Mercurial > hg > orthanc
annotate OrthancServer/Sources/ServerIndex.h @ 4580:49f6b9a2b9f5 db-changes
remove the only use of GlobalProperty_FlushSleep
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Tue, 09 Mar 2021 14:49:39 +0100 |
| parents | 5ee9a4f8a0f0 |
| children | bb3c82b8f373 |
| rev | line source |
|---|---|
| 0 | 1 /** |
| 62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
| 0 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
| 8 * modify it under the terms of the GNU General Public License as | |
| 9 * published by the Free Software Foundation, either version 3 of the | |
| 10 * License, or (at your option) any later version. | |
| 136 | 11 * |
| 12 * In addition, as a special exception, the copyright holders of this | |
| 13 * program give permission to link the code of its release with the | |
| 14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
| 15 * that use the same license as the "OpenSSL" library), and distribute | |
| 16 * the linked executables. You must obey the GNU General Public License | |
| 17 * in all respects for all of the code used other than "OpenSSL". If you | |
| 18 * modify file(s) with this exception, you may extend this exception to | |
| 19 * your version of the file(s), but you are not obligated to do so. If | |
| 20 * you do not wish to do so, delete this exception statement from your | |
| 21 * version. If you delete this exception statement from all source files | |
| 22 * in the program, then also delete it here. | |
| 0 | 23 * |
| 24 * This program is distributed in the hope that it will be useful, but | |
| 25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 27 * General Public License for more details. | |
| 28 * | |
| 29 * You should have received a copy of the GNU General Public License | |
| 30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 31 **/ | |
| 32 | |
| 33 | |
| 34 #pragma once | |
| 35 | |
| 4045 | 36 #include "../../OrthancFramework/Sources/Cache/LeastRecentlyUsedIndex.h" |
| 37 #include "../../OrthancFramework/Sources/DicomFormat/DicomMap.h" | |
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38 |
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39 #include "Database/IDatabaseWrapper.h" |
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40 #include "DicomInstanceOrigin.h" |
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41 |
| 0 | 42 #include <boost/thread.hpp> |
| 220 | 43 #include <boost/noncopyable.hpp> |
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44 |
| 62 | 45 namespace Orthanc |
| 0 | 46 { |
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47 class DatabaseLookup; |
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48 class ParsedDicomFile; |
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49 class ServerContext; |
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50 |
| 220 | 51 class ServerIndex : public boost::noncopyable |
| 0 | 52 { |
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53 public: |
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54 typedef std::list<FileInfo> Attachments; |
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55 typedef std::map<std::pair<ResourceType, MetadataType>, std::string> MetadataMap; |
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56 |
| 0 | 57 private: |
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58 class Listener; |
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59 class Transaction; |
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60 class UnstableResourcePayload; |
| 3027 | 61 class MainDicomTagsRegistry; |
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62 |
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63 bool done_; |
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64 boost::mutex monitoringMutex_; |
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65 boost::thread flushThread_; |
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66 boost::thread unstableResourcesMonitorThread_; |
| 0 | 67 |
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68 std::unique_ptr<Listener> listener_; |
| 1247 | 69 IDatabaseWrapper& db_; |
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70 LeastRecentlyUsedIndex<int64_t, UnstableResourcePayload> unstableResources_; |
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71 |
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72 uint64_t maximumStorageSize_; |
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73 unsigned int maximumPatients_; |
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74 std::unique_ptr<MainDicomTagsRegistry> mainDicomTagsRegistry_; |
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75 |
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76 static void FlushThread(ServerIndex* that, |
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77 unsigned int threadSleep); |
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78 |
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79 static void UnstableResourcesMonitorThread(ServerIndex* that, |
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80 unsigned int threadSleep); |
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81 |
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82 void StandaloneRecycling(uint64_t maximumStorageSize, |
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83 unsigned int maximumPatientCount); |
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84 |
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85 void MarkAsUnstable(int64_t id, |
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86 Orthanc::ResourceType type, |
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87 const std::string& publicId); |
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88 |
| 1237 | 89 void LogChange(int64_t internalId, |
| 90 ChangeType changeType, | |
| 91 ResourceType resourceType, | |
| 1297 | 92 const std::string& publicId); |
| 1237 | 93 |
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94 void NormalizeLookup(std::vector<DatabaseConstraint>& target, |
| 3027 | 95 const DatabaseLookup& source, |
| 96 ResourceType level) const; | |
| 97 | |
| 4554 | 98 bool IsUnstableResource(int64_t id); |
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99 |
| 0 | 100 public: |
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101 ServerIndex(ServerContext& context, |
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102 IDatabaseWrapper& database, |
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103 unsigned int threadSleepGranularityMilliseconds); |
| 0 | 104 |
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105 ~ServerIndex(); |
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106 |
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107 void Stop(); |
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108 |
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109 // "size == 0" means no limit on the storage size |
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110 void SetMaximumStorageSize(uint64_t size); |
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111 |
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112 // "count == 0" means no limit on the number of patients |
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113 void SetMaximumPatientCount(unsigned int count); |
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114 |
| 0 | 115 |
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116 |
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117 /*** |
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118 ** PROTOTYPING FOR DB REFACTORING BELOW |
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119 ***/ |
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120 |
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121 public: |
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122 class ReadOnlyTransaction : public boost::noncopyable |
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123 { |
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124 protected: |
| 4554 | 125 IDatabaseWrapper& db_; |
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126 |
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127 public: |
| 4555 | 128 explicit ReadOnlyTransaction(IDatabaseWrapper& db) : |
| 4554 | 129 db_(db) |
| 130 { | |
| 131 } | |
| 132 | |
| 133 /** | |
| 134 * Higher-level constructions | |
| 135 **/ | |
| 136 | |
| 137 SeriesStatus GetSeriesStatus(int64_t id, | |
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138 int64_t expectedNumberOfInstances); |
| 4554 | 139 |
| 140 void MainDicomTagsToJson(Json::Value& result, | |
| 141 int64_t resourceId, | |
| 4578 | 142 ResourceType resourceType); |
| 4554 | 143 |
| 144 /** | |
| 145 * Read-only methods from "IDatabaseWrapper" | |
| 146 **/ | |
| 147 | |
| 4562 | 148 void ApplyLookupResources(std::list<std::string>& resourcesId, |
| 149 std::list<std::string>* instancesId, // Can be NULL if not needed | |
| 150 const std::vector<DatabaseConstraint>& lookup, | |
| 151 ResourceType queryLevel, | |
| 152 size_t limit) | |
| 153 { | |
| 154 return db_.ApplyLookupResources(resourcesId, instancesId, lookup, queryLevel, limit); | |
| 155 } | |
| 156 | |
| 4554 | 157 void GetAllMetadata(std::map<MetadataType, std::string>& target, |
| 158 int64_t id) | |
| 159 { | |
| 160 db_.GetAllMetadata(target, id); | |
| 4555 | 161 } |
| 162 | |
| 163 void GetAllPublicIds(std::list<std::string>& target, | |
| 164 ResourceType resourceType) | |
| 165 { | |
| 166 return db_.GetAllPublicIds(target, resourceType); | |
| 167 } | |
| 168 | |
| 169 void GetAllPublicIds(std::list<std::string>& target, | |
| 170 ResourceType resourceType, | |
| 171 size_t since, | |
| 172 size_t limit) | |
| 173 { | |
| 174 return db_.GetAllPublicIds(target, resourceType, since, limit); | |
| 175 } | |
| 4554 | 176 |
| 4558 | 177 void GetChanges(std::list<ServerIndexChange>& target /*out*/, |
| 178 bool& done /*out*/, | |
| 179 int64_t since, | |
| 180 uint32_t maxResults) | |
| 181 { | |
| 182 db_.GetChanges(target, done, since, maxResults); | |
| 183 } | |
| 184 | |
| 4559 | 185 void GetChildrenInternalId(std::list<int64_t>& target, |
| 186 int64_t id) | |
| 187 { | |
| 188 db_.GetChildrenInternalId(target, id); | |
| 189 } | |
| 190 | |
| 4554 | 191 void GetChildrenPublicId(std::list<std::string>& target, |
| 192 int64_t id) | |
| 193 { | |
| 194 db_.GetChildrenPublicId(target, id); | |
| 195 } | |
| 196 | |
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197 unsigned int GetDatabaseVersion() |
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198 { |
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199 return db_.GetDatabaseVersion(); |
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200 } |
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201 |
| 4558 | 202 void GetExportedResources(std::list<ExportedResource>& target /*out*/, |
| 203 bool& done /*out*/, | |
| 204 int64_t since, | |
| 205 uint32_t maxResults) | |
| 206 { | |
| 207 return db_.GetExportedResources(target, done, since, maxResults); | |
| 208 } | |
| 209 | |
| 210 void GetLastChange(std::list<ServerIndexChange>& target /*out*/) | |
| 211 { | |
| 212 db_.GetLastChange(target); | |
| 213 } | |
| 214 | |
| 215 void GetLastExportedResource(std::list<ExportedResource>& target /*out*/) | |
| 216 { | |
| 217 return db_.GetLastExportedResource(target); | |
| 218 } | |
| 219 | |
| 220 int64_t GetLastChangeIndex() | |
| 221 { | |
| 222 return db_.GetLastChangeIndex(); | |
| 223 } | |
| 224 | |
| 4554 | 225 void GetMainDicomTags(DicomMap& map, |
| 226 int64_t id) | |
| 227 { | |
| 228 db_.GetMainDicomTags(map, id); | |
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229 } |
| 4558 | 230 |
| 4559 | 231 std::string GetPublicId(int64_t resourceId) |
| 232 { | |
| 233 return db_.GetPublicId(resourceId); | |
| 234 } | |
| 235 | |
| 4558 | 236 uint64_t GetResourceCount(ResourceType resourceType) |
| 237 { | |
| 238 return db_.GetResourceCount(resourceType); | |
| 239 } | |
| 240 | |
| 4559 | 241 ResourceType GetResourceType(int64_t resourceId) |
| 242 { | |
| 243 return db_.GetResourceType(resourceId); | |
| 244 } | |
| 245 | |
| 4558 | 246 uint64_t GetTotalCompressedSize() |
| 247 { | |
| 248 return db_.GetTotalCompressedSize(); | |
| 249 } | |
| 250 | |
| 251 uint64_t GetTotalUncompressedSize() | |
| 252 { | |
| 253 return db_.GetTotalUncompressedSize(); | |
| 254 } | |
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255 |
| 4559 | 256 bool IsProtectedPatient(int64_t internalId) |
| 257 { | |
| 258 return db_.IsProtectedPatient(internalId); | |
| 259 } | |
| 260 | |
| 4560 | 261 void ListAvailableAttachments(std::set<FileContentType>& target, |
| 262 int64_t id) | |
| 263 { | |
| 264 db_.ListAvailableAttachments(target, id); | |
| 265 } | |
| 266 | |
| 4554 | 267 bool LookupAttachment(FileInfo& attachment, |
| 268 int64_t id, | |
| 269 FileContentType contentType) | |
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270 { |
| 4554 | 271 return db_.LookupAttachment(attachment, id, contentType); |
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272 } |
| 4554 | 273 |
| 4562 | 274 bool LookupGlobalProperty(std::string& target, |
| 275 GlobalProperty property) | |
| 276 { | |
| 277 return db_.LookupGlobalProperty(target, property); | |
| 278 } | |
| 279 | |
| 4560 | 280 bool LookupMetadata(std::string& target, |
| 281 int64_t id, | |
| 282 MetadataType type) | |
| 283 { | |
| 284 return db_.LookupMetadata(target, id, type); | |
| 285 } | |
| 286 | |
| 287 bool LookupParent(int64_t& parentId, | |
| 288 int64_t resourceId) | |
| 289 { | |
| 290 return db_.LookupParent(parentId, resourceId); | |
| 291 } | |
| 292 | |
| 4554 | 293 bool LookupResource(int64_t& id, |
| 294 ResourceType& type, | |
| 295 const std::string& publicId) | |
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296 { |
| 4554 | 297 return db_.LookupResource(id, type, publicId); |
| 298 } | |
| 299 | |
| 300 bool LookupResourceAndParent(int64_t& id, | |
| 301 ResourceType& type, | |
| 302 std::string& parentPublicId, | |
| 303 const std::string& publicId) | |
| 304 { | |
| 305 return db_.LookupResourceAndParent(id, type, parentPublicId, publicId); | |
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306 } |
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307 }; |
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308 |
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309 |
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310 class ReadWriteTransaction : public ReadOnlyTransaction |
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311 { |
| 4567 | 312 private: |
| 4573 | 313 Listener& listener_; |
| 314 ServerIndex& index_; // TODO - REMOVE | |
| 4567 | 315 |
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316 public: |
| 4567 | 317 ReadWriteTransaction(IDatabaseWrapper& db, |
| 4573 | 318 Listener& listener, |
| 4567 | 319 ServerIndex& index) : |
| 320 ReadOnlyTransaction(db), | |
| 4573 | 321 listener_(listener), |
| 322 index_(index) | |
| 4567 | 323 { |
| 324 } | |
| 325 | |
| 4573 | 326 Listener& GetListener() |
| 327 { | |
| 328 return listener_; | |
| 329 } | |
| 330 | |
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331 void AddAttachment(int64_t id, |
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332 const FileInfo& attachment) |
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333 { |
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334 db_.AddAttachment(id, attachment); |
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335 } |
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336 |
| 4567 | 337 void ClearChanges() |
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338 { |
| 4567 | 339 db_.ClearChanges(); |
| 340 } | |
| 341 | |
| 342 void ClearExportedResources() | |
| 343 { | |
| 344 db_.ClearExportedResources(); | |
| 345 } | |
| 346 | |
| 4574 | 347 void ClearMainDicomTags(int64_t id) |
| 348 { | |
| 349 return db_.ClearMainDicomTags(id); | |
| 350 } | |
| 351 | |
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352 bool CreateInstance(IDatabaseWrapper::CreateInstanceResult& result, /* out */ |
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353 int64_t& instanceId, /* out */ |
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354 const std::string& patient, |
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355 const std::string& study, |
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356 const std::string& series, |
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357 const std::string& instance) |
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358 { |
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359 return db_.CreateInstance(result, instanceId, patient, study, series, instance); |
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360 } |
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361 |
| 4568 | 362 void DeleteAttachment(int64_t id, |
| 363 FileContentType attachment) | |
| 364 { | |
| 365 return db_.DeleteAttachment(id, attachment); | |
| 366 } | |
| 367 | |
| 4567 | 368 void DeleteMetadata(int64_t id, |
| 369 MetadataType type) | |
| 370 { | |
| 371 db_.DeleteMetadata(id, type); | |
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372 } |
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373 |
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374 void DeleteResource(int64_t id) |
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375 { |
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376 db_.DeleteResource(id); |
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377 } |
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378 |
| 4567 | 379 void LogChange(int64_t internalId, |
| 380 ChangeType changeType, | |
| 381 ResourceType resourceType, | |
| 382 const std::string& publicId) | |
| 383 { | |
| 384 index_.LogChange(internalId, changeType, resourceType, publicId); | |
| 385 } | |
| 386 | |
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387 void LogExportedResource(const ExportedResource& resource) |
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388 { |
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389 db_.LogExportedResource(resource); |
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390 } |
| 4567 | 391 |
| 392 void SetGlobalProperty(GlobalProperty property, | |
| 393 const std::string& value) | |
| 394 { | |
| 395 db_.SetGlobalProperty(property, value); | |
| 396 } | |
| 397 | |
| 398 void SetMetadata(int64_t id, | |
| 399 MetadataType type, | |
| 400 const std::string& value) | |
| 401 { | |
| 402 return db_.SetMetadata(id, type, value); | |
| 403 } | |
| 404 | |
| 405 void SetProtectedPatient(int64_t internalId, | |
| 406 bool isProtected) | |
| 407 { | |
| 408 db_.SetProtectedPatient(internalId, isProtected); | |
| 409 } | |
| 4574 | 410 |
| 411 void SetResourcesContent(const ResourcesContent& content) | |
| 412 { | |
| 413 db_.SetResourcesContent(content); | |
| 414 } | |
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415 |
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416 void Recycle(uint64_t maximumStorageSize, |
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417 unsigned int maximumPatients, |
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418 uint64_t addedInstanceSize, |
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419 const std::string& newPatientId); |
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420 }; |
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421 |
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422 |
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423 class IReadOnlyOperations : public boost::noncopyable |
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424 { |
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425 public: |
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426 virtual ~IReadOnlyOperations() |
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427 { |
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428 } |
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429 |
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430 virtual void Apply(ReadOnlyTransaction& transaction) = 0; |
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431 }; |
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432 |
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433 |
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434 class IReadWriteOperations : public boost::noncopyable |
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435 { |
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436 public: |
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437 virtual ~IReadWriteOperations() |
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438 { |
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439 } |
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440 |
| 4573 | 441 virtual void Apply(ReadWriteTransaction& transaction) = 0; |
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442 }; |
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443 |
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444 private: |
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445 void ApplyInternal(IReadOnlyOperations* readOperations, |
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446 IReadWriteOperations* writeOperations); |
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447 |
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448 unsigned int maxRetries_; |
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449 |
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450 public: |
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451 void Apply(IReadOnlyOperations& operations); |
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452 |
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453 void Apply(IReadWriteOperations& operations); |
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454 |
| 4554 | 455 bool ExpandResource(Json::Value& target, |
| 456 const std::string& publicId, | |
| 457 ResourceType level); | |
| 458 | |
| 459 void GetAllMetadata(std::map<MetadataType, std::string>& target, | |
| 460 const std::string& publicId, | |
| 461 ResourceType level); | |
| 4555 | 462 |
| 463 void GetAllUuids(std::list<std::string>& target, | |
| 464 ResourceType resourceType); | |
| 465 | |
| 466 void GetAllUuids(std::list<std::string>& target, | |
| 467 ResourceType resourceType, | |
| 468 size_t since, | |
| 469 size_t limit); | |
| 470 | |
| 4558 | 471 void GetGlobalStatistics(/* out */ uint64_t& diskSize, |
| 472 /* out */ uint64_t& uncompressedSize, | |
| 473 /* out */ uint64_t& countPatients, | |
| 474 /* out */ uint64_t& countStudies, | |
| 475 /* out */ uint64_t& countSeries, | |
| 476 /* out */ uint64_t& countInstances); | |
| 477 | |
| 4555 | 478 bool LookupAttachment(FileInfo& attachment, |
| 479 const std::string& instancePublicId, | |
| 480 FileContentType contentType); | |
| 4558 | 481 |
| 482 void GetChanges(Json::Value& target, | |
| 483 int64_t since, | |
| 484 unsigned int maxResults); | |
| 485 | |
| 486 void GetLastChange(Json::Value& target); | |
| 487 | |
| 488 void GetExportedResources(Json::Value& target, | |
| 489 int64_t since, | |
| 490 unsigned int maxResults); | |
| 491 | |
| 492 void GetLastExportedResource(Json::Value& target); | |
| 493 | |
| 4559 | 494 bool IsProtectedPatient(const std::string& publicId); |
| 495 | |
| 496 void GetChildren(std::list<std::string>& result, | |
| 497 const std::string& publicId); | |
| 498 | |
| 499 void GetChildInstances(std::list<std::string>& result, | |
| 500 const std::string& publicId); | |
| 4560 | 501 |
| 502 bool LookupMetadata(std::string& target, | |
| 503 const std::string& publicId, | |
| 504 ResourceType expectedType, | |
| 505 MetadataType type); | |
| 506 | |
| 507 void ListAvailableAttachments(std::set<FileContentType>& target, | |
| 508 const std::string& publicId, | |
| 509 ResourceType expectedType); | |
| 510 | |
| 511 bool LookupParent(std::string& target, | |
| 512 const std::string& publicId); | |
| 4562 | 513 |
| 514 void GetResourceStatistics(/* out */ ResourceType& type, | |
| 515 /* out */ uint64_t& diskSize, | |
| 516 /* out */ uint64_t& uncompressedSize, | |
| 517 /* out */ unsigned int& countStudies, | |
| 518 /* out */ unsigned int& countSeries, | |
| 519 /* out */ unsigned int& countInstances, | |
| 520 /* out */ uint64_t& dicomDiskSize, | |
| 521 /* out */ uint64_t& dicomUncompressedSize, | |
| 522 const std::string& publicId); | |
| 523 | |
| 524 void LookupIdentifierExact(std::vector<std::string>& result, | |
| 525 ResourceType level, | |
| 526 const DicomTag& tag, | |
| 527 const std::string& value); | |
| 528 | |
| 529 bool LookupGlobalProperty(std::string& value, | |
| 530 GlobalProperty property); | |
| 531 | |
| 532 std::string GetGlobalProperty(GlobalProperty property, | |
| 533 const std::string& defaultValue); | |
| 534 | |
| 535 bool GetMainDicomTags(DicomMap& result, | |
| 536 const std::string& publicId, | |
| 537 ResourceType expectedType, | |
| 538 ResourceType levelOfInterest); | |
|
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539 |
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540 // Only applicable at the instance level |
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541 bool GetAllMainDicomTags(DicomMap& result, |
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542 const std::string& instancePublicId); |
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543 |
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544 bool LookupResourceType(ResourceType& type, |
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545 const std::string& publicId); |
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546 |
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547 unsigned int GetDatabaseVersion(); |
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548 |
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549 bool LookupParent(std::string& target, |
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550 const std::string& publicId, |
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551 ResourceType parentType); |
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552 |
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553 void ApplyLookupResources(std::vector<std::string>& resourcesId, |
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554 std::vector<std::string>* instancesId, // Can be NULL if not needed |
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555 const DatabaseLookup& lookup, |
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556 ResourceType queryLevel, |
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557 size_t limit); |
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558 |
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559 bool DeleteResource(Json::Value& target /* out */, |
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560 const std::string& uuid, |
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561 ResourceType expectedType); |
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562 |
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563 void LogExportedResource(const std::string& publicId, |
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564 const std::string& remoteModality); |
| 4567 | 565 |
| 566 void SetProtectedPatient(const std::string& publicId, | |
| 567 bool isProtected); | |
| 568 | |
| 569 void SetMetadata(const std::string& publicId, | |
| 570 MetadataType type, | |
| 571 const std::string& value); | |
| 572 | |
| 573 void DeleteMetadata(const std::string& publicId, | |
| 574 MetadataType type); | |
| 575 | |
| 576 uint64_t IncrementGlobalSequence(GlobalProperty sequence); | |
| 577 | |
| 578 void DeleteChanges(); | |
| 579 | |
| 580 void DeleteExportedResources(); | |
| 581 | |
| 582 void SetGlobalProperty(GlobalProperty property, | |
| 583 const std::string& value); | |
| 4568 | 584 |
| 585 void DeleteAttachment(const std::string& publicId, | |
| 586 FileContentType type); | |
| 587 | |
| 588 void LogChange(ChangeType changeType, | |
| 4579 | 589 const std::string& publicId, |
| 590 ResourceType level); | |
| 4574 | 591 |
| 592 void ReconstructInstance(const ParsedDicomFile& dicom); | |
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593 |
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594 StoreStatus Store(std::map<MetadataType, std::string>& instanceMetadata, |
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595 const DicomMap& dicomSummary, |
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596 const Attachments& attachments, |
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597 const MetadataMap& metadata, |
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598 const DicomInstanceOrigin& origin, |
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599 bool overwrite, |
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600 bool hasTransferSyntax, |
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601 DicomTransferSyntax transferSyntax, |
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602 bool hasPixelDataOffset, |
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603 uint64_t pixelDataOffset); |
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604 |
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605 StoreStatus AddAttachment(const FileInfo& attachment, |
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606 const std::string& publicId); |
| 0 | 607 }; |
| 608 } |