|
1146
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|
2329 } |
|
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|
2330 } |
|
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|
2331 |
|
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|
2332 |
| 974 | 2333 static void GetAttachmentSize(RestApiGetCall& call) |
|
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|
2334 { |
| 4409 | 2335 if (call.IsDocumentation()) |
| 2336 { | |
| 2337 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2338 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
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4623
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|
2339 AddAttachmentDocumentation(call, r); |
| 4409 | 2340 call.GetDocumentation() |
| 2341 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2342 .SetSummary("Get size of attachment") | |
| 2343 .SetDescription("Get the size of one attachment associated with the given " + r) | |
| 2344 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
| 2345 return; | |
| 2346 } | |
| 2347 | |
|
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|
2348 FileInfo info; |
|
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|
2349 if (GetAttachmentInfo(info, call)) |
|
5197fd35333c
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|
2350 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
changeset
|
2351 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
|
751
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|
2352 } |
|
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|
2353 } |
|
5197fd35333c
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|
2354 |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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4880
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|
2355 static void GetAttachmentInfo(RestApiGetCall& call) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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diff
changeset
|
2356 { |
|
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Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2357 if (call.IsDocumentation()) |
|
504624b0a062
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|
2358 { |
|
504624b0a062
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|
2359 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
504624b0a062
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|
2360 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
504624b0a062
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diff
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|
2361 AddAttachmentDocumentation(call, r); |
|
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|
2362 call.GetDocumentation() |
|
504624b0a062
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|
2363 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2364 .SetSummary("Get info about the attachment") |
|
504624b0a062
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|
2365 .SetDescription("Get all the information about the attachment associated with the given " + r) |
|
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
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|
2366 .AddAnswerType(MimeType_Json, "JSON object containing the information about the attachment") |
| 5003 | 2367 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/attachments/dicom/info", true); |
|
4883
504624b0a062
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|
2368 return; |
|
504624b0a062
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2369 } |
|
504624b0a062
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|
2370 |
|
504624b0a062
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diff
changeset
|
2371 FileInfo info; |
|
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|
2372 if (GetAttachmentInfo(info, call)) |
|
504624b0a062
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|
2373 { |
|
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|
2374 Json::Value result = Json::objectValue; |
|
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|
2375 result["Uuid"] = info.GetUuid(); |
|
504624b0a062
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|
2376 result["ContentType"] = info.GetContentType(); |
|
504624b0a062
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|
2377 result["UncompressedSize"] = Json::Value::UInt64(info.GetUncompressedSize()); |
|
504624b0a062
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|
2378 result["CompressedSize"] = Json::Value::UInt64(info.GetCompressedSize()); |
|
504624b0a062
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|
2379 result["UncompressedMD5"] = info.GetUncompressedMD5(); |
|
504624b0a062
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|
2380 result["CompressedMD5"] = info.GetCompressedMD5(); |
|
504624b0a062
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|
2381 |
|
504624b0a062
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|
2382 call.GetOutput().AnswerJson(result); |
|
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|
2383 } |
|
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|
2384 } |
|
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|
2385 |
| 974 | 2386 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
|
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|
2387 { |
| 4409 | 2388 if (call.IsDocumentation()) |
| 2389 { | |
| 2390 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2391 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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4623
diff
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|
2392 AddAttachmentDocumentation(call, r); |
| 4409 | 2393 call.GetDocumentation() |
| 2394 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 4410 | 2395 .SetSummary("Get size of attachment on disk") |
| 4409 | 2396 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
| 4413 | 2397 "This is different from `.../size` iff `EnableStorage` is `true`.") |
| 4410 | 2398 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
| 4409 | 2399 return; |
| 2400 } | |
| 2401 | |
|
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|
2402 FileInfo info; |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2403 if (GetAttachmentInfo(info, call)) |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2404 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
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|
2405 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2406 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2407 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2408 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2409 |
| 974 | 2410 static void GetAttachmentMD5(RestApiGetCall& call) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2411 { |
| 4410 | 2412 if (call.IsDocumentation()) |
| 2413 { | |
| 2414 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2415 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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4623
diff
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|
2416 AddAttachmentDocumentation(call, r); |
| 4410 | 2417 call.GetDocumentation() |
| 2418 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2419 .SetSummary("Get MD5 of attachment") | |
| 2420 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
| 2421 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
| 2422 return; | |
| 2423 } | |
| 2424 | |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2425 FileInfo info; |
|
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diff
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|
2426 if (GetAttachmentInfo(info, call) && |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2427 info.GetUncompressedMD5() != "") |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2428 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
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|
2429 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2430 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2431 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2432 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2433 |
| 974 | 2434 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
|
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|
2435 { |
| 4410 | 2436 if (call.IsDocumentation()) |
| 2437 { | |
| 2438 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2439 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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4623
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|
2440 AddAttachmentDocumentation(call, r); |
| 4410 | 2441 call.GetDocumentation() |
| 2442 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2443 .SetSummary("Get MD5 of attachment on disk") | |
| 2444 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
| 4413 | 2445 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
| 4410 | 2446 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
| 2447 return; | |
| 2448 } | |
| 2449 | |
|
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|
2450 FileInfo info; |
|
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parents:
diff
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|
2451 if (GetAttachmentInfo(info, call) && |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2452 info.GetCompressedMD5() != "") |
|
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refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2453 { |
|
2908
9d277f8ad698
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
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|
2454 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2455 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2456 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2457 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2458 |
| 974 | 2459 static void VerifyAttachment(RestApiPostCall& call) |
|
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parents:
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|
2460 { |
| 4410 | 2461 if (call.IsDocumentation()) |
| 2462 { | |
| 2463 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2464 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2465 call.GetDocumentation() | |
| 2466 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2467 .SetSummary("Verify attachment") | |
| 2468 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
| 2469 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2470 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 2471 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
| 2472 return; | |
| 2473 } | |
| 2474 | |
|
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parents:
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|
2475 ServerContext& context = OrthancRestApi::GetContext(call); |
|
5197fd35333c
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diff
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|
2476 CheckValidResourceType(call); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2477 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2478 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2479 std::string name = call.GetUriComponent("name", ""); |
|
4627
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4623
diff
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|
2480 FileContentType contentType = StringToContentType(name); |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2481 |
|
5197fd35333c
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parents:
diff
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|
2482 FileInfo info; |
|
4627
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2483 int64_t revision; // Ignored |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
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|
2484 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2485 info.GetCompressedMD5() == "" || |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2486 info.GetUncompressedMD5() == "") |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2487 { |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2488 // Inexistent resource, or no MD5 available |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2489 return; |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2490 } |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2491 |
|
5197fd35333c
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diff
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|
2492 bool ok = false; |
|
5197fd35333c
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|
2493 |
|
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|
2494 // First check whether the compressed data is correctly stored in the disk |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2495 std::string data; |
|
5048
22966345eaba
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Alain Mazy <am@osimis.io>
parents:
5003
diff
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|
2496 context.ReadAttachment(data, revision, publicId, StringToContentType(name), false, true /* skipCache when you absolutely need the compressed data */); |
|
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|
2497 |
|
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parents:
diff
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|
2498 std::string actualMD5; |
|
5197fd35333c
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parents:
diff
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|
2499 Toolbox::ComputeMD5(actualMD5, data); |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2500 |
|
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diff
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|
2501 if (actualMD5 == info.GetCompressedMD5()) |
|
5197fd35333c
refactoring of OrthancRestApi
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parents:
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|
2502 { |
|
5197fd35333c
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parents:
diff
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|
2503 // The compressed data is OK. If a compression algorithm was |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2504 // applied to it, now check the MD5 of the uncompressed data. |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2505 if (info.GetCompressionType() == CompressionType_None) |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2506 { |
|
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diff
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|
2507 ok = true; |
|
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|
2508 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2509 else |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2510 { |
|
5048
22966345eaba
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Alain Mazy <am@osimis.io>
parents:
5003
diff
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|
2511 context.ReadAttachment(data, revision, publicId, StringToContentType(name), true, true /* skipCache when you absolutely need the compressed data */); |
|
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|
2512 Toolbox::ComputeMD5(actualMD5, data); |
|
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|
2513 ok = (actualMD5 == info.GetUncompressedMD5()); |
|
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|
2514 } |
|
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|
2515 } |
|
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|
2516 |
|
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|
2517 if (ok) |
|
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diff
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|
2518 { |
|
4294
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parents:
4272
diff
changeset
|
2519 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
|
2908
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|
2520 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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|
2521 } |
|
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|
2522 else |
|
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diff
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|
2523 { |
|
4294
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Alain Mazy <alain@mazy.be>
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4272
diff
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|
2524 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
|
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|
2525 } |
|
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|
2526 } |
|
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|
2527 |
|
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|
2528 |
| 974 | 2529 static void UploadAttachment(RestApiPutCall& call) |
|
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|
2530 { |
| 4414 | 2531 if (call.IsDocumentation()) |
| 2532 { | |
| 2533 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2534 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2535 call.GetDocumentation() | |
| 2536 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2537 .SetSummary("Set attachment") | |
| 2538 .SetDescription("Attach a file to the given DICOM " + r + | |
| 2539 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
| 2540 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 2541 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
| 2542 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
|
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4623
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|
2543 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
|
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4623
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|
2544 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
| 4414 | 2545 return; |
| 2546 } | |
| 2547 | |
|
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|
2548 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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|
2549 CheckValidResourceType(call); |
|
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|
2550 |
|
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|
2551 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2552 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2553 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2554 FileContentType contentType = StringToContentType(name); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2555 if (IsUserContentType(contentType)) // It is forbidden to modify internal attachments |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2556 { |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2557 int64_t oldRevision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2558 std::string oldMD5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2559 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2560 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2561 if (!hasOldRevision) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2562 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2563 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2564 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2565 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2566 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2567 // the actual value of "oldRevision" if the metadata is |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2568 // inexistent as expected |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2569 hasOldRevision = true; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2570 oldRevision = -1; // dummy value |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2571 oldMD5.clear(); // dummy value |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2572 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2573 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2574 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2575 int64_t newRevision; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2576 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2577 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2578 |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2579 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2580 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2581 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2582 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2583 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2584 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2585 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2586 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2587 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2588 |
| 974 | 2589 static void DeleteAttachment(RestApiDeleteCall& call) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2590 { |
| 4413 | 2591 if (call.IsDocumentation()) |
| 2592 { | |
| 2593 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2594 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2595 call.GetDocumentation() | |
| 2596 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2597 .SetSummary("Delete attachment") | |
| 4414 | 2598 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
| 2599 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
| 4413 | 2600 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2601 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2602 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2603 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4413 | 2604 return; |
| 2605 } | |
| 2606 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2607 CheckValidResourceType(call); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2608 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2609 std::string publicId = call.GetUriComponent("id", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2610 std::string name = call.GetUriComponent("name", ""); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2611 FileContentType contentType = StringToContentType(name); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2612 |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2613 bool allowed; |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2614 if (IsUserContentType(contentType)) |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2615 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2616 allowed = true; |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2617 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2618 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2619 { |
|
2940
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2620 OrthancConfiguration::ReaderLock lock; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2621 |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2622 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2623 contentType == FileContentType_DicomAsJson) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2624 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2625 allowed = true; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2626 } |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2627 else |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2628 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2629 // It is forbidden to delete internal attachments, except for |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2630 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2631 // would be automatically reconstructed on the next GET call) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2632 allowed = false; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2633 } |
|
2128
9329ba17a069
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2634 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2635 |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2636 if (allowed) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2637 { |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2638 bool found; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2639 int64_t revision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2640 std::string md5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2641 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2642 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2643 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2644 } |
|
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2645 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2646 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2647 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2648 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2649 { |
|
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2650 throw OrthancException(ErrorCode_Revision, |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2651 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
4627
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2652 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2653 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2654 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2655 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2656 false, -1 /* dummy value */, "" /* dummy value */); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2657 } |
|
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2658 } |
|
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2659 |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2660 if (found) |
|
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2661 { |
|
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2662 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2663 } |
|
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2664 else |
|
f7d5372b59b3
handling revisions of attachments
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parents:
4623
diff
changeset
|
2665 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2666 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2667 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
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parents:
diff
changeset
|
2668 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2669 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2670 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2671 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2672 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2673 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2674 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2675 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2676 template <enum CompressionType compression> |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2677 static void ChangeAttachmentCompression(RestApiPostCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2678 { |
| 4413 | 2679 if (call.IsDocumentation()) |
| 2680 { | |
| 2681 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2682 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2683 call.GetDocumentation() | |
| 2684 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2685 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
| 2686 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
| 2687 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2688 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
| 4413 | 2689 return; |
| 2690 } | |
| 2691 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2692 CheckValidResourceType(call); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2693 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2694 std::string publicId = call.GetUriComponent("id", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2695 std::string name = call.GetUriComponent("name", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2696 FileContentType contentType = StringToContentType(name); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2697 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2698 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2699 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2700 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2701 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2702 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2703 static void IsAttachmentCompressed(RestApiGetCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2704 { |
| 4413 | 2705 if (call.IsDocumentation()) |
| 2706 { | |
| 2707 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2708 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2709 AddAttachmentDocumentation(call, r); |
| 4413 | 2710 call.GetDocumentation() |
| 2711 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2712 .SetSummary("Is attachment compressed?") | |
| 2713 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
| 2714 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
| 2715 return; | |
| 2716 } | |
| 2717 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2718 FileInfo info; |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2719 if (GetAttachmentInfo(info, call)) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2720 { |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2721 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2722 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2723 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2724 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2725 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2726 |
| 782 | 2727 // Raw access to the DICOM tags of an instance ------------------------------ |
| 2728 | |
| 974 | 2729 static void GetRawContent(RestApiGetCall& call) |
| 782 | 2730 { |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2731 if (call.IsDocumentation()) |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2732 { |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2733 call.GetDocumentation() |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2734 .SetTag("Instances") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2735 .SetSummary("Get raw tag") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2736 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2737 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
5393
c5c00bee291a
in openapi generator: renamed '...' into 'path' since '...' is an invalid name
Alain Mazy <am@osimis.io>
parents:
5392
diff
changeset
|
2738 .SetUriArgument("path", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2739 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2740 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2741 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2742 "or JSON array containing the list of available tags if accessing a dataset"); |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2743 return; |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2744 } |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2745 |
| 782 | 2746 std::string id = call.GetUriComponent("id", ""); |
| 2747 | |
| 2748 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
| 2749 | |
| 2750 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
| 2751 } | |
| 2752 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2753 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2754 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2755 static bool ExtractSharedTags(Json::Value& shared, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2756 ServerContext& context, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2757 const std::string& publicId) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2758 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2759 // Retrieve all the instances of this patient/study/series |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2760 typedef std::list<std::string> Instances; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2761 Instances instances; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2762 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2763 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2764 // Loop over the instances |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2765 bool isFirst = true; |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2766 shared = Json::objectValue; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2767 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2768 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2769 it != instances.end(); ++it) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2770 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2771 // Get the tags of the current instance, in the simplified format |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2772 Json::Value tags; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2773 |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2774 try |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2775 { |
| 2124 | 2776 context.ReadDicomAsJson(tags, *it); |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2777 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2778 catch (OrthancException&) |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2779 { |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2780 // Race condition: This instance has been removed since |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2781 // (*). Ignore this instance. |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2782 continue; |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2783 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2784 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2785 if (tags.type() != Json::objectValue) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2786 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2787 return false; // Error |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2788 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2789 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2790 // Only keep the tags that are mapped to a string |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2791 Json::Value::Members members = tags.getMemberNames(); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2792 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2793 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2794 const Json::Value& tag = tags[members[i]]; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2795 if (tag.type() != Json::objectValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2796 tag["Type"].type() != Json::stringValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2797 tag["Type"].asString() != "String") |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2798 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2799 tags.removeMember(members[i]); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2800 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2801 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2802 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2803 if (isFirst) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2804 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2805 // This is the first instance, keep its tags as such |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2806 shared = tags; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2807 isFirst = false; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2808 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2809 else |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2810 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2811 // Loop over all the members of the shared tags extracted so |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2812 // far. If the value of one of these tags does not match its |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2813 // value in the current instance, remove it. |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2814 members = shared.getMemberNames(); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2815 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2816 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2817 if (!tags.isMember(members[i]) || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2818 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2819 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2820 shared.removeMember(members[i]); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2821 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2822 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2823 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2824 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2825 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2826 return true; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2827 } |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2828 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2829 |
| 974 | 2830 static void GetSharedTags(RestApiGetCall& call) |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2831 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2832 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2833 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2834 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2835 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2836 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2837 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2838 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2839 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2840 .SetSummary("Get shared tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2841 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2842 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2843 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2844 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2845 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2846 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2847 } |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2848 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2849 ServerContext& context = OrthancRestApi::GetContext(call); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2850 std::string publicId = call.GetUriComponent("id", ""); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2851 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2852 Json::Value sharedTags; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2853 if (ExtractSharedTags(sharedTags, context, publicId)) |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2854 { |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2855 // Success: Send the value of the shared tags |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2856 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2857 } |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2858 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2859 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2860 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2861 template <enum ResourceType resourceType, |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2862 enum DicomModule module> |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2863 static void GetModule(RestApiGetCall& call) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2864 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2865 if (call.IsDocumentation()) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2866 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2867 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2868 std::string m; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2869 switch (module) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2870 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2871 case DicomModule_Patient: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2872 m = "patient"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2873 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2874 case DicomModule_Study: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2875 m = "study"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2876 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2877 case DicomModule_Series: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2878 m = "series"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2879 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2880 case DicomModule_Instance: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2881 m = "instance"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2882 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2883 default: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2884 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2885 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2886 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2887 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2888 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2889 call.GetDocumentation() |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2890 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2891 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2892 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2893 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2894 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2895 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2896 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2897 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2898 return; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2899 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2900 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2901 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2902 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2903 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2904 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2905 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2906 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
|
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2907 { |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2908 throw OrthancException(ErrorCode_NotImplemented); |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2909 } |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2910 |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2911 ServerContext& context = OrthancRestApi::GetContext(call); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2912 std::string publicId = call.GetUriComponent("id", ""); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2913 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2914 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2915 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2916 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2917 typedef std::set<DicomTag> ModuleTags; |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2918 ModuleTags moduleTags; |
| 1368 | 2919 DicomTag::AddTagsForModule(moduleTags, module); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2920 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2921 Json::Value tags; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2922 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2923 if (resourceType != ResourceType_Instance) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2924 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2925 // Retrieve all the instances of this patient/study/series |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2926 typedef std::list<std::string> Instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2927 Instances instances; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2928 context.GetIndex().GetChildInstances(instances, publicId); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2929 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2930 if (instances.empty()) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2931 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2932 return; // Error: No instance (should never happen) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2933 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2934 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2935 // Select one child instance |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2936 publicId = instances.front(); |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2937 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2938 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2939 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2940 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2941 // Filter the tags of the instance according to the module |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2942 Json::Value result = Json::objectValue; |
| 1303 | 2943 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2944 { |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2945 std::string s = tag->Format(); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2946 if (tags.isMember(s)) |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2947 { |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2948 result[s] = tags[s]; |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2949 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2950 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2951 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2952 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2953 } |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2954 |
|
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2955 |
| 1722 | 2956 namespace |
| 2957 { | |
| 2958 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
| 2959 } | |
| 2960 | |
| 2961 | |
| 2962 static void AccumulateLookupResults(LookupResults& result, | |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2963 ServerIndex& index, |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2964 const DicomTag& tag, |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2965 const std::string& value, |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2966 ResourceType level) |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2967 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2968 std::vector<std::string> tmp; |
|
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1727
diff
changeset
|
2969 index.LookupIdentifierExact(tmp, level, tag, value); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2970 |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2971 for (size_t i = 0; i < tmp.size(); i++) |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2972 { |
|
3034
54e422fe31ce
moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3033
diff
changeset
|
2973 result.push_back(std::make_pair(level, tmp[i])); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2974 } |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2975 } |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2976 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2977 |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2978 static void Lookup(RestApiPostCall& call) |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2979 { |
| 4422 | 2980 if (call.IsDocumentation()) |
| 2981 { | |
| 2982 call.GetDocumentation() | |
| 2983 .SetTag("System") | |
| 2984 .SetSummary("Look for DICOM identifiers") | |
| 2985 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
| 2986 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
| 2987 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
| 2988 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
| 2989 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
| 2990 "DICOM resource that is stored by Orthanc"); | |
| 2991 return; | |
| 2992 } | |
| 2993 | |
|
1446
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
2994 std::string tag; |
|
8dc80ba768aa
refactoring: IHttpHandler does not use std::string to hold the request body
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1437
diff
changeset
|
2995 call.BodyToString(tag); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
2996 |
| 1722 | 2997 LookupResults resources; |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
2998 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2999 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3000 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3001 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
3002 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3003 |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3004 Json::Value result = Json::arrayValue; |
| 1722 | 3005 for (LookupResults::const_iterator |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1703
diff
changeset
|
3006 it = resources.begin(); it != resources.end(); ++it) |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3007 { |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3008 ResourceType type = it->first; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3009 const std::string& id = it->second; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3010 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3011 Json::Value item = Json::objectValue; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3012 item["Type"] = EnumerationToString(type); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3013 item["ID"] = id; |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3014 item["Path"] = GetBasePath(type, id); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3015 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3016 result.append(item); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3017 } |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3018 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3019 call.GetOutput().AnswerJson(result); |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3020 } |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3021 |
|
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3022 |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3023 namespace |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3024 { |
|
3021
2cbafb5d5a62
renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
3025 class FindVisitor : public ServerContext::ILookupVisitor |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3026 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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|
3027 private: |
|
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refactoring /tools/find using LookupResource::IVisitor
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changeset
|
3028 bool isComplete_; |
|
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refactoring /tools/find using LookupResource::IVisitor
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|
3029 std::list<std::string> resources_; |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3030 FindStorageAccessMode findStorageAccessMode_; |
|
4937
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include requested tags from storage if needed
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diff
changeset
|
3031 |
|
3f9b9865c8cc
include requested tags from storage if needed
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diff
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|
3032 // cache the data we used during lookup and that we could reuse when building the answers |
|
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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|
3033 std::map<std::string, std::string> instancesIds_; // the id of an instance for each found resource. |
|
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include requested tags from storage if needed
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3034 std::map<std::string, boost::shared_ptr<DicomMap> > resourcesMainDicomTags_; // all tags read from DB for a resource (current level and upper levels) |
|
5060
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
5058
diff
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|
3035 std::map<std::string, boost::shared_ptr<Json::Value> > resourcesDicomAsJson_; // the dicom-as-json for a resource |
|
4937
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include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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diff
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|
3036 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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4694
diff
changeset
|
3037 DicomToJsonFormat format_; |
|
3001
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|
3038 |
|
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refactoring /tools/find using LookupResource::IVisitor
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diff
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|
3039 public: |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3040 explicit FindVisitor(DicomToJsonFormat format, FindStorageAccessMode findStorageAccessMode) : |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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diff
changeset
|
3041 isComplete_(false), |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
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diff
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|
3042 findStorageAccessMode_(findStorageAccessMode), |
|
4697
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|
3043 format_(format) |
|
3001
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|
3044 { |
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|
3045 } |
| 4205 | 3046 |
| 3047 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
|
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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parents:
3003
diff
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|
3048 { |
|
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3049 return false; // (*) |
|
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
3050 } |
|
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
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3003
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|
3051 |
| 4205 | 3052 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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|
3053 { |
|
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|
3054 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
|
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refactoring /tools/find using LookupResource::IVisitor
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|
3055 } |
|
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|
3056 |
|
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|
3057 virtual void Visit(const std::string& publicId, |
|
4937
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include requested tags from storage if needed
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|
3058 const std::string& instanceId, |
|
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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|
3059 const DicomMap& mainDicomTags, |
|
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|
3060 const Json::Value* dicomAsJson) ORTHANC_OVERRIDE |
|
3001
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|
3061 { |
|
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|
3062 resources_.push_back(publicId); |
|
4937
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|
3063 instancesIds_[publicId] = instanceId; |
|
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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|
3064 resourcesMainDicomTags_[publicId].reset(mainDicomTags.Clone()); |
|
5060
e69a3ff39bc5
fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
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|
3065 if (dicomAsJson != NULL) |
|
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fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
parents:
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|
3066 { |
|
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fix reuse of DicomAsJson between lookup and answers
Alain Mazy <am@osimis.io>
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diff
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|
3067 resourcesDicomAsJson_[publicId].reset(new Json::Value(*dicomAsJson)); // keep our own copy because we might reuse it between lookup and answers |
|
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Alain Mazy <am@osimis.io>
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|
3068 } |
|
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Alain Mazy <am@osimis.io>
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|
3069 else |
|
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Alain Mazy <am@osimis.io>
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diff
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|
3070 { |
|
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Alain Mazy <am@osimis.io>
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|
3071 resourcesDicomAsJson_[publicId] = boost::shared_ptr<Json::Value>(); |
|
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fix reuse of DicomAsJson between lookup and answers
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|
3072 } |
|
3001
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|
3073 } |
|
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|
3074 |
|
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|
3075 void Answer(RestApiOutput& output, |
|
4935
acd3f72e2a21
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Alain Mazy <am@osimis.io>
parents:
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|
3076 ServerContext& context, |
|
3001
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|
3077 ResourceType level, |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3078 bool expand, |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
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|
3079 const std::set<DicomTag>& requestedTags) const |
|
3001
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|
3080 { |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3081 AnswerListOfResources(output, context, resources_, instancesIds_, resourcesMainDicomTags_, resourcesDicomAsJson_, level, expand, format_, requestedTags, IsStorageAccessAllowedForAnswers(findStorageAccessMode_)); |
|
3001
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3082 } |
|
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|
3083 }; |
|
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|
3084 } |
|
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|
3085 |
|
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|
3086 |
| 1354 | 3087 static void Find(RestApiPostCall& call) |
| 3088 { | |
| 2998 | 3089 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
| 3090 static const char* const KEY_EXPAND = "Expand"; | |
| 3091 static const char* const KEY_LEVEL = "Level"; | |
| 3092 static const char* const KEY_LIMIT = "Limit"; | |
| 3093 static const char* const KEY_QUERY = "Query"; | |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3094 static const char* const KEY_REQUESTED_TAGS = "RequestedTags"; |
| 2998 | 3095 static const char* const KEY_SINCE = "Since"; |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
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5227
diff
changeset
|
3096 static const char* const KEY_LABELS = "Labels"; // New in Orthanc 1.12.0 |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3097 static const char* const KEY_LABELS_CONSTRAINT = "LabelsConstraint"; // New in Orthanc 1.12.0 |
| 2998 | 3098 |
| 4421 | 3099 if (call.IsDocumentation()) |
| 3100 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3101 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3102 |
| 4421 | 3103 call.GetDocumentation() |
| 3104 .SetTag("System") | |
| 3105 .SetSummary("Look for local resources") | |
| 3106 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
| 3107 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
| 3108 "https://book.orthanc-server.com/users/rest.html#performing-finds-within-orthanc") | |
| 3109 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, | |
| 3110 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
| 3111 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
| 3112 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
| 3113 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
| 3114 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
| 3115 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
| 3116 "Limit the number of reported resources", false) | |
| 3117 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
| 3118 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
|
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3119 .SetRequestField(KEY_REQUESTED_TAGS, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3120 "A list of DICOM tags to include in the response (applicable only if \"Expand\" is set to true). " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
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diff
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|
3121 "The tags requested tags are returned in the 'RequestedTags' field in the response. " |
|
acd3f72e2a21
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parents:
4902
diff
changeset
|
3122 "Note that, if you are requesting tags that are not listed in the Main Dicom Tags stored in DB, building the response " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3123 "might be slow since Orthanc will need to access the DICOM files. If not specified, Orthanc will return " |
|
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4902
diff
changeset
|
3124 "all Main Dicom Tags to keep backward compatibility with Orthanc prior to 1.11.0.", false) |
| 4421 | 3125 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, |
| 3126 "Associative array containing the filter on the values of the DICOM tags", true) | |
|
5248
a7d95f951f8a
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Sebastien Jodogne <s.jodogne@gmail.com>
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5227
diff
changeset
|
3127 .SetRequestField(KEY_LABELS, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
a7d95f951f8a
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5227
diff
changeset
|
3128 "List of strings specifying which labels to look for in the resources (new in Orthanc 1.12.0)", true) |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
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5227
diff
changeset
|
3129 .SetRequestField(KEY_LABELS_CONSTRAINT, RestApiCallDocumentation::Type_String, |
|
a7d95f951f8a
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3130 "Constraint on the labels, can be `All`, `Any`, or `None` (defaults to `All`, new in Orthanc 1.12.0)", true) |
| 4421 | 3131 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 3132 "about the reported resources (if `Expand` argument is `true`)"); | |
| 3133 return; | |
| 3134 } | |
| 3135 | |
| 1358 | 3136 ServerContext& context = OrthancRestApi::GetContext(call); |
| 1354 | 3137 |
| 3138 Json::Value request; | |
|
3001
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|
3139 if (!call.ParseJsonRequest(request) || |
|
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|
3140 request.type() != Json::objectValue) |
|
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|
3141 { |
|
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|
3142 throw OrthancException(ErrorCode_BadRequest, |
|
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|
3143 "The body must contain a JSON object"); |
|
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|
3144 } |
|
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|
3145 else if (!request.isMember(KEY_LEVEL) || |
|
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|
3146 request[KEY_LEVEL].type() != Json::stringValue) |
|
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|
3147 { |
|
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diff
changeset
|
3148 throw OrthancException(ErrorCode_BadRequest, |
|
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changeset
|
3149 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
|
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diff
changeset
|
3150 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3151 else if (!request.isMember(KEY_QUERY) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3152 request[KEY_QUERY].type() != Json::objectValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3153 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3154 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3155 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3156 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3157 else if (request.isMember(KEY_CASE_SENSITIVE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3158 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3159 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3160 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3161 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" must be a Boolean"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3162 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3163 else if (request.isMember(KEY_LIMIT) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3164 request[KEY_LIMIT].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3165 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3166 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3167 "Field \"" + std::string(KEY_LIMIT) + "\" must be an integer"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3168 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3169 else if (request.isMember(KEY_SINCE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3170 request[KEY_SINCE].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3171 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3172 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3173 "Field \"" + std::string(KEY_SINCE) + "\" must be an integer"); |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3174 } |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3175 else if (request.isMember(KEY_REQUESTED_TAGS) && |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3176 request[KEY_REQUESTED_TAGS].type() != Json::arrayValue) |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3177 { |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3178 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3179 "Field \"" + std::string(KEY_REQUESTED_TAGS) + "\" must be an array"); |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3180 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3181 else if (request.isMember(KEY_LABELS) && |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3182 request[KEY_LABELS].type() != Json::arrayValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3183 { |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3184 throw OrthancException(ErrorCode_BadRequest, |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3185 "Field \"" + std::string(KEY_LABELS) + "\" must be an array of strings"); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3186 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3187 else if (request.isMember(KEY_LABELS_CONSTRAINT) && |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3188 request[KEY_LABELS_CONSTRAINT].type() != Json::stringValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3189 { |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3190 throw OrthancException(ErrorCode_BadRequest, |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3191 "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be an array of strings"); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3192 } |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3193 else |
| 1354 | 3194 { |
| 3195 bool expand = false; | |
| 2998 | 3196 if (request.isMember(KEY_EXPAND)) |
| 1354 | 3197 { |
| 2998 | 3198 expand = request[KEY_EXPAND].asBool(); |
| 1354 | 3199 } |
| 3200 | |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3201 bool caseSensitive = false; |
| 2998 | 3202 if (request.isMember(KEY_CASE_SENSITIVE)) |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3203 { |
| 2998 | 3204 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3205 } |
|
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
3206 |
| 1758 | 3207 size_t limit = 0; |
| 2998 | 3208 if (request.isMember(KEY_LIMIT)) |
| 1758 | 3209 { |
| 2998 | 3210 int tmp = request[KEY_LIMIT].asInt(); |
| 1847 | 3211 if (tmp < 0) |
| 1758 | 3212 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3213 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3214 "Field \"" + std::string(KEY_LIMIT) + "\" must be a positive integer"); |
| 1758 | 3215 } |
| 1847 | 3216 |
| 3217 limit = static_cast<size_t>(tmp); | |
| 1758 | 3218 } |
| 3219 | |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3220 size_t since = 0; |
| 2998 | 3221 if (request.isMember(KEY_SINCE)) |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3222 { |
| 2998 | 3223 int tmp = request[KEY_SINCE].asInt(); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3224 if (tmp < 0) |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3225 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3226 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3227 "Field \"" + std::string(KEY_SINCE) + "\" must be a positive integer"); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3228 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3229 |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3230 since = static_cast<size_t>(tmp); |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3231 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
3232 |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3233 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3234 |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3235 if (request.isMember(KEY_REQUESTED_TAGS)) |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3236 { |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3237 FromDcmtkBridge::ParseListOfTags(requestedTags, request[KEY_REQUESTED_TAGS]); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3238 } |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3239 |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3240 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
| 1360 | 3241 |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3242 DatabaseLookup query; |
| 1358 | 3243 |
| 2998 | 3244 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
| 1354 | 3245 for (size_t i = 0; i < members.size(); i++) |
| 3246 { | |
| 2998 | 3247 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
| 1354 | 3248 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
3249 throw OrthancException(ErrorCode_BadRequest, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3250 "Tag \"" + members[i] + "\" must be associated with a string"); |
| 1354 | 3251 } |
| 3252 | |
|
3163
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3253 const std::string value = request[KEY_QUERY][members[i]].asString(); |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3254 |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3255 if (!value.empty()) |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3256 { |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3257 // An empty string corresponds to an universal constraint, |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3258 // so we ignore it. This mimics the behavior of class |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3259 // "OrthancFindRequestHandler" |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3260 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3261 value, caseSensitive, true); |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
3262 } |
|
1361
94ffb597d297
refactoring of C-Find SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1360
diff
changeset
|
3263 } |
| 2876 | 3264 |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3265 if (request.isMember(KEY_LABELS)) // New in Orthanc 1.12.0 |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3266 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3267 for (Json::Value::ArrayIndex i = 0; i < request[KEY_LABELS].size(); i++) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3268 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3269 if (request[KEY_LABELS][i].type() != Json::stringValue) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3270 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3271 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS) + "\" must contain strings"); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3272 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3273 else |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3274 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3275 query.AddLabel(request[KEY_LABELS][i].asString()); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3276 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3277 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3278 } |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3279 |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3280 query.SetLabelsConstraint(LabelsConstraint_All); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3281 |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3282 if (request.isMember(KEY_LABELS_CONSTRAINT)) |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3283 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3284 const std::string& s = request[KEY_LABELS_CONSTRAINT].asString(); |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3285 if (s == "All") |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3286 { |
|
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3287 query.SetLabelsConstraint(LabelsConstraint_All); |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3288 } |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3289 else if (s == "Any") |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3290 { |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3291 query.SetLabelsConstraint(LabelsConstraint_Any); |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3292 } |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3293 else if (s == "None") |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3294 { |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3295 query.SetLabelsConstraint(LabelsConstraint_None); |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3296 } |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3297 else |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3298 { |
|
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5227
diff
changeset
|
3299 throw OrthancException(ErrorCode_BadRequest, "Field \"" + std::string(KEY_LABELS_CONSTRAINT) + "\" must be \"All\", \"Any\", or \"None\""); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3300 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3301 } |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
3302 |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3303 FindVisitor visitor(OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human), context.GetFindStorageAccessMode()); |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
3304 context.Apply(visitor, query, level, since, limit); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3305 visitor.Answer(call.GetOutput(), context, level, expand, requestedTags); |
| 1354 | 3306 } |
| 3307 } | |
| 3308 | |
| 3309 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3310 template <enum ResourceType start, |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3311 enum ResourceType end> |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3312 static void GetChildResources(RestApiGetCall& call) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3313 { |
| 4415 | 3314 if (call.IsDocumentation()) |
| 3315 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3316 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3317 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3318 |
| 4415 | 3319 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
| 3320 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3321 call.GetDocumentation() | |
| 3322 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3323 .SetSummary("Get child " + children) | |
| 3324 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3325 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3326 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3327 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
|
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3328 "If false or missing, only retrieve the list of child " + children, false) |
| 4415 | 3329 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) |
| 3330 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
| 3331 return; | |
| 3332 } | |
| 3333 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3334 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3335 ServerContext& context = OrthancRestApi::GetContext(call); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3336 |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3337 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3338 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3339 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3340 std::list<std::string> a, b, c; |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3341 a.push_back(call.GetUriComponent("id", "")); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3342 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3343 ResourceType type = start; |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3344 while (type != end) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3345 { |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3346 b.clear(); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3347 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3348 for (std::list<std::string>::const_iterator |
| 1303 | 3349 it = a.begin(); it != a.end(); ++it) |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3350 { |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3351 index.GetChildren(c, *it); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3352 b.splice(b.begin(), c); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3353 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3354 |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3355 type = GetChildResourceType(type); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3356 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3357 a.clear(); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3358 a.splice(a.begin(), b); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3359 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3360 |
|
5405
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3361 AnswerListOfResources(call.GetOutput(), context, a, type, !call.HasArgument("expand") || call.GetBooleanArgument("expand", false), // this "expand" is the only one to have a false default value to keep backward compatibility |
|
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3362 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human), |
|
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3363 requestedTags, |
|
62bb63346185
All 'expand' GET arguments now accepts expand=true and expand=false values + /studies/../instances now supports expand=false
Alain Mazy <am@osimis.io>
parents:
5393
diff
changeset
|
3364 true /* allowStorageAccess */); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3365 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3366 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3367 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3368 static void GetChildInstancesTags(RestApiGetCall& call) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3369 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3370 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3371 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3372 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3373 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3374 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3375 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3376 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3377 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3378 .SetSummary("Get tags of instances") |
|
0b27841950d5
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parents:
4415
diff
changeset
|
3379 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
|
0b27841950d5
openapi about creation of zip/media archives
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parents:
4415
diff
changeset
|
3380 " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
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parents:
4415
diff
changeset
|
3381 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3382 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3383 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3384 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3385 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3386 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3387 } |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3388 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3389 ServerContext& context = OrthancRestApi::GetContext(call); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3390 std::string publicId = call.GetUriComponent("id", ""); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3391 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
|
1166
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
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|
3392 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3393 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3394 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3395 |
|
1166
a921e3b5e763
bulk tags retrieval
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parents:
1146
diff
changeset
|
3396 // Retrieve all the instances of this patient/study/series |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
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|
3397 typedef std::list<std::string> Instances; |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
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|
3398 Instances instances; |
|
a921e3b5e763
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parents:
1146
diff
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|
3399 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3400 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
a921e3b5e763
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parents:
1146
diff
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|
3401 |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3402 Json::Value result = Json::objectValue; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
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|
3403 |
|
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3404 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 3405 it != instances.end(); ++it) |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
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|
3406 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3407 Json::Value full; |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3408 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3409 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3410 if (format != DicomToJsonFormat_Full) |
|
1166
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
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|
3411 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3412 Json::Value simplified; |
|
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
3413 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3414 result[*it] = simplified; |
|
1166
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3415 } |
|
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3416 else |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3417 { |
|
1201
09aa7c126be9
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3418 result[*it] = full; |
|
1166
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bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
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|
3419 } |
|
a921e3b5e763
bulk tags retrieval
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parents:
1146
diff
changeset
|
3420 } |
|
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3421 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3422 call.GetOutput().AnswerJson(result); |
|
a921e3b5e763
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diff
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|
3423 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3424 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3425 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3426 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3427 template <enum ResourceType start, |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3428 enum ResourceType end> |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3429 static void GetParentResource(RestApiGetCall& call) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
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|
3430 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3431 assert(start > end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3432 |
| 4415 | 3433 if (call.IsDocumentation()) |
| 3434 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3435 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3436 OrthancRestApi::DocumentRequestedTags(call); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3437 |
| 4415 | 3438 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
| 3439 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3440 call.GetDocumentation() | |
| 3441 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3442 .SetSummary("Get parent " + parent) | |
| 3443 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
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4415
diff
changeset
|
3444 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3445 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 3446 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
| 3447 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
| 3448 return; | |
| 3449 } | |
| 3450 | |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3451 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3452 |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3453 std::set<DicomTag> requestedTags; |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3454 OrthancRestApi::GetRequestedTags(requestedTags, call); |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3455 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3456 std::string current = call.GetUriComponent("id", ""); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3457 ResourceType currentType = start; |
|
8dac11c78d71
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3458 while (currentType > end) |
|
8dac11c78d71
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3459 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3460 std::string parent; |
|
8dac11c78d71
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3461 if (!index.LookupParent(parent, current)) |
|
8dac11c78d71
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3462 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3463 // Error that could happen if the resource gets deleted by |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3464 // another concurrent call |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3465 return; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3466 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3467 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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parents:
1276
diff
changeset
|
3468 current = parent; |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
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1509
diff
changeset
|
3469 currentType = GetParentResourceType(currentType); |
|
1281
8dac11c78d71
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diff
changeset
|
3470 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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diff
changeset
|
3471 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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diff
changeset
|
3472 assert(currentType == end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3473 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3474 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3475 |
| 4554 | 3476 Json::Value resource; |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3477 if (OrthancRestApi::GetContext(call).ExpandResource(resource, current, end, format, requestedTags, true /* allowStorageAccess */)) |
|
1281
8dac11c78d71
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1276
diff
changeset
|
3478 { |
| 4554 | 3479 call.GetOutput().AnswerJson(resource); |
|
1281
8dac11c78d71
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diff
changeset
|
3480 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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diff
changeset
|
3481 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3482 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
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diff
changeset
|
3483 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3484 static void ExtractPdf(RestApiGetCall& call) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3485 { |
| 4407 | 3486 if (call.IsDocumentation()) |
| 3487 { | |
| 3488 call.GetDocumentation() | |
| 3489 .SetTag("Instances") | |
| 3490 .SetSummary("Get embedded PDF") | |
| 3491 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
| 3492 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
| 3493 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
| 3494 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
| 3495 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
| 3496 return; | |
| 3497 } | |
| 3498 | |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3499 const std::string id = call.GetUriComponent("id", ""); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3500 std::string pdf; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3501 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3502 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3503 if (locker.GetDicom().ExtractPdf(pdf)) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3504 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3505 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3506 return; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3507 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3508 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3509 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3510 |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3511 static void OrderSlices(RestApiGetCall& call) |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3512 { |
| 4421 | 3513 if (call.IsDocumentation()) |
| 3514 { | |
| 3515 call.GetDocumentation() | |
| 3516 .SetDeprecated() | |
| 3517 .SetTag("Series") | |
| 3518 .SetSummary("Order the slices") | |
| 3519 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
| 3520 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
| 3521 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
| 3522 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3523 "Ordered list of paths to DICOM instances") | |
| 3524 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3525 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
| 3526 "in the case of multiframe images.") | |
| 3527 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
| 3528 "Same information as the `Slices` field, but in a compact form") | |
| 3529 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
| 3530 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
| 3531 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); | |
| 3532 return; | |
| 3533 } | |
| 3534 | |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3535 const std::string id = call.GetUriComponent("id", ""); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3536 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3537 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3538 SliceOrdering ordering(index, id); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3539 |
|
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3540 Json::Value result; |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3541 ordering.Format(result); |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3542 call.GetOutput().AnswerJson(result); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3543 } |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3544 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3545 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3546 static void GetInstanceHeader(RestApiGetCall& call) |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3547 { |
| 4404 | 3548 if (call.IsDocumentation()) |
| 3549 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3550 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 3551 call.GetDocumentation() |
| 3552 .SetTag("Instances") | |
| 3553 .SetSummary("Get DICOM meta-header") | |
| 3554 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
| 3555 "combines hexadecimal tags with human-readable description.") | |
| 3556 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 3557 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
| 3558 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); | |
| 3559 return; | |
| 3560 } | |
| 3561 | |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3562 ServerContext& context = OrthancRestApi::GetContext(call); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3563 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3564 std::string publicId = call.GetUriComponent("id", ""); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3565 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3566 std::string dicomContent; |
|
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
3567 context.ReadDicomForHeader(dicomContent, publicId); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3568 |
|
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3569 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3570 // speed up things here |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3571 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3572 ParsedDicomFile dicom(dicomContent); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3573 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3574 Json::Value header; |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3575 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3576 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3577 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3578 } |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3579 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3580 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3581 static void InvalidateTags(RestApiPostCall& call) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3582 { |
| 4420 | 3583 if (call.IsDocumentation()) |
| 3584 { | |
| 3585 call.GetDocumentation() | |
| 3586 .SetTag("System") | |
| 3587 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
| 3588 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
| 3589 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
| 3590 "This is notably useful after changes to the `Dictionary` configuration option. " | |
| 3591 "https://book.orthanc-server.com/faq/orthanc-storage.html#storage-area"); | |
| 3592 return; | |
| 3593 } | |
| 3594 | |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3595 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3596 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3597 // Loop over the instances, grouping them by parent studies so as |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3598 // to avoid large memory consumption |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3599 std::list<std::string> studies; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3600 index.GetAllUuids(studies, ResourceType_Study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3601 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3602 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3603 study = studies.begin(); study != studies.end(); ++study) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3604 { |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3605 std::list<std::string> instances; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3606 index.GetChildInstances(instances, *study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3607 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3608 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3609 instance = instances.begin(); instance != instances.end(); ++instance) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3610 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3611 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3612 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3613 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3614 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3615 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3616 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3617 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3618 |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3619 void DocumentReconstructFilesField(RestApiPostCall& call) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3620 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3621 call.GetDocumentation() |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3622 .SetRequestField(RECONSTRUCT_FILES, RestApiCallDocumentation::Type_Boolean, |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3623 "Also reconstruct the files of the resources (e.g: apply IngestTranscoding, StorageCompression). " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3624 "'false' by default. (New in Orthanc 1.11.0)", false); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3625 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3626 |
| 4994 | 3627 bool GetReconstructFilesField(const RestApiPostCall& call) |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3628 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3629 bool reconstructFiles = false; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3630 Json::Value request; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3631 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3632 if (call.GetBodySize() > 0 && call.ParseJsonRequest(request) && request.isMember(RECONSTRUCT_FILES)) // allow "" payload to keep backward compatibility |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3633 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3634 if (!request[RECONSTRUCT_FILES].isBool()) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3635 { |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3636 throw OrthancException(ErrorCode_BadFileFormat, |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3637 "The field " + std::string(RECONSTRUCT_FILES) + " must contain a Boolean"); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3638 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3639 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3640 reconstructFiles = request[RECONSTRUCT_FILES].asBool(); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3641 } |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3642 |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3643 return reconstructFiles; |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3644 } |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3645 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3646 template <enum ResourceType type> |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3647 static void ReconstructResource(RestApiPostCall& call) |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3648 { |
| 4420 | 3649 if (call.IsDocumentation()) |
| 3650 { | |
| 3651 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
| 3652 call.GetDocumentation() | |
| 3653 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3654 .SetSummary("Reconstruct tags & optionally files of " + resource) |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3655 .SetDescription("Reconstruct the main DICOM tags in DB of the " + resource + " whose Orthanc identifier is provided " |
| 4420 | 3656 "in the URL. This is useful if child studies/series/instances have inconsistent values for " |
| 3657 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
| 3658 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
| 3659 "parsed again, and the Orthanc index will be updated accordingly.") | |
| 3660 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3661 DocumentReconstructFilesField(call); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3662 |
| 4420 | 3663 return; |
| 3664 } | |
| 3665 | |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3666 ServerContext& context = OrthancRestApi::GetContext(call); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3667 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", ""), GetReconstructFilesField(call)); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3668 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3669 } |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3670 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3671 |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3672 static void ReconstructAllResources(RestApiPostCall& call) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3673 { |
| 4420 | 3674 if (call.IsDocumentation()) |
| 3675 { | |
| 3676 call.GetDocumentation() | |
| 3677 .SetTag("System") | |
| 3678 .SetSummary("Reconstruct all the index") | |
| 3679 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
| 3680 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
| 3681 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3682 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated. " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3683 "If you have a large database to process, it is advised to use the Housekeeper plugin to perform " |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3684 "this action resource by resource"); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3685 DocumentReconstructFilesField(call); |
|
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3686 |
| 4420 | 3687 return; |
| 3688 } | |
| 3689 | |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3690 ServerContext& context = OrthancRestApi::GetContext(call); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3691 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3692 std::list<std::string> studies; |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3693 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3694 bool reconstructFiles = GetReconstructFilesField(call); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3695 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3696 for (std::list<std::string>::const_iterator |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3697 study = studies.begin(); study != studies.end(); ++study) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3698 { |
|
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
3699 ServerToolbox::ReconstructResource(context, *study, reconstructFiles); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3700 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3701 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3702 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3703 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3704 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3705 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3706 static void GetBulkChildren(std::set<std::string>& target, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3707 ServerIndex& index, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3708 const std::set<std::string>& source) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3709 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3710 target.clear(); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3711 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3712 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3713 it = source.begin(); it != source.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3714 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3715 std::list<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3716 index.GetChildren(children, *it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3717 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3718 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3719 child = children.begin(); child != children.end(); ++child) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3720 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3721 target.insert(*child); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3722 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3723 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3724 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3725 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3726 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3727 static void AddMetadata(Json::Value& target, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3728 ServerIndex& index, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3729 const std::string& resource, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3730 ResourceType level) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3731 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3732 target = Json::objectValue; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3733 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3734 std::map<MetadataType, std::string> content; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3735 index.GetAllMetadata(content, resource, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3736 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3737 for (std::map<MetadataType, std::string>::const_iterator |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3738 it = content.begin(); it != content.end(); ++it) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3739 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3740 target[EnumerationToString(it->first)] = it->second; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3741 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3742 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3743 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3744 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3745 static void BulkContent(RestApiPostCall& call) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3746 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3747 static const char* const LEVEL = "Level"; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3748 static const char* const METADATA = "Metadata"; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3749 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3750 if (call.IsDocumentation()) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3751 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3752 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3753 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3754 call.GetDocumentation() |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3755 .SetTag("System") |
| 4879 | 3756 .SetSummary("Describe a set of resources") |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3757 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3758 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3759 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3760 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3761 "`Instance`). Orthanc will loop over the items inside `Resources`, and explore upward or " |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3762 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3763 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3764 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3765 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3766 "whose identifiers are provided in the `Resources` field, in one single call."); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3767 return; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3768 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3769 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3770 Json::Value request; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3771 if (!call.ParseJsonRequest(request) || |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3772 request.type() != Json::objectValue) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3773 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3774 throw OrthancException(ErrorCode_BadRequest, |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3775 "The body must contain a JSON object"); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3776 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3777 else |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3778 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3779 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3780 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3781 bool metadata = true; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3782 if (request.isMember(METADATA)) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3783 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3784 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3785 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3786 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3787 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3788 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3789 Json::Value answer = Json::arrayValue; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3790 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3791 if (request.isMember(LEVEL)) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3792 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3793 // Complex case: Need to explore the DICOM hierarchy |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3794 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3795 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3796 std::set<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3797 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3798 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3799 std::set<std::string> interest; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3800 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3801 assert(ResourceType_Patient < ResourceType_Study && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3802 ResourceType_Study < ResourceType_Series && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3803 ResourceType_Series < ResourceType_Instance); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3804 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3805 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3806 it = resources.begin(); it != resources.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3807 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3808 ResourceType type; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3809 if (index.LookupResourceType(type, *it)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3810 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3811 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3812 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3813 // This resource is already from the level of interest |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3814 interest.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3815 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3816 else if (type < level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3817 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3818 // Need to explore children |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3819 std::set<std::string> current; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3820 current.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3821 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3822 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3823 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3824 std::set<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3825 GetBulkChildren(children, index, current); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3826 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3827 type = GetChildResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3828 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3829 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3830 for (std::set<std::string>::const_iterator |
| 4716 | 3831 it2 = children.begin(); it2 != children.end(); ++it2) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3832 { |
| 4716 | 3833 interest.insert(*it2); |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3834 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3835 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3836 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3837 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3838 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3839 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3840 current.swap(children); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3841 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3842 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3843 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3844 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3845 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3846 // Need to explore parents |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3847 std::string current = *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3848 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3849 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3850 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3851 std::string parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3852 if (index.LookupParent(parent, current)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3853 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3854 type = GetParentResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3855 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3856 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3857 interest.insert(parent); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3858 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3859 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3860 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3861 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3862 current = parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3863 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3864 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3865 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3866 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3867 break; // The resource has been deleted during the exploration |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3868 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3869 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3870 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3871 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3872 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3873 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3874 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3875 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3876 } |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3877 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3878 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3879 it = interest.begin(); it != interest.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3880 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3881 Json::Value item; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3882 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3883 |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3884 if (OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3885 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3886 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3887 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3888 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3889 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3890 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3891 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3892 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3893 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3894 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3895 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3896 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3897 // Simple case: We return the queried resources as such |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3898 std::list<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3899 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3900 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3901 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3902 it = resources.begin(); it != resources.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3903 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3904 ResourceType level; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3905 Json::Value item; |
|
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3906 std::set<DicomTag> emptyRequestedTags; // not supported for bulk content |
|
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
3907 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3908 if (index.LookupResourceType(level, *it) && |
|
5058
d4e5ca0c9307
Fix the "Never" option of the "StorageAccessOnFind" that was sill accessing files (bug introduced in 1.11.0)
Alain Mazy <am@osimis.io>
parents:
5054
diff
changeset
|
3909 OrthancRestApi::GetContext(call).ExpandResource(item, *it, level, format, emptyRequestedTags, true /* allowStorageAccess */)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3910 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3911 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3912 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3913 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3914 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3915 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3916 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3917 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3918 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3919 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3920 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3921 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3922 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3923 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3924 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3925 call.GetOutput().AnswerJson(answer); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3926 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3927 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3928 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3929 |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3930 static void BulkDelete(RestApiPostCall& call) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3931 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3932 if (call.IsDocumentation()) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3933 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3934 call.GetDocumentation() |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3935 .SetTag("System") |
| 4879 | 3936 .SetSummary("Delete a set of resources") |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3937 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3938 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3939 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3940 "whose identifiers are provided in the `Resources` field."); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3941 return; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3942 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3943 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3944 ServerContext& context = OrthancRestApi::GetContext(call); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3945 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3946 Json::Value request; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3947 if (!call.ParseJsonRequest(request) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3948 request.type() != Json::objectValue) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3949 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3950 throw OrthancException(ErrorCode_BadRequest, |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3951 "The body must contain a JSON object"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3952 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3953 else |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3954 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3955 std::set<std::string> resources; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3956 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3957 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3958 for (std::set<std::string>::const_iterator |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3959 it = resources.begin(); it != resources.end(); ++it) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3960 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3961 ResourceType type; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3962 Json::Value remainingAncestor; // Unused |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3963 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3964 if (!context.GetIndex().LookupResourceType(type, *it) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3965 !context.DeleteResource(remainingAncestor, *it, type)) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3966 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3967 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3968 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3969 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3970 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3971 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3972 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3973 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3974 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3975 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3976 void OrthancRestApi::RegisterResources() |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3977 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3978 Register("/instances", ListResources<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3979 Register("/patients", ListResources<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3980 Register("/series", ListResources<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3981 Register("/studies", ListResources<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3982 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3983 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3984 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3985 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3986 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3987 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3988 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3989 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3990 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3991 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3992 Register("/instances/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3993 Register("/patients/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3994 Register("/studies/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3995 Register("/series/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3996 |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3997 Register("/patients/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3998 Register("/series/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3999 Register("/studies/{id}/shared-tags", GetSharedTags); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
4000 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4001 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4002 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4003 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4004 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
4005 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
4006 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4007 Register("/instances/{id}/file", GetInstanceFile); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4008 Register("/instances/{id}/export", ExportInstanceFile); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4009 Register("/instances/{id}/tags", GetInstanceTags); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
4010 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4011 Register("/instances/{id}/frames", ListFrames); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4012 |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
4013 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4014 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4015 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4016 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4017 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4018 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4019 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4020 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
4021 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4022 Register("/instances/{id}/frames/{frame}/numpy", GetNumpyFrame); // New in Orthanc 1.10.0 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
4023 Register("/instances/{id}/pdf", ExtractPdf); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4024 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
4025 Register("/instances/{id}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4026 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4027 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4028 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
4029 Register("/instances/{id}/matlab", GetMatlabImage); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
4030 Register("/instances/{id}/header", GetInstanceHeader); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4031 Register("/instances/{id}/numpy", GetNumpyInstance); // New in Orthanc 1.10.0 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4032 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4033 Register("/patients/{id}/protected", IsProtectedPatient); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4034 Register("/patients/{id}/protected", SetPatientProtection); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4035 |
| 4409 | 4036 std::vector<std::string> resourceTypes; |
| 4037 resourceTypes.push_back("patients"); | |
| 4038 resourceTypes.push_back("studies"); | |
| 4039 resourceTypes.push_back("series"); | |
| 4040 resourceTypes.push_back("instances"); | |
| 4041 | |
| 4042 for (size_t i = 0; i < resourceTypes.size(); i++) | |
| 4043 { | |
| 4044 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
| 4045 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
| 4046 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
| 4047 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4048 |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4049 // New in Orthanc 1.12.0 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4050 Register("/" + resourceTypes[i] + "/{id}/labels", ListLabels); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4051 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", GetLabel); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4052 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", RemoveLabel); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4053 Register("/" + resourceTypes[i] + "/{id}/labels/{label}", AddLabel); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5200
diff
changeset
|
4054 |
| 4409 | 4055 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
| 4056 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
| 4057 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
| 4058 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
| 4059 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
| 4060 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
| 4061 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
| 4062 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
| 4063 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
| 4064 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
| 4065 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
| 4066 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
| 4067 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
|
4883
504624b0a062
Added "/patients|studies|series|instances/{...}/attachments/{...}/info" route to retrieve the full information about an attachment (size, type, MD5 and UUID)
Alain Mazy <am@osimis.io>
parents:
4880
diff
changeset
|
4068 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/info", GetAttachmentInfo); |
| 4409 | 4069 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); |
| 4070 } | |
| 782 | 4071 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
4072 Register("/tools/invalidate-tags", InvalidateTags); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4073 Register("/tools/lookup", Lookup); |
| 1354 | 4074 Register("/tools/find", Find); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
4075 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4076 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4077 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4078 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4079 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4080 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4081 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
4082 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4083 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4084 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4085 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4086 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4087 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4088 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
4089 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4090 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4091 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4092 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
4093 |
| 782 | 4094 Register("/instances/{id}/content/*", GetRawContent); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4095 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
4096 Register("/series/{id}/ordered-slices", OrderSlices); |
|
4902
df86d2505df8
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4097 Register("/series/{id}/numpy", GetNumpySeries); // New in Orthanc 1.10.0 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4098 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4099 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4100 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4101 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
4102 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
4103 Register("/tools/reconstruct", ReconstructAllResources); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4104 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
4105 Register("/tools/bulk-content", BulkContent); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
4106 Register("/tools/bulk-delete", BulkDelete); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4107 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4108 } |