Mercurial > hg > orthanc

annotate OrthancServer/Sources/ServerIndex.cpp @ 4494:39192eb9b43d

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New metadata automatically computed at the instance level: "PixelDataOffset"
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 04 Feb 2021 15:31:00 +0100
parents 50b3f4c8107e
children 6f99949b2878
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
1900
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License as
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9 * published by the Free Software Foundation, either version 3 of the
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10 * License, or (at your option) any later version.
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11 *
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12 * In addition, as a special exception, the copyright holders of this
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13 * program give permission to link the code of its release with the
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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15 * that use the same license as the "OpenSSL" library), and distribute
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16 * the linked executables. You must obey the GNU General Public License
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17 * in all respects for all of the code used other than "OpenSSL". If you
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18 * modify file(s) with this exception, you may extend this exception to
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19 * your version of the file(s), but you are not obligated to do so. If
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20 * you do not wish to do so, delete this exception statement from your
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21 * version. If you delete this exception statement from all source files
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22 * in the program, then also delete it here.
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23 *
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24 * This program is distributed in the hope that it will be useful, but
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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27 * General Public License for more details.
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28 *
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29 * You should have received a copy of the GNU General Public License
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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31 **/
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33
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34 #include "PrecompiledHeadersServer.h"
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35 #include "ServerIndex.h"
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36
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37 #ifndef NOMINMAX
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38 #define NOMINMAX
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39 #endif
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40
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41 #include "../../OrthancFramework/Sources/DicomFormat/DicomArray.h"
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42 #include "../../OrthancFramework/Sources/DicomFormat/DicomStreamReader.h"
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43 #include "../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h"
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44 #include "../../OrthancFramework/Sources/DicomParsing/ParsedDicomFile.h"
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45 #include "../../OrthancFramework/Sources/Logging.h"
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46 #include "../../OrthancFramework/Sources/Toolbox.h"
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47
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48 #include "Database/ResourcesContent.h"
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49 #include "DicomInstanceToStore.h"
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50 #include "OrthancConfiguration.h"
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51 #include "Search/DatabaseLookup.h"
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52 #include "Search/DicomTagConstraint.h"
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53 #include "ServerContext.h"
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54 #include "ServerIndexChange.h"
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55 #include "ServerToolbox.h"
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57 #include <boost/lexical_cast.hpp>
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58 #include <stdio.h>
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59 #include <stack>
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60
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61 static const uint64_t MEGA_BYTES = 1024 * 1024;
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62
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63 namespace Orthanc
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64 {
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65 static void CopyListToVector(std::vector<std::string>& target,
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66 const std::list<std::string>& source)
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67 {
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68 target.resize(source.size());
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69
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70 size_t pos = 0;
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71
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72 for (std::list<std::string>::const_iterator
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73 it = source.begin(); it != source.end(); ++it)
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74 {
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75 target[pos] = *it;
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76 pos ++;
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77 }
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78 }
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80
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81 class ServerIndex::Listener : public IDatabaseListener
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82 {
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83 private:
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84 struct FileToRemove
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85 {
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86 private:
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87 std::string uuid_;
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88 FileContentType type_;
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89
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90 public:
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91 explicit FileToRemove(const FileInfo& info) :
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92 uuid_(info.GetUuid()),
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93 type_(info.GetContentType())
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94 {
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95 }
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96
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97 const std::string& GetUuid() const
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98 {
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99 return uuid_;
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100 }
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101
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102 FileContentType GetContentType() const
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103 {
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104 return type_;
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105 }
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106 };
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107
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108 ServerContext& context_;
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109 bool hasRemainingLevel_;
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110 ResourceType remainingType_;
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111 std::string remainingPublicId_;
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112 std::list<FileToRemove> pendingFilesToRemove_;
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113 std::list<ServerIndexChange> pendingChanges_;
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114 uint64_t sizeOfFilesToRemove_;
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115 bool insideTransaction_;
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116
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117 void Reset()
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118 {
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119 sizeOfFilesToRemove_ = 0;
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120 hasRemainingLevel_ = false;
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121 pendingFilesToRemove_.clear();
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122 pendingChanges_.clear();
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123 }
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124
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125 public:
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126 explicit Listener(ServerContext& context) :
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127 context_(context),
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128 insideTransaction_(false)
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129 {
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130 Reset();
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131 assert(ResourceType_Patient < ResourceType_Study &&
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132 ResourceType_Study < ResourceType_Series &&
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133 ResourceType_Series < ResourceType_Instance);
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134 }
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135
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136 void StartTransaction()
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137 {
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138 Reset();
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139 insideTransaction_ = true;
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140 }
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141
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142 void EndTransaction()
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143 {
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144 insideTransaction_ = false;
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145 }
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146
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147 uint64_t GetSizeOfFilesToRemove()
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148 {
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149 return sizeOfFilesToRemove_;
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150 }
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151
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152 void CommitFilesToRemove()
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153 {
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154 for (std::list<FileToRemove>::const_iterator
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155 it = pendingFilesToRemove_.begin();
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156 it != pendingFilesToRemove_.end(); ++it)
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157 {
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158 try
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159 {
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160 context_.RemoveFile(it->GetUuid(), it->GetContentType());
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161 }
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162 catch (OrthancException& e)
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163 {
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164 LOG(ERROR) << "Unable to remove an attachment from the storage area: "
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165 << it->GetUuid() << " (type: " << EnumerationToString(it->GetContentType()) << ")";
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166 }
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167 }
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168 }
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169
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170 void CommitChanges()
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171 {
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172 for (std::list<ServerIndexChange>::const_iterator
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173 it = pendingChanges_.begin();
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174 it != pendingChanges_.end(); ++it)
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175 {
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176 context_.SignalChange(*it);
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177 }
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178 }
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179
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180 virtual void SignalRemainingAncestor(ResourceType parentType,
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181 const std::string& publicId)
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182 {
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183 LOG(TRACE) << "Remaining ancestor \"" << publicId << "\" (" << parentType << ")";
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184
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185 if (hasRemainingLevel_)
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186 {
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187 if (parentType < remainingType_)
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188 {
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189 remainingType_ = parentType;
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190 remainingPublicId_ = publicId;
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191 }
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192 }
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193 else
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194 {
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195 hasRemainingLevel_ = true;
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196 remainingType_ = parentType;
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197 remainingPublicId_ = publicId;
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198 }
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199 }
201
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200
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201 virtual void SignalFileDeleted(const FileInfo& info)
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202 {
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203 assert(Toolbox::IsUuid(info.GetUuid()));
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204 pendingFilesToRemove_.push_back(FileToRemove(info));
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205 sizeOfFilesToRemove_ += info.GetCompressedSize();
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206 }
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207
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208 virtual void SignalChange(const ServerIndexChange& change)
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209 {
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210 LOG(TRACE) << "Change related to resource " << change.GetPublicId() << " of type "
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211 << EnumerationToString(change.GetResourceType()) << ": "
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212 << EnumerationToString(change.GetChangeType());
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213
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214 if (insideTransaction_)
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215 {
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216 pendingChanges_.push_back(change);
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217 }
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218 else
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219 {
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220 context_.SignalChange(change);
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221 }
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222 }
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223
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224 bool HasRemainingLevel() const
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225 {
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226 return hasRemainingLevel_;
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227 }
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228
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229 ResourceType GetRemainingType() const
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230 {
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231 assert(HasRemainingLevel());
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232 return remainingType_;
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233 }
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234
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235 const std::string& GetRemainingPublicId() const
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236 {
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237 assert(HasRemainingLevel());
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238 return remainingPublicId_;
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239 }
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240 };
0
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241
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242
278
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243 class ServerIndex::Transaction
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244 {
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245 private:
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246 ServerIndex& index_;
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247 std::unique_ptr<IDatabaseWrapper::ITransaction> transaction_;
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248 bool isCommitted_;
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249
278
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250 public:
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251 explicit Transaction(ServerIndex& index) :
278
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252 index_(index),
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253 isCommitted_(false)
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254 {
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255 transaction_.reset(index_.db_.StartTransaction());
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256 transaction_->Begin();
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257
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258 index_.listener_->StartTransaction();
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259 }
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260
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261 ~Transaction()
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262 {
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263 index_.listener_->EndTransaction();
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264
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265 if (!isCommitted_)
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266 {
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267 transaction_->Rollback();
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268 }
278
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269 }
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270
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271 void Commit(uint64_t sizeOfAddedFiles)
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272 {
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273 if (!isCommitted_)
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274 {
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275 int64_t delta = (static_cast<int64_t>(sizeOfAddedFiles) -
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276 static_cast<int64_t>(index_.listener_->GetSizeOfFilesToRemove()));
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277
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278 transaction_->Commit(delta);
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279
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280 // We can remove the files once the SQLite transaction has
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281 // been successfully committed. Some files might have to be
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282 // deleted because of recycling.
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283 index_.listener_->CommitFilesToRemove();
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284
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285 // Send all the pending changes to the Orthanc plugins
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286 index_.listener_->CommitChanges();
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287
278
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288 isCommitted_ = true;
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289 }
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290 }
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291 };
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292
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293
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294 class ServerIndex::UnstableResourcePayload
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295 {
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296 private:
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297 ResourceType type_;
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298 std::string publicId_;
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299 boost::posix_time::ptime time_;
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300
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301 public:
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302 UnstableResourcePayload() : type_(ResourceType_Instance)
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303 {
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304 }
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305
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306 UnstableResourcePayload(Orthanc::ResourceType type,
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307 const std::string& publicId) :
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308 type_(type),
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309 publicId_(publicId),
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310 time_(boost::posix_time::second_clock::local_time())
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311 {
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312 }
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313
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314 unsigned int GetAge() const
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315 {
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316 return (boost::posix_time::second_clock::local_time() - time_).total_seconds();
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317 }
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318
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319 ResourceType GetResourceType() const
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320 {
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321 return type_;
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322 }
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323
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324 const std::string& GetPublicId() const
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325 {
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326 return publicId_;
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327 }
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328 };
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329
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330
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331 class ServerIndex::MainDicomTagsRegistry : public boost::noncopyable
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332 {
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333 private:
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334 class TagInfo
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335 {
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336 private:
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337 ResourceType level_;
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338 DicomTagType type_;
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339
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340 public:
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341 TagInfo()
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342 {
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343 }
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344
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345 TagInfo(ResourceType level,
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346 DicomTagType type) :
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347 level_(level),
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348 type_(type)
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349 {
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350 }
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351
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352 ResourceType GetLevel() const
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353 {
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354 return level_;
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355 }
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356
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357 DicomTagType GetType() const
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358 {
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359 return type_;
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360 }
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361 };
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362
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363 typedef std::map<DicomTag, TagInfo> Registry;
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364
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365
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366 Registry registry_;
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367
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368 void LoadTags(ResourceType level)
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369 {
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370 {
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371 const DicomTag* tags = NULL;
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372 size_t size;
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373
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374 ServerToolbox::LoadIdentifiers(tags, size, level);
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375
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376 for (size_t i = 0; i < size; i++)
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377 {
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378 if (registry_.find(tags[i]) == registry_.end())
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379 {
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380 registry_[tags[i]] = TagInfo(level, DicomTagType_Identifier);
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381 }
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382 else
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383 {
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384 // These patient-level tags are copied in the study level
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385 assert(level == ResourceType_Study &&
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386 (tags[i] == DICOM_TAG_PATIENT_ID ||
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387 tags[i] == DICOM_TAG_PATIENT_NAME ||
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388 tags[i] == DICOM_TAG_PATIENT_BIRTH_DATE));
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389 }
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390 }
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391 }
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392
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393 {
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394 std::set<DicomTag> tags;
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395 DicomMap::GetMainDicomTags(tags, level);
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396
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397 for (std::set<DicomTag>::const_iterator
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398 tag = tags.begin(); tag != tags.end(); ++tag)
3027
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399 {
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400 if (registry_.find(*tag) == registry_.end())
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401 {
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402 registry_[*tag] = TagInfo(level, DicomTagType_Main);
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403 }
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404 }
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diff changeset
405 }
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diff changeset
406 }
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diff changeset
407
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408 public:
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409 MainDicomTagsRegistry()
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410 {
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diff changeset
411 LoadTags(ResourceType_Patient);
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412 LoadTags(ResourceType_Study);
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413 LoadTags(ResourceType_Series);
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414 LoadTags(ResourceType_Instance);
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415 }
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416
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417 void LookupTag(ResourceType& level,
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418 DicomTagType& type,
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419 const DicomTag& tag) const
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420 {
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421 Registry::const_iterator it = registry_.find(tag);
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422
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423 if (it == registry_.end())
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424 {
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diff changeset
425 // Default values
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diff changeset
426 level = ResourceType_Instance;
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diff changeset
427 type = DicomTagType_Generic;
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428 }
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diff changeset
429 else
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diff changeset
430 {
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diff changeset
431 level = it->second.GetLevel();
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diff changeset
432 type = it->second.GetType();
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
433 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
434 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
435 };
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
436
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
437
212
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 206
diff changeset
438 bool ServerIndex::DeleteResource(Json::Value& target,
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
439 const std::string& uuid,
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
440 ResourceType expectedType)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
441 {
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
442 boost::mutex::scoped_lock lock(mutex_);
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
443
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
444 Transaction t(*this);
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
445
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
446 int64_t id;
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
447 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
448 if (!db_.LookupResource(id, type, uuid) ||
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
449 expectedType != type)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
450 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
451 return false;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
452 }
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
453
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
454 db_.DeleteResource(id);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
455
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
456 if (listener_->HasRemainingLevel())
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
457 {
4205
d962a2996637 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4140
diff changeset
458 ResourceType remainingType = listener_->GetRemainingType();
d962a2996637 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4140
diff changeset
459 const std::string& remainingUuid = listener_->GetRemainingPublicId();
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
460
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
461 target["RemainingAncestor"] = Json::Value(Json::objectValue);
4205
d962a2996637 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4140
diff changeset
462 target["RemainingAncestor"]["Path"] = GetBasePath(remainingType, remainingUuid);
d962a2996637 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4140
diff changeset
463 target["RemainingAncestor"]["Type"] = EnumerationToString(remainingType);
d962a2996637 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4140
diff changeset
464 target["RemainingAncestor"]["ID"] = remainingUuid;
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
465 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
466 else
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
467 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
468 target["RemainingAncestor"] = Json::nullValue;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
469 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
470
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
471 t.Commit(0);
264
5b8e8b74bc8b remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 240
diff changeset
472
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
473 return true;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
474 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
475
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
476
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
477 void ServerIndex::FlushThread(ServerIndex* that,
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
478 unsigned int threadSleep)
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
479 {
1102
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
480 // By default, wait for 10 seconds before flushing
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
481 unsigned int sleep = 10;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
482
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
483 try
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
484 {
744
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 739
diff changeset
485 boost::mutex::scoped_lock lock(that->mutex_);
1239
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
486 std::string sleepString;
1102
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
487
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
488 if (that->db_.LookupGlobalProperty(sleepString, GlobalProperty_FlushSleep) &&
1239
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
489 Toolbox::IsInteger(sleepString))
1102
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
490 {
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
491 sleep = boost::lexical_cast<unsigned int>(sleepString);
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
492 }
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
493 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
494 catch (boost::bad_lexical_cast&)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
495 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
496 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
497
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
498 LOG(INFO) << "Starting the database flushing thread (sleep = " << sleep << ")";
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
499
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
500 unsigned int count = 0;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
501
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
502 while (!that->done_)
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
503 {
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
504 boost::this_thread::sleep(boost::posix_time::milliseconds(threadSleep));
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
505 count++;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
506 if (count < sleep)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
507 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
508 continue;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
509 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
510
2217
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
511 Logging::Flush();
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
512
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
513 boost::mutex::scoped_lock lock(that->mutex_);
3698
356ebef2cd95 prevent crash on full disk
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
514
356ebef2cd95 prevent crash on full disk
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
515 try
356ebef2cd95 prevent crash on full disk
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
516 {
356ebef2cd95 prevent crash on full disk
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
517 that->db_.FlushToDisk();
356ebef2cd95 prevent crash on full disk
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
518 }
356ebef2cd95 prevent crash on full disk
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
519 catch (OrthancException&)
356ebef2cd95 prevent crash on full disk
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
520 {
3699
efa815dd2c20 additional logging
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3698
diff changeset
521 LOG(ERROR) << "Cannot flush the SQLite database to the disk (is your filesystem full?)";
3698
356ebef2cd95 prevent crash on full disk
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
522 }
356ebef2cd95 prevent crash on full disk
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
523
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
524 count = 0;
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
525 }
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
526
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
527 LOG(INFO) << "Stopping the database flushing thread";
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
528 }
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
529
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
530
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
531 static bool ComputeExpectedNumberOfInstances(int64_t& target,
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
532 const DicomMap& dicomSummary)
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
533 {
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
534 try
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
535 {
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
536 const DicomValue* value;
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
537 const DicomValue* value2;
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
538
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
539 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGES_IN_ACQUISITION)) != NULL &&
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
540 !value->IsNull() &&
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
541 !value->IsBinary() &&
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
542 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS)) != NULL &&
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
543 !value2->IsNull() &&
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
544 !value2->IsBinary())
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
545 {
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
546 // Patch for series with temporal positions thanks to Will Ryder
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
547 int64_t imagesInAcquisition = boost::lexical_cast<int64_t>(value->GetContent());
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
548 int64_t countTemporalPositions = boost::lexical_cast<int64_t>(value2->GetContent());
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
549 target = imagesInAcquisition * countTemporalPositions;
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
550 return (target > 0);
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
551 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
552
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
553 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_SLICES)) != NULL &&
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
554 !value->IsNull() &&
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
555 !value->IsBinary() &&
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
556 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TIME_SLICES)) != NULL &&
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
557 !value2->IsBinary() &&
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
558 !value2->IsNull())
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
559 {
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
560 // Support of Cardio-PET images
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
561 int64_t numberOfSlices = boost::lexical_cast<int64_t>(value->GetContent());
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
562 int64_t numberOfTimeSlices = boost::lexical_cast<int64_t>(value2->GetContent());
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
563 target = numberOfSlices * numberOfTimeSlices;
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
564 return (target > 0);
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
565 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
566
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
567 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)) != NULL &&
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
568 !value->IsNull() &&
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
569 !value->IsBinary())
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
570 {
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
571 target = boost::lexical_cast<int64_t>(value->GetContent());
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
572 return (target > 0);
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
573 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
574 }
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
575 catch (OrthancException&)
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
576 {
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
577 }
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
578 catch (boost::bad_lexical_cast&)
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
579 {
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
580 }
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
581
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
582 return false;
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
583 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
584
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
585
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
586
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
587
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
588 static bool LookupStringMetadata(std::string& result,
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
589 const std::map<MetadataType, std::string>& metadata,
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
590 MetadataType type)
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
591 {
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
592 std::map<MetadataType, std::string>::const_iterator found = metadata.find(type);
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
593
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
594 if (found == metadata.end())
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
595 {
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
596 return false;
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
597 }
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
598 else
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
599 {
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
600 result = found->second;
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
601 return true;
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
602 }
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
603 }
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
604
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
605
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
606 static bool LookupIntegerMetadata(int64_t& result,
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
607 const std::map<MetadataType, std::string>& metadata,
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
608 MetadataType type)
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
609 {
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
610 std::string s;
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
611 if (!LookupStringMetadata(s, metadata, type))
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
612 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
613 return false;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
614 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
615
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
616 try
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
617 {
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
618 result = boost::lexical_cast<int64_t>(s);
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
619 return true;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
620 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
621 catch (boost::bad_lexical_cast&)
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
622 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
623 return false;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
624 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
625 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
626
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
627
1297
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
628 void ServerIndex::LogChange(int64_t internalId,
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
629 ChangeType changeType,
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
630 ResourceType resourceType,
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
631 const std::string& publicId)
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
632 {
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
633 ServerIndexChange change(changeType, resourceType, publicId);
1300
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
634
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
635 if (changeType <= ChangeType_INTERNAL_LastLogged)
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
636 {
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
637 db_.LogChange(internalId, change);
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
638 }
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
639
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
640 assert(listener_.get() != NULL);
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
641 listener_->SignalChange(change);
1297
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
642 }
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
643
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
644
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
645 uint64_t ServerIndex::IncrementGlobalSequenceInternal(GlobalProperty property)
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
646 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
647 std::string oldValue;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
648
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
649 if (db_.LookupGlobalProperty(oldValue, property))
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
650 {
4371
4a3ba4bf4ba7 making ServerIndex::IncrementGlobalSequence() more fault-tolerant
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
651 uint64_t oldNumber;
4a3ba4bf4ba7 making ServerIndex::IncrementGlobalSequence() more fault-tolerant
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
652
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
653 try
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
654 {
4371
4a3ba4bf4ba7 making ServerIndex::IncrementGlobalSequence() more fault-tolerant
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
655 oldNumber = boost::lexical_cast<uint64_t>(oldValue);
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
656 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
657 catch (boost::bad_lexical_cast&)
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
658 {
4371
4a3ba4bf4ba7 making ServerIndex::IncrementGlobalSequence() more fault-tolerant
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
659 LOG(ERROR) << "Cannot read the global sequence "
4a3ba4bf4ba7 making ServerIndex::IncrementGlobalSequence() more fault-tolerant
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
660 << boost::lexical_cast<std::string>(property) << ", resetting it";
4a3ba4bf4ba7 making ServerIndex::IncrementGlobalSequence() more fault-tolerant
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
661 oldNumber = 0;
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
662 }
4371
4a3ba4bf4ba7 making ServerIndex::IncrementGlobalSequence() more fault-tolerant
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
663
4a3ba4bf4ba7 making ServerIndex::IncrementGlobalSequence() more fault-tolerant
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
664 db_.SetGlobalProperty(property, boost::lexical_cast<std::string>(oldNumber + 1));
4a3ba4bf4ba7 making ServerIndex::IncrementGlobalSequence() more fault-tolerant
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
665 return oldNumber + 1;
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
666 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
667 else
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
668 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
669 // Initialize the sequence at "1"
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
670 db_.SetGlobalProperty(property, "1");
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
671 return 1;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
672 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
673 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
674
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
675
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
676
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
677 ServerIndex::ServerIndex(ServerContext& context,
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
678 IDatabaseWrapper& db,
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
679 unsigned int threadSleep) :
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
680 done_(false),
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
681 db_(db),
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
682 maximumStorageSize_(0),
2826
c277e0421200 unit testing of overwriting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
683 maximumPatients_(0),
3027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
684 mainDicomTagsRegistry_(new MainDicomTagsRegistry)
186
f68c039b0571 preparing refactoring of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 180
diff changeset
685 {
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
686 listener_.reset(new Listener(context));
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
687 db_.SetListener(*listener_);
180
626777d01dc4 use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 179
diff changeset
688
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
689 // Initial recycling if the parameters have changed since the last
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
690 // execution of Orthanc
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
691 StandaloneRecycling();
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
692
1306
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
693 if (db.HasFlushToDisk())
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
694 {
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
695 flushThread_ = boost::thread(FlushThread, this, threadSleep);
1306
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
696 }
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
697
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
698 unstableResourcesMonitorThread_ = boost::thread
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
699 (UnstableResourcesMonitorThread, this, threadSleep);
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
700 }
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
701
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
702
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
703
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
704 ServerIndex::~ServerIndex()
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
705 {
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
706 if (!done_)
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
707 {
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
708 LOG(ERROR) << "INTERNAL ERROR: ServerIndex::Stop() should be invoked manually to avoid mess in the destruction order!";
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
709 Stop();
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
710 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
711 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
712
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
713
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
714
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
715 void ServerIndex::Stop()
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
716 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
717 if (!done_)
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
718 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
719 done_ = true;
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
720
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
721 if (db_.HasFlushToDisk() &&
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
722 flushThread_.joinable())
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
723 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
724 flushThread_.join();
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
725 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
726
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
727 if (unstableResourcesMonitorThread_.joinable())
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
728 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
729 unstableResourcesMonitorThread_.join();
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
730 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
731 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
732 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
733
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
734
3086
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
735 static void SetInstanceMetadata(ResourcesContent& content,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
736 std::map<MetadataType, std::string>& instanceMetadata,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
737 int64_t instance,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
738 MetadataType metadata,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
739 const std::string& value)
2188
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
740 {
3086
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
741 content.AddMetadata(instance, metadata, value);
2188
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
742 instanceMetadata[metadata] = value;
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
743 }
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
744
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
745
3080
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
746 void ServerIndex::SignalNewResource(ChangeType changeType,
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
747 ResourceType level,
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
748 const std::string& publicId,
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
749 int64_t internalId)
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
750 {
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
751 ServerIndexChange change(changeType, level, publicId);
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
752 db_.LogChange(internalId, change);
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
753
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
754 assert(listener_.get() != NULL);
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
755 listener_->SignalChange(change);
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
756 }
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
757
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
758
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
759 StoreStatus ServerIndex::Store(std::map<MetadataType, std::string>& instanceMetadata,
1822
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
760 DicomInstanceToStore& instanceToStore,
3813
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
761 const Attachments& attachments,
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
762 bool overwrite)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
763 {
4494
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
764 std::string pixelDataOffset;
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
765
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
766 {
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
767 // Determining the pixel data offset is costly, don't do it
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
768 // within the mutex (new in Orthanc 1.9.1)
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
769 uint64_t offset;
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
770 if (DicomStreamReader::LookupPixelDataOffset(offset, instanceToStore.GetBufferData(),
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
771 instanceToStore.GetBufferSize()))
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
772 {
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
773 pixelDataOffset = boost::lexical_cast<std::string>(offset);
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
774 }
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
775 else
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
776 {
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
777 pixelDataOffset.clear();
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
778 }
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
779 }
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
780
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
781 boost::mutex::scoped_lock lock(mutex_);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
782
1822
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
783 const DicomMap& dicomSummary = instanceToStore.GetSummary();
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
784 const ServerIndex::MetadataMap& metadata = instanceToStore.GetMetadata();
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
785
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
786 int64_t expectedInstances;
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
787 const bool hasExpectedInstances =
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
788 ComputeExpectedNumberOfInstances(expectedInstances, dicomSummary);
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
789
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
790 instanceMetadata.clear();
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
791
3080
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
792 const std::string hashPatient = instanceToStore.GetHasher().HashPatient();
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
793 const std::string hashStudy = instanceToStore.GetHasher().HashStudy();
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
794 const std::string hashSeries = instanceToStore.GetHasher().HashSeries();
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
795 const std::string hashInstance = instanceToStore.GetHasher().HashInstance();
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
796
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
797 try
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
798 {
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
799 Transaction t(*this);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
800
3080
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
801 IDatabaseWrapper::CreateInstanceResult status;
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
802 int64_t instanceId;
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
803
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
804 // Check whether this instance is already stored
3080
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
805 if (!db_.CreateInstance(status, instanceId, hashPatient,
3082
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
806 hashStudy, hashSeries, hashInstance))
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
807 {
3082
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
808 // The instance already exists
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
809
3813
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
810 if (overwrite)
3082
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
811 {
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
812 // Overwrite the old instance
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
813 LOG(INFO) << "Overwriting instance: " << hashInstance;
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
814 db_.DeleteResource(instanceId);
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
815
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
816 // Re-create the instance, now that the old one is removed
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
817 if (!db_.CreateInstance(status, instanceId, hashPatient,
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
818 hashStudy, hashSeries, hashInstance))
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
819 {
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
820 throw OrthancException(ErrorCode_InternalError);
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
821 }
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
822 }
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
823 else
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
824 {
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
825 // Do nothing if the instance already exists and overwriting is disabled
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
826 db_.GetAllMetadata(instanceMetadata, instanceId);
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
827 return StoreStatus_AlreadyStored;
847a0ed92654 new extension for database plugin SDK: createInstance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3080
diff changeset
828 }
3080
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
829 }
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
830
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
831
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
832 // Warn about the creation of new resources. The order must be
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
833 // from instance to patient.
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
834
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
835 // NB: In theory, could be sped up by grouping the underlying
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
836 // calls to "db_.LogChange()". However, this would only have an
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
837 // impact when new patient/study/series get created, which
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
838 // occurs far less often that creating new instances. The
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
839 // positive impact looks marginal in practice.
3080
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
840 SignalNewResource(ChangeType_NewInstance, ResourceType_Instance, hashInstance, instanceId);
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
841
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
842 if (status.isNewSeries_)
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
843 {
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
844 SignalNewResource(ChangeType_NewSeries, ResourceType_Series, hashSeries, status.seriesId_);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
845 }
3080
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
846
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
847 if (status.isNewStudy_)
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
848 {
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
849 SignalNewResource(ChangeType_NewStudy, ResourceType_Study, hashStudy, status.studyId_);
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
850 }
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
851
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
852 if (status.isNewPatient_)
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
853 {
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
854 SignalNewResource(ChangeType_NewPatient, ResourceType_Patient, hashPatient, status.patientId_);
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
855 }
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
856
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
857
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
858 // Ensure there is enough room in the storage for the new instance
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
859 uint64_t instanceSize = 0;
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
860 for (Attachments::const_iterator it = attachments.begin();
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
861 it != attachments.end(); ++it)
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
862 {
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
863 instanceSize += it->GetCompressedSize();
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
864 }
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
865
3080
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
866 Recycle(instanceSize, hashPatient /* don't consider the current patient for recycling */);
3086
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
867
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
868
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
869 // Attach the files to the newly created instance
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
870 for (Attachments::const_iterator it = attachments.begin();
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
871 it != attachments.end(); ++it)
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
872 {
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
873 db_.AddAttachment(instanceId, *it);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
874 }
3080
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
875
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
876
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
877 {
3083
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
878 ResourcesContent content;
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
879
3086
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
880 // Populate the tags of the newly-created resources
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
881
3083
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
882 content.AddResource(instanceId, ResourceType_Instance, dicomSummary);
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
883
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
884 if (status.isNewSeries_)
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
885 {
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
886 content.AddResource(status.seriesId_, ResourceType_Series, dicomSummary);
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
887 }
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
888
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
889 if (status.isNewStudy_)
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
890 {
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
891 content.AddResource(status.studyId_, ResourceType_Study, dicomSummary);
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
892 }
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
893
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
894 if (status.isNewPatient_)
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
895 {
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
896 content.AddResource(status.patientId_, ResourceType_Patient, dicomSummary);
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
897 }
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
898
3086
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
899
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
900 // Attach the user-specified metadata
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
901
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
902 for (MetadataMap::const_iterator
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
903 it = metadata.begin(); it != metadata.end(); ++it)
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
904 {
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
905 switch (it->first.first)
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
906 {
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
907 case ResourceType_Patient:
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
908 content.AddMetadata(status.patientId_, it->first.second, it->second);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
909 break;
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
910
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
911 case ResourceType_Study:
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
912 content.AddMetadata(status.studyId_, it->first.second, it->second);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
913 break;
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
914
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
915 case ResourceType_Series:
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
916 content.AddMetadata(status.seriesId_, it->first.second, it->second);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
917 break;
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
918
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
919 case ResourceType_Instance:
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
920 SetInstanceMetadata(content, instanceMetadata, instanceId,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
921 it->first.second, it->second);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
922 break;
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
923
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
924 default:
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
925 throw OrthancException(ErrorCode_ParameterOutOfRange);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
926 }
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
927 }
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
928
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
929
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
930 // Attach the auto-computed metadata for the patient/study/series levels
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
931 std::string now = SystemToolbox::GetNowIsoString(true /* use UTC time (not local time) */);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
932 content.AddMetadata(status.seriesId_, MetadataType_LastUpdate, now);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
933 content.AddMetadata(status.studyId_, MetadataType_LastUpdate, now);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
934 content.AddMetadata(status.patientId_, MetadataType_LastUpdate, now);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
935
4460
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
936 if (status.isNewSeries_)
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
937 {
4460
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
938 if (hasExpectedInstances)
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
939 {
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
940 content.AddMetadata(status.seriesId_, MetadataType_Series_ExpectedNumberOfInstances,
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
941 boost::lexical_cast<std::string>(expectedInstances));
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
942 }
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
943
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
944 // New in Orthanc 1.9.0
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
945 content.AddMetadata(status.seriesId_, MetadataType_RemoteAet,
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
946 instanceToStore.GetOrigin().GetRemoteAetC());
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
947 }
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
948
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
949
3086
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
950 // Attach the auto-computed metadata for the instance level,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
951 // reflecting these additions into the input metadata map
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
952 SetInstanceMetadata(content, instanceMetadata, instanceId,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
953 MetadataType_Instance_ReceptionDate, now);
4460
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
954 SetInstanceMetadata(content, instanceMetadata, instanceId, MetadataType_RemoteAet,
3086
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
955 instanceToStore.GetOrigin().GetRemoteAetC());
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
956 SetInstanceMetadata(content, instanceMetadata, instanceId, MetadataType_Instance_Origin,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
957 EnumerationToString(instanceToStore.GetOrigin().GetRequestOrigin()));
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
958
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
959
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
960 {
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
961 std::string s;
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
962
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
963 if (instanceToStore.LookupTransferSyntax(s))
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
964 {
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
965 // New in Orthanc 1.2.0
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
966 SetInstanceMetadata(content, instanceMetadata, instanceId,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
967 MetadataType_Instance_TransferSyntax, s);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
968 }
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
969
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
970 if (instanceToStore.GetOrigin().LookupRemoteIp(s))
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
971 {
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
972 // New in Orthanc 1.4.0
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
973 SetInstanceMetadata(content, instanceMetadata, instanceId,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
974 MetadataType_Instance_RemoteIp, s);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
975 }
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
976
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
977 if (instanceToStore.GetOrigin().LookupCalledAet(s))
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
978 {
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
979 // New in Orthanc 1.4.0
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
980 SetInstanceMetadata(content, instanceMetadata, instanceId,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
981 MetadataType_Instance_CalledAet, s);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
982 }
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
983
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
984 if (instanceToStore.GetOrigin().LookupHttpUsername(s))
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
985 {
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
986 // New in Orthanc 1.4.0
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
987 SetInstanceMetadata(content, instanceMetadata, instanceId,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
988 MetadataType_Instance_HttpUsername, s);
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
989 }
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
990 }
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
991
4494
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
992 // New in Orthanc 1.9.1
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
993 SetInstanceMetadata(content, instanceMetadata, instanceId,
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
994 MetadataType_Instance_PixelDataOffset, pixelDataOffset);
39192eb9b43d New metadata automatically computed at the instance level: "PixelDataOffset"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4488
diff changeset
995
3086
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
996
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
997 const DicomValue* value;
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
998 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_SOP_CLASS_UID)) != NULL &&
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
999 !value->IsNull() &&
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1000 !value->IsBinary())
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1001 {
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1002 SetInstanceMetadata(content, instanceMetadata, instanceId,
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1003 MetadataType_Instance_SopClassUid, value->GetContent());
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1004 }
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1005
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1006
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1007 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_INSTANCE_NUMBER)) != NULL ||
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1008 (value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGE_INDEX)) != NULL)
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1009 {
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1010 if (!value->IsNull() &&
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1011 !value->IsBinary())
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1012 {
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1013 SetInstanceMetadata(content, instanceMetadata, instanceId,
4263
61a2bedbae80 sanitize IndexInSeries (we've seen spaces there !)
Alain Mazy <alain@mazy.be>
parents: 4205
diff changeset
1014 MetadataType_Instance_IndexInSeries, Toolbox::StripSpaces(value->GetContent()));
3086
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1015 }
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1016 }
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1017
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1018
3083
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
1019 db_.SetResourcesContent(content);
3080
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
1020 }
3086
74e3e48aa9bd grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3083
diff changeset
1021
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1022
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1023 // Check whether the series of this new instance is now completed
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1024 int64_t expectedNumberOfInstances;
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1025 if (ComputeExpectedNumberOfInstances(expectedNumberOfInstances, dicomSummary))
205
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
1026 {
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1027 SeriesStatus seriesStatus = GetSeriesStatus(status.seriesId_, expectedNumberOfInstances);
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1028 if (seriesStatus == SeriesStatus_Complete)
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1029 {
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1030 LogChange(status.seriesId_, ChangeType_CompletedSeries, ResourceType_Series, hashSeries);
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1031 }
205
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
1032 }
3087
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3086
diff changeset
1033
205
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
1034
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1035 // Mark the parent resources of this instance as unstable
3080
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
1036 MarkAsUnstable(status.seriesId_, ResourceType_Series, hashSeries);
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
1037 MarkAsUnstable(status.studyId_, ResourceType_Study, hashStudy);
1a75595d8e44 started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3075
diff changeset
1038 MarkAsUnstable(status.patientId_, ResourceType_Patient, hashPatient);
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1039
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
1040 t.Commit(instanceSize);
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1041
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1042 return StoreStatus_Success;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1043 }
62
a70bb32802ae renaming Server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
1044 catch (OrthancException& e)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1045 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1046 LOG(ERROR) << "EXCEPTION [" << e.What() << "]";
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1047 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1048
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1049 return StoreStatus_Failure;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1050 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1051
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1052
3174
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1053 void ServerIndex::GetGlobalStatistics(/* out */ uint64_t& diskSize,
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1054 /* out */ uint64_t& uncompressedSize,
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1055 /* out */ uint64_t& countPatients,
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1056 /* out */ uint64_t& countStudies,
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1057 /* out */ uint64_t& countSeries,
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1058 /* out */ uint64_t& countInstances)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1059 {
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
1060 boost::mutex::scoped_lock lock(mutex_);
3174
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1061 diskSize = db_.GetTotalCompressedSize();
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1062 uncompressedSize = db_.GetTotalUncompressedSize();
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1063 countPatients = db_.GetResourceCount(ResourceType_Patient);
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1064 countStudies = db_.GetResourceCount(ResourceType_Study);
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1065 countSeries = db_.GetResourceCount(ResourceType_Series);
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1066 countInstances = db_.GetResourceCount(ResourceType_Instance);
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
1067 }
187
8e673a65564d refactoring of storing new instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
1068
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1069
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1070 SeriesStatus ServerIndex::GetSeriesStatus(int64_t id,
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1071 int64_t expectedNumberOfInstances)
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1072 {
3091
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1073 std::list<std::string> values;
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1074 db_.GetChildrenMetadata(values, id, MetadataType_Instance_IndexInSeries);
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1075
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1076 std::set<int64_t> instances;
3091
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1077
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1078 for (std::list<std::string>::const_iterator
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1079 it = values.begin(); it != values.end(); ++it)
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1080 {
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1081 int64_t index;
3091
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1082
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1083 try
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1084 {
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1085 index = boost::lexical_cast<int64_t>(*it);
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1086 }
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1087 catch (boost::bad_lexical_cast&)
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1088 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1089 return SeriesStatus_Unknown;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1090 }
3091
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1091
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1092 if (!(index > 0 && index <= expectedNumberOfInstances))
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1093 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1094 // Out-of-range instance index
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1095 return SeriesStatus_Inconsistent;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1096 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1097
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1098 if (instances.find(index) != instances.end())
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1099 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1100 // Twice the same instance index
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1101 return SeriesStatus_Inconsistent;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1102 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1103
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1104 instances.insert(index);
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1105 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1106
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1107 if (static_cast<int64_t>(instances.size()) == expectedNumberOfInstances)
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1108 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1109 return SeriesStatus_Complete;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1110 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1111 else
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1112 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1113 return SeriesStatus_Missing;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1114 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1115 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1116
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1117
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
1118 void ServerIndex::MainDicomTagsToJson(Json::Value& target,
1668
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
1119 int64_t resourceId,
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
1120 ResourceType resourceType)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1121 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1122 DicomMap tags;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1123 db_.GetMainDicomTags(tags, resourceId);
1676
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1124
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1125 if (resourceType == ResourceType_Study)
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1126 {
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1127 DicomMap t1, t2;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1128 tags.ExtractStudyInformation(t1);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1129 tags.ExtractPatientInformation(t2);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1130
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1131 target["MainDicomTags"] = Json::objectValue;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1132 FromDcmtkBridge::ToJson(target["MainDicomTags"], t1, true);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1133
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1134 target["PatientMainDicomTags"] = Json::objectValue;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1135 FromDcmtkBridge::ToJson(target["PatientMainDicomTags"], t2, true);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1136 }
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1137 else
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1138 {
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1139 target["MainDicomTags"] = Json::objectValue;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1140 FromDcmtkBridge::ToJson(target["MainDicomTags"], tags, true);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
1141 }
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1142 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1143
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1144
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1145 bool ServerIndex::LookupResource(Json::Value& result,
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1146 const std::string& publicId,
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1147 ResourceType expectedType)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1148 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1149 result = Json::objectValue;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1150
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
1151 boost::mutex::scoped_lock lock(mutex_);
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1152
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1153 // Lookup for the requested resource
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1154 int64_t id;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1155 ResourceType type;
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1156 std::string parent;
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1157 if (!db_.LookupResourceAndParent(id, type, parent, publicId) ||
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1158 type != expectedType)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1159 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1160 return false;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1161 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1162
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1163 // Set information about the parent resource (if it exists)
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1164 if (type == ResourceType_Patient)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1165 {
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1166 if (!parent.empty())
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1167 {
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1168 throw OrthancException(ErrorCode_DatabasePlugin);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1169 }
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1170 }
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1171 else
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1172 {
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1173 if (parent.empty())
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1174 {
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1175 throw OrthancException(ErrorCode_DatabasePlugin);
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1176 }
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1177
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1178 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1179 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1180 case ResourceType_Study:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1181 result["ParentPatient"] = parent;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1182 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1183
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1184 case ResourceType_Series:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1185 result["ParentStudy"] = parent;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1186 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1187
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1188 case ResourceType_Instance:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1189 result["ParentSeries"] = parent;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1190 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1191
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1192 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1193 throw OrthancException(ErrorCode_InternalError);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1194 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1195 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1196
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1197 // List the children resources
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1198 std::list<std::string> children;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1199 db_.GetChildrenPublicId(children, id);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1200
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1201 if (type != ResourceType_Instance)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1202 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1203 Json::Value c = Json::arrayValue;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1204
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1205 for (std::list<std::string>::const_iterator
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
1206 it = children.begin(); it != children.end(); ++it)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1207 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1208 c.append(*it);
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1209 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1210
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1211 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1212 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1213 case ResourceType_Patient:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1214 result["Studies"] = c;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1215 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1216
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1217 case ResourceType_Study:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1218 result["Series"] = c;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1219 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1220
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1221 case ResourceType_Series:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1222 result["Instances"] = c;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1223 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1224
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1225 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1226 throw OrthancException(ErrorCode_InternalError);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1227 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1228 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1229
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1230 // Extract the metadata
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1231 std::map<MetadataType, std::string> metadata;
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1232 db_.GetAllMetadata(metadata, id);
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1233
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1234 // Set the resource type
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1235 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1236 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1237 case ResourceType_Patient:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1238 result["Type"] = "Patient";
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1239 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1240
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1241 case ResourceType_Study:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1242 result["Type"] = "Study";
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1243 break;
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1244
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1245 case ResourceType_Series:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1246 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1247 result["Type"] = "Series";
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1248
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1249 int64_t i;
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1250 if (LookupIntegerMetadata(i, metadata, MetadataType_Series_ExpectedNumberOfInstances))
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1251 {
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1252 result["ExpectedNumberOfInstances"] = static_cast<int>(i);
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1253 result["Status"] = EnumerationToString(GetSeriesStatus(id, i));
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1254 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1255 else
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1256 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1257 result["ExpectedNumberOfInstances"] = Json::nullValue;
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1258 result["Status"] = EnumerationToString(SeriesStatus_Unknown);
3090
31244604f617 starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3087
diff changeset
1259 }
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1260
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1261 break;
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1262 }
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1263
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1264 case ResourceType_Instance:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1265 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1266 result["Type"] = "Instance";
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1267
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1268 FileInfo attachment;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1269 if (!db_.LookupAttachment(attachment, id, FileContentType_Dicom))
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1270 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1271 throw OrthancException(ErrorCode_InternalError);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1272 }
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1273
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1274 result["FileSize"] = static_cast<unsigned int>(attachment.GetUncompressedSize());
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1275 result["FileUuid"] = attachment.GetUuid();
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1276
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1277 int64_t i;
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1278 if (LookupIntegerMetadata(i, metadata, MetadataType_Instance_IndexInSeries))
3091
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1279 {
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1280 result["IndexInSeries"] = static_cast<int>(i);
3091
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1281 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1282 else
3091
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1283 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1284 result["IndexInSeries"] = Json::nullValue;
3091
476cba12c2b0 IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3090
diff changeset
1285 }
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1286
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1287 break;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1288 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1289
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1290 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1291 throw OrthancException(ErrorCode_InternalError);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1292 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1293
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1294 // Record the remaining information
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1295 result["ID"] = publicId;
1668
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
1296 MainDicomTagsToJson(result, id, type);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1297
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1298 std::string tmp;
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1299
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1300 if (LookupStringMetadata(tmp, metadata, MetadataType_AnonymizedFrom))
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1301 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1302 result["AnonymizedFrom"] = tmp;
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1303 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1304
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1305 if (LookupStringMetadata(tmp, metadata, MetadataType_ModifiedFrom))
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1306 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1307 result["ModifiedFrom"] = tmp;
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1308 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1309
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1310 if (type == ResourceType_Patient ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1311 type == ResourceType_Study ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1312 type == ResourceType_Series)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1313 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1314 result["IsStable"] = !unstableResources_.Contains(id);
1148
ac36589f699e LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1139
diff changeset
1315
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1316 if (LookupStringMetadata(tmp, metadata, MetadataType_LastUpdate))
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1317 {
1148
ac36589f699e LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1139
diff changeset
1318 result["LastUpdate"] = tmp;
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1319 }
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1320 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1321
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1322 return true;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1323 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1324
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1325
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1326 bool ServerIndex::LookupAttachment(FileInfo& attachment,
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1327 const std::string& instanceUuid,
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
1328 FileContentType contentType)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1329 {
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
1330 boost::mutex::scoped_lock lock(mutex_);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1331
193
a1b9d1e1497b failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1332 int64_t id;
a1b9d1e1497b failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1333 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1334 if (!db_.LookupResource(id, type, instanceUuid))
192
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1335 {
1113
ba5c0908600c Refactoring of HttpOutput ("Content-Length" header is now always sent)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1102
diff changeset
1336 throw OrthancException(ErrorCode_UnknownResource);
192
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1337 }
193
a1b9d1e1497b failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1338
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1339 if (db_.LookupAttachment(attachment, id, contentType))
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1340 {
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
1341 assert(attachment.GetContentType() == contentType);
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1342 return true;
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1343 }
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1344 else
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1345 {
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1346 return false;
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1347 }
192
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1348 }
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1349
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1350
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1351
1354
3dd494f201a1 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1352
diff changeset
1352 void ServerIndex::GetAllUuids(std::list<std::string>& target,
190
b6cef9d45cc3 getallpublicids
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1353 ResourceType resourceType)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1354 {
1357
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1354
diff changeset
1355 boost::mutex::scoped_lock lock(mutex_);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1354
diff changeset
1356 db_.GetAllPublicIds(target, resourceType);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1357 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1358
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1359
1509
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1360 void ServerIndex::GetAllUuids(std::list<std::string>& target,
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1361 ResourceType resourceType,
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1362 size_t since,
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1363 size_t limit)
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1364 {
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1365 if (limit == 0)
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1366 {
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1367 target.clear();
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1368 return;
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1369 }
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1370
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1371 boost::mutex::scoped_lock lock(mutex_);
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1372 db_.GetAllPublicIds(target, resourceType, since, limit);
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1373 }
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1374
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1375
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1376 template <typename T>
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1377 static void FormatLog(Json::Value& target,
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1378 const std::list<T>& log,
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1379 const std::string& name,
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1380 bool done,
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1381 int64_t since,
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1382 bool hasLast,
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1383 int64_t last)
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1384 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1385 Json::Value items = Json::arrayValue;
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1386 for (typename std::list<T>::const_iterator
1304
7b6925b0890d cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1300
diff changeset
1387 it = log.begin(); it != log.end(); ++it)
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1388 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1389 Json::Value item;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1390 it->Format(item);
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1391 items.append(item);
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1392 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1393
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1394 target = Json::objectValue;
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1395 target[name] = items;
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1396 target["Done"] = done;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1397
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1398 if (!hasLast)
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1399 {
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1400 // Best-effort guess of the last index in the sequence
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1401 if (log.empty())
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1402 {
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1403 last = since;
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1404 }
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1405 else
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1406 {
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1407 last = log.back().GetSeq();
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1408 }
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1409 }
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1410
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1411 target["Last"] = static_cast<int>(last);
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1412 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1413
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1414
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1415 void ServerIndex::GetChanges(Json::Value& target,
204
7f4acf490179 changes api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 202
diff changeset
1416 int64_t since,
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1417 unsigned int maxResults)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1418 {
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1419 std::list<ServerIndexChange> changes;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1420 bool done;
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1421 bool hasLast = false;
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1422 int64_t last = 0;
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1423
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1424 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1425 boost::mutex::scoped_lock lock(mutex_);
2717
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1426
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1427 // Fix wrt. Orthanc <= 1.3.2: A transaction was missing, as
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1428 // "GetLastChange()" involves calls to "GetPublicId()"
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1429 Transaction transaction(*this);
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1430
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1431 db_.GetChanges(changes, done, since, maxResults);
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1432 if (changes.empty())
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1433 {
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1434 last = db_.GetLastChangeIndex();
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1435 hasLast = true;
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1436 }
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1437
2717
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1438 transaction.Commit(0);
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1439 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1440
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1441 FormatLog(target, changes, "Changes", done, since, hasLast, last);
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1442 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1443
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1444
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1445 void ServerIndex::GetLastChange(Json::Value& target)
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1446 {
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1447 std::list<ServerIndexChange> changes;
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1448 bool hasLast = false;
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1449 int64_t last = 0;
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1450
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1451 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1452 boost::mutex::scoped_lock lock(mutex_);
2717
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1453
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1454 // Fix wrt. Orthanc <= 1.3.2: A transaction was missing, as
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1455 // "GetLastChange()" involves calls to "GetPublicId()"
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1456 Transaction transaction(*this);
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1457
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1458 db_.GetLastChange(changes);
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1459 if (changes.empty())
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1460 {
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1461 last = db_.GetLastChangeIndex();
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1462 hasLast = true;
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1463 }
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1464
2717
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1465 transaction.Commit(0);
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1466 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1467
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1468 FormatLog(target, changes, "Changes", true, 0, hasLast, last);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1469 }
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1470
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1471
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1472 void ServerIndex::LogExportedResource(const std::string& publicId,
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1473 const std::string& remoteModality)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1474 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1475 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1476 Transaction transaction(*this);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1477
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1478 int64_t id;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1479 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1480 if (!db_.LookupResource(id, type, publicId))
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1481 {
2573
3372c5255333 StoreScuJob, Orthanc Explorer for jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
1482 throw OrthancException(ErrorCode_InexistentItem);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1483 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1484
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1485 std::string patientId;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1486 std::string studyInstanceUid;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1487 std::string seriesInstanceUid;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1488 std::string sopInstanceUid;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1489
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1490 int64_t currentId = id;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1491 ResourceType currentType = type;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1492
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1493 // Iteratively go up inside the patient/study/series/instance hierarchy
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1494 bool done = false;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1495 while (!done)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1496 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1497 DicomMap map;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1498 db_.GetMainDicomTags(map, currentId);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1499
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1500 switch (currentType)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1501 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1502 case ResourceType_Patient:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1503 if (map.HasTag(DICOM_TAG_PATIENT_ID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1504 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1505 patientId = map.GetValue(DICOM_TAG_PATIENT_ID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1506 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1507 done = true;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1508 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1509
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1510 case ResourceType_Study:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1511 if (map.HasTag(DICOM_TAG_STUDY_INSTANCE_UID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1512 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1513 studyInstanceUid = map.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1514 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1515 currentType = ResourceType_Patient;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1516 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1517
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1518 case ResourceType_Series:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1519 if (map.HasTag(DICOM_TAG_SERIES_INSTANCE_UID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1520 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1521 seriesInstanceUid = map.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1522 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1523 currentType = ResourceType_Study;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1524 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1525
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1526 case ResourceType_Instance:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1527 if (map.HasTag(DICOM_TAG_SOP_INSTANCE_UID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1528 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1529 sopInstanceUid = map.GetValue(DICOM_TAG_SOP_INSTANCE_UID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1530 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1531 currentType = ResourceType_Series;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1532 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1533
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1534 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1535 throw OrthancException(ErrorCode_InternalError);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1536 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1537
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1538 // If we have not reached the Patient level, find the parent of
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1539 // the current resource
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1540 if (!done)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1541 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1542 bool ok = db_.LookupParent(currentId, currentId);
4121
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
1543 (void) ok; // Remove warning about unused variable in release builds
375
d1ea72f1c967 major fix of storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1544 assert(ok);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1545 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1546 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1547
1246
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1548 ExportedResource resource(-1,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1549 type,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1550 publicId,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1551 remoteModality,
2475
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
1552 SystemToolbox::GetNowIsoString(true /* use UTC time (not local time) */),
1246
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1553 patientId,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1554 studyInstanceUid,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1555 seriesInstanceUid,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1556 sopInstanceUid);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1557
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1558 db_.LogExportedResource(resource);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1559 transaction.Commit(0);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1560 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1561
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1562
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1563 void ServerIndex::GetExportedResources(Json::Value& target,
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1564 int64_t since,
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1565 unsigned int maxResults)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1566 {
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1567 std::list<ExportedResource> exported;
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1568 bool done;
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1569
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1570 {
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1571 boost::mutex::scoped_lock lock(mutex_);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1572 db_.GetExportedResources(exported, done, since, maxResults);
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1573 }
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1574
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1575 FormatLog(target, exported, "Exports", done, since, false, -1);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1576 }
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1577
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1578
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1579 void ServerIndex::GetLastExportedResource(Json::Value& target)
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1580 {
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1581 std::list<ExportedResource> exported;
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1582
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1583 {
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1584 boost::mutex::scoped_lock lock(mutex_);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1585 db_.GetLastExportedResource(exported);
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1586 }
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1587
3105
2e1711f80f74 More consistent handling of the "Last" field returned by the "/changes" URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3094
diff changeset
1588 FormatLog(target, exported, "Exports", true, 0, false, -1);
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1589 }
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1590
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1591
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1592 bool ServerIndex::IsRecyclingNeeded(uint64_t instanceSize)
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1593 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1594 if (maximumStorageSize_ != 0)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1595 {
3020
d207f6ac1f86 tracking disk size by the database engine to ensure consistency across transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3019
diff changeset
1596 assert(maximumStorageSize_ >= instanceSize);
d207f6ac1f86 tracking disk size by the database engine to ensure consistency across transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3019
diff changeset
1597
d207f6ac1f86 tracking disk size by the database engine to ensure consistency across transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3019
diff changeset
1598 if (db_.IsDiskSizeAbove(maximumStorageSize_ - instanceSize))
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1599 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1600 return true;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1601 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1602 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1603
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1604 if (maximumPatients_ != 0)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1605 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1606 uint64_t patientCount = db_.GetResourceCount(ResourceType_Patient);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1607 if (patientCount > maximumPatients_)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1608 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1609 return true;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1610 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1611 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1612
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1613 return false;
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1614 }
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1615
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1616
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1617 void ServerIndex::Recycle(uint64_t instanceSize,
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1618 const std::string& newPatientId)
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1619 {
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1620 if (!IsRecyclingNeeded(instanceSize))
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1621 {
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1622 return;
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1623 }
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1624
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1625 // Check whether other DICOM instances from this patient are
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1626 // already stored
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1627 int64_t patientToAvoid;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1628 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1629 bool hasPatientToAvoid = db_.LookupResource(patientToAvoid, type, newPatientId);
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1630
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1631 if (hasPatientToAvoid && type != ResourceType_Patient)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1632 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1633 throw OrthancException(ErrorCode_InternalError);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1634 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1635
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1636 // Iteratively select patient to remove until there is enough
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1637 // space in the DICOM store
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1638 int64_t patientToRecycle;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1639 while (true)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1640 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1641 // If other instances of this patient are already in the store,
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1642 // we must avoid to recycle them
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1643 bool ok = hasPatientToAvoid ?
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1644 db_.SelectPatientToRecycle(patientToRecycle, patientToAvoid) :
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1645 db_.SelectPatientToRecycle(patientToRecycle);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1646
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1647 if (!ok)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1648 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1649 throw OrthancException(ErrorCode_FullStorage);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1650 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1651
4268
0ae2ca210077 new macro TLOG() to replace VLOG() for trace logs with a category
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4263
diff changeset
1652 LOG(TRACE) << "Recycling one patient";
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1653 db_.DeleteResource(patientToRecycle);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1654
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1655 if (!IsRecyclingNeeded(instanceSize))
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1656 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1657 // OK, we're done
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1658 break;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1659 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1660 }
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1661 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1662
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1663 void ServerIndex::SetMaximumPatientCount(unsigned int count)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1664 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1665 boost::mutex::scoped_lock lock(mutex_);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1666 maximumPatients_ = count;
270
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1667
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1668 if (count == 0)
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1669 {
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1670 LOG(WARNING) << "No limit on the number of stored patients";
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1671 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1672 else
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1673 {
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1674 LOG(WARNING) << "At most " << count << " patients will be stored";
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1675 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1676
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1677 StandaloneRecycling();
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1678 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1679
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1680 void ServerIndex::SetMaximumStorageSize(uint64_t size)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1681 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1682 boost::mutex::scoped_lock lock(mutex_);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1683 maximumStorageSize_ = size;
270
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1684
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1685 if (size == 0)
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1686 {
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1687 LOG(WARNING) << "No limit on the size of the storage area";
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1688 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1689 else
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1690 {
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1691 LOG(WARNING) << "At most " << (size / MEGA_BYTES) << "MB will be used for the storage area";
270
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1692 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1693
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1694 StandaloneRecycling();
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1695 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1696
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
1697
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1698 void ServerIndex::StandaloneRecycling()
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1699 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1700 // WARNING: No mutex here, do not include this as a public method
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
1701 Transaction t(*this);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1702 Recycle(0, "");
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
1703 t.Commit(0);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1704 }
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1705
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1706
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1707 bool ServerIndex::IsProtectedPatient(const std::string& publicId)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1708 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1709 boost::mutex::scoped_lock lock(mutex_);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1710
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1711 // Lookup for the requested resource
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1712 int64_t id;
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1713 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1714 if (!db_.LookupResource(id, type, publicId) ||
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1715 type != ResourceType_Patient)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1716 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1717 throw OrthancException(ErrorCode_ParameterOutOfRange);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1718 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1719
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1720 return db_.IsProtectedPatient(id);
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1721 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1722
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1723
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1724 void ServerIndex::SetProtectedPatient(const std::string& publicId,
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1725 bool isProtected)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1726 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1727 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1728 Transaction transaction(*this);
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1729
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1730 // Lookup for the requested resource
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1731 int64_t id;
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1732 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1733 if (!db_.LookupResource(id, type, publicId) ||
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1734 type != ResourceType_Patient)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1735 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1736 throw OrthancException(ErrorCode_ParameterOutOfRange);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1737 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1738
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1739 db_.SetProtectedPatient(id, isProtected);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1740 transaction.Commit(0);
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1741
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1742 if (isProtected)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1743 LOG(INFO) << "Patient " << publicId << " has been protected";
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1744 else
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1745 LOG(INFO) << "Patient " << publicId << " has been unprotected";
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1746 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1747
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1748
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1749 void ServerIndex::GetChildren(std::list<std::string>& result,
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1750 const std::string& publicId)
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1751 {
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1752 result.clear();
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1753
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1754 boost::mutex::scoped_lock lock(mutex_);
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1755
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1756 ResourceType type;
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1757 int64_t resource;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1758 if (!db_.LookupResource(resource, type, publicId))
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1759 {
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1760 throw OrthancException(ErrorCode_UnknownResource);
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1761 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1762
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1763 if (type == ResourceType_Instance)
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1764 {
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1765 // An instance cannot have a child
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1766 throw OrthancException(ErrorCode_BadParameterType);
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1767 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1768
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1769 std::list<int64_t> tmp;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1770 db_.GetChildrenInternalId(tmp, resource);
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1771
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1772 for (std::list<int64_t>::const_iterator
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1773 it = tmp.begin(); it != tmp.end(); ++it)
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1774 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1775 result.push_back(db_.GetPublicId(*it));
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1776 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1777 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1778
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1779
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1780 void ServerIndex::GetChildInstances(std::list<std::string>& result,
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1781 const std::string& publicId)
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1782 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1783 result.clear();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1784
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1785 boost::mutex::scoped_lock lock(mutex_);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1786
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1787 ResourceType type;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1788 int64_t top;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1789 if (!db_.LookupResource(top, type, publicId))
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1790 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1791 throw OrthancException(ErrorCode_UnknownResource);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1792 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1793
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1794 if (type == ResourceType_Instance)
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1795 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1796 // The resource is already an instance: Do not go down the hierarchy
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1797 result.push_back(publicId);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1798 return;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1799 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1800
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1801 std::stack<int64_t> toExplore;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1802 toExplore.push(top);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1803
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1804 std::list<int64_t> tmp;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1805
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1806 while (!toExplore.empty())
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1807 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1808 // Get the internal ID of the current resource
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1809 int64_t resource = toExplore.top();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1810 toExplore.pop();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1811
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1812 if (db_.GetResourceType(resource) == ResourceType_Instance)
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1813 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1814 result.push_back(db_.GetPublicId(resource));
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1815 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1816 else
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1817 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1818 // Tag all the children of this resource as to be explored
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1819 db_.GetChildrenInternalId(tmp, resource);
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1820 for (std::list<int64_t>::const_iterator
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
1821 it = tmp.begin(); it != tmp.end(); ++it)
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1822 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1823 toExplore.push(*it);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1824 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1825 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1826 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1827 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1828
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1829
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1830 void ServerIndex::SetMetadata(const std::string& publicId,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1831 MetadataType type,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1832 const std::string& value)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1833 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1834 boost::mutex::scoped_lock lock(mutex_);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1835 Transaction t(*this);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1836
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1837 ResourceType rtype;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1838 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1839 if (!db_.LookupResource(id, rtype, publicId))
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1840 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1841 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1842 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1843
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1844 db_.SetMetadata(id, type, value);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1845
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1846 if (IsUserMetadata(type))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1847 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1848 LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1849 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1850
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1851 t.Commit(0);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1852 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1853
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1854
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1855 void ServerIndex::DeleteMetadata(const std::string& publicId,
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1856 MetadataType type)
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1857 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1858 boost::mutex::scoped_lock lock(mutex_);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1859 Transaction t(*this);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1860
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1861 ResourceType rtype;
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1862 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1863 if (!db_.LookupResource(id, rtype, publicId))
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1864 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1865 throw OrthancException(ErrorCode_UnknownResource);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1866 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1867
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1868 db_.DeleteMetadata(id, type);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1869
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1870 if (IsUserMetadata(type))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1871 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1872 LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1873 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1874
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1875 t.Commit(0);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1876 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1877
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1878
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1879 bool ServerIndex::LookupMetadata(std::string& target,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1880 const std::string& publicId,
4460
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1881 ResourceType expectedType,
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1882 MetadataType type)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1883 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1884 boost::mutex::scoped_lock lock(mutex_);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1885
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1886 ResourceType rtype;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1887 int64_t id;
4460
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1888 if (!db_.LookupResource(id, rtype, publicId) ||
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1889 rtype != expectedType)
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1890 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1891 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1892 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1893
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1894 return db_.LookupMetadata(target, id, type);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1895 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1896
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1897
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1898 void ServerIndex::GetAllMetadata(std::map<MetadataType, std::string>& target,
4460
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1899 const std::string& publicId,
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1900 ResourceType expectedType)
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1901 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1902 boost::mutex::scoped_lock lock(mutex_);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1903
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1904 ResourceType type;
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1905 int64_t id;
4460
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1906 if (!db_.LookupResource(id, type, publicId) ||
6831de40acd9 New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1907 expectedType != type)
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1908 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1909 throw OrthancException(ErrorCode_UnknownResource);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1910 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1911
3187
4bbadcd03966 refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
1912 return db_.GetAllMetadata(target, id);
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1913 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1914
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1915
697
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1916 void ServerIndex::ListAvailableAttachments(std::list<FileContentType>& target,
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1917 const std::string& publicId,
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1918 ResourceType expectedType)
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1919 {
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1920 boost::mutex::scoped_lock lock(mutex_);
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1921
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1922 ResourceType type;
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1923 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1924 if (!db_.LookupResource(id, type, publicId) ||
697
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1925 expectedType != type)
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1926 {
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1927 throw OrthancException(ErrorCode_UnknownResource);
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1928 }
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1929
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1930 db_.ListAvailableAttachments(target, id);
697
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1931 }
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1932
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1933
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1934 bool ServerIndex::LookupParent(std::string& target,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1935 const std::string& publicId)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1936 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1937 boost::mutex::scoped_lock lock(mutex_);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1938
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1939 ResourceType type;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1940 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1941 if (!db_.LookupResource(id, type, publicId))
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1942 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1943 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1944 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1945
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1946 int64_t parentId;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1947 if (db_.LookupParent(parentId, id))
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1948 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1949 target = db_.GetPublicId(parentId);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1950 return true;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1951 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1952 else
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1953 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1954 return false;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1955 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1956 }
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1957
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1958
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1959 uint64_t ServerIndex::IncrementGlobalSequence(GlobalProperty sequence)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1960 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1961 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1962 Transaction transaction(*this);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1963
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1964 uint64_t seq = IncrementGlobalSequenceInternal(sequence);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1965 transaction.Commit(0);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1966
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1967 return seq;
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1968 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1969
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1970
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1971
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1972 void ServerIndex::LogChange(ChangeType changeType,
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1973 const std::string& publicId)
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1974 {
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1975 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1976 Transaction transaction(*this);
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1977
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1978 int64_t id;
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1979 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1980 if (!db_.LookupResource(id, type, publicId))
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1981 {
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1982 throw OrthancException(ErrorCode_UnknownResource);
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1983 }
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1984
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1985 LogChange(id, changeType, type, publicId);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1986 transaction.Commit(0);
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1987 }
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1988
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1989
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1990 void ServerIndex::DeleteChanges()
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1991 {
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1992 boost::mutex::scoped_lock lock(mutex_);
3315
8bf33fa68435 Fix missing DB transactions in some write operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3187
diff changeset
1993
8bf33fa68435 Fix missing DB transactions in some write operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3187
diff changeset
1994 Transaction transaction(*this);
1286
b4acdb37e43b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1271
diff changeset
1995 db_.ClearChanges();
3315
8bf33fa68435 Fix missing DB transactions in some write operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3187
diff changeset
1996 transaction.Commit(0);
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1997 }
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1998
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1999 void ServerIndex::DeleteExportedResources()
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
2000 {
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
2001 boost::mutex::scoped_lock lock(mutex_);
3315
8bf33fa68435 Fix missing DB transactions in some write operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3187
diff changeset
2002
8bf33fa68435 Fix missing DB transactions in some write operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3187
diff changeset
2003 Transaction transaction(*this);
1286
b4acdb37e43b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1271
diff changeset
2004 db_.ClearExportedResources();
3315
8bf33fa68435 Fix missing DB transactions in some write operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3187
diff changeset
2005 transaction.Commit(0);
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
2006 }
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2007
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2008
3174
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2009 void ServerIndex::GetResourceStatistics(/* out */ ResourceType& type,
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2010 /* out */ uint64_t& diskSize,
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2011 /* out */ uint64_t& uncompressedSize,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2012 /* out */ unsigned int& countStudies,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2013 /* out */ unsigned int& countSeries,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2014 /* out */ unsigned int& countInstances,
2987
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2015 /* out */ uint64_t& dicomDiskSize,
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2016 /* out */ uint64_t& dicomUncompressedSize,
3174
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2017 const std::string& publicId)
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2018 {
3174
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2019 boost::mutex::scoped_lock lock(mutex_);
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2020
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2021 int64_t top;
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2022 if (!db_.LookupResource(top, type, publicId))
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2023 {
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2024 throw OrthancException(ErrorCode_UnknownResource);
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2025 }
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2026
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2027 std::stack<int64_t> toExplore;
3174
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3105
diff changeset
2028 toExplore.push(top);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2029
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2030 countInstances = 0;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2031 countSeries = 0;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2032 countStudies = 0;
2987
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2033 diskSize = 0;
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2034 uncompressedSize = 0;
2987
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2035 dicomDiskSize = 0;
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2036 dicomUncompressedSize = 0;
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2037
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2038 while (!toExplore.empty())
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2039 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2040 // Get the internal ID of the current resource
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2041 int64_t resource = toExplore.top();
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2042 toExplore.pop();
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2043
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2044 ResourceType thisType = db_.GetResourceType(resource);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2045
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2046 std::list<FileContentType> f;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2047 db_.ListAvailableAttachments(f, resource);
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2048
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2049 for (std::list<FileContentType>::const_iterator
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2050 it = f.begin(); it != f.end(); ++it)
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2051 {
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2052 FileInfo attachment;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2053 if (db_.LookupAttachment(attachment, resource, *it))
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2054 {
2987
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2055 if (attachment.GetContentType() == FileContentType_Dicom)
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2056 {
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2057 dicomDiskSize += attachment.GetCompressedSize();
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2058 dicomUncompressedSize += attachment.GetUncompressedSize();
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2059 }
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2060
96089d1aba4d New "DicomDiskSize" and "DicomUncompressedSize" fields in statistics about resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2940
diff changeset
2061 diskSize += attachment.GetCompressedSize();
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2062 uncompressedSize += attachment.GetUncompressedSize();
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2063 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2064 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2065
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2066 if (thisType == ResourceType_Instance)
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2067 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2068 countInstances++;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2069 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2070 else
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2071 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2072 switch (thisType)
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2073 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2074 case ResourceType_Study:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2075 countStudies++;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2076 break;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2077
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2078 case ResourceType_Series:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2079 countSeries++;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2080 break;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2081
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2082 default:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2083 break;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2084 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2085
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2086 // Tag all the children of this resource as to be explored
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2087 std::list<int64_t> tmp;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2088 db_.GetChildrenInternalId(tmp, resource);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2089 for (std::list<int64_t>::const_iterator
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
2090 it = tmp.begin(); it != tmp.end(); ++it)
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2091 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2092 toExplore.push(*it);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2093 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2094 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2095 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
2096
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2097 if (countStudies == 0)
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2098 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2099 countStudies = 1;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2100 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2101
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2102 if (countSeries == 0)
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2103 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2104 countSeries = 1;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2105 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2106 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2107
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
2108
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
2109 void ServerIndex::UnstableResourcesMonitorThread(ServerIndex* that,
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
2110 unsigned int threadSleep)
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2111 {
2940
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
2112 int stableAge;
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
2113
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
2114 {
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
2115 OrthancConfiguration::ReaderLock lock;
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
2116 stableAge = lock.GetConfiguration().GetUnsignedIntegerParameter("StableAge", 60);
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
2117 }
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
2118
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2119 if (stableAge <= 0)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2120 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2121 stableAge = 60;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2122 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2123
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2124 LOG(INFO) << "Starting the monitor for stable resources (stable age = " << stableAge << ")";
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2125
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2126 while (!that->done_)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2127 {
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
2128 // Check for stable resources each few seconds
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
2129 boost::this_thread::sleep(boost::posix_time::milliseconds(threadSleep));
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2130
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2131 boost::mutex::scoped_lock lock(that->mutex_);
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2132
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2133 while (!that->unstableResources_.IsEmpty() &&
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2134 that->unstableResources_.GetOldestPayload().GetAge() > static_cast<unsigned int>(stableAge))
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2135 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2136 // This DICOM resource has not received any new instance for
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2137 // some time. It can be considered as stable.
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2138
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2139 UnstableResourcePayload payload;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2140 int64_t id = that->unstableResources_.RemoveOldest(payload);
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2141
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2142 // Ensure that the resource is still existing before logging the change
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2143 if (that->db_.IsExistingResource(id))
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2144 {
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
2145 switch (payload.GetResourceType())
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2146 {
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
2147 case ResourceType_Patient:
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
2148 that->LogChange(id, ChangeType_StablePatient, ResourceType_Patient, payload.GetPublicId());
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2149 break;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2150
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
2151 case ResourceType_Study:
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
2152 that->LogChange(id, ChangeType_StableStudy, ResourceType_Study, payload.GetPublicId());
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2153 break;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2154
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
2155 case ResourceType_Series:
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
2156 that->LogChange(id, ChangeType_StableSeries, ResourceType_Series, payload.GetPublicId());
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2157 break;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2158
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2159 default:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2160 throw OrthancException(ErrorCode_InternalError);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2161 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2162
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
2163 //LOG(INFO) << "Stable resource: " << EnumerationToString(payload.type_) << " " << id;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2164 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2165 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2166 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2167
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2168 LOG(INFO) << "Closing the monitor thread for stable resources";
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2169 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2170
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2171
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2172 void ServerIndex::MarkAsUnstable(int64_t id,
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
2173 Orthanc::ResourceType type,
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
2174 const std::string& publicId)
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2175 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2176 // WARNING: Before calling this method, "mutex_" must be locked.
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2177
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2178 assert(type == Orthanc::ResourceType_Patient ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2179 type == Orthanc::ResourceType_Study ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2180 type == Orthanc::ResourceType_Series);
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2181
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
2182 UnstableResourcePayload payload(type, publicId);
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
2183 unstableResources_.AddOrMakeMostRecent(id, payload);
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2184 //LOG(INFO) << "Unstable resource: " << EnumerationToString(type) << " " << id;
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1177
diff changeset
2185
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
2186 LogChange(id, ChangeType_NewChildInstance, type, publicId);
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2187 }
521
2c739f76d0bb lookup tag values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 513
diff changeset
2188
2c739f76d0bb lookup tag values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 513
diff changeset
2189
2c739f76d0bb lookup tag values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 513
diff changeset
2190
3034
54e422fe31ce moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3033
diff changeset
2191 void ServerIndex::LookupIdentifierExact(std::vector<std::string>& result,
1728
4941494b5dd8 rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1727
diff changeset
2192 ResourceType level,
4941494b5dd8 rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1727
diff changeset
2193 const DicomTag& tag,
4941494b5dd8 rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1727
diff changeset
2194 const std::string& value)
615
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2195 {
1727
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
2196 assert((level == ResourceType_Patient && tag == DICOM_TAG_PATIENT_ID) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
2197 (level == ResourceType_Study && tag == DICOM_TAG_STUDY_INSTANCE_UID) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
2198 (level == ResourceType_Study && tag == DICOM_TAG_ACCESSION_NUMBER) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
2199 (level == ResourceType_Series && tag == DICOM_TAG_SERIES_INSTANCE_UID) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
2200 (level == ResourceType_Instance && tag == DICOM_TAG_SOP_INSTANCE_UID));
1725
a7c05bbfaf6a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1721
diff changeset
2201
615
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2202 result.clear();
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2203
3034
54e422fe31ce moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3033
diff changeset
2204 DicomTagConstraint c(tag, ConstraintType_Equal, value, true, true);
54e422fe31ce moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3033
diff changeset
2205
54e422fe31ce moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3033
diff changeset
2206 std::vector<DatabaseConstraint> query;
3073
0e9d1731b1b0 refactoring to reuse DatabaseConstraint in separate projects
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3061
diff changeset
2207 query.push_back(c.ConvertToDatabaseConstraint(level, DicomTagType_Identifier));
3034
54e422fe31ce moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3033
diff changeset
2208
3075
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2209 std::list<std::string> tmp;
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2210
3034
54e422fe31ce moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3033
diff changeset
2211 {
54e422fe31ce moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3033
diff changeset
2212 boost::mutex::scoped_lock lock(mutex_);
3075
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2213 db_.ApplyLookupResources(tmp, NULL, query, level, 0);
3034
54e422fe31ce moving LookupResource to graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3033
diff changeset
2214 }
3075
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2215
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2216 CopyListToVector(result, tmp);
615
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2217 }
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2218
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2219
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2220 StoreStatus ServerIndex::AddAttachment(const FileInfo& attachment,
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2221 const std::string& publicId)
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2222 {
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2223 boost::mutex::scoped_lock lock(mutex_);
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2224
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2225 Transaction t(*this);
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2226
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2227 ResourceType resourceType;
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2228 int64_t resourceId;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
2229 if (!db_.LookupResource(resourceId, resourceType, publicId))
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2230 {
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2231 return StoreStatus_Failure; // Inexistent resource
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2232 }
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2233
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2234 // Remove possible previous attachment
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2235 db_.DeleteAttachment(resourceId, attachment.GetContentType());
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2236
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2237 // Locate the patient of the target resource
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2238 int64_t patientId = resourceId;
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2239 for (;;)
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2240 {
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2241 int64_t parent;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2242 if (db_.LookupParent(parent, patientId))
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2243 {
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2244 // We have not reached the patient level yet
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2245 patientId = parent;
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2246 }
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2247 else
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2248 {
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2249 // We have reached the patient level
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2250 break;
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2251 }
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2252 }
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2253
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2254 // Possibly apply the recycling mechanism while preserving this patient
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2255 assert(db_.GetResourceType(patientId) == ResourceType_Patient);
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2256 Recycle(attachment.GetCompressedSize(), db_.GetPublicId(patientId));
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2257
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2258 db_.AddAttachment(resourceId, attachment);
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2259
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2260 if (IsUserContentType(attachment.GetContentType()))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2261 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2262 LogChange(resourceId, ChangeType_UpdatedAttachment, resourceType, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2263 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2264
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2265 t.Commit(attachment.GetCompressedSize());
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2266
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2267 return StoreStatus_Success;
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2268 }
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2269
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2270
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2271 void ServerIndex::DeleteAttachment(const std::string& publicId,
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2272 FileContentType type)
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2273 {
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2274 boost::mutex::scoped_lock lock(mutex_);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2275 Transaction t(*this);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2276
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2277 ResourceType rtype;
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2278 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
2279 if (!db_.LookupResource(id, rtype, publicId))
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2280 {
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2281 throw OrthancException(ErrorCode_UnknownResource);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2282 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2283
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2284 db_.DeleteAttachment(id, type);
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2285
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2286 if (IsUserContentType(type))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2287 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2288 LogChange(id, ChangeType_UpdatedAttachment, rtype, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2289 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2290
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2291 t.Commit(0);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2292 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2293
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2294
1249
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2295 void ServerIndex::SetGlobalProperty(GlobalProperty property,
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2296 const std::string& value)
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2297 {
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2298 boost::mutex::scoped_lock lock(mutex_);
3315
8bf33fa68435 Fix missing DB transactions in some write operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3187
diff changeset
2299
8bf33fa68435 Fix missing DB transactions in some write operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3187
diff changeset
2300 Transaction transaction(*this);
1249
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2301 db_.SetGlobalProperty(property, value);
3315
8bf33fa68435 Fix missing DB transactions in some write operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3187
diff changeset
2302 transaction.Commit(0);
1249
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2303 }
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2304
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2305
2668
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2306 bool ServerIndex::LookupGlobalProperty(std::string& value,
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2307 GlobalProperty property)
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2308 {
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2309 boost::mutex::scoped_lock lock(mutex_);
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2310 return db_.LookupGlobalProperty(value, property);
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2311 }
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2312
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2313
1218
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2314 std::string ServerIndex::GetGlobalProperty(GlobalProperty property,
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2315 const std::string& defaultValue)
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2316 {
1239
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2317 std::string value;
2668
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2318
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2319 if (LookupGlobalProperty(value, property))
1239
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2320 {
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2321 return value;
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2322 }
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2323 else
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2324 {
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2325 return defaultValue;
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2326 }
1218
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2327 }
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2328
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2329
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2330 bool ServerIndex::GetMainDicomTags(DicomMap& result,
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2331 const std::string& publicId,
1677
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2332 ResourceType expectedType,
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2333 ResourceType levelOfInterest)
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2334 {
1677
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2335 // Yes, the following test could be shortened, but we wish to make it as clear as possible
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2336 if (!(expectedType == ResourceType_Patient && levelOfInterest == ResourceType_Patient) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2337 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Patient) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2338 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Study) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2339 !(expectedType == ResourceType_Series && levelOfInterest == ResourceType_Series) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2340 !(expectedType == ResourceType_Instance && levelOfInterest == ResourceType_Instance))
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2341 {
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2342 throw OrthancException(ErrorCode_ParameterOutOfRange);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2343 }
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2344
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2345 result.Clear();
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2346
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2347 boost::mutex::scoped_lock lock(mutex_);
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2348
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2349 // Lookup for the requested resource
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2350 int64_t id;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2351 ResourceType type;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2352 if (!db_.LookupResource(id, type, publicId) ||
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2353 type != expectedType)
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2354 {
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2355 return false;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2356 }
1677
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2357
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2358 if (type == ResourceType_Study)
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2359 {
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2360 DicomMap tmp;
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2361 db_.GetMainDicomTags(tmp, id);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2362
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2363 switch (levelOfInterest)
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2364 {
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2365 case ResourceType_Patient:
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2366 tmp.ExtractPatientInformation(result);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2367 return true;
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2368
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2369 case ResourceType_Study:
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2370 tmp.ExtractStudyInformation(result);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2371 return true;
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2372
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2373 default:
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2374 throw OrthancException(ErrorCode_InternalError);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2375 }
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2376 }
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2377 else
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2378 {
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2379 db_.GetMainDicomTags(result, id);
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2380 return true;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2381 }
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2382 }
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2383
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2384
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2385 bool ServerIndex::GetAllMainDicomTags(DicomMap& result,
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2386 const std::string& instancePublicId)
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2387 {
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2388 result.Clear();
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2389
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2390 boost::mutex::scoped_lock lock(mutex_);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2391
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2392 // Lookup for the requested resource
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2393 int64_t instance;
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2394 ResourceType type;
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2395 if (!db_.LookupResource(instance, type, instancePublicId) ||
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2396 type != ResourceType_Instance)
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2397 {
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2398 return false;
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2399 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2400 else
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2401 {
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2402 DicomMap tmp;
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2403
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2404 db_.GetMainDicomTags(tmp, instance);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2405 result.Merge(tmp);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2406
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2407 int64_t series;
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2408 if (!db_.LookupParent(series, instance))
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2409 {
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2410 throw OrthancException(ErrorCode_InternalError);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2411 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2412
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2413 tmp.Clear();
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2414 db_.GetMainDicomTags(tmp, series);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2415 result.Merge(tmp);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2416
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2417 int64_t study;
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2418 if (!db_.LookupParent(study, series))
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2419 {
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2420 throw OrthancException(ErrorCode_InternalError);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2421 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2422
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2423 tmp.Clear();
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2424 db_.GetMainDicomTags(tmp, study);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2425 result.Merge(tmp);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2426
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2427 #ifndef NDEBUG
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2428 {
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2429 // Sanity test to check that all the main DICOM tags from the
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2430 // patient level are copied at the study level
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2431
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2432 int64_t patient;
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2433 if (!db_.LookupParent(patient, study))
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2434 {
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2435 throw OrthancException(ErrorCode_InternalError);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2436 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2437
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2438 tmp.Clear();
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2439 db_.GetMainDicomTags(tmp, study);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2440
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2441 std::set<DicomTag> patientTags;
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2442 tmp.GetTags(patientTags);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2443
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2444 for (std::set<DicomTag>::const_iterator
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2445 it = patientTags.begin(); it != patientTags.end(); ++it)
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2446 {
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2447 assert(result.HasTag(*it));
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2448 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2449 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2450 #endif
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2451
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2452 return true;
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2453 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2454 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2455
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2987
diff changeset
2456
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2457 bool ServerIndex::LookupResourceType(ResourceType& type,
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2458 const std::string& publicId)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2459 {
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2460 boost::mutex::scoped_lock lock(mutex_);
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2461
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2462 int64_t id;
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2463 return db_.LookupResource(id, type, publicId);
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2464 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2465
1668
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2466
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2467 unsigned int ServerIndex::GetDatabaseVersion()
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2468 {
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2469 boost::mutex::scoped_lock lock(mutex_);
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2470 return db_.GetDatabaseVersion();
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2471 }
1750
55d52567bebb LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1747
diff changeset
2472
55d52567bebb LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1747
diff changeset
2473
1898
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2474 bool ServerIndex::LookupParent(std::string& target,
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2475 const std::string& publicId,
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2476 ResourceType parentType)
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2477 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2478 boost::mutex::scoped_lock lock(mutex_);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2479
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2480 ResourceType type;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2481 int64_t id;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2482 if (!db_.LookupResource(id, type, publicId))
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2483 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2484 throw OrthancException(ErrorCode_UnknownResource);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2485 }
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2486
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2487 while (type != parentType)
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2488 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2489 int64_t parentId;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2490
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2491 if (type == ResourceType_Patient || // Cannot further go up in hierarchy
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2492 !db_.LookupParent(parentId, id))
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2493 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2494 return false;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2495 }
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2496
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2497 id = parentId;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2498 type = GetParentResourceType(type);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2499 }
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2500
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2501 target = db_.GetPublicId(id);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2502 return true;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2503 }
2209
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2504
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2505
4205
d962a2996637 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4140
diff changeset
2506 void ServerIndex::ReconstructInstance(const ParsedDicomFile& dicom)
2209
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2507 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2508 DicomMap summary;
4140
0ddc5297a8ab centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4139
diff changeset
2509 OrthancConfiguration::DefaultExtractDicomSummary(summary, dicom);
2209
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2510
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2511 DicomInstanceHasher hasher(summary);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2512
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2513 boost::mutex::scoped_lock lock(mutex_);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2514
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2515 try
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2516 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2517 Transaction t(*this);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2518
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2519 int64_t patient = -1, study = -1, series = -1, instance = -1;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2520
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2521 ResourceType dummy;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2522 if (!db_.LookupResource(patient, dummy, hasher.HashPatient()) ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2523 !db_.LookupResource(study, dummy, hasher.HashStudy()) ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2524 !db_.LookupResource(series, dummy, hasher.HashSeries()) ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2525 !db_.LookupResource(instance, dummy, hasher.HashInstance()) ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2526 patient == -1 ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2527 study == -1 ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2528 series == -1 ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2529 instance == -1)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2530 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2531 throw OrthancException(ErrorCode_InternalError);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2532 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2533
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2534 db_.ClearMainDicomTags(patient);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2535 db_.ClearMainDicomTags(study);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2536 db_.ClearMainDicomTags(series);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2537 db_.ClearMainDicomTags(instance);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2538
3083
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
2539 {
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
2540 ResourcesContent content;
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
2541 content.AddResource(patient, ResourceType_Patient, summary);
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
2542 content.AddResource(study, ResourceType_Study, summary);
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
2543 content.AddResource(series, ResourceType_Series, summary);
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
2544 content.AddResource(instance, ResourceType_Instance, summary);
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
2545 db_.SetResourcesContent(content);
683d572424b6 IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3082
diff changeset
2546 }
2209
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2547
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2548 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2549 std::string s;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2550 if (dicom.LookupTransferSyntax(s))
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2551 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2552 db_.SetMetadata(instance, MetadataType_Instance_TransferSyntax, s);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2553 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2554 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2555
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2556 const DicomValue* value;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2557 if ((value = summary.TestAndGetValue(DICOM_TAG_SOP_CLASS_UID)) != NULL &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2558 !value->IsNull() &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2559 !value->IsBinary())
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2560 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2561 db_.SetMetadata(instance, MetadataType_Instance_SopClassUid, value->GetContent());
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2562 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2563
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2564 t.Commit(0); // No change in the DB size
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2565 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2566 catch (OrthancException& e)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2567 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2568 LOG(ERROR) << "EXCEPTION [" << e.What() << "]";
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2569 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2570 }
3025
039a9d262d64 preparing to speed up find in databases
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3020
diff changeset
2571
039a9d262d64 preparing to speed up find in databases
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3020
diff changeset
2572
3029
ea653ec47f31 new class: DatabaseConstraint
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3027
diff changeset
2573 void ServerIndex::NormalizeLookup(std::vector<DatabaseConstraint>& target,
3027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2574 const DatabaseLookup& source,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2575 ResourceType queryLevel) const
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2576 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2577 assert(mainDicomTagsRegistry_.get() != NULL);
3029
ea653ec47f31 new class: DatabaseConstraint
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3027
diff changeset
2578
ea653ec47f31 new class: DatabaseConstraint
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3027
diff changeset
2579 target.clear();
ea653ec47f31 new class: DatabaseConstraint
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3027
diff changeset
2580 target.reserve(source.GetConstraintsCount());
3031
18a2d196414b simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3030
diff changeset
2581
3027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2582 for (size_t i = 0; i < source.GetConstraintsCount(); i++)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2583 {
3031
18a2d196414b simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3030
diff changeset
2584 ResourceType level;
18a2d196414b simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3030
diff changeset
2585 DicomTagType type;
3027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2586
3031
18a2d196414b simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3030
diff changeset
2587 mainDicomTagsRegistry_->LookupTag(level, type, source.GetConstraint(i).GetTag());
18a2d196414b simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3030
diff changeset
2588
18a2d196414b simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3030
diff changeset
2589 if (type == DicomTagType_Identifier ||
18a2d196414b simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3030
diff changeset
2590 type == DicomTagType_Main)
3027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2591 {
3029
ea653ec47f31 new class: DatabaseConstraint
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3027
diff changeset
2592 // Use the fact that patient-level tags are copied at the study level
3031
18a2d196414b simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3030
diff changeset
2593 if (level == ResourceType_Patient &&
18a2d196414b simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3030
diff changeset
2594 queryLevel != ResourceType_Patient)
3027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2595 {
3031
18a2d196414b simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3030
diff changeset
2596 level = ResourceType_Study;
3027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2597 }
3029
ea653ec47f31 new class: DatabaseConstraint
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3027
diff changeset
2598
3073
0e9d1731b1b0 refactoring to reuse DatabaseConstraint in separate projects
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3061
diff changeset
2599 target.push_back(source.GetConstraint(i).ConvertToDatabaseConstraint(level, type));
3027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2600 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2601 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2602 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2603
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2604
3025
039a9d262d64 preparing to speed up find in databases
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3020
diff changeset
2605 void ServerIndex::ApplyLookupResources(std::vector<std::string>& resourcesId,
3036
8fd203510d8b moving LookupIdentifierQuery to the graveyard
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3034
diff changeset
2606 std::vector<std::string>* instancesId,
3025
039a9d262d64 preparing to speed up find in databases
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3020
diff changeset
2607 const DatabaseLookup& lookup,
039a9d262d64 preparing to speed up find in databases
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3020
diff changeset
2608 ResourceType queryLevel,
039a9d262d64 preparing to speed up find in databases
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3020
diff changeset
2609 size_t limit)
039a9d262d64 preparing to speed up find in databases
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3020
diff changeset
2610 {
3029
ea653ec47f31 new class: DatabaseConstraint
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3027
diff changeset
2611 std::vector<DatabaseConstraint> normalized;
3027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2612 NormalizeLookup(normalized, lookup, queryLevel);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2613
3075
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2614 std::list<std::string> resourcesList, instancesList;
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2615
3027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2616 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2617 boost::mutex::scoped_lock lock(mutex_);
3075
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2618
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2619 if (instancesId == NULL)
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2620 {
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2621 db_.ApplyLookupResources(resourcesList, NULL, normalized, queryLevel, limit);
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2622 }
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2623 else
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2624 {
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2625 db_.ApplyLookupResources(resourcesList, &instancesList, normalized, queryLevel, limit);
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2626 }
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2627 }
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2628
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2629 CopyListToVector(resourcesId, resourcesList);
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2630
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2631 if (instancesId != NULL)
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2632 {
ead8576a02ef IDatabaseWrapper::ApplyLookupResources now returns lists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3073
diff changeset
2633 CopyListToVector(*instancesId, instancesList);
3027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
2634 }
3025
039a9d262d64 preparing to speed up find in databases
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3020
diff changeset
2635 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2636 }