Mercurial > hg > orthanc
annotate OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h @ 4105:c02a2d9efbc2
move FromDcmtkBridge::ExecuteToDicom() to LuaFunctionCall, to remove dependency of DCMTK on Lua
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Mon, 06 Jul 2020 13:48:10 +0200 |
parents | d25f4c0fa160 |
children | bf7b9edf6b81 |
rev | line source |
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0 | 1 /** |
62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
0 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
8 * modify it under the terms of the GNU General Public License as | |
9 * published by the Free Software Foundation, either version 3 of the | |
10 * License, or (at your option) any later version. | |
136 | 11 * |
12 * In addition, as a special exception, the copyright holders of this | |
13 * program give permission to link the code of its release with the | |
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
15 * that use the same license as the "OpenSSL" library), and distribute | |
16 * the linked executables. You must obey the GNU General Public License | |
17 * in all respects for all of the code used other than "OpenSSL". If you | |
18 * modify file(s) with this exception, you may extend this exception to | |
19 * your version of the file(s), but you are not obligated to do so. If | |
20 * you do not wish to do so, delete this exception statement from your | |
21 * version. If you delete this exception statement from all source files | |
22 * in the program, then also delete it here. | |
0 | 23 * |
24 * This program is distributed in the hope that it will be useful, but | |
25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
27 * General Public License for more details. | |
28 * | |
29 * You should have received a copy of the GNU General Public License | |
30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
31 **/ | |
32 | |
33 | |
34 #pragma once | |
35 | |
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36 #include "ITagVisitor.h" |
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37 #include "../DicomFormat/DicomElement.h" |
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38 #include "../DicomFormat/DicomMap.h" |
791 | 39 |
0 | 40 #include <dcmtk/dcmdata/dcdatset.h> |
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41 #include <dcmtk/dcmdata/dcmetinf.h> |
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42 #include <dcmtk/dcmdata/dcpixseq.h> |
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43 #include <dcmtk/dcmdata/dcfilefo.h> |
0 | 44 #include <json/json.h> |
45 | |
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46 #if ORTHANC_ENABLE_DCMTK != 1 |
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47 # error The macro ORTHANC_ENABLE_DCMTK must be set to 1 |
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48 #endif |
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49 |
2126 | 50 #if ORTHANC_BUILD_UNIT_TESTS == 1 |
51 # include <gtest/gtest_prod.h> | |
52 #endif | |
53 | |
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54 #if !defined(ORTHANC_ENABLE_DCMTK_JPEG) |
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55 # error The macro ORTHANC_ENABLE_DCMTK_JPEG must be defined |
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56 #endif |
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57 |
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58 #if !defined(ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS) |
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59 # error The macro ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS must be defined |
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60 #endif |
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61 |
2126 | 62 |
62 | 63 namespace Orthanc |
0 | 64 { |
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65 class ORTHANC_PUBLIC FromDcmtkBridge : public boost::noncopyable |
0 | 66 { |
2126 | 67 #if ORTHANC_BUILD_UNIT_TESTS == 1 |
68 FRIEND_TEST(FromDcmtkBridge, FromJson); | |
69 #endif | |
70 | |
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71 friend class ParsedDicomFile; |
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72 |
2125 | 73 private: |
74 FromDcmtkBridge(); // Pure static class | |
75 | |
76 static void ExtractDicomSummary(DicomMap& target, | |
77 DcmItem& dataset, | |
78 unsigned int maxStringLength, | |
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79 Encoding defaultEncoding, |
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80 const std::set<DicomTag>& ignoreTagLength); |
2125 | 81 |
2126 | 82 static void DatasetToJson(Json::Value& parent, |
83 DcmItem& item, | |
84 DicomToJsonFormat format, | |
85 DicomToJsonFlags flags, | |
86 unsigned int maxStringLength, | |
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87 Encoding encoding, |
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88 bool hasCodeExtensions, |
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89 const std::set<DicomTag>& ignoreTagLength); |
2126 | 90 |
91 static void ElementToJson(Json::Value& parent, | |
92 DcmElement& element, | |
93 DicomToJsonFormat format, | |
94 DicomToJsonFlags flags, | |
95 unsigned int maxStringLength, | |
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96 Encoding dicomEncoding, |
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97 bool hasCodeExtensions, |
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98 const std::set<DicomTag>& ignoreTagLength); |
2126 | 99 |
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100 static void ExtractDicomAsJson(Json::Value& target, |
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101 DcmDataset& dataset, |
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102 DicomToJsonFormat format, |
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103 DicomToJsonFlags flags, |
2131 | 104 unsigned int maxStringLength, |
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105 Encoding defaultEncoding, |
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106 const std::set<DicomTag>& ignoreTagLength); |
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107 |
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108 static void ChangeStringEncoding(DcmItem& dataset, |
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109 Encoding source, |
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110 bool hasSourceCodeExtensions, |
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111 Encoding target); |
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112 |
0 | 113 public: |
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114 static void InitializeDictionary(bool loadPrivateDictionary); |
1656 | 115 |
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116 static void RegisterDictionaryTag(const DicomTag& tag, |
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117 ValueRepresentation vr, |
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118 const std::string& name, |
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119 unsigned int minMultiplicity, |
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120 unsigned int maxMultiplicity, |
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121 const std::string& privateCreator); |
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122 |
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123 static Encoding DetectEncoding(bool& hasCodeExtensions, |
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124 DcmItem& dataset, |
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125 Encoding defaultEncoding); |
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126 |
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127 static Encoding DetectEncoding(DcmItem& dataset, |
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128 Encoding defaultEncoding) |
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129 { |
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130 // Compatibility wrapper for Orthanc <= 1.5.4 |
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131 bool hasCodeExtensions; // ignored |
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132 return DetectEncoding(hasCodeExtensions, dataset, defaultEncoding); |
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133 } |
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134 |
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135 static DicomTag Convert(const DcmTag& tag); |
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136 |
0 | 137 static DicomTag GetTag(const DcmElement& element); |
138 | |
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139 static bool IsUnknownTag(const DicomTag& tag); |
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140 |
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141 static DicomValue* ConvertLeafElement(DcmElement& element, |
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142 DicomToJsonFlags flags, |
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143 unsigned int maxStringLength, |
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144 Encoding encoding, |
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145 bool hasCodeExtensions, |
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146 const std::set<DicomTag>& ignoreTagLength); |
0 | 147 |
2126 | 148 static void ExtractHeaderAsJson(Json::Value& target, |
149 DcmMetaInfo& header, | |
150 DicomToJsonFormat format, | |
151 DicomToJsonFlags flags, | |
152 unsigned int maxStringLength); | |
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153 |
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154 static std::string GetTagName(const DicomTag& tag, |
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155 const std::string& privateCreator); |
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156 |
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157 static std::string GetTagName(const DcmElement& element); |
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158 |
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159 static std::string GetTagName(const DicomElement& element) |
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160 { |
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161 return GetTagName(element.GetTag(), ""); |
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162 } |
0 | 163 |
304 | 164 static DicomTag ParseTag(const char* name); |
0 | 165 |
304 | 166 static DicomTag ParseTag(const std::string& name) |
0 | 167 { |
304 | 168 return ParseTag(name.c_str()); |
0 | 169 } |
170 | |
171 static bool HasTag(const DicomMap& fields, | |
172 const std::string& tagName) | |
173 { | |
304 | 174 return fields.HasTag(ParseTag(tagName)); |
0 | 175 } |
176 | |
177 static const DicomValue& GetValue(const DicomMap& fields, | |
178 const std::string& tagName) | |
179 { | |
304 | 180 return fields.GetValue(ParseTag(tagName)); |
0 | 181 } |
182 | |
183 static void SetValue(DicomMap& target, | |
184 const std::string& tagName, | |
185 DicomValue* value) | |
186 { | |
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187 const DicomTag tag = ParseTag(tagName); |
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188 target.SetValueInternal(tag.GetGroup(), tag.GetElement(), value); |
0 | 189 } |
190 | |
191 static void ToJson(Json::Value& result, | |
1368 | 192 const DicomMap& values, |
193 bool simplify); | |
176 | 194 |
788 | 195 static std::string GenerateUniqueIdentifier(ResourceType level); |
291
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196 |
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197 static bool SaveToMemoryBuffer(std::string& buffer, |
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198 DcmDataset& dataSet); |
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200 static bool Transcode(DcmFileFormat& dicom, |
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201 DicomTransferSyntax syntax, |
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202 const DcmRepresentationParameter* representation); |
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203 |
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204 static ValueRepresentation Convert(DcmEVR vr); |
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205 |
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206 static ValueRepresentation LookupValueRepresentation(const DicomTag& tag); |
1689 | 207 |
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208 static DcmElement* CreateElementForTag(const DicomTag& tag, |
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209 const std::string& privateCreator); |
1689 | 210 |
211 static void FillElementWithString(DcmElement& element, | |
1695 | 212 const std::string& utf8alue, // Encoded using UTF-8 |
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213 bool decodeDataUriScheme, |
1695 | 214 Encoding dicomEncoding); |
1689 | 215 |
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216 static DcmElement* FromJson(const DicomTag& tag, |
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217 const Json::Value& element, // Encoded using UTF-8 |
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218 bool decodeDataUriScheme, |
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219 Encoding dicomEncoding, |
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220 const std::string& privateCreator); |
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221 |
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222 static DcmPixelSequence* GetPixelSequence(DcmDataset& dataset); |
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223 |
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224 static Encoding ExtractEncoding(const Json::Value& json, |
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225 Encoding defaultEncoding); |
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226 |
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227 static DcmDataset* FromJson(const Json::Value& json, // Encoded using UTF-8 |
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228 bool generateIdentifiers, |
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229 bool decodeDataUriScheme, |
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230 Encoding defaultEncoding, |
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231 const std::string& privateCreator); |
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232 |
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233 static DcmFileFormat* LoadFromMemoryBuffer(const void* buffer, |
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234 size_t size); |
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235 |
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236 static void FromJson(DicomMap& values, |
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237 const Json::Value& result); |
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238 |
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239 static void ExtractDicomSummary(DicomMap& target, |
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240 DcmItem& dataset, |
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241 const std::set<DicomTag>& ignoreTagLength); |
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242 |
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243 static void ExtractDicomSummary(DicomMap& target, |
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244 DcmItem& dataset) |
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245 { |
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246 std::set<DicomTag> none; |
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247 ExtractDicomSummary(target, dataset, none); |
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248 } |
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249 |
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250 static void ExtractDicomAsJson(Json::Value& target, |
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251 DcmDataset& dataset, |
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252 const std::set<DicomTag>& ignoreTagLength); |
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253 |
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254 static void InitializeCodecs(); |
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255 |
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256 static void FinalizeCodecs(); |
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257 |
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258 static void Apply(DcmItem& dataset, |
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259 ITagVisitor& visitor, |
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260 Encoding defaultEncoding); |
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261 |
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262 static bool LookupDcmtkTransferSyntax(E_TransferSyntax& target, |
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263 DicomTransferSyntax source); |
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264 |
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265 static bool LookupOrthancTransferSyntax(DicomTransferSyntax& target, |
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266 E_TransferSyntax source); |
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268 static bool LookupOrthancTransferSyntax(DicomTransferSyntax& target, | |
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269 DcmFileFormat& dicom); |
0 | 270 }; |
271 } |