Mercurial > hg > orthanc

annotate OrthancServer/FromDcmtkBridge.h @ 2244:a3a65de1840f

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
shared copyright with osimis
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 04 Jan 2017 12:09:40 +0100
parents 3dd44baebc36
children 96b3ec054b69
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
62
a70bb32802ae renaming Server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
2 * Orthanc - A Lightweight, RESTful DICOM Store
1900
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1831
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288
6e7e5ed91c2d upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
4 * Department, University Hospital of Liege, Belgium
2244
a3a65de1840f shared copyright with osimis
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2232
diff changeset
5 * Copyright (C) 2017 Osimis, Belgium
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
6 *
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 * This program is free software: you can redistribute it and/or
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
8 * modify it under the terms of the GNU General Public License as
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 * published by the Free Software Foundation, either version 3 of the
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 * License, or (at your option) any later version.
136
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
11 *
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
12 * In addition, as a special exception, the copyright holders of this
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
13 * program give permission to link the code of its release with the
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
15 * that use the same license as the "OpenSSL" library), and distribute
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
16 * the linked executables. You must obey the GNU General Public License
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
17 * in all respects for all of the code used other than "OpenSSL". If you
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
18 * modify file(s) with this exception, you may extend this exception to
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
19 * your version of the file(s), but you are not obligated to do so. If
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
20 * you do not wish to do so, delete this exception statement from your
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
21 * version. If you delete this exception statement from all source files
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
22 * in the program, then also delete it here.
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23 *
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24 * This program is distributed in the hope that it will be useful, but
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25 * WITHOUT ANY WARRANTY; without even the implied warranty of
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
27 * General Public License for more details.
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 *
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29 * You should have received a copy of the GNU General Public License
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31 **/
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
33
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34 #pragma once
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35
789
55dae8c5a6ab refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 788
diff changeset
36 #include "ServerEnumerations.h"
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 176
diff changeset
37
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
38 #include "../Core/DicomFormat/DicomElement.h"
791
381f90e2b69d refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 790
diff changeset
39 #include "../Core/DicomFormat/DicomMap.h"
381f90e2b69d refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 790
diff changeset
40
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
41 #include <dcmtk/dcmdata/dcdatset.h>
1831
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1818
diff changeset
42 #include <dcmtk/dcmdata/dcmetinf.h>
1924
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
43 #include <dcmtk/dcmdata/dcpixseq.h>
1935
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
44 #include <dcmtk/dcmdata/dcfilefo.h>
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
45 #include <json/json.h>
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
46
2232
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
47 #if !defined(ORTHANC_BUILD_UNIT_TESTS)
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
48 # error The macro ORTHANC_BUILD_UNIT_TESTS must be defined
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
49 #endif
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
50
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
51 #if !defined(ORTHANC_ENABLE_LUA)
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
52 # error The macro ORTHANC_ENABLE_LUA must be defined
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
53 #endif
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
54
2126
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
55 #if ORTHANC_BUILD_UNIT_TESTS == 1
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
56 # include <gtest/gtest_prod.h>
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
57 #endif
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
58
2232
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
59 #if ORTHANC_ENABLE_LUA == 1
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
60 # include "../Core/Lua/LuaFunctionCall.h"
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
61 #endif
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
62
2126
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
63
62
a70bb32802ae renaming Server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
64 namespace Orthanc
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
65 {
2125
b9bd52c72ba2 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
66 class FromDcmtkBridge : public boost::noncopyable
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
67 {
2126
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
68 #if ORTHANC_BUILD_UNIT_TESTS == 1
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
69 FRIEND_TEST(FromDcmtkBridge, FromJson);
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
70 #endif
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
71
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
72 friend class ParsedDicomFile;
2131
bb199bccdc45 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2128
diff changeset
73 friend class Configuration;
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
74
2125
b9bd52c72ba2 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
75 private:
b9bd52c72ba2 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
76 FromDcmtkBridge(); // Pure static class
b9bd52c72ba2 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
77
b9bd52c72ba2 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
78 static void ExtractDicomSummary(DicomMap& target,
b9bd52c72ba2 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
79 DcmItem& dataset,
b9bd52c72ba2 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
80 unsigned int maxStringLength,
b9bd52c72ba2 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
81 Encoding defaultEncoding);
b9bd52c72ba2 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
82
2126
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
83 static void DatasetToJson(Json::Value& parent,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
84 DcmItem& item,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
85 DicomToJsonFormat format,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
86 DicomToJsonFlags flags,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
87 unsigned int maxStringLength,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
88 Encoding encoding);
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
89
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
90 static void ElementToJson(Json::Value& parent,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
91 DcmElement& element,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
92 DicomToJsonFormat format,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
93 DicomToJsonFlags flags,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
94 unsigned int maxStringLength,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
95 Encoding dicomEncoding);
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
96
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
97 static void ExtractDicomAsJson(Json::Value& target,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
98 DcmDataset& dataset,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
99 DicomToJsonFormat format,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
100 DicomToJsonFlags flags,
2131
bb199bccdc45 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2128
diff changeset
101 unsigned int maxStringLength,
bb199bccdc45 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2128
diff changeset
102 Encoding defaultEncoding);
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
103
2207
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2151
diff changeset
104 static void ChangeStringEncoding(DcmItem& dataset,
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2151
diff changeset
105 Encoding source,
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2151
diff changeset
106 Encoding target);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2151
diff changeset
107
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
108 public:
2151
8cbb55089a1d New configuration option: "LoadPrivateDictionary"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2131
diff changeset
109 static void InitializeDictionary(bool loadPrivateDictionary);
1656
d3ba98d6b6e9 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1655
diff changeset
110
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
111 static void RegisterDictionaryTag(const DicomTag& tag,
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
112 ValueRepresentation vr,
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
113 const std::string& name,
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
114 unsigned int minMultiplicity,
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
115 unsigned int maxMultiplicity,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
116 const std::string& privateCreator);
1657
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1656
diff changeset
117
1936
dba0db0a94b4 generalization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1935
diff changeset
118 static Encoding DetectEncoding(DcmItem& dataset,
1928
84c7eaeb5244 Configuration::GetDefaultEncoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1924
diff changeset
119 Encoding defaultEncoding);
956
2fd5a163776d primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 874
diff changeset
120
991
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 956
diff changeset
121 static DicomTag Convert(const DcmTag& tag);
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 956
diff changeset
122
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
123 static DicomTag GetTag(const DcmElement& element);
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
124
1655
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1417
diff changeset
125 static bool IsUnknownTag(const DicomTag& tag);
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1417
diff changeset
126
956
2fd5a163776d primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 874
diff changeset
127 static DicomValue* ConvertLeafElement(DcmElement& element,
1736
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
128 DicomToJsonFlags flags,
1929
cda5b0ab4ce5 ORTHANC_MAXIMUM_TAG_LENGTH made explicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1928
diff changeset
129 unsigned int maxStringLength,
956
2fd5a163776d primitives for proper encoding handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 874
diff changeset
130 Encoding encoding);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
131
2126
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
132 static void ExtractHeaderAsJson(Json::Value& target,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
133 DcmMetaInfo& header,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
134 DicomToJsonFormat format,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
135 DicomToJsonFlags flags,
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2125
diff changeset
136 unsigned int maxStringLength);
1831
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1818
diff changeset
137
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
138 static std::string GetTagName(const DicomTag& tag,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
139 const std::string& privateCreator);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
140
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
141 static std::string GetTagName(const DcmElement& element);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
142
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
143 static std::string GetTagName(const DicomElement& element)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
144 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
145 return GetTagName(element.GetTag(), "");
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
146 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
147
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 302
diff changeset
148 static DicomTag ParseTag(const char* name);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
149
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 302
diff changeset
150 static DicomTag ParseTag(const std::string& name)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
151 {
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 302
diff changeset
152 return ParseTag(name.c_str());
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
153 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
154
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
155 static bool HasTag(const DicomMap& fields,
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
156 const std::string& tagName)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
157 {
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 302
diff changeset
158 return fields.HasTag(ParseTag(tagName));
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
159 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
160
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
161 static const DicomValue& GetValue(const DicomMap& fields,
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
162 const std::string& tagName)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
163 {
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 302
diff changeset
164 return fields.GetValue(ParseTag(tagName));
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
165 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
166
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
167 static void SetValue(DicomMap& target,
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
168 const std::string& tagName,
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
169 DicomValue* value)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
170 {
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 302
diff changeset
171 target.SetValue(ParseTag(tagName), value);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
172 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
173
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
174 static void ToJson(Json::Value& result,
1368
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1360
diff changeset
175 const DicomMap& values,
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1360
diff changeset
176 bool simplify);
176
81f11fb357f2 uid generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
177
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 784
diff changeset
178 static std::string GenerateUniqueIdentifier(ResourceType level);
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
179
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
180 static bool SaveToMemoryBuffer(std::string& buffer,
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
181 DcmDataset& dataSet);
1360
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
182
2006
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
183 static ValueRepresentation Convert(DcmEVR vr);
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
184
6301bbcbcaed more generic support of value representations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1998
diff changeset
185 static ValueRepresentation LookupValueRepresentation(const DicomTag& tag);
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
186
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
187 static DcmElement* CreateElementForTag(const DicomTag& tag);
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
188
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
189 static void FillElementWithString(DcmElement& element,
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
190 const DicomTag& tag,
1695
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1694
diff changeset
191 const std::string& utf8alue, // Encoded using UTF-8
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1765
diff changeset
192 bool decodeDataUriScheme,
1695
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1694
diff changeset
193 Encoding dicomEncoding);
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1686
diff changeset
194
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1690
diff changeset
195 static DcmElement* FromJson(const DicomTag& tag,
1934
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
196 const Json::Value& element, // Encoded using UTF-8
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1765
diff changeset
197 bool decodeDataUriScheme,
1695
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1694
diff changeset
198 Encoding dicomEncoding);
1765
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1737
diff changeset
199
1924
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
200 static DcmPixelSequence* GetPixelSequence(DcmDataset& dataset);
1934
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
201
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
202 static Encoding ExtractEncoding(const Json::Value& json,
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
203 Encoding defaultEncoding);
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
204
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
205 static DcmDataset* FromJson(const Json::Value& json, // Encoded using UTF-8
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
206 bool generateIdentifiers,
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
207 bool decodeDataUriScheme,
72a2fd7fed8b FromDcmtkBridge::FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1929
diff changeset
208 Encoding defaultEncoding);
1935
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
209
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
210 static DcmFileFormat* LoadFromMemoryBuffer(const void* buffer,
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
211 size_t size);
1998
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1936
diff changeset
212
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1936
diff changeset
213 static void FromJson(DicomMap& values,
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1936
diff changeset
214 const Json::Value& result);
2209
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2207
diff changeset
215
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2207
diff changeset
216 static bool LookupTransferSyntax(std::string& result,
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2207
diff changeset
217 DcmFileFormat& dicom);
2218
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
218
2232
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
219 #if ORTHANC_ENABLE_LUA == 1
2218
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
220 static void ExecuteToDicom(DicomMap& target,
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
221 LuaFunctionCall& call);
2232
3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2218
diff changeset
222 #endif
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
223 };
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
224 }