Mercurial > hg > orthanc
annotate OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h @ 4137:6774605d4341
keep only one signature for FromDcmtkBridge::ExtractDicomSummary()
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Thu, 06 Aug 2020 17:38:55 +0200 |
| parents | 2724977419fb |
| children | 0ddc5297a8ab |
| rev | line source |
|---|---|
| 0 | 1 /** |
| 62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
| 0 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
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8 * modify it under the terms of the GNU Lesser General Public License |
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9 * as published by the Free Software Foundation, either version 3 of |
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10 * the License, or (at your option) any later version. |
| 136 | 11 * |
| 0 | 12 * This program is distributed in the hope that it will be useful, but |
| 13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
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15 * Lesser General Public License for more details. |
| 0 | 16 * |
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17 * You should have received a copy of the GNU Lesser General Public |
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18 * License along with this program. If not, see |
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19 * <http://www.gnu.org/licenses/>. |
| 0 | 20 **/ |
| 21 | |
| 22 | |
| 23 #pragma once | |
| 24 | |
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25 #include "ITagVisitor.h" |
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26 #include "../DicomFormat/DicomElement.h" |
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27 #include "../DicomFormat/DicomMap.h" |
| 791 | 28 |
| 0 | 29 #include <dcmtk/dcmdata/dcdatset.h> |
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30 #include <dcmtk/dcmdata/dcmetinf.h> |
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31 #include <dcmtk/dcmdata/dcpixseq.h> |
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32 #include <dcmtk/dcmdata/dcfilefo.h> |
| 0 | 33 #include <json/json.h> |
| 34 | |
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35 #if ORTHANC_ENABLE_DCMTK != 1 |
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36 # error The macro ORTHANC_ENABLE_DCMTK must be set to 1 |
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37 #endif |
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38 |
| 2126 | 39 #if ORTHANC_BUILD_UNIT_TESTS == 1 |
| 40 # include <gtest/gtest_prod.h> | |
| 41 #endif | |
| 42 | |
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43 #if !defined(ORTHANC_ENABLE_DCMTK_JPEG) |
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44 # error The macro ORTHANC_ENABLE_DCMTK_JPEG must be defined |
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45 #endif |
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46 |
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47 #if !defined(ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS) |
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48 # error The macro ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS must be defined |
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49 #endif |
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50 |
| 2126 | 51 |
| 62 | 52 namespace Orthanc |
| 0 | 53 { |
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54 class ORTHANC_PUBLIC FromDcmtkBridge : public boost::noncopyable |
| 0 | 55 { |
| 2126 | 56 #if ORTHANC_BUILD_UNIT_TESTS == 1 |
| 57 FRIEND_TEST(FromDcmtkBridge, FromJson); | |
| 58 #endif | |
| 59 | |
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60 friend class ParsedDicomFile; |
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61 |
| 2125 | 62 private: |
| 63 FromDcmtkBridge(); // Pure static class | |
| 64 | |
| 2126 | 65 static void DatasetToJson(Json::Value& parent, |
| 66 DcmItem& item, | |
| 67 DicomToJsonFormat format, | |
| 68 DicomToJsonFlags flags, | |
| 69 unsigned int maxStringLength, | |
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70 Encoding encoding, |
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71 bool hasCodeExtensions, |
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72 const std::set<DicomTag>& ignoreTagLength); |
| 2126 | 73 |
| 74 static void ElementToJson(Json::Value& parent, | |
| 75 DcmElement& element, | |
| 76 DicomToJsonFormat format, | |
| 77 DicomToJsonFlags flags, | |
| 78 unsigned int maxStringLength, | |
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79 Encoding dicomEncoding, |
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80 bool hasCodeExtensions, |
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81 const std::set<DicomTag>& ignoreTagLength); |
| 2126 | 82 |
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83 static void ExtractDicomAsJson(Json::Value& target, |
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84 DcmDataset& dataset, |
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85 DicomToJsonFormat format, |
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86 DicomToJsonFlags flags, |
| 2131 | 87 unsigned int maxStringLength, |
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88 Encoding defaultEncoding, |
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89 const std::set<DicomTag>& ignoreTagLength); |
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90 |
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91 static void ChangeStringEncoding(DcmItem& dataset, |
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92 Encoding source, |
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93 bool hasSourceCodeExtensions, |
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94 Encoding target); |
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95 |
| 0 | 96 public: |
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97 static void InitializeDictionary(bool loadPrivateDictionary); |
| 1656 | 98 |
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99 static void RegisterDictionaryTag(const DicomTag& tag, |
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100 ValueRepresentation vr, |
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101 const std::string& name, |
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102 unsigned int minMultiplicity, |
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103 unsigned int maxMultiplicity, |
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104 const std::string& privateCreator); |
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105 |
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106 static Encoding DetectEncoding(bool& hasCodeExtensions, |
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107 DcmItem& dataset, |
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108 Encoding defaultEncoding); |
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109 |
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110 static Encoding DetectEncoding(DcmItem& dataset, |
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111 Encoding defaultEncoding) |
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112 { |
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113 // Compatibility wrapper for Orthanc <= 1.5.4 |
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114 bool hasCodeExtensions; // ignored |
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115 return DetectEncoding(hasCodeExtensions, dataset, defaultEncoding); |
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116 } |
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117 |
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118 static DicomTag Convert(const DcmTag& tag); |
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119 |
| 0 | 120 static DicomTag GetTag(const DcmElement& element); |
| 121 | |
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122 static bool IsUnknownTag(const DicomTag& tag); |
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123 |
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124 static DicomValue* ConvertLeafElement(DcmElement& element, |
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125 DicomToJsonFlags flags, |
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126 unsigned int maxStringLength, |
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127 Encoding encoding, |
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128 bool hasCodeExtensions, |
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129 const std::set<DicomTag>& ignoreTagLength); |
| 0 | 130 |
| 2126 | 131 static void ExtractHeaderAsJson(Json::Value& target, |
| 132 DcmMetaInfo& header, | |
| 133 DicomToJsonFormat format, | |
| 134 DicomToJsonFlags flags, | |
| 135 unsigned int maxStringLength); | |
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136 |
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137 static std::string GetTagName(const DicomTag& tag, |
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138 const std::string& privateCreator); |
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139 |
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140 static std::string GetTagName(const DcmElement& element); |
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141 |
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142 static std::string GetTagName(const DicomElement& element) |
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143 { |
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144 return GetTagName(element.GetTag(), ""); |
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145 } |
| 0 | 146 |
| 304 | 147 static DicomTag ParseTag(const char* name); |
| 0 | 148 |
| 304 | 149 static DicomTag ParseTag(const std::string& name) |
| 0 | 150 { |
| 304 | 151 return ParseTag(name.c_str()); |
| 0 | 152 } |
| 153 | |
| 154 static bool HasTag(const DicomMap& fields, | |
| 155 const std::string& tagName) | |
| 156 { | |
| 304 | 157 return fields.HasTag(ParseTag(tagName)); |
| 0 | 158 } |
| 159 | |
| 160 static const DicomValue& GetValue(const DicomMap& fields, | |
| 161 const std::string& tagName) | |
| 162 { | |
| 304 | 163 return fields.GetValue(ParseTag(tagName)); |
| 0 | 164 } |
| 165 | |
| 166 static void SetValue(DicomMap& target, | |
| 167 const std::string& tagName, | |
| 168 DicomValue* value) | |
| 169 { | |
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170 const DicomTag tag = ParseTag(tagName); |
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171 target.SetValueInternal(tag.GetGroup(), tag.GetElement(), value); |
| 0 | 172 } |
| 173 | |
| 174 static void ToJson(Json::Value& result, | |
| 1368 | 175 const DicomMap& values, |
| 176 bool simplify); | |
| 176 | 177 |
| 788 | 178 static std::string GenerateUniqueIdentifier(ResourceType level); |
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179 |
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180 static bool SaveToMemoryBuffer(std::string& buffer, |
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181 DcmDataset& dataSet); |
| 1360 | 182 |
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183 static bool Transcode(DcmFileFormat& dicom, |
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184 DicomTransferSyntax syntax, |
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185 const DcmRepresentationParameter* representation); |
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186 |
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187 static ValueRepresentation Convert(DcmEVR vr); |
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188 |
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189 static ValueRepresentation LookupValueRepresentation(const DicomTag& tag); |
| 1689 | 190 |
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191 static DcmElement* CreateElementForTag(const DicomTag& tag, |
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192 const std::string& privateCreator); |
| 1689 | 193 |
| 194 static void FillElementWithString(DcmElement& element, | |
| 1695 | 195 const std::string& utf8alue, // Encoded using UTF-8 |
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196 bool decodeDataUriScheme, |
| 1695 | 197 Encoding dicomEncoding); |
| 1689 | 198 |
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199 static DcmElement* FromJson(const DicomTag& tag, |
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200 const Json::Value& element, // Encoded using UTF-8 |
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201 bool decodeDataUriScheme, |
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202 Encoding dicomEncoding, |
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203 const std::string& privateCreator); |
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204 |
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205 static DcmPixelSequence* GetPixelSequence(DcmDataset& dataset); |
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206 |
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207 static Encoding ExtractEncoding(const Json::Value& json, |
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208 Encoding defaultEncoding); |
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209 |
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210 static DcmDataset* FromJson(const Json::Value& json, // Encoded using UTF-8 |
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211 bool generateIdentifiers, |
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212 bool decodeDataUriScheme, |
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213 Encoding defaultEncoding, |
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214 const std::string& privateCreator); |
|
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215 |
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216 static DcmFileFormat* LoadFromMemoryBuffer(const void* buffer, |
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217 size_t size); |
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218 |
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219 static void FromJson(DicomMap& values, |
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220 const Json::Value& result); |
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221 |
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222 static void ExtractDicomSummary(DicomMap& target, |
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223 DcmItem& dataset, |
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224 unsigned int maxStringLength, |
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225 const std::set<DicomTag>& ignoreTagLength); |
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226 |
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227 static void ExtractDicomAsJson(Json::Value& target, |
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228 DcmDataset& dataset, |
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229 const std::set<DicomTag>& ignoreTagLength); |
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230 |
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231 static void InitializeCodecs(); |
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232 |
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233 static void FinalizeCodecs(); |
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234 |
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235 static void Apply(DcmItem& dataset, |
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236 ITagVisitor& visitor, |
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237 Encoding defaultEncoding); |
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238 |
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239 static bool LookupDcmtkTransferSyntax(E_TransferSyntax& target, |
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240 DicomTransferSyntax source); |
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241 |
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242 static bool LookupOrthancTransferSyntax(DicomTransferSyntax& target, |
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243 E_TransferSyntax source); |
| 3881 | 244 |
| 245 static bool LookupOrthancTransferSyntax(DicomTransferSyntax& target, | |
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246 DcmFileFormat& dicom); |
| 0 | 247 }; |
| 248 } |