annotate Sources/Plugin.cpp @ 68:054e36474998 OrthancSTL-1.2

OrthancSTL-1.2
author Sebastien Jodogne <s.jodogne@gmail.com>
date Sun, 16 Jun 2024 21:12:22 +0200
parents 5e11f5880e6d
children a5c1be2ec26a
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1 /**
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2 * SPDX-FileCopyrightText: 2023-2024 Sebastien Jodogne, UCLouvain, Belgium
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3 * SPDX-License-Identifier: GPL-3.0-or-later
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4 */
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6 /**
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7 * STL plugin for Orthanc
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8 * Copyright (C) 2023-2024 Sebastien Jodogne, UCLouvain, Belgium
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9 *
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10 * This program is free software: you can redistribute it and/or
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11 * modify it under the terms of the GNU General Public License as
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12 * published by the Free Software Foundation, either version 3 of the
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13 * License, or (at your option) any later version.
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14 *
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15 * This program is distributed in the hope that it will be useful, but
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16 * WITHOUT ANY WARRANTY; without even the implied warranty of
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17 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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18 * General Public License for more details.
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19 *
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20 * You should have received a copy of the GNU General Public License
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21 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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22 **/
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25 #if !defined(ORTHANC_ENABLE_NEXUS)
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26 # error Macro ORTHANC_ENABLE_NEXUS must be defined
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27 #endif
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29 #if !defined(ORTHANC_ENABLE_3DHOP)
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30 # error Macro ORTHANC_ENABLE_3DHOP must be defined
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31 #endif
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33 #include "StructureSetGeometry.h"
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34 #include "STLToolbox.h"
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35 #include "VTKToolbox.h"
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37 #include <EmbeddedResources.h>
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39 #include "../Resources/Orthanc/Plugins/OrthancPluginCppWrapper.h"
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41 #include <DicomParsing/FromDcmtkBridge.h>
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42 #include <Images/ImageProcessing.h>
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43 #include <Logging.h>
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44 #include <SerializationToolbox.h>
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45 #include <SystemToolbox.h>
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47 #include <vtkNew.h>
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48
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49 #include <boost/algorithm/string.hpp>
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50 #include <boost/thread/shared_mutex.hpp>
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53 #if ORTHANC_ENABLE_NEXUS == 1
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54 # include <Cache/MemoryStringCache.h>
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55 #endif
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56
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57 #define ORTHANC_PLUGIN_NAME "stl"
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60 #if ORTHANC_ENABLE_NEXUS == 1
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61 static const char* const ORTHANC_STL_PRIVATE_CREATOR = "OrthancSTL";
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62 static const char* const ORTHANC_STL_MANUFACTURER = "ORTHANC^STL";
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63 static const uint16_t ORTHANC_STL_PRIVATE_GROUP = 0x4205u;
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64 static const uint16_t ORTHANC_STL_CREATOR_ELEMENT = 0x0010u;
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65 static const uint16_t ORTHANC_STL_NEXUS_ELEMENT = 0x1001u;
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66 static const Orthanc::DicomTag DICOM_TAG_CREATOR_VERSION_UID(0x0008, 0x9123);
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68 /**
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69 * Each version of the STL plugin must provide a different value for
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70 * the CreatorVersionUID (0008,9123) tag. A new UID can be generated
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71 * by typing:
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72 *
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73 * $ python -c 'import pydicom; print(pydicom.uid.generate_uid())'
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74 *
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75 **/
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76 static const char* const ORTHANC_STL_CREATOR_VERSION_UID_MAINLINE = "1.2.826.0.1.3680043.8.498.90514926286349109728701975613711986292";
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77 static const char* const ORTHANC_STL_CREATOR_VERSION_UID_1_1 = "1.2.826.0.1.3680043.8.498.13468660186379895313063577332103681503";
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78 static const char* const ORTHANC_STL_CREATOR_VERSION_UID_1_2 = "1.2.826.0.1.3680043.8.498.69380801008493335183088431949117714013";
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79
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80 static const char* const GetCreatorVersionUid(const std::string& version)
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81 {
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82 if (version == "mainline")
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83 {
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84 return ORTHANC_STL_CREATOR_VERSION_UID_MAINLINE;
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85 }
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86 else if (version == "1.1")
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87 {
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88 return ORTHANC_STL_CREATOR_VERSION_UID_1_1;
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89 }
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90 else if (version == "1.2")
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91 {
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92 return ORTHANC_STL_CREATOR_VERSION_UID_1_2;
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93 }
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94 else
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95 {
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96 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
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97 }
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98 }
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99
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100 static void FillOrthancExplorerCreatorVersionUid(std::map<std::string, std::string>& dictionary)
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101 {
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102 dictionary["ORTHANC_STL_CREATOR_VERSION_UID_MAINLINE"] = ORTHANC_STL_CREATOR_VERSION_UID_MAINLINE;
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103 dictionary["ORTHANC_STL_CREATOR_VERSION_UID_1_1"] = ORTHANC_STL_CREATOR_VERSION_UID_1_1;
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104 dictionary["ORTHANC_STL_CREATOR_VERSION_UID_1_2"] = ORTHANC_STL_CREATOR_VERSION_UID_1_2;
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105 }
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106
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107 #endif
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108
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109
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110 // Forward declaration
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111 void ReadStaticAsset(std::string& target,
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112 const std::string& path);
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113
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114
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115 /**
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116 * As the static assets are gzipped by the "EmbedStaticAssets.py"
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117 * script, we use a cache to maintain the uncompressed assets in order
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118 * to avoid multiple gzip decodings.
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119 **/
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120 class ResourcesCache : public boost::noncopyable
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121 {
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122 private:
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123 typedef std::map<std::string, std::string*> Content;
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124
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125 boost::shared_mutex mutex_;
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126 Content content_;
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127
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128 public:
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129 ~ResourcesCache()
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130 {
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131 for (Content::iterator it = content_.begin(); it != content_.end(); ++it)
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132 {
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133 assert(it->second != NULL);
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134 delete it->second;
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135 }
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136 }
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137
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138 void Answer(OrthancPluginRestOutput* output,
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139 const std::string& path)
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140 {
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141 const std::string mime = Orthanc::EnumerationToString(Orthanc::SystemToolbox::AutodetectMimeType(path));
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142
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143 {
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144 // Check whether the cache already contains the resource
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145 boost::shared_lock<boost::shared_mutex> lock(mutex_);
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146
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147 Content::const_iterator found = content_.find(path);
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148
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149 if (found != content_.end())
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150 {
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151 assert(found->second != NULL);
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152 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, found->second->c_str(), found->second->size(), mime.c_str());
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153 return;
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154 }
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155 }
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156
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157 // This resource has not been cached yet
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158
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159 std::unique_ptr<std::string> item(new std::string);
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160 ReadStaticAsset(*item, path);
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161 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, item->c_str(), item->size(), mime.c_str());
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162
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163 {
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164 // Store the resource into the cache
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165 boost::unique_lock<boost::shared_mutex> lock(mutex_);
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166
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167 if (content_.find(path) == content_.end())
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168 {
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169 content_[path] = item.release();
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170 }
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171 }
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172 }
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173 };
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174
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175
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176 static ResourcesCache cache_;
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177
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178 void ServeFile(OrthancPluginRestOutput* output,
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179 const char* url,
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180 const OrthancPluginHttpRequest* request)
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181 {
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182 if (request->method != OrthancPluginHttpMethod_Get)
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183 {
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184 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "GET");
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185 return;
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186 }
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187
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188 const std::string file = request->groups[0];
0
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189
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190 if (boost::starts_with(file, "basic-viewer/") ||
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191 boost::starts_with(file, "o3dv/"))
0
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192 {
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193 cache_.Answer(output, file);
0
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194 }
38
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195 else
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196 {
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197 Orthanc::EmbeddedResources::FileResourceId resourceId;
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198 Orthanc::MimeType mimeType;
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199
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200 if (file == "three.html")
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201 {
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202 resourceId = Orthanc::EmbeddedResources::THREE_HTML;
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203 mimeType = Orthanc::MimeType_Html;
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204 }
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205 else if (file == "three.js")
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206 {
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207 resourceId = Orthanc::EmbeddedResources::THREE_JS;
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208 mimeType = Orthanc::MimeType_JavaScript;
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209 }
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210 else if (file == "o3dv.html")
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211 {
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212 resourceId = Orthanc::EmbeddedResources::O3DV_HTML;
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213 mimeType = Orthanc::MimeType_Html;
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diff changeset
214 }
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diff changeset
215 else if (file == "o3dv.js")
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diff changeset
216 {
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217 resourceId = Orthanc::EmbeddedResources::O3DV_JS;
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218 mimeType = Orthanc::MimeType_JavaScript;
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diff changeset
219 }
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diff changeset
220 else
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diff changeset
221 {
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diff changeset
222 OrthancPluginSendHttpStatusCode(OrthancPlugins::GetGlobalContext(), output, 404);
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diff changeset
223 return;
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diff changeset
224 }
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diff changeset
225
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226 std::string s;
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227 Orthanc::EmbeddedResources::GetFileResource(s, resourceId);
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diff changeset
228 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), Orthanc::EnumerationToString(mimeType));
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diff changeset
229 }
0
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diff changeset
230 }
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diff changeset
231
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diff changeset
232
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
233
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diff changeset
234
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diff changeset
235 #include <dcmtk/dcmdata/dcfilefo.h>
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236 #include <dcmtk/dcmdata/dcsequen.h>
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237 #include <dcmtk/dcmdata/dcuid.h>
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238
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diff changeset
239
40
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diff changeset
240 namespace
1
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diff changeset
241 {
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diff changeset
242 class XorFiller : public Orthanc::ImageProcessing::IPolygonFiller
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243 {
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244 private:
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diff changeset
245 Orthanc::ImageAccessor& target_;
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diff changeset
246
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247 public:
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248 explicit XorFiller(Orthanc::ImageAccessor& target) :
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249 target_(target)
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250 {
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251 }
1
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diff changeset
252
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253 virtual void Fill(int y,
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diff changeset
254 int x1,
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diff changeset
255 int x2) ORTHANC_OVERRIDE
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diff changeset
256 {
40
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diff changeset
257 assert(x1 <= x2);
1
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diff changeset
258
40
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diff changeset
259 if (y >= 0 &&
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diff changeset
260 y < static_cast<int>(target_.GetHeight()))
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diff changeset
261 {
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diff changeset
262 x1 = std::max(x1, 0);
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diff changeset
263 x2 = std::min(x2, static_cast<int>(target_.GetWidth()) - 1);
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parents: 0
diff changeset
264
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diff changeset
265 uint8_t* p = reinterpret_cast<uint8_t*>(target_.GetRow(y)) + x1;
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diff changeset
266
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diff changeset
267 for (int i = x1; i <= x2; i++, p++)
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diff changeset
268 {
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diff changeset
269 *p = (*p ^ 0xff);
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diff changeset
270 }
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diff changeset
271 }
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diff changeset
272 }
40
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diff changeset
273 };
8a1daa321afe cppcheck
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274 }
1
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parents: 0
diff changeset
275
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276
29
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277 static Orthanc::ParsedDicomFile* LoadInstance(const std::string& instanceId)
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278 {
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279 std::string dicom;
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280
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diff changeset
281 if (!OrthancPlugins::RestApiGetString(dicom, "/instances/" + instanceId + "/file", false))
62abf3c523f9 big endian support, retrieve axes from referenced volume
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282 {
62abf3c523f9 big endian support, retrieve axes from referenced volume
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283 throw Orthanc::OrthancException(Orthanc::ErrorCode_UnknownResource);
62abf3c523f9 big endian support, retrieve axes from referenced volume
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284 }
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285 else
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286 {
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287 return new Orthanc::ParsedDicomFile(dicom);
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288 }
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289 }
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parents: 28
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290
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291
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diff changeset
292 static void GetReferencedVolumeAxes(Vector3D& axisX,
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293 Vector3D& axisY,
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294 const StructureSet& structureSet)
1
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295 {
29
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296 // This is a rough guess for the X/Y axes
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297 axisX = Vector3D(1, 0, 0);
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298 axisY = Vector3D(0, 1, 0);
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299
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300 // Look for one instance from the referenced volume
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301 const std::string& sopInstanceUid = structureSet.GetPolygon(0).GetReferencedSopInstanceUid();
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302
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303 Json::Value response;
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304 if (OrthancPlugins::RestApiPost(response, "/tools/lookup", sopInstanceUid, false))
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305 {
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306 if (response.type() != Json::arrayValue)
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307 {
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308 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol);
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309 }
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310
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311 bool first = true;
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312
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313 for (Json::Value::ArrayIndex i = 0; i < response.size(); i++)
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314 {
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315 if (response[i].type() != Json::objectValue)
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316 {
62abf3c523f9 big endian support, retrieve axes from referenced volume
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317 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol);
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318 }
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diff changeset
319
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320 if (Orthanc::SerializationToolbox::ReadString(response[i], "Type") == "Instance")
62abf3c523f9 big endian support, retrieve axes from referenced volume
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diff changeset
321 {
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diff changeset
322 if (first)
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323 {
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324 const std::string& instanceId = Orthanc::SerializationToolbox::ReadString(response[i], "ID");
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325 std::unique_ptr<Orthanc::ParsedDicomFile> reference(LoadInstance(instanceId));
62abf3c523f9 big endian support, retrieve axes from referenced volume
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diff changeset
326
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327 std::string imageOrientation;
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diff changeset
328 if (reference->GetTagValue(imageOrientation, Orthanc::DICOM_TAG_IMAGE_ORIENTATION_PATIENT))
62abf3c523f9 big endian support, retrieve axes from referenced volume
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diff changeset
329 {
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330 std::vector<std::string> items;
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331 Orthanc::Toolbox::TokenizeString(items, imageOrientation, '\\');
62abf3c523f9 big endian support, retrieve axes from referenced volume
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diff changeset
332
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diff changeset
333 double x1, x2, x3, y1, y2, y3;
62abf3c523f9 big endian support, retrieve axes from referenced volume
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diff changeset
334
62abf3c523f9 big endian support, retrieve axes from referenced volume
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diff changeset
335 if (items.size() == 6 &&
33
2460b376d3f7 reorganization
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diff changeset
336 STLToolbox::MyParseDouble(x1, items[0]) &&
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diff changeset
337 STLToolbox::MyParseDouble(x2, items[1]) &&
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diff changeset
338 STLToolbox::MyParseDouble(x3, items[2]) &&
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diff changeset
339 STLToolbox::MyParseDouble(y1, items[3]) &&
2460b376d3f7 reorganization
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diff changeset
340 STLToolbox::MyParseDouble(y2, items[4]) &&
2460b376d3f7 reorganization
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diff changeset
341 STLToolbox::MyParseDouble(y3, items[5]))
29
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342 {
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343 axisX = Vector3D(x1, x2, x3);
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344 axisY = Vector3D(y1, y2, y3);
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diff changeset
345 }
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diff changeset
346 }
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diff changeset
347 }
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diff changeset
348 else
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diff changeset
349 {
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diff changeset
350 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError,
62abf3c523f9 big endian support, retrieve axes from referenced volume
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diff changeset
351 "Multiple instances with the same SOP Instance UID");
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diff changeset
352 }
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parents: 28
diff changeset
353 }
62abf3c523f9 big endian support, retrieve axes from referenced volume
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parents: 28
diff changeset
354 }
62abf3c523f9 big endian support, retrieve axes from referenced volume
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parents: 28
diff changeset
355 }
62abf3c523f9 big endian support, retrieve axes from referenced volume
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parents: 28
diff changeset
356 }
62abf3c523f9 big endian support, retrieve axes from referenced volume
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parents: 28
diff changeset
357
62abf3c523f9 big endian support, retrieve axes from referenced volume
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parents: 28
diff changeset
358
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diff changeset
359 static bool EncodeStructureSetMesh(std::string& stl,
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diff changeset
360 const StructureSet& structureSet,
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diff changeset
361 const StructureSetGeometry& geometry,
62abf3c523f9 big endian support, retrieve axes from referenced volume
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diff changeset
362 const std::set<std::string>& roiNames,
62abf3c523f9 big endian support, retrieve axes from referenced volume
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diff changeset
363 unsigned int resolution,
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
364 bool smooth)
62abf3c523f9 big endian support, retrieve axes from referenced volume
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parents: 28
diff changeset
365 {
62abf3c523f9 big endian support, retrieve axes from referenced volume
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parents: 28
diff changeset
366 if (resolution < 1 ||
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
367 structureSet.GetPolygonsCount() < 1)
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
368 {
0f03a8a0bd6f encoding of RT-STRUCT as STL
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diff changeset
369 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
370 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
371
33
2460b376d3f7 reorganization
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parents: 32
diff changeset
372 if (!STLToolbox::IsNear(1, geometry.GetSlicesNormal().ComputeNorm()))
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
373 {
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
374 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
375 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
376
29
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
377 Vector3D axisX, axisY;
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
378 GetReferencedVolumeAxes(axisX, axisY, structureSet);
62abf3c523f9 big endian support, retrieve axes from referenced volume
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parents: 28
diff changeset
379
62abf3c523f9 big endian support, retrieve axes from referenced volume
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parents: 28
diff changeset
380 Vector3D axisZ = Vector3D::CrossProduct(axisX, axisY);
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
381
33
2460b376d3f7 reorganization
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parents: 32
diff changeset
382 if (!STLToolbox::IsNear(1, axisX.ComputeNorm()) ||
2460b376d3f7 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 32
diff changeset
383 !STLToolbox::IsNear(1, axisY.ComputeNorm()) ||
29
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
384 !Vector3D::AreParallel(axisZ, geometry.GetSlicesNormal()))
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
385 {
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
386 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
387 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
388
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
389 Extent2D extent;
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
390 for (size_t i = 0; i < structureSet.GetPolygonsCount(); i++)
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
391 {
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
392 structureSet.GetPolygon(i).Add(extent, axisX, axisY);
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
393 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
394
28
410003c50b17 improved computation of RT-STRUCT geometry
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parents: 25
diff changeset
395 const int depth = geometry.GetSlicesCount();
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
396
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
397 vtkNew<vtkImageData> volume;
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
398 volume->SetDimensions(resolution, resolution, depth);
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
399 volume->AllocateScalars(VTK_UNSIGNED_CHAR, 1);
0f03a8a0bd6f encoding of RT-STRUCT as STL
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parents: 0
diff changeset
400
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
401 assert(sizeof(unsigned char) == 1);
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
402 memset(volume->GetScalarPointer(), 0, resolution * resolution * depth);
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
403
30
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
404 const double pixelSpacingX = extent.GetWidth() / static_cast<double>(resolution);
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
405 const double pixelSpacingY = extent.GetHeight() / static_cast<double>(resolution);
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
406 const double pixelSpacingZ = geometry.GetSlicesSpacing();
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
407
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
408 bool first = true;
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
409
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
410 for (size_t i = 0; i < structureSet.GetPolygonsCount(); i++)
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
411 {
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
412 const StructurePolygon& polygon = structureSet.GetPolygon(i);
29
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
413 if (roiNames.find(polygon.GetRoiName()) != roiNames.end())
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
414 {
29
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
415 // This polygon corresponds to a ROI of interest
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
416
29
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
417 size_t z;
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
418 if (geometry.LookupSliceIndex(z, polygon))
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
419 {
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
420 std::vector<Orthanc::ImageProcessing::ImagePoint> points;
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
421 points.reserve(polygon.GetPointsCount());
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
422
29
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
423 for (size_t j = 0; j < polygon.GetPointsCount(); j++)
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
424 {
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
425 const Vector3D& point = polygon.GetPoint(j);
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
426 double x = (Vector3D::DotProduct(point, axisX) - extent.GetMinX()) / extent.GetWidth() * static_cast<double>(resolution);
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
427 double y = (Vector3D::DotProduct(point, axisY) - extent.GetMinY()) / extent.GetHeight() * static_cast<double>(resolution);
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
428 points.push_back(Orthanc::ImageProcessing::ImagePoint(static_cast<int32_t>(std::floor(x)),
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
429 static_cast<int32_t>(std::floor(y))));
30
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
430
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
431 if (first)
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
432 {
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
433 first = false;
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
434 volume->SetOrigin(point.GetX() - x * pixelSpacingX,
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
435 point.GetY() - y * pixelSpacingY,
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
436 point.GetZ() - z * pixelSpacingZ);
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
437 }
29
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
438 }
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
439
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
440 Orthanc::ImageAccessor slice;
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
441 slice.AssignWritable(Orthanc::PixelFormat_Grayscale8, resolution, resolution, resolution /* pitch */,
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
442 reinterpret_cast<uint8_t*>(volume->GetScalarPointer()) + z * resolution * resolution);
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
443
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
444 XorFiller filler(slice);
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
445 Orthanc::ImageProcessing::FillPolygon(filler, points);
62abf3c523f9 big endian support, retrieve axes from referenced volume
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
446 }
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
447 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
448 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
449
30
3570c23764d4 set stl origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 29
diff changeset
450 volume->SetSpacing(pixelSpacingX, pixelSpacingY, pixelSpacingZ);
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
451
32
976da5476810 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 31
diff changeset
452 return VTKToolbox::EncodeVolume(stl, volume.Get(), resolution, smooth);
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
453 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
454
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
455
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
456 void ListStructures(OrthancPluginRestOutput* output,
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
457 const char* url,
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
458 const OrthancPluginHttpRequest* request)
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
459 {
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
460 if (request->method != OrthancPluginHttpMethod_Get)
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
461 {
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
462 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "GET");
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
463 return;
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
464 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
465
3
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
466 const std::string instanceId(request->groups[0]);
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
467
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
468 std::unique_ptr<Orthanc::ParsedDicomFile> dicom(LoadInstance(instanceId));
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
469
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
470 std::set<std::string> names;
33
2460b376d3f7 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 32
diff changeset
471 StructureSet::ListStructuresNames(names, *dicom);
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
472
3
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
473 Json::Value answer = Json::arrayValue;
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
474
3
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
475 for (std::set<std::string>::const_iterator it = names.begin(); it != names.end(); ++it)
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
476 {
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
477 answer.append(*it);
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
478 }
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
479
3
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
480 std::string s = answer.toStyledString();
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
481 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), Orthanc::MIME_JSON);
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
482 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
483
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
484
4
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
485 static void AddDefaultTagValue(Json::Value& target,
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
486 const Orthanc::DicomTag& tag,
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
487 const std::string& value)
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
488 {
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
489 if (!target.isMember(tag.Format()))
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
490 {
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
491 target[tag.Format()] = value;
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
492 }
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
493 }
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
494
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
495
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
496 static void AddDefaultTagValue(Json::Value& target,
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
497 const DcmTagKey& tag,
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
498 const std::string& value)
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
499 {
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
500 AddDefaultTagValue(target, Orthanc::DicomTag(tag.getGroup(), tag.getElement()), value);
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
501 }
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
502
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
503
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
504 static void CallCreateDicom(Json::Value& answer,
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
505 const std::string& stl,
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
506 const Json::Value& body,
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
507 const std::string& parentStudy,
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
508 const std::string& defaultSeriesDescription,
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
509 const std::string& defaultFrameOfReferenceUid,
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
510 const std::string& defaultTitle)
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
511 {
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
512 static const char* const KEY_TAGS = "Tags";
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
513
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
514 Json::Value normalized = Json::objectValue;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
515
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
516 if (body.isMember(KEY_TAGS))
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
517 {
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
518 const Json::Value& tags = body[KEY_TAGS];
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
519
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
520 if (tags.type() != Json::objectValue)
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
521 {
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
522 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest, "Tags must be provided as a JSON object");
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
523 }
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
524
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
525 std::vector<std::string> keys = tags.getMemberNames();
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
526 for (size_t i = 0; i < keys.size(); i++)
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
527 {
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
528 const Orthanc::DicomTag tag = Orthanc::FromDcmtkBridge::ParseTag(keys[i]);
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
529 normalized[tag.Format()] = tags[keys[i]];
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
530 }
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
531 }
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
532
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
533 if (!normalized.isMember(Orthanc::DICOM_TAG_SERIES_DESCRIPTION.Format()))
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
534 {
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
535 normalized[Orthanc::DICOM_TAG_SERIES_DESCRIPTION.Format()] = defaultSeriesDescription;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
536 }
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
537
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
538 AddDefaultTagValue(normalized, Orthanc::DICOM_TAG_SERIES_NUMBER, "1");
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
539 AddDefaultTagValue(normalized, Orthanc::DICOM_TAG_FRAME_OF_REFERENCE_UID, defaultFrameOfReferenceUid);
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
540 AddDefaultTagValue(normalized, Orthanc::DICOM_TAG_INSTANCE_NUMBER, "1");
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
541
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
542 AddDefaultTagValue(normalized, DCM_BurnedInAnnotation, "NO");
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
543 AddDefaultTagValue(normalized, DCM_DeviceSerialNumber, ORTHANC_STL_VERSION);
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
544 AddDefaultTagValue(normalized, DCM_DocumentTitle, defaultTitle);
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
545 AddDefaultTagValue(normalized, DCM_Manufacturer, "Orthanc STL plugin");
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
546 AddDefaultTagValue(normalized, DCM_ManufacturerModelName, "Orthanc STL plugin");
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
547 AddDefaultTagValue(normalized, DCM_PositionReferenceIndicator, "");
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
548 AddDefaultTagValue(normalized, DCM_SoftwareVersions, ORTHANC_STL_VERSION);
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
549 AddDefaultTagValue(normalized, DCM_ConceptNameCodeSequence, "");
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
550
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
551 std::string date, time;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
552 Orthanc::SystemToolbox::GetNowDicom(date, time, true /* use UTC time (not local time) */);
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
553 AddDefaultTagValue(normalized, DCM_AcquisitionDateTime, date + time);
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
554
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
555 const Orthanc::DicomTag MEASUREMENT_UNITS_CODE_SEQUENCE(DCM_MeasurementUnitsCodeSequence.getGroup(),
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
556 DCM_MeasurementUnitsCodeSequence.getElement());
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
557
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
558 if (!normalized.isMember(MEASUREMENT_UNITS_CODE_SEQUENCE.Format()))
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
559 {
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
560 Json::Value item;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
561 item["CodeValue"] = "mm";
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
562 item["CodingSchemeDesignator"] = "UCUM";
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
563 item["CodeMeaning"] = defaultTitle;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
564
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
565 normalized[MEASUREMENT_UNITS_CODE_SEQUENCE.Format()].append(item);
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
566 }
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
567
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
568 std::string content;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
569 Orthanc::Toolbox::EncodeDataUriScheme(content, Orthanc::MIME_STL, stl);
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
570
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
571 Json::Value create;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
572 create["Content"] = content;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
573 create["Parent"] = parentStudy;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
574 create["Tags"] = normalized;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
575
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
576 if (!OrthancPlugins::RestApiPost(answer, "/tools/create-dicom", create.toStyledString(), false))
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
577 {
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
578 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest, "Cannot create DICOM from STL");
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
579 }
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
580 }
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
581
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
582
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
583 void EncodeStructureSet(OrthancPluginRestOutput* output,
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
584 const char* url,
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
585 const OrthancPluginHttpRequest* request)
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
586 {
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
587 static const char* const KEY_INSTANCE = "Instance";
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
588 static const char* const KEY_RESOLUTION = "Resolution";
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
589 static const char* const KEY_ROI_NAMES = "RoiNames";
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
590 static const char* const KEY_SMOOTH = "Smooth";
28
410003c50b17 improved computation of RT-STRUCT geometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 25
diff changeset
591 static const char* const KEY_STRICT = "Strict";
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
592
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
593 if (request->method != OrthancPluginHttpMethod_Post)
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
594 {
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
595 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "POST");
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
596 return;
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
597 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
598
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
599 Json::Value body;
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
600 if (!Orthanc::Toolbox::ReadJson(body, request->body, request->bodySize))
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
601 {
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
602 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest);
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
603 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
604
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
605 const std::string instanceId = Orthanc::SerializationToolbox::ReadString(body, KEY_INSTANCE);
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
606 const bool smooth = (body.isMember(KEY_SMOOTH) ?
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
607 Orthanc::SerializationToolbox::ReadBoolean(body, KEY_SMOOTH) :
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
608 true /* smooth by default */);
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
609 const unsigned int resolution = (body.isMember(KEY_RESOLUTION) ?
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
610 Orthanc::SerializationToolbox::ReadUnsignedInteger(body, KEY_RESOLUTION) :
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
611 256 /* default value */);
28
410003c50b17 improved computation of RT-STRUCT geometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 25
diff changeset
612 const bool strict = (body.isMember(KEY_STRICT) ?
410003c50b17 improved computation of RT-STRUCT geometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 25
diff changeset
613 Orthanc::SerializationToolbox::ReadBoolean(body, KEY_STRICT) :
410003c50b17 improved computation of RT-STRUCT geometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 25
diff changeset
614 true /* strict by default */);
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
615
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
616 std::set<std::string> roiNames;
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
617 Orthanc::SerializationToolbox::ReadSetOfStrings(roiNames, body, KEY_ROI_NAMES);
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
618
3
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
619 std::unique_ptr<Orthanc::ParsedDicomFile> dicom(LoadInstance(instanceId));
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
620
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
621 StructureSet structureSet(*dicom);
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
622
28
410003c50b17 improved computation of RT-STRUCT geometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 25
diff changeset
623 StructureSetGeometry geometry(structureSet, strict);
410003c50b17 improved computation of RT-STRUCT geometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 25
diff changeset
624
3
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
625 std::string stl;
28
410003c50b17 improved computation of RT-STRUCT geometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 25
diff changeset
626 if (!EncodeStructureSetMesh(stl, structureSet, geometry, roiNames, resolution, smooth))
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
627 {
8
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
628 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat, "Cannot encode STL from RT-STRUCT");
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
629 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
630 else
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
631 {
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
632 std::string seriesDescription;
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
633
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
634 if (dicom->GetTagValue(seriesDescription, Orthanc::DICOM_TAG_SERIES_DESCRIPTION))
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
635 {
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
636 seriesDescription += ": ";
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
637 }
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
638 else
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
639 {
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
640 seriesDescription.clear();
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
641 }
4
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
642
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
643 bool first = true;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
644 for (std::set<std::string>::const_iterator it = roiNames.begin(); it != roiNames.end(); ++it)
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
645 {
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
646 if (first)
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
647 {
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
648 first = false;
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
649 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
650 else
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
651 {
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
652 seriesDescription += ", ";
3
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
653 }
2
2bdb9acb7dcf added STL viewer button at instance level too
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
654
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
655 seriesDescription += *it;
4
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
656 }
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
657
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
658 std::string frameOfReferenceUid;
4
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
659 if (structureSet.HasFrameOfReferenceUid())
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
660 {
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
661 frameOfReferenceUid = structureSet.GetFrameOfReferenceUid();
4
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
662 }
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
663 else
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
664 {
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
665 frameOfReferenceUid = Orthanc::FromDcmtkBridge::GenerateUniqueIdentifier(Orthanc::ResourceType_Instance);
3
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
666 }
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
667
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
668 Json::Value answer;
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
669 CallCreateDicom(answer, stl, body, structureSet.HashStudy(), seriesDescription,
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
670 frameOfReferenceUid, "STL model generated from DICOM RT-STRUCT");
4
5ee4448a8ff8 generated STL pass dciodvfy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
671
7
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
672 std::string s = answer.toStyledString();
e3e59de705f6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
673 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), Orthanc::MIME_JSON);
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
674 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
675 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
676
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
677
3
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
678 void ExtractStl(OrthancPluginRestOutput* output,
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
679 const char* url,
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
680 const OrthancPluginHttpRequest* request)
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
681 {
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
682 if (request->method != OrthancPluginHttpMethod_Get)
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
683 {
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
684 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "GET");
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
685 return;
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
686 }
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
687
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
688 const std::string instanceId(request->groups[0]);
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
689
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
690 std::unique_ptr<Orthanc::ParsedDicomFile> dicom(LoadInstance(instanceId));
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
691 DcmDataset& dataset = *dicom->GetDcmtkObject().getDataset();
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
692
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
693 std::string stl;
33
2460b376d3f7 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 32
diff changeset
694 if (STLToolbox::GetStringValue(dataset, DCM_MIMETypeOfEncapsulatedDocument) != Orthanc::MIME_STL ||
2460b376d3f7 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 32
diff changeset
695 STLToolbox::GetStringValue(dataset, DCM_SOPClassUID) != UID_EncapsulatedSTLStorage ||
3
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
696 !dicom->GetTagValue(stl, Orthanc::DICOM_TAG_ENCAPSULATED_DOCUMENT))
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
697 {
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
698 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest, "DICOM instance not encapsulating a STL model: " + instanceId);
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
699 }
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
700 else
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
701 {
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
702 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output,
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
703 stl.empty() ? NULL : stl.c_str(), stl.size(), Orthanc::MIME_STL);
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
704 }
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
705 }
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
706
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
707
6
c02d12eb34d4 added LoadNifti()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4
diff changeset
708
8
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
709 void EncodeNifti(OrthancPluginRestOutput* output,
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
710 const char* url,
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
711 const OrthancPluginHttpRequest* request)
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
712 {
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
713 static const char* const KEY_NIFTI = "Nifti";
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
714 static const char* const KEY_RESOLUTION = "Resolution";
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
715 static const char* const KEY_PARENT_STUDY = "ParentStudy";
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
716 static const char* const KEY_SMOOTH = "Smooth";
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
717
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
718 if (request->method != OrthancPluginHttpMethod_Post)
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
719 {
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
720 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "POST");
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
721 return;
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
722 }
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
723
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
724 Json::Value body;
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
725 if (!Orthanc::Toolbox::ReadJson(body, request->body, request->bodySize))
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
726 {
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
727 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest);
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
728 }
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
729
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
730 std::string mime, nifti;
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
731 if (!Orthanc::Toolbox::DecodeDataUriScheme(mime, nifti, Orthanc::SerializationToolbox::ReadString(body, KEY_NIFTI)))
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
732 {
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
733 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest, "Missing the \"Nifti\" argument containing the NIfTI file");
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
734 }
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
735
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
736 const std::string parentStudy = Orthanc::SerializationToolbox::ReadString(body, KEY_PARENT_STUDY);
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
737 const bool smooth = (body.isMember(KEY_SMOOTH) ?
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
738 Orthanc::SerializationToolbox::ReadBoolean(body, KEY_SMOOTH) :
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
739 true /* smooth by default */);
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
740 const unsigned int resolution = (body.isMember(KEY_RESOLUTION) ?
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
741 Orthanc::SerializationToolbox::ReadUnsignedInteger(body, KEY_RESOLUTION) :
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
742 256 /* default value */);
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
743
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
744 vtkNew<vtkImageData> volume;
32
976da5476810 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 31
diff changeset
745 VTKToolbox::LoadNifti(volume.Get(), nifti);
8
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
746
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
747 std::string stl;
32
976da5476810 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 31
diff changeset
748 if (!VTKToolbox::EncodeVolume(stl, volume.Get(), resolution, smooth))
8
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
749 {
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
750 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat, "Cannot encode STL from NIfTI");
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
751 }
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
752 else
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
753 {
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
754 const std::string title = "STL model generated from NIfTI";
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
755
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
756 const std::string frameOfReferenceUid = Orthanc::FromDcmtkBridge::GenerateUniqueIdentifier(Orthanc::ResourceType_Instance);
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
757
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
758 Json::Value answer;
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
759 CallCreateDicom(answer, stl, body, parentStudy, title, frameOfReferenceUid, title);
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
760
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
761 std::string s = answer.toStyledString();
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
762 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), Orthanc::MIME_JSON);
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
763 }
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
764 }
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
765
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
766
46
9b2a2fcc9878 added option to disable Nexus support
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
767 #if ORTHANC_ENABLE_NEXUS == 1
9b2a2fcc9878 added option to disable Nexus support
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
768
45
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
769 void ServeNexusAssets(OrthancPluginRestOutput* output,
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
770 const char* url,
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
771 const OrthancPluginHttpRequest* request)
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
772 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
773 if (request->method != OrthancPluginHttpMethod_Get)
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
774 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
775 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "GET");
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
776 return;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
777 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
778
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
779 const std::string file = request->groups[0];
64
5e11f5880e6d simplified the embedding of Nexus viewer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
780 cache_.Answer(output, "nexus/" + file);
45
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
781 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
782
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
783
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
784 static Orthanc::MemoryStringCache nexusCache_;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
785
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
786 void ExtractNexusModel(OrthancPluginRestOutput* output,
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
787 const char* url,
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
788 const OrthancPluginHttpRequest* request)
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
789 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
790 OrthancPluginContext* context = OrthancPlugins::GetGlobalContext();
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
791
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
792 if (request->method != OrthancPluginHttpMethod_Get)
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
793 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
794 OrthancPluginSendMethodNotAllowed(context, output, "GET");
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
795 return;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
796 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
797
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
798 const std::string instanceId = request->groups[0];
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
799
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
800 std::string range;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
801
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
802 for (uint32_t i = 0; i < request->headersCount; i++)
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
803 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
804 if (std::string(request->headersKeys[i]) == "range")
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
805 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
806 range = request->headersValues[i];
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
807 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
808 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
809
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
810 static const std::string BYTES = "bytes=";
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
811
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
812 if (!boost::starts_with(range, BYTES))
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
813 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
814 OrthancPluginSendHttpStatusCode(context, output, 416); // Range not satisfiable
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
815 return;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
816 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
817
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
818 std::vector<std::string> tokens;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
819 Orthanc::Toolbox::TokenizeString(tokens, range.substr(BYTES.length()), '-');
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
820
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
821 uint64_t start, end;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
822
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
823 if (tokens.size() != 2 ||
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
824 !Orthanc::SerializationToolbox::ParseUnsignedInteger64(start, tokens[0]) ||
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
825 !Orthanc::SerializationToolbox::ParseUnsignedInteger64(end, tokens[1]) ||
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
826 start < 0 ||
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
827 start > end)
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
828 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
829 OrthancPluginSendHttpStatusCode(context, output, 416); // Range not satisfiable
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
830 return;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
831 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
832
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
833 uint64_t modelSize;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
834 std::string part;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
835
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
836 #if 0
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
837 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
838 // Use no cache
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
839 std::string model;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
840 if (!OrthancPlugins::RestApiGetString(model, "/instances/" + instanceId + "/content/4205-1001", false))
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
841 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
842 OrthancPluginSendHttpStatusCode(context, output, 404);
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
843 return;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
844 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
845
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
846 modelSize = model.size();
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
847
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
848 if (end >= modelSize)
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
849 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
850 OrthancPluginSendHttpStatusCode(context, output, 416); // Range not satisfiable
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
851 return;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
852 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
853
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
854 part = model.substr(start, end - start + 1);
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
855 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
856 #else
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
857 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
858 Orthanc::MemoryStringCache::Accessor accessor(nexusCache_);
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
859
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
860 std::string model;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
861 if (!accessor.Fetch(model, instanceId))
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
862 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
863 if (OrthancPlugins::RestApiGetString(model, "/instances/" + instanceId + "/content/4205-1001", false))
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
864 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
865 accessor.Add(instanceId, model);
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
866 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
867 else
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
868 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
869 OrthancPluginSendHttpStatusCode(context, output, 404);
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
870 return;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
871 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
872 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
873
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
874 modelSize = model.size();
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
875
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
876 if (end >= modelSize)
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
877 {
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
878 OrthancPluginSendHttpStatusCode(context, output, 416); // Range not satisfiable
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
879 return;
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
880 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
881
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
882 part = model.substr(start, end - start + 1);
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
883 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
884 #endif
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
885
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
886 std::string s = ("bytes " + boost::lexical_cast<std::string>(start) + "-" +
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
887 boost::lexical_cast<std::string>(end) + "/" +
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
888 boost::lexical_cast<std::string>(modelSize));
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
889 OrthancPluginSetHttpHeader(context, output, "Content-Range", s.c_str());
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
890
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
891 s = boost::lexical_cast<std::string>(part.size());
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
892 OrthancPluginSetHttpHeader(context, output, "Content-Length", s.c_str());
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
893 OrthancPluginSetHttpHeader(context, output, "Content-Type", "application/octet-stream");
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
894
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
895 OrthancPluginSendHttpStatus(context, output, 206 /* partial content */, part.c_str(), part.size());
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
896 }
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
897
50
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
898
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
899 void DicomizeNexusModel(OrthancPluginRestOutput* output,
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
900 const char* url,
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
901 const OrthancPluginHttpRequest* request)
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
902 {
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
903 static const char* KEY_CONTENT = "Content";
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
904 static const char* KEY_PARENT = "Parent";
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
905 static const char* KEY_TAGS = "Tags";
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
906 static const char* KEY_PRIVATE_CREATOR = "PrivateCreator";
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
907
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
908 OrthancPluginContext* context = OrthancPlugins::GetGlobalContext();
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
909
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
910 if (request->method != OrthancPluginHttpMethod_Post)
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
911 {
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
912 OrthancPluginSendMethodNotAllowed(context, output, "POST");
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
913 return;
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
914 }
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
915
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
916 Json::Value body;
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
917 if (!Orthanc::Toolbox::ReadJson(body, request->body, request->bodySize) ||
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
918 body.type() != Json::objectValue ||
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
919 !body.isMember(KEY_TAGS) ||
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
920 body[KEY_TAGS].type() != Json::objectValue)
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
921 {
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
922 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest);
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
923 }
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
924
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
925 if (!body.isMember(KEY_CONTENT) ||
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
926 body[KEY_CONTENT].type() != Json::stringValue)
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
927 {
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
928 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest,
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
929 "POST body missing string field \"" + std::string(KEY_CONTENT) + "\"");
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
930 }
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
931
55
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
932 std::string decoded;
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
933 Orthanc::Toolbox::DecodeBase64(decoded, body[KEY_CONTENT].asString());
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
934
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
935 if (decoded.size() < 4 ||
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
936 decoded[0] != 0x20 ||
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
937 decoded[1] != 0x73 ||
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
938 decoded[2] != 0x78 ||
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
939 decoded[3] != 0x4e)
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
940 {
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
941 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat,
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
942 "This is not a valid Nexus file, its magic header is incorrect");
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
943 }
41e3b79e7f4b added check of Nexus magic header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
944
50
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
945 Json::Value creationBody = Json::objectValue;
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
946
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
947 creationBody[KEY_TAGS] = body[KEY_TAGS];
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
948 creationBody[KEY_TAGS][Orthanc::DICOM_TAG_MANUFACTURER.Format()] = ORTHANC_STL_MANUFACTURER;
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
949 creationBody[KEY_TAGS][Orthanc::DICOM_TAG_SOP_CLASS_UID.Format()] = "1.2.840.10008.5.1.4.1.1.66";
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
950 creationBody[KEY_TAGS][Orthanc::DICOM_TAG_MODALITY.Format()] = "OT";
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
951 creationBody[KEY_TAGS][DICOM_TAG_CREATOR_VERSION_UID.Format()] = GetCreatorVersionUid(ORTHANC_STL_VERSION);
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
952 creationBody[KEY_TAGS][Orthanc::DicomTag(ORTHANC_STL_PRIVATE_GROUP, ORTHANC_STL_CREATOR_ELEMENT).Format()] = ORTHANC_STL_PRIVATE_CREATOR;
51
40a093f90be6 optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
953 creationBody[KEY_TAGS][Orthanc::DicomTag(ORTHANC_STL_PRIVATE_GROUP, ORTHANC_STL_NEXUS_ELEMENT).Format()] =
40a093f90be6 optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
954 "data:application/octet-stream;base64," + body[KEY_CONTENT].asString();
50
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
955 creationBody[KEY_PRIVATE_CREATOR] = ORTHANC_STL_PRIVATE_CREATOR;
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
956
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
957 if (body.isMember(KEY_PARENT))
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
958 {
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
959 creationBody[KEY_PARENT] = body[KEY_PARENT];
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
960 }
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
961
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
962 std::string bodyString;
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
963 Orthanc::Toolbox::WriteFastJson(bodyString, creationBody);
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
964
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
965 std::string result;
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
966 if (OrthancPlugins::RestApiPost(result, "/tools/create-dicom",
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
967 bodyString.empty() ? NULL : bodyString.c_str(),
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
968 bodyString.size(), false))
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
969 {
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
970 OrthancPluginAnswerBuffer(context, output, result.empty() ? NULL : result.c_str(),
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
971 result.size(), "application/json");
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
972 }
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
973 else
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
974 {
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
975 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest);
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
976 }
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
977 }
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
978
46
9b2a2fcc9878 added option to disable Nexus support
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
979 #endif
9b2a2fcc9878 added option to disable Nexus support
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
980
45
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
981
62
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
982 #if ORTHANC_ENABLE_3DHOP == 1
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
983
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
984 void Serve3DHOPAssets(OrthancPluginRestOutput* output,
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
985 const char* url,
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
986 const OrthancPluginHttpRequest* request)
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
987 {
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
988 if (request->method != OrthancPluginHttpMethod_Get)
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
989 {
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
990 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "GET");
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
991 return;
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
992 }
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
993
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
994 const std::string file = request->groups[0];
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
995 cache_.Answer(output, "3dhop/" + file);
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
996 }
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
997
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
998 #endif
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
999
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1000
0
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1001 extern "C"
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1002 {
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1003 ORTHANC_PLUGINS_API int32_t OrthancPluginInitialize(OrthancPluginContext* context)
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1004 {
47
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
1005 OrthancPlugins::SetGlobalContext(context, ORTHANC_PLUGIN_NAME);
0
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1006
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1007 /* Check the version of the Orthanc core */
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1008 if (OrthancPluginCheckVersion(OrthancPlugins::GetGlobalContext()) == 0)
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1009 {
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1010 char info[1024];
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1011 sprintf(info, "Your version of Orthanc (%s) must be above %d.%d.%d to run this plugin",
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1012 OrthancPlugins::GetGlobalContext()->orthancVersion,
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1013 ORTHANC_PLUGINS_MINIMAL_MAJOR_NUMBER,
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1014 ORTHANC_PLUGINS_MINIMAL_MINOR_NUMBER,
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1015 ORTHANC_PLUGINS_MINIMAL_REVISION_NUMBER);
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1016 OrthancPluginLogError(OrthancPlugins::GetGlobalContext(), info);
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1017 return -1;
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1018 }
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1019
47
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
1020 #if ORTHANC_FRAMEWORK_VERSION_IS_ABOVE(1, 12, 4)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
1021 Orthanc::Logging::InitializePluginContext(context, ORTHANC_PLUGIN_NAME);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
1022 #elif ORTHANC_FRAMEWORK_VERSION_IS_ABOVE(1, 7, 2)
0
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1023 Orthanc::Logging::InitializePluginContext(context);
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1024 #else
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1025 Orthanc::Logging::Initialize(context);
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1026 #endif
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1027
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
1028 Orthanc::InitializeFramework("", false);
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
1029
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1030 const bool hasCreateDicomStl = OrthancPlugins::CheckMinimalOrthancVersion(1, 12, 1);
0
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1031
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1032 if (!hasCreateDicomStl)
0
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1033 {
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1034 LOG(WARNING) << "Your version of Orthanc (" << std::string(context->orthancVersion)
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1035 << ") is insufficient to create DICOM STL, it should be above 1.12.1";
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1036 }
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1037
25
5fc3ea6acbd5 fix deprecated calls
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 24
diff changeset
1038 OrthancPlugins::SetDescription(ORTHANC_PLUGIN_NAME, "STL plugin for Orthanc.");
0
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1039
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
1040 OrthancPlugins::RegisterRestCallback<ServeFile>("/stl/app/(.*)", true);
3
0fb06c6a6c87 added route "/instances/{id}/stl"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
1041 OrthancPlugins::RegisterRestCallback<ExtractStl>("/instances/([0-9a-f-]+)/stl", true);
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
1042 OrthancPlugins::RegisterRestCallback<ListStructures>("/stl/rt-struct/([0-9a-f-]+)", true);
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
1043
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1044 if (hasCreateDicomStl)
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
1045 {
8
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
1046 OrthancPlugins::RegisterRestCallback<EncodeStructureSet>("/stl/encode-rtstruct", true);
d1267c6c33e1 added route /stl/encode-nifti
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
1047 OrthancPlugins::RegisterRestCallback<EncodeNifti>("/stl/encode-nifti", true);
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
1048 }
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
1049
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1050 OrthancPlugins::OrthancConfiguration globalConfiguration;
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1051 OrthancPlugins::OrthancConfiguration configuration;
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1052 globalConfiguration.GetSection(configuration, "STL");
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1053
46
9b2a2fcc9878 added option to disable Nexus support
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1054 #if ORTHANC_ENABLE_NEXUS == 1
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1055 const bool enableNexus = configuration.GetBooleanValue("EnableNexus", false);
50
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
1056
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1057 if (enableNexus)
50
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
1058 {
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1059 LOG(INFO) << "Support for Nexus is enabled";
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1060 nexusCache_.SetMaximumSize(512 * 1024 * 1024); // Cache of 512MB for Nexus
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1061 OrthancPlugins::RegisterRestCallback<ExtractNexusModel>("/instances/([0-9a-f-]+)/nexus", true);
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1062 OrthancPlugins::RegisterRestCallback<ServeNexusAssets>("/stl/nexus/(.*)", true);
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1063
62
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1064 #if ORTHANC_ENABLE_3DHOP == 1
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1065 OrthancPlugins::RegisterRestCallback<Serve3DHOPAssets>("/stl/3dhop/(.*)", true);
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1066
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1067 /**
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1068 * The 3DHOP viewer only supports ".nxs", ".nxz", and ".ply" extensions,
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1069 * as can be seen in the "minimal/js/presenter.js" file. Furthermore, it
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1070 * requires the extension to be part of the URL.
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1071 **/
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1072 OrthancPlugins::RegisterRestCallback<ExtractNexusModel>("/stl/3dhop-instances/([0-9a-f-]+).nxz", true);
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1073 #endif
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1074
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1075 const bool hasCreateNexus_ = OrthancPlugins::CheckMinimalOrthancVersion(1, 9, 4);
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1076
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1077 if (hasCreateNexus_)
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1078 {
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1079 OrthancPlugins::RegisterRestCallback<DicomizeNexusModel>("/stl/create-nexus", true);
50
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
1080
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1081 if (OrthancPluginRegisterPrivateDictionaryTag(
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1082 context, ORTHANC_STL_PRIVATE_GROUP, ORTHANC_STL_CREATOR_ELEMENT, OrthancPluginValueRepresentation_LO,
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1083 "PrivateCreator", 1, 1, ORTHANC_STL_PRIVATE_CREATOR) != OrthancPluginErrorCode_Success ||
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1084 OrthancPluginRegisterPrivateDictionaryTag(
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1085 context, ORTHANC_STL_PRIVATE_GROUP, ORTHANC_STL_NEXUS_ELEMENT, OrthancPluginValueRepresentation_OB,
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1086 "NexusData", 1, 1, ORTHANC_STL_PRIVATE_CREATOR) != OrthancPluginErrorCode_Success)
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1087 {
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1088 LOG(ERROR) << "Cannot register the private DICOM tags for handling Nexus";
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1089 }
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1090 }
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1091 else
50
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
1092 {
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1093 LOG(WARNING) << "Your version of Orthanc (" << std::string(context->orthancVersion)
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1094 << ") is insufficient to create DICOM-ize Nexus models, it should be above 1.9.4";
50
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
1095 }
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
1096 }
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
1097 else
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
1098 {
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1099 LOG(INFO) << "Support for Nexus is disabled";
50
bf4c4e4e7198 added route /stl/create-nexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
1100 }
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1101 #else
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1102 const bool enableNexus = false;
46
9b2a2fcc9878 added option to disable Nexus support
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1103 #endif
45
967f947014ac adding experimental support for nexus models
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1104
2
2bdb9acb7dcf added STL viewer button at instance level too
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
1105 // Extend the default Orthanc Explorer with custom JavaScript for STL
2bdb9acb7dcf added STL viewer button at instance level too
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
1106 std::string explorer;
2bdb9acb7dcf added STL viewer button at instance level too
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
1107
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
1108 {
2bdb9acb7dcf added STL viewer button at instance level too
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
1109 Orthanc::EmbeddedResources::GetFileResource(explorer, Orthanc::EmbeddedResources::ORTHANC_EXPLORER);
2bdb9acb7dcf added STL viewer button at instance level too
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1110
2bdb9acb7dcf added STL viewer button at instance level too
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parents: 1
diff changeset
1111 std::map<std::string, std::string> dictionary;
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1112 dictionary["HAS_CREATE_DICOM_STL"] = (hasCreateDicomStl ? "true" : "false");
40
8a1daa321afe cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 38
diff changeset
1113 dictionary["SHOW_NIFTI_BUTTON"] = (configuration.GetBooleanValue("EnableNIfTI", false) ? "true" : "false");
52
f9e49dc63817 added configuration option STL.EnableNexus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
1114 dictionary["IS_NEXUS_ENABLED"] = (enableNexus ? "true" : "false");
62
b798387b085c added 3DHOP viewer version 4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
1115 dictionary["IS_3DHOP_ENABLED"] = ((ORTHANC_ENABLE_3DHOP == 1) ? "true" : "false");
53
83b1abee3ece improved handling of CreatorVersionUID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
1116 FillOrthancExplorerCreatorVersionUid(dictionary);
83b1abee3ece improved handling of CreatorVersionUID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
1117
2
2bdb9acb7dcf added STL viewer button at instance level too
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
1118 explorer = Orthanc::Toolbox::SubstituteVariables(explorer, dictionary);
2bdb9acb7dcf added STL viewer button at instance level too
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
1119
25
5fc3ea6acbd5 fix deprecated calls
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 24
diff changeset
1120 OrthancPlugins::ExtendOrthancExplorer(ORTHANC_PLUGIN_NAME, explorer);
2
2bdb9acb7dcf added STL viewer button at instance level too
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
1121 }
2bdb9acb7dcf added STL viewer button at instance level too
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
1122
0
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1123 return 0;
4e889a8e8be2 initial commit of the viewer plugin
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parents:
diff changeset
1124 }
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1125
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1126
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1127 ORTHANC_PLUGINS_API void OrthancPluginFinalize()
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1128 {
1
0f03a8a0bd6f encoding of RT-STRUCT as STL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 0
diff changeset
1129 Orthanc::FinalizeFramework();
0
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1130 }
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1131
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1132
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1133 ORTHANC_PLUGINS_API const char* OrthancPluginGetName()
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1134 {
25
5fc3ea6acbd5 fix deprecated calls
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parents: 24
diff changeset
1135 return ORTHANC_PLUGIN_NAME;
0
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1136 }
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1137
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1138
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1139 ORTHANC_PLUGINS_API const char* OrthancPluginGetVersion()
4e889a8e8be2 initial commit of the viewer plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1140 {
4e889a8e8be2 initial commit of the viewer plugin
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parents:
diff changeset
1141 return ORTHANC_STL_VERSION;
4e889a8e8be2 initial commit of the viewer plugin
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parents:
diff changeset
1142 }
4e889a8e8be2 initial commit of the viewer plugin
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parents:
diff changeset
1143 }