annotate OrthancServer/FromDcmtkBridge.h @ 2128:9329ba17a069

Possibility to DELETE "dicom-as-json" attachments to reconstruct them
author Sebastien Jodogne <s.jodogne@gmail.com>
date Mon, 07 Nov 2016 15:13:16 +0100
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children bb199bccdc45
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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33 #pragma once
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34
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35 #include "ServerEnumerations.h"
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36 #include "OrthancInitialization.h"
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38 #include "../Core/DicomFormat/DicomElement.h"
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39 #include "../Core/DicomFormat/DicomMap.h"
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40
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41 #include <dcmtk/dcmdata/dcdatset.h>
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42 #include <dcmtk/dcmdata/dcmetinf.h>
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43 #include <dcmtk/dcmdata/dcpixseq.h>
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44 #include <dcmtk/dcmdata/dcfilefo.h>
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45 #include <json/json.h>
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46
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47 #if ORTHANC_BUILD_UNIT_TESTS == 1
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48 # include <gtest/gtest_prod.h>
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49 #endif
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51
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52 namespace Orthanc
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53 {
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54 class FromDcmtkBridge : public boost::noncopyable
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55 {
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56 #if ORTHANC_BUILD_UNIT_TESTS == 1
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57 FRIEND_TEST(FromDcmtkBridge, FromJson);
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58 #endif
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59
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60 friend class ParsedDicomFile;
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61
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62 private:
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63 FromDcmtkBridge(); // Pure static class
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64
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65 static void ExtractDicomSummary(DicomMap& target,
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66 DcmItem& dataset,
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67 unsigned int maxStringLength,
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68 Encoding defaultEncoding);
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69
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70 static void DatasetToJson(Json::Value& parent,
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71 DcmItem& item,
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72 DicomToJsonFormat format,
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73 DicomToJsonFlags flags,
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74 unsigned int maxStringLength,
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75 Encoding encoding);
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76
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77 static void ElementToJson(Json::Value& parent,
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78 DcmElement& element,
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79 DicomToJsonFormat format,
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80 DicomToJsonFlags flags,
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81 unsigned int maxStringLength,
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82 Encoding dicomEncoding);
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84 static void ExtractDicomAsJson(Json::Value& target,
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85 DcmDataset& dataset,
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86 DicomToJsonFormat format,
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87 DicomToJsonFlags flags,
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88 unsigned int maxStringLength);
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89
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90 public:
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91 static void InitializeDictionary();
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92
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93 static void RegisterDictionaryTag(const DicomTag& tag,
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94 ValueRepresentation vr,
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95 const std::string& name,
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96 unsigned int minMultiplicity,
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97 unsigned int maxMultiplicity,
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98 const std::string& privateCreator);
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99
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100 static Encoding DetectEncoding(DcmItem& dataset,
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101 Encoding defaultEncoding);
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102
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103 static void ExtractDicomSummary(DicomMap& target,
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104 DcmItem& dataset)
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105 {
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106 ExtractDicomSummary(target, dataset, ORTHANC_MAXIMUM_TAG_LENGTH, Configuration::GetDefaultEncoding());
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107 }
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108
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109 static DicomTag Convert(const DcmTag& tag);
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110
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111 static DicomTag GetTag(const DcmElement& element);
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112
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113 static bool IsUnknownTag(const DicomTag& tag);
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114
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115 static DicomValue* ConvertLeafElement(DcmElement& element,
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116 DicomToJsonFlags flags,
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117 unsigned int maxStringLength,
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118 Encoding encoding);
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119
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120 static void ExtractDicomAsJson(Json::Value& target,
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121 DcmDataset& dataset)
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122 {
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123 ExtractDicomAsJson(target, dataset, DicomToJsonFormat_Full, DicomToJsonFlags_Default, ORTHANC_MAXIMUM_TAG_LENGTH);
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124 }
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125
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126 static void ExtractHeaderAsJson(Json::Value& target,
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127 DcmMetaInfo& header,
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128 DicomToJsonFormat format,
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129 DicomToJsonFlags flags,
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130 unsigned int maxStringLength);
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131
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132 static std::string GetTagName(const DicomTag& tag,
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133 const std::string& privateCreator);
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134
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135 static std::string GetTagName(const DcmElement& element);
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136
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137 static std::string GetTagName(const DicomElement& element)
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138 {
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139 return GetTagName(element.GetTag(), "");
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140 }
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141
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142 static DicomTag ParseTag(const char* name);
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143
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144 static DicomTag ParseTag(const std::string& name)
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145 {
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146 return ParseTag(name.c_str());
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147 }
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148
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149 static bool HasTag(const DicomMap& fields,
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150 const std::string& tagName)
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151 {
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152 return fields.HasTag(ParseTag(tagName));
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153 }
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154
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155 static const DicomValue& GetValue(const DicomMap& fields,
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156 const std::string& tagName)
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157 {
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158 return fields.GetValue(ParseTag(tagName));
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159 }
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160
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161 static void SetValue(DicomMap& target,
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162 const std::string& tagName,
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163 DicomValue* value)
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164 {
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165 target.SetValue(ParseTag(tagName), value);
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166 }
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167
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168 static void ToJson(Json::Value& result,
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169 const DicomMap& values,
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170 bool simplify);
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171
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172 static std::string GenerateUniqueIdentifier(ResourceType level);
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173
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174 static bool SaveToMemoryBuffer(std::string& buffer,
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175 DcmDataset& dataSet);
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176
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177 static ValueRepresentation Convert(DcmEVR vr);
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178
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179 static ValueRepresentation LookupValueRepresentation(const DicomTag& tag);
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180
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181 static DcmElement* CreateElementForTag(const DicomTag& tag);
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182
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183 static void FillElementWithString(DcmElement& element,
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184 const DicomTag& tag,
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185 const std::string& utf8alue, // Encoded using UTF-8
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186 bool decodeDataUriScheme,
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187 Encoding dicomEncoding);
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188
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189 static DcmElement* FromJson(const DicomTag& tag,
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190 const Json::Value& element, // Encoded using UTF-8
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191 bool decodeDataUriScheme,
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192 Encoding dicomEncoding);
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193
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194 static DcmPixelSequence* GetPixelSequence(DcmDataset& dataset);
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195
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196 static Encoding ExtractEncoding(const Json::Value& json,
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197 Encoding defaultEncoding);
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198
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199 static DcmDataset* FromJson(const Json::Value& json, // Encoded using UTF-8
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200 bool generateIdentifiers,
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201 bool decodeDataUriScheme,
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202 Encoding defaultEncoding);
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203
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204 static DcmFileFormat* LoadFromMemoryBuffer(const void* buffer,
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205 size_t size);
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206
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207 static void FromJson(DicomMap& values,
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208 const Json::Value& result);
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209 };
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210 }