Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 4834:bec432ee1094
download of numpy arrays from the REST API
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Fri, 26 Nov 2021 19:03:32 +0100 |
parents | 7053502fbf97 |
children | ec1e9571b645 |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2021 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * In addition, as a special exception, the copyright holders of this |
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14 * program give permission to link the code of its release with the |
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15 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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16 * that use the same license as the "OpenSSL" library), and distribute |
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17 * the linked executables. You must obey the GNU General Public License |
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18 * in all respects for all of the code used other than "OpenSSL". If you |
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19 * modify file(s) with this exception, you may extend this exception to |
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20 * your version of the file(s), but you are not obligated to do so. If |
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21 * you do not wish to do so, delete this exception statement from your |
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22 * version. If you delete this exception statement from all source files |
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23 * in the program, then also delete it here. |
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24 * |
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25 * This program is distributed in the hope that it will be useful, but |
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26 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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27 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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28 * General Public License for more details. |
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29 * |
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30 * You should have received a copy of the GNU General Public License |
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31 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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32 **/ |
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33 |
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34 |
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35 #include "../PrecompiledHeadersServer.h" |
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36 #include "OrthancRestApi.h" |
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37 |
4045 | 38 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
39 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
40 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
41 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
42 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
43 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
44 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
45 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
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46 #include "../../../OrthancFramework/Sources/Images/NumpyWriter.h" |
4045 | 47 #include "../../../OrthancFramework/Sources/Logging.h" |
48 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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49 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
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51 #include "../OrthancConfiguration.h" |
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52 #include "../Search/DatabaseLookup.h" |
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53 #include "../ServerContext.h" |
2131 | 54 #include "../ServerToolbox.h" |
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55 #include "../SliceOrdering.h" |
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56 |
3687 | 57 // This "include" is mandatory for Release builds using Linux Standard Base |
58 #include <boost/math/special_functions/round.hpp> | |
59 | |
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60 |
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61 /** |
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62 * This semaphore is used to limit the number of concurrent HTTP |
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63 * requests on CPU-intensive routes of the REST API, in order to |
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64 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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65 **/ |
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66 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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67 |
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68 |
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69 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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70 |
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71 static const char* const IGNORE_LENGTH = "ignore-length"; |
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72 |
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73 |
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74 namespace Orthanc |
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75 { |
4415 | 76 static std::string GetDocumentationSampleResource(ResourceType type) |
77 { | |
78 switch (type) | |
79 { | |
80 case Orthanc::ResourceType_Instance: | |
81 return "https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2"; | |
82 break; | |
83 | |
84 case Orthanc::ResourceType_Series: | |
85 return "https://demo.orthanc-server.com/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; | |
86 break; | |
87 | |
88 case Orthanc::ResourceType_Study: | |
89 return "https://demo.orthanc-server.com/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; | |
90 break; | |
91 | |
92 case Orthanc::ResourceType_Patient: | |
93 return "https://demo.orthanc-server.com/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; | |
94 break; | |
95 | |
96 default: | |
97 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
98 } | |
99 } | |
100 | |
101 | |
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102 static void AnswerDicomAsJson(RestApiCall& call, |
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103 const Json::Value& dicom, |
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104 DicomToJsonFormat mode) |
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105 { |
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106 if (mode != DicomToJsonFormat_Full) |
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107 { |
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108 Json::Value simplified; |
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109 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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110 call.GetOutput().AnswerJson(simplified); |
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111 } |
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112 else |
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113 { |
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114 call.GetOutput().AnswerJson(dicom); |
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115 } |
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116 } |
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117 |
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118 |
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119 static void ParseSetOfTags(std::set<DicomTag>& target, |
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120 const RestApiGetCall& call, |
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121 const std::string& argument) |
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122 { |
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123 target.clear(); |
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124 |
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125 if (call.HasArgument(argument)) |
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126 { |
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127 std::vector<std::string> tags; |
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128 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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129 |
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130 for (size_t i = 0; i < tags.size(); i++) |
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131 { |
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132 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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133 } |
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134 } |
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135 } |
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136 |
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137 |
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138 // List all the patients, studies, series or instances ---------------------- |
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139 |
1354 | 140 static void AnswerListOfResources(RestApiOutput& output, |
141 ServerIndex& index, | |
142 const std::list<std::string>& resources, | |
143 ResourceType level, | |
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144 bool expand, |
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145 DicomToJsonFormat format) |
1354 | 146 { |
147 Json::Value answer = Json::arrayValue; | |
148 | |
149 for (std::list<std::string>::const_iterator | |
1384 | 150 resource = resources.begin(); resource != resources.end(); ++resource) |
1354 | 151 { |
152 if (expand) | |
153 { | |
4554 | 154 Json::Value expanded; |
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155 if (index.ExpandResource(expanded, *resource, level, format)) |
1354 | 156 { |
4554 | 157 answer.append(expanded); |
1354 | 158 } |
159 } | |
160 else | |
161 { | |
162 answer.append(*resource); | |
163 } | |
164 } | |
165 | |
166 output.AnswerJson(answer); | |
167 } | |
168 | |
169 | |
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170 template <enum ResourceType resourceType> |
974 | 171 static void ListResources(RestApiGetCall& call) |
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172 { |
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173 if (call.IsDocumentation()) |
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174 { |
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175 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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176 |
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177 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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178 call.GetDocumentation() |
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179 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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180 .SetSummary("List the available " + resources) |
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181 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
4403 | 182 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
183 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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184 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
4403 | 185 "If present, retrieve detailed information about the individual " + resources, false) |
4404 | 186 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
187 "about the reported " + resources + " (if `expand` argument is provided)") | |
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188 .SetHttpGetSample("https://demo.orthanc-server.com/" + resources + "?since=0&limit=2", true); |
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189 return; |
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190 } |
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191 |
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192 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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193 |
1354 | 194 std::list<std::string> result; |
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195 |
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196 if (call.HasArgument("limit") || |
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197 call.HasArgument("since")) |
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198 { |
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199 if (!call.HasArgument("limit")) |
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200 { |
2955 | 201 throw OrthancException(ErrorCode_BadRequest, |
202 "Missing \"limit\" argument for GET request against: " + | |
203 call.FlattenUri()); | |
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204 } |
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205 |
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206 if (!call.HasArgument("since")) |
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207 { |
2955 | 208 throw OrthancException(ErrorCode_BadRequest, |
209 "Missing \"since\" argument for GET request against: " + | |
210 call.FlattenUri()); | |
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211 } |
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212 |
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213 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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214 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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215 index.GetAllUuids(result, resourceType, since, limit); |
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216 } |
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217 else |
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218 { |
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219 index.GetAllUuids(result, resourceType); |
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220 } |
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221 |
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222 AnswerListOfResources(call.GetOutput(), index, result, resourceType, call.HasArgument("expand"), |
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223 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human)); |
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224 } |
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225 |
4409 | 226 |
227 | |
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228 template <enum ResourceType resourceType> |
974 | 229 static void GetSingleResource(RestApiGetCall& call) |
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230 { |
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231 if (call.IsDocumentation()) |
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232 { |
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233 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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234 |
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235 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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236 call.GetDocumentation() |
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237 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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238 .SetSummary("Get information about some " + resource) |
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239 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
4404 | 240 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
4409 | 241 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
242 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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243 return; |
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244 } |
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245 |
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246 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
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247 |
4554 | 248 Json::Value json; |
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249 if (OrthancRestApi::GetIndex(call).ExpandResource( |
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250 json, call.GetUriComponent("id", ""), resourceType, format)) |
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251 { |
4554 | 252 call.GetOutput().AnswerJson(json); |
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253 } |
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254 } |
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255 |
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256 template <enum ResourceType resourceType> |
974 | 257 static void DeleteSingleResource(RestApiDeleteCall& call) |
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258 { |
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259 if (call.IsDocumentation()) |
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260 { |
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261 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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262 call.GetDocumentation() |
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263 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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264 .SetSummary("Delete some " + resource) |
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265 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
4404 | 266 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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267 return; |
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268 } |
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269 |
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270 Json::Value remainingAncestor; |
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271 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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272 { |
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273 call.GetOutput().AnswerJson(remainingAncestor); |
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274 } |
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275 } |
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276 |
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277 |
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278 // Get information about a single patient ----------------------------------- |
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279 |
974 | 280 static void IsProtectedPatient(RestApiGetCall& call) |
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281 { |
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282 if (call.IsDocumentation()) |
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283 { |
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284 call.GetDocumentation() |
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285 .SetTag("Patients") |
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286 .SetSummary("Is the patient protected against recycling?") |
4404 | 287 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
4403 | 288 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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289 return; |
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290 } |
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291 |
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292 std::string publicId = call.GetUriComponent("id", ""); |
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293 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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294 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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295 } |
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296 |
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297 |
974 | 298 static void SetPatientProtection(RestApiPutCall& call) |
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299 { |
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300 if (call.IsDocumentation()) |
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301 { |
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302 call.GetDocumentation() |
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303 .SetTag("Patients") |
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304 .SetSummary("Protect one patient against recycling") |
4403 | 305 .SetDescription("Check out configuration options `MaximumStorageSize` and `MaximumPatientCount`") |
4404 | 306 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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307 return; |
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308 } |
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309 |
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310 ServerContext& context = OrthancRestApi::GetContext(call); |
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311 |
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312 std::string publicId = call.GetUriComponent("id", ""); |
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313 |
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314 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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315 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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316 } |
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317 |
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318 |
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319 // Get information about a single instance ---------------------------------- |
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320 |
974 | 321 static void GetInstanceFile(RestApiGetCall& call) |
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322 { |
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323 if (call.IsDocumentation()) |
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324 { |
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325 call.GetDocumentation() |
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326 .SetTag("Instances") |
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327 .SetSummary("Download DICOM") |
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328 .SetDescription("Download one DICOM instance") |
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329 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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330 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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331 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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332 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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333 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
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334 return; |
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335 } |
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336 |
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337 ServerContext& context = OrthancRestApi::GetContext(call); |
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338 |
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339 std::string publicId = call.GetUriComponent("id", ""); |
3203
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340 |
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341 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
3203
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342 if (accept != call.GetHttpHeaders().end()) |
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343 { |
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344 // New in Orthanc 1.5.4 |
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345 try |
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346 { |
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347 MimeType mime = StringToMimeType(accept->second.c_str()); |
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348 |
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349 if (mime == MimeType_DicomWebJson || |
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350 mime == MimeType_DicomWebXml) |
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351 { |
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352 DicomWebJsonVisitor visitor; |
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353 |
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354 { |
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355 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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356 locker.GetDicom().Apply(visitor); |
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357 } |
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358 |
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359 if (mime == MimeType_DicomWebJson) |
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360 { |
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361 std::string s = visitor.GetResult().toStyledString(); |
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362 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
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363 } |
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364 else |
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365 { |
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366 std::string xml; |
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367 visitor.FormatXml(xml); |
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368 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
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369 } |
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370 |
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371 return; |
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372 } |
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373 } |
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374 catch (OrthancException&) |
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375 { |
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376 } |
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377 } |
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378 |
1146
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379 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
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380 } |
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381 |
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382 |
974 | 383 static void ExportInstanceFile(RestApiPostCall& call) |
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384 { |
4421 | 385 if (call.IsDocumentation()) |
386 { | |
387 call.GetDocumentation() | |
388 .SetTag("Instances") | |
389 .SetSummary("Write DICOM onto filesystem") | |
390 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running") | |
391 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
392 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
393 return; | |
394 } | |
395 | |
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396 ServerContext& context = OrthancRestApi::GetContext(call); |
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397 |
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398 std::string publicId = call.GetUriComponent("id", ""); |
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399 |
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400 std::string dicom; |
2124 | 401 context.ReadDicom(dicom, publicId); |
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402 |
1446
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403 std::string target; |
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404 call.BodyToString(target); |
2140 | 405 SystemToolbox::WriteFile(dicom, target); |
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406 |
2908
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407 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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408 } |
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409 |
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410 |
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411 template <DicomToJsonFormat format> |
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412 static void GetInstanceTagsInternal(RestApiGetCall& call) |
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413 { |
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414 ServerContext& context = OrthancRestApi::GetContext(call); |
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415 |
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416 std::string publicId = call.GetUriComponent("id", ""); |
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417 |
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418 std::set<DicomTag> ignoreTagLength; |
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419 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
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420 |
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421 if (format != DicomToJsonFormat_Full || |
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422 !ignoreTagLength.empty()) |
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423 { |
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424 Json::Value full; |
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425 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
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426 AnswerDicomAsJson(call, full, format); |
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427 } |
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428 else |
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429 { |
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430 // This path allows one to avoid the JSON decoding if no |
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431 // simplification is asked, and if no "ignore-length" argument |
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432 // is present |
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433 Json::Value full; |
2127 | 434 context.ReadDicomAsJson(full, publicId); |
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435 call.GetOutput().AnswerJson(full); |
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436 } |
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437 } |
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438 |
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439 |
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440 static void GetInstanceTags(RestApiGetCall& call) |
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441 { |
4404 | 442 if (call.IsDocumentation()) |
443 { | |
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444 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
4404 | 445 call.GetDocumentation() |
446 .SetTag("Instances") | |
447 .SetSummary("Get DICOM tags") | |
448 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
449 "combines hexadecimal tags with human-readable description.") | |
450 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
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451 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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452 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
4404 | 453 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
4415 | 454 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
4404 | 455 return; |
456 } | |
457 | |
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458 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
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459 { |
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460 case DicomToJsonFormat_Human: |
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461 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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462 break; |
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463 |
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464 case DicomToJsonFormat_Short: |
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465 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call); |
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466 break; |
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467 |
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468 case DicomToJsonFormat_Full: |
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469 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call); |
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470 break; |
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471 |
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472 default: |
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473 throw OrthancException(ErrorCode_InternalError); |
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474 } |
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475 } |
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476 |
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477 |
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478 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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479 { |
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480 if (call.IsDocumentation()) |
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481 { |
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482 call.GetDocumentation() |
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483 .SetTag("Instances") |
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484 .SetSummary("Get human-readable tags") |
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485 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
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486 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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487 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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488 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
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489 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
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490 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
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491 return; |
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492 } |
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493 else |
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494 { |
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495 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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496 } |
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497 } |
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498 |
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499 |
974 | 500 static void ListFrames(RestApiGetCall& call) |
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501 { |
4414 | 502 if (call.IsDocumentation()) |
503 { | |
504 call.GetDocumentation() | |
505 .SetTag("Instances") | |
506 .SetSummary("List available frames") | |
507 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
508 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
509 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
510 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); | |
511 return; | |
512 } | |
513 | |
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514 std::string publicId = call.GetUriComponent("id", ""); |
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515 |
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516 unsigned int numberOfFrames; |
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517 |
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518 { |
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519 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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520 numberOfFrames = locker.GetDicom().GetFramesCount(); |
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521 } |
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522 |
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523 Json::Value result = Json::arrayValue; |
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524 for (unsigned int i = 0; i < numberOfFrames; i++) |
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525 { |
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526 result.append(i); |
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527 } |
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528 |
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529 call.GetOutput().AnswerJson(result); |
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530 } |
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531 |
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532 |
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533 namespace |
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534 { |
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535 class ImageToEncode |
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536 { |
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537 private: |
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538 std::unique_ptr<ImageAccessor>& image_; |
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539 ImageExtractionMode mode_; |
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540 bool invert_; |
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541 MimeType format_; |
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542 std::string answer_; |
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543 |
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544 public: |
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545 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
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546 ImageExtractionMode mode, |
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547 bool invert) : |
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548 image_(image), |
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549 mode_(mode), |
4205 | 550 invert_(invert), |
551 format_(MimeType_Binary) | |
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552 { |
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553 } |
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554 |
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555 void Answer(RestApiOutput& output) |
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556 { |
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557 output.AnswerBuffer(answer_, format_); |
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558 } |
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559 |
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560 void EncodeUsingPng() |
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561 { |
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562 format_ = MimeType_Png; |
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563 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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564 } |
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565 |
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566 void EncodeUsingPam() |
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567 { |
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568 format_ = MimeType_Pam; |
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569 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
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570 } |
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571 |
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572 void EncodeUsingJpeg(uint8_t quality) |
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573 { |
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574 format_ = MimeType_Jpeg; |
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575 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
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576 } |
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577 }; |
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578 |
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579 class EncodePng : public HttpContentNegociation::IHandler |
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580 { |
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581 private: |
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582 ImageToEncode& image_; |
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583 |
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584 public: |
4205 | 585 explicit EncodePng(ImageToEncode& image) : image_(image) |
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586 { |
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587 } |
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588 |
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589 virtual void Handle(const std::string& type, |
4205 | 590 const std::string& subtype) ORTHANC_OVERRIDE |
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591 { |
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592 assert(type == "image"); |
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593 assert(subtype == "png"); |
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594 image_.EncodeUsingPng(); |
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595 } |
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596 }; |
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597 |
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598 class EncodePam : public HttpContentNegociation::IHandler |
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599 { |
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600 private: |
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601 ImageToEncode& image_; |
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602 |
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603 public: |
4205 | 604 explicit EncodePam(ImageToEncode& image) : image_(image) |
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605 { |
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606 } |
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607 |
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608 virtual void Handle(const std::string& type, |
4205 | 609 const std::string& subtype) ORTHANC_OVERRIDE |
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610 { |
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611 assert(type == "image"); |
2780 | 612 assert(subtype == "x-portable-arbitrarymap"); |
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613 image_.EncodeUsingPam(); |
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614 } |
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615 }; |
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|
616 |
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617 class EncodeJpeg : public HttpContentNegociation::IHandler |
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618 { |
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619 private: |
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620 ImageToEncode& image_; |
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621 unsigned int quality_; |
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622 |
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623 public: |
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624 EncodeJpeg(ImageToEncode& image, |
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625 const RestApiGetCall& call) : |
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626 image_(image) |
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627 { |
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628 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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629 bool ok = false; |
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630 |
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631 try |
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632 { |
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633 quality_ = boost::lexical_cast<unsigned int>(v); |
1847 | 634 ok = (quality_ >= 1 && quality_ <= 100); |
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635 } |
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636 catch (boost::bad_lexical_cast&) |
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637 { |
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638 } |
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
639 |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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diff
changeset
|
640 if (!ok) |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
641 { |
2955 | 642 throw OrthancException( |
643 ErrorCode_BadRequest, | |
644 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
645 } |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
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parents:
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diff
changeset
|
646 } |
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".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
647 |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1781
diff
changeset
|
648 virtual void Handle(const std::string& type, |
4205 | 649 const std::string& subtype) ORTHANC_OVERRIDE |
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
650 { |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
651 assert(type == "image"); |
2dbf25006f88
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
652 assert(subtype == "jpeg"); |
1902
8b0ee8d5e6d0
Refactoring leading to speedups with custom image decoders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1900
diff
changeset
|
653 image_.EncodeUsingJpeg(quality_); |
1784
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
654 } |
2dbf25006f88
".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
655 }; |
1781
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
656 } |
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1773
diff
changeset
|
657 |
5ad4e4d92ecb
AcceptMediaDispatcher bootstrap
Sebastien Jodogne <s.jodogne@gmail.com>
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1773
diff
changeset
|
658 |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
659 namespace |
3600
4066998150ef
/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
3203
diff
changeset
|
660 { |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
661 class IDecodedFrameHandler : public boost::noncopyable |
12253ddefe5a
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diff
changeset
|
662 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
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diff
changeset
|
663 public: |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
664 virtual ~IDecodedFrameHandler() |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
665 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
666 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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parents:
3640
diff
changeset
|
667 |
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
668 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
669 virtual void Handle(RestApiGetCall& call, |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
670 std::unique_ptr<ImageAccessor>& decoded, |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
671 const ParsedDicomFile* dicom, |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
672 unsigned int frame) = 0; |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
673 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
674 virtual bool RequiresDicomTags() const = 0; |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
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diff
changeset
|
675 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
676 static void Apply(RestApiGetCall& call, |
4406
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
677 IDecodedFrameHandler& handler, |
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diff
changeset
|
678 ImageExtractionMode mode /* for generation of documentation */, |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
679 bool isRendered /* for generation of documentation */) |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
680 { |
4406
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
681 if (call.IsDocumentation()) |
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diff
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|
682 { |
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|
683 std::string m; |
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diff
changeset
|
684 if (!isRendered) |
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diff
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|
685 { |
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diff
changeset
|
686 switch (mode) |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
687 { |
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diff
changeset
|
688 case ImageExtractionMode_Preview: |
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parents:
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diff
changeset
|
689 m = "preview"; |
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diff
changeset
|
690 break; |
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diff
changeset
|
691 case ImageExtractionMode_UInt8: |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
692 m = "uint8"; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
693 break; |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
694 case ImageExtractionMode_UInt16: |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
695 m = "uint16"; |
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
696 break; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
697 case ImageExtractionMode_Int16: |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
698 m = "int16"; |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
699 break; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
700 default: |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
701 throw OrthancException(ErrorCode_ParameterOutOfRange); |
4cb9f66a1c7c
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parents:
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diff
changeset
|
702 } |
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
703 } |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
704 |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
705 std::string description; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
706 std::string verb = (isRendered ? "Render" : "Decode"); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
707 |
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
708 if (call.HasUriComponent("frame")) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
709 { |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
710 description = verb + " one frame of interest from the given DICOM instance."; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
711 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
712 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
713 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
714 } |
4cb9f66a1c7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
715 else |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
716 { |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
717 description = verb + " the first frame of the given DICOM instance."; |
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
718 call.GetDocumentation() |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
719 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
720 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
721 |
4cb9f66a1c7c
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parents:
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diff
changeset
|
722 if (isRendered) |
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
723 { |
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
724 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
725 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
726 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
727 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
728 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
729 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
730 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
731 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
732 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
733 } |
4cb9f66a1c7c
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parents:
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diff
changeset
|
734 else |
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
735 { |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
736 switch (mode) |
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
737 { |
4cb9f66a1c7c
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parents:
4405
diff
changeset
|
738 case ImageExtractionMode_Preview: |
4cb9f66a1c7c
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parents:
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diff
changeset
|
739 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
740 break; |
4cb9f66a1c7c
documenting generation of images
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4405
diff
changeset
|
741 case ImageExtractionMode_UInt8: |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
742 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
743 break; |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
744 case ImageExtractionMode_UInt16: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
745 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
746 break; |
4cb9f66a1c7c
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parents:
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diff
changeset
|
747 case ImageExtractionMode_Int16: |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
748 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
4cb9f66a1c7c
documenting generation of images
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parents:
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diff
changeset
|
749 "Negative values must be interpreted according to two's complement."); |
4cb9f66a1c7c
documenting generation of images
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parents:
4405
diff
changeset
|
750 break; |
4cb9f66a1c7c
documenting generation of images
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diff
changeset
|
751 default: |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
752 throw OrthancException(ErrorCode_ParameterOutOfRange); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
753 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
754 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
755 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
756 call.GetDocumentation() |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
757 .SetTag("Instances") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
758 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
759 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
760 .SetHttpGetArgument("returnUnsupportedImage", RestApiCallDocumentation::Type_Boolean, "Returns an unsupported.png placeholder image if unable to provide the image instead of returning a 415 HTTP error (defaults to false)", false) |
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
761 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
762 .AddAnswerType(MimeType_Png, "PNG image") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
763 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
764 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
765 .SetDescription(description); |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
766 |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
767 return; |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
768 } |
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
769 |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
770 ServerContext& context = OrthancRestApi::GetContext(call); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
771 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
772 std::string frameId = call.GetUriComponent("frame", "0"); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
773 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
774 unsigned int frame; |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
775 try |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
776 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
777 frame = boost::lexical_cast<unsigned int>(frameId); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
778 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
779 catch (boost::bad_lexical_cast&) |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
780 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
781 return; |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
782 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
783 |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
784 std::unique_ptr<ImageAccessor> decoded; |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
785 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
786 try |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
787 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
788 std::string publicId = call.GetUriComponent("id", ""); |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
789 |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
790 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
791 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
792 if (decoded.get() == NULL) |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
793 { |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
794 throw OrthancException(ErrorCode_NotImplemented, |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
795 "Cannot decode DICOM instance with ID: " + publicId); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
796 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
797 |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
798 if (handler.RequiresDicomTags()) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
799 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
800 /** |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
801 * Retrieve a summary of the DICOM tags, which is |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
802 * necessary to deal with MONOCHROME1 photometric |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
803 * interpretation, and with windowing parameters. |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
804 **/ |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
805 ServerContext::DicomCacheLocker locker(context, publicId); |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
806 handler.Handle(call, decoded, &locker.GetDicom(), frame); |
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
807 } |
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
808 else |
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
809 { |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
810 handler.Handle(call, decoded, NULL, frame); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
811 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
812 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
813 catch (OrthancException& e) |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
814 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
815 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
816 e.GetErrorCode() == ErrorCode_UnknownResource) |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
817 { |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
818 // The frame number is out of the range for this DICOM |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
819 // instance, the resource is not existent |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
820 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
821 else |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
822 { |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
823 if (call.HasArgument("returnUnsupportedImage")) |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
824 { |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
825 std::string root = ""; |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
826 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
827 { |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
828 root += "../"; |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
829 } |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
830 |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
831 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
832 } |
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
833 else |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
834 { |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
835 call.GetOutput().SignalError(HttpStatus_415_UnsupportedMediaType); |
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
836 } |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
837 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
838 return; |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
839 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
840 |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
841 } |
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
842 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
843 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
844 static void DefaultHandler(RestApiGetCall& call, |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
845 std::unique_ptr<ImageAccessor>& decoded, |
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
846 ImageExtractionMode mode, |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
847 bool invert) |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
848 { |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
849 ImageToEncode image(decoded, mode, invert); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
850 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
851 HttpContentNegociation negociation; |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
852 EncodePng png(image); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
853 negociation.Register(MIME_PNG, png); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
854 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
855 EncodeJpeg jpeg(image, call); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
856 negociation.Register(MIME_JPEG, jpeg); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
857 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
858 EncodePam pam(image); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
859 negociation.Register(MIME_PAM, pam); |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
860 |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
861 if (negociation.Apply(call.GetHttpHeaders())) |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
862 { |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
863 image.Answer(call.GetOutput()); |
2cc34837d694
rendering of RGB24
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864 } |
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865 } |
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866 }; |
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867 |
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868 |
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869 class GetImageHandler : public IDecodedFrameHandler |
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870 { |
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871 private: |
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872 ImageExtractionMode mode_; |
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873 |
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|
874 public: |
4205 | 875 explicit GetImageHandler(ImageExtractionMode mode) : |
3683
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876 mode_(mode) |
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877 { |
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878 } |
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879 |
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skeleton for new route: /instances/{id}/rendered
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880 virtual void Handle(RestApiGetCall& call, |
3712
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replacing std::auto_ptr by std::unique_ptr
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881 std::unique_ptr<ImageAccessor>& decoded, |
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882 const ParsedDicomFile* dicom, |
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|
883 unsigned int frame) ORTHANC_OVERRIDE |
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884 { |
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changeset
|
885 bool invert = false; |
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886 |
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diff
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887 if (mode_ == ImageExtractionMode_Preview) |
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888 { |
4769
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diff
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|
889 if (dicom == NULL) |
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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diff
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|
890 { |
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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891 throw OrthancException(ErrorCode_InternalError); |
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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diff
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|
892 } |
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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diff
changeset
|
893 |
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diff
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|
894 DicomMap tags; |
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diff
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|
895 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
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diff
changeset
|
896 |
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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diff
changeset
|
897 DicomImageInformation info(tags); |
3683
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898 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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|
899 } |
3600
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|
900 |
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changeset
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901 DefaultHandler(call, decoded, mode_, invert); |
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902 } |
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|
903 |
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|
904 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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905 { |
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906 return mode_ == ImageExtractionMode_Preview; |
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907 } |
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diff
changeset
|
908 }; |
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|
909 |
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diff
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|
910 |
3683
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|
911 class RenderedFrameHandler : public IDecodedFrameHandler |
3600
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/instances/{id}/preview route now takes the windowing into account
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|
912 { |
3690
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diff
changeset
|
913 private: |
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diff
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|
914 static void GetUserArguments(double& windowWidth /* inout */, |
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Support detection of windowing and rescale in Philips multiframe images
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|
915 double& windowCenter /* inout */, |
3690
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diff
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|
916 unsigned int& argWidth, |
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|
917 unsigned int& argHeight, |
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diff
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|
918 bool& smooth, |
4205 | 919 const RestApiGetCall& call) |
3690
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|
920 { |
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diff
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|
921 static const char* ARG_WINDOW_CENTER = "window-center"; |
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implementation of "/instances/.../rendered" for grayscale images
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diff
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|
922 static const char* ARG_WINDOW_WIDTH = "window-width"; |
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diff
changeset
|
923 static const char* ARG_WIDTH = "width"; |
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parents:
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diff
changeset
|
924 static const char* ARG_HEIGHT = "height"; |
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
925 static const char* ARG_SMOOTH = "smooth"; |
3600
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/instances/{id}/preview route now takes the windowing into account
Alain Mazy <alain@mazy.be>
parents:
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diff
changeset
|
926 |
4777
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
927 if (call.HasArgument(ARG_WINDOW_WIDTH) && |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
928 !SerializationToolbox::ParseDouble(windowWidth, call.GetArgument(ARG_WINDOW_WIDTH, ""))) |
3685
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rendering of RGB24
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diff
changeset
|
929 { |
4777
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Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
930 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
931 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
3685
2cc34837d694
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diff
changeset
|
932 } |
2cc34837d694
rendering of RGB24
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parents:
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diff
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|
933 |
4777
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Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
934 if (call.HasArgument(ARG_WINDOW_CENTER) && |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
935 !SerializationToolbox::ParseDouble(windowCenter, call.GetArgument(ARG_WINDOW_CENTER, ""))) |
3683
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
936 { |
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
937 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
938 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
3685
2cc34837d694
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diff
changeset
|
939 } |
2cc34837d694
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parents:
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diff
changeset
|
940 |
3690
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
941 argWidth = 0; |
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
942 argHeight = 0; |
3685
2cc34837d694
rendering of RGB24
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diff
changeset
|
943 |
3690
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implementation of "/instances/.../rendered" for grayscale images
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parents:
3687
diff
changeset
|
944 if (call.HasArgument(ARG_WIDTH)) |
3685
2cc34837d694
rendering of RGB24
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diff
changeset
|
945 { |
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
946 try |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
947 { |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
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parents:
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diff
changeset
|
948 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
3685
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
949 if (tmp < 0) |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
950 { |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
951 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
952 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
3685
2cc34837d694
rendering of RGB24
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diff
changeset
|
953 } |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
954 else |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
955 { |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
956 argWidth = static_cast<unsigned int>(tmp); |
3685
2cc34837d694
rendering of RGB24
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diff
changeset
|
957 } |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
958 } |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
959 catch (boost::bad_lexical_cast&) |
2cc34837d694
rendering of RGB24
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3683
diff
changeset
|
960 { |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
961 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
962 "Bad value for argument: " + std::string(ARG_WIDTH)); |
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
963 } |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
964 } |
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
965 |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
966 if (call.HasArgument(ARG_HEIGHT)) |
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
967 { |
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
968 try |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
969 { |
3690
a9ce35d67c3c
implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3687
diff
changeset
|
970 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
971 if (tmp < 0) |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
972 { |
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
973 throw OrthancException(ErrorCode_ParameterOutOfRange, |
3690
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974 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
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975 } |
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976 else |
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977 { |
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978 argHeight = static_cast<unsigned int>(tmp); |
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979 } |
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980 } |
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981 catch (boost::bad_lexical_cast&) |
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982 { |
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983 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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984 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
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985 } |
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986 } |
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|
987 |
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988 smooth = false; |
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989 |
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990 if (call.HasArgument(ARG_SMOOTH)) |
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991 { |
4473
68f52897c119
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992 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
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993 } |
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994 } |
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995 |
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996 |
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|
997 public: |
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998 virtual void Handle(RestApiGetCall& call, |
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999 std::unique_ptr<ImageAccessor>& decoded, |
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1000 const ParsedDicomFile* dicom, |
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1001 unsigned int frame) ORTHANC_OVERRIDE |
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1002 { |
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|
1003 if (dicom == NULL) |
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1004 { |
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1005 throw OrthancException(ErrorCode_InternalError); |
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1006 } |
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|
1007 |
4777
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|
1008 PhotometricInterpretation photometric; |
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1009 const bool invert = (dicom->LookupPhotometricInterpretation(photometric) && |
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1010 photometric == PhotometricInterpretation_Monochrome1); |
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1011 |
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1012 double rescaleIntercept, rescaleSlope, windowCenter, windowWidth; |
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1013 dicom->GetRescale(rescaleIntercept, rescaleSlope, frame); |
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|
1014 dicom->GetDefaultWindowing(windowCenter, windowWidth, frame); |
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1015 |
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1016 unsigned int argWidth, argHeight; |
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1017 bool smooth; |
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1018 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
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1019 |
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1020 unsigned int targetWidth = decoded->GetWidth(); |
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1021 unsigned int targetHeight = decoded->GetHeight(); |
3686 | 1022 |
1023 if (decoded->GetWidth() != 0 && | |
1024 decoded->GetHeight() != 0) | |
1025 { | |
1026 float ratio = 1; | |
1027 | |
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1028 if (argWidth != 0 && |
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|
1029 argHeight != 0) |
3686 | 1030 { |
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1031 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
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1032 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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|
1033 ratio = std::min(ratioX, ratioY); |
3686 | 1034 } |
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1035 else if (argWidth != 0) |
3686 | 1036 { |
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1037 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
3686 | 1038 } |
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1039 else if (argHeight != 0) |
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1040 { |
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1041 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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1042 } |
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1043 |
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1044 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
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1045 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
3686 | 1046 } |
1047 | |
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1048 if (decoded->GetFormat() == PixelFormat_RGB24) |
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1049 { |
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1050 if (targetWidth == decoded->GetWidth() && |
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|
1051 targetHeight == decoded->GetHeight()) |
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1052 { |
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|
1053 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
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|
1054 } |
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|
1055 else |
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|
1056 { |
3712
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|
1057 std::unique_ptr<ImageAccessor> resized( |
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|
1058 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
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|
1059 |
3685
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|
1060 if (smooth && |
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1061 (targetWidth < decoded->GetWidth() || |
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|
1062 targetHeight < decoded->GetHeight())) |
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|
1063 { |
4065
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4055
diff
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|
1064 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
3685
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1065 } |
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|
1066 |
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|
1067 ImageProcessing::Resize(*resized, *decoded); |
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|
1068 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
3685
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|
1069 } |
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changeset
|
1070 } |
3686 | 1071 else |
1072 { | |
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|
1073 // Grayscale image: (1) convert to Float32, (2) apply |
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|
1074 // windowing to get a Grayscale8, (3) possibly resize |
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|
1075 |
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|
1076 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
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|
1077 ImageProcessing::Convert(converted, *decoded); |
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|
1078 |
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|
1079 // Avoid divisions by zero |
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|
1080 if (windowWidth <= 1.0f) |
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|
1081 { |
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|
1082 windowWidth = 1; |
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1083 } |
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changeset
|
1084 |
4834
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download of numpy arrays from the REST API
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|
1085 if (std::abs(rescaleSlope) <= 0.0001) |
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1086 { |
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|
1087 rescaleSlope = 0.0001; |
3690
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1088 } |
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|
1089 |
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1090 const double scaling = 255.0 * rescaleSlope / windowWidth; |
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1091 const double offset = (rescaleIntercept - windowCenter + windowWidth / 2.0) / rescaleSlope; |
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1092 |
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1093 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
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1094 ImageProcessing::ShiftScale(*rescaled, converted, static_cast<float>(offset), static_cast<float>(scaling), false); |
3690
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1095 |
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1096 if (targetWidth == decoded->GetWidth() && |
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1097 targetHeight == decoded->GetHeight()) |
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1098 { |
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1099 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
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1100 } |
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1101 else |
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1102 { |
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1103 std::unique_ptr<ImageAccessor> resized( |
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1104 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
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1105 |
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1106 if (smooth && |
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1107 (targetWidth < decoded->GetWidth() || |
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1108 targetHeight < decoded->GetHeight())) |
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1109 { |
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1110 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
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1111 } |
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1112 |
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1113 ImageProcessing::Resize(*resized, *rescaled); |
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1114 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
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1115 } |
3686 | 1116 } |
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1117 } |
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1118 |
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1119 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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1120 { |
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1121 return true; |
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1122 } |
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1123 }; |
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1124 } |
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1125 |
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1126 |
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1127 template <enum ImageExtractionMode mode> |
974 | 1128 static void GetImage(RestApiGetCall& call) |
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1129 { |
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1130 Semaphore::Locker locker(throttlingSemaphore_); |
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1131 |
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1132 GetImageHandler handler(mode); |
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1133 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
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1134 } |
1906
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1135 |
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1136 |
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1137 static void GetRenderedFrame(RestApiGetCall& call) |
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1138 { |
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1139 Semaphore::Locker locker(throttlingSemaphore_); |
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1140 |
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1141 RenderedFrameHandler handler; |
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1142 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
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1143 } |
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1144 |
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1145 |
4834
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1146 static void DocumentSharedNumpy(RestApiGetCall& call) |
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1147 { |
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1148 call.GetDocumentation() |
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1149 .SetUriArgument("id", "Orthanc identifier of the DICOM resource of interest") |
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1150 .SetHttpGetArgument("compress", RestApiCallDocumentation::Type_Boolean, "Compress the file as `.npz`", false) |
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1151 .SetHttpGetArgument("rescale", RestApiCallDocumentation::Type_Boolean, |
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1152 "On grayscale images, apply the rescaling and return floating-point values", false) |
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1153 .AddAnswerType(MimeType_PlainText, "Numpy file: https://numpy.org/devdocs/reference/generated/numpy.lib.format.html"); |
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1154 } |
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1155 |
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1156 |
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1157 namespace |
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1158 { |
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1159 class NumpyVisitor : public boost::noncopyable |
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1160 { |
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1161 private: |
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1162 bool rescale_; |
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1163 unsigned int depth_; |
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1164 unsigned int currentDepth_; |
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1165 unsigned int height_; |
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1166 unsigned int width_; |
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1167 PixelFormat format_; |
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1168 ChunkedBuffer buffer_; |
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1169 |
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1170 public: |
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1171 NumpyVisitor(unsigned int depth /* can be zero if 2D frame */, |
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1172 bool rescale) : |
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1173 rescale_(rescale), |
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1174 depth_(depth), |
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1175 currentDepth_(0) |
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1176 { |
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1177 } |
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1178 |
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1179 void WriteFrame(ParsedDicomFile& dicom, |
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1180 unsigned int frame) |
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1181 { |
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1182 std::unique_ptr<ImageAccessor> decoded(dicom.DecodeFrame(frame)); |
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1183 |
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1184 if (decoded.get() == NULL) |
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1185 { |
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1186 throw OrthancException(ErrorCode_NotImplemented, "Cannot decode DICOM instance"); |
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1187 } |
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1188 |
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1189 if (currentDepth_ == 0) |
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1190 { |
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1191 width_ = decoded->GetWidth(); |
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1192 height_ = decoded->GetHeight(); |
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1193 format_ = decoded->GetFormat(); |
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1194 } |
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1195 else if (width_ != decoded->GetWidth() || |
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1196 height_ != decoded->GetHeight()) |
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1197 { |
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1198 throw OrthancException(ErrorCode_IncompatibleImageSize, "The size of the frames varies across the instance(s)"); |
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1199 } |
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1200 else if (format_ != decoded->GetFormat()) |
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1201 { |
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1202 throw OrthancException(ErrorCode_IncompatibleImageFormat, "The pixel format of the frames varies across the instance(s)"); |
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1203 } |
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1204 |
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1205 if (rescale_ && |
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1206 decoded->GetFormat() != PixelFormat_RGB24) |
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1207 { |
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1208 if (currentDepth_ == 0) |
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1209 { |
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1210 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, PixelFormat_Float32); |
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1211 } |
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1212 |
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1213 double rescaleIntercept, rescaleSlope; |
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1214 dicom.GetRescale(rescaleIntercept, rescaleSlope, frame); |
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1215 |
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1216 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
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1217 ImageProcessing::Convert(converted, *decoded); |
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1218 ImageProcessing::ShiftScale2(converted, static_cast<float>(rescaleIntercept), static_cast<float>(rescaleSlope), false); |
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1219 |
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1220 NumpyWriter::WritePixels(buffer_, converted); |
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1221 } |
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1222 else |
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1223 { |
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1224 if (currentDepth_ == 0) |
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1225 { |
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1226 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, format_); |
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1227 } |
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1228 |
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1229 NumpyWriter::WritePixels(buffer_, *decoded); |
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1230 } |
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1231 |
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1232 currentDepth_ ++; |
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1233 } |
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|
1234 |
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1235 void Answer(RestApiOutput& output, |
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1236 bool compress) |
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1237 { |
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1238 if ((depth_ == 0 && currentDepth_ != 1) || |
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Sebastien Jodogne <s.jodogne@gmail.com>
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1239 (depth_ != 0 && currentDepth_ != depth_)) |
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1240 { |
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1241 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
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1242 } |
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1243 else |
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1244 { |
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1245 std::string answer; |
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1246 NumpyWriter::Finalize(answer, buffer_, compress); |
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1247 output.AnswerBuffer(answer, MimeType_Binary); |
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1248 } |
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1249 } |
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1250 }; |
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1251 } |
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1252 |
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|
1253 |
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1254 static void GetNumpyFrame(RestApiGetCall& call) |
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1255 { |
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1256 if (call.IsDocumentation()) |
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1257 { |
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1258 DocumentSharedNumpy(call); |
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1259 call.GetDocumentation() |
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1260 .SetTag("Instances") |
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1261 .SetSummary("Decode frame for numpy") |
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1262 .SetDescription("Decode one frame of interest from the given DICOM instance, for use with numpy in Python") |
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1263 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
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1264 } |
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1265 else |
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|
1266 { |
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|
1267 const std::string instanceId = call.GetUriComponent("id", ""); |
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1268 const bool compress = call.GetBooleanArgument("compress", false); |
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1269 const bool rescale = call.GetBooleanArgument("rescale", true); |
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|
1270 |
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|
1271 uint32_t frame; |
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1272 if (!SerializationToolbox::ParseUnsignedInteger32(frame, call.GetUriComponent("frame", "0"))) |
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1273 { |
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|
1274 throw OrthancException(ErrorCode_ParameterOutOfRange, "Expected an unsigned integer for the \"frame\" argument"); |
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1275 } |
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|
1276 |
bec432ee1094
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|
1277 NumpyVisitor visitor(0 /* no depth, 2D frame */, rescale); |
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|
1278 |
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1279 { |
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|
1280 Semaphore::Locker throttling(throttlingSemaphore_); |
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|
1281 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
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1282 |
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1283 visitor.WriteFrame(locker.GetDicom(), frame); |
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1284 } |
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1285 |
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|
1286 visitor.Answer(call.GetOutput(), compress); |
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1287 } |
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1288 } |
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changeset
|
1289 |
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1290 |
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1291 static void GetNumpyInstance(RestApiGetCall& call) |
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1292 { |
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1293 if (call.IsDocumentation()) |
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1294 { |
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1295 DocumentSharedNumpy(call); |
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1296 call.GetDocumentation() |
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1297 .SetTag("Instances") |
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1298 .SetSummary("Decode instance for numpy") |
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1299 .SetDescription("Decode the given DICOM instance, for use with numpy in Python"); |
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1300 } |
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1301 else |
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1302 { |
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|
1303 const std::string instanceId = call.GetUriComponent("id", ""); |
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1304 const bool compress = call.GetBooleanArgument("compress", false); |
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1305 const bool rescale = call.GetBooleanArgument("rescale", true); |
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|
1306 |
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|
1307 { |
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|
1308 Semaphore::Locker throttling(throttlingSemaphore_); |
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|
1309 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
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|
1310 |
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1311 const unsigned int depth = locker.GetDicom().GetFramesCount(); |
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1312 if (depth == 0) |
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1313 { |
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1314 throw OrthancException(ErrorCode_BadFileFormat, "Empty DICOM instance"); |
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1315 } |
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|
1316 |
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|
1317 NumpyVisitor visitor(depth, rescale); |
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|
1318 |
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1319 for (unsigned int frame = 0; frame < depth; frame++) |
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1320 { |
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1321 visitor.WriteFrame(locker.GetDicom(), frame); |
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1322 } |
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|
1323 |
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1324 visitor.Answer(call.GetOutput(), compress); |
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1325 } |
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1326 } |
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1327 } |
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1328 |
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1329 |
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1330 static void GetNumpySeries(RestApiGetCall& call) |
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1331 { |
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1332 if (call.IsDocumentation()) |
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1333 { |
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1334 DocumentSharedNumpy(call); |
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1335 call.GetDocumentation() |
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1336 .SetTag("Series") |
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1337 .SetSummary("Decode series for numpy") |
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1338 .SetDescription("Decode the given DICOM series, for use with numpy in Python"); |
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1339 } |
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1340 else |
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1341 { |
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1342 const std::string seriesId = call.GetUriComponent("id", ""); |
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1343 const bool compress = call.GetBooleanArgument("compress", false); |
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1344 const bool rescale = call.GetBooleanArgument("rescale", true); |
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1345 |
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1346 Semaphore::Locker throttling(throttlingSemaphore_); |
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1347 |
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1348 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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download of numpy arrays from the REST API
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1349 SliceOrdering ordering(index, seriesId); |
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1350 |
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1351 unsigned int depth = 0; |
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1352 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
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1353 { |
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1354 depth += ordering.GetFramesCount(i); |
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1355 } |
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1356 |
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1357 ServerContext& context = OrthancRestApi::GetContext(call); |
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1358 |
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1359 NumpyVisitor visitor(depth, rescale); |
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1360 |
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|
1361 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
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1362 { |
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1363 const std::string& instanceId = ordering.GetInstanceId(i); |
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download of numpy arrays from the REST API
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1364 unsigned int framesCount = ordering.GetFramesCount(i); |
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download of numpy arrays from the REST API
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1365 |
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download of numpy arrays from the REST API
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1366 { |
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1367 ServerContext::DicomCacheLocker locker(context, instanceId); |
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|
1368 |
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changeset
|
1369 for (unsigned int frame = 0; frame < framesCount; frame++) |
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1370 { |
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|
1371 visitor.WriteFrame(locker.GetDicom(), frame); |
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1372 } |
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|
1373 } |
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|
1374 } |
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1375 |
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|
1376 visitor.Answer(call.GetOutput(), compress); |
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1377 } |
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1378 } |
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|
1379 |
bec432ee1094
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1380 |
974 | 1381 static void GetMatlabImage(RestApiGetCall& call) |
874
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1382 { |
4414 | 1383 if (call.IsDocumentation()) |
1384 { | |
1385 std::string description; | |
1386 | |
1387 if (call.HasUriComponent("frame")) | |
1388 { | |
1389 description = "Decode one frame of interest from the given DICOM instance"; | |
1390 call.GetDocumentation() | |
1391 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
1392 } | |
1393 else | |
1394 { | |
1395 description = "Decode the first frame of the given DICOM instance."; | |
1396 } | |
1397 | |
1398 call.GetDocumentation() | |
1399 .SetTag("Instances") | |
1400 .SetSummary("Decode frame for Matlab") | |
1401 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
1402 "https://book.orthanc-server.com/faq/matlab.html") | |
1403 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
1404 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
1405 return; | |
1406 } | |
1407 | |
3926
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1408 Semaphore::Locker locker(throttlingSemaphore_); |
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1409 |
874
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1410 ServerContext& context = OrthancRestApi::GetContext(call); |
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1411 |
87791ebc1f50
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1412 std::string frameId = call.GetUriComponent("frame", "0"); |
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download matlab images
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1413 |
87791ebc1f50
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1414 unsigned int frame; |
87791ebc1f50
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1415 try |
87791ebc1f50
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1416 { |
87791ebc1f50
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1417 frame = boost::lexical_cast<unsigned int>(frameId); |
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diff
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1418 } |
2836
7133ad478eea
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diff
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1419 catch (boost::bad_lexical_cast&) |
874
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1420 { |
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1421 return; |
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1422 } |
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1423 |
87791ebc1f50
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1424 std::string publicId = call.GetUriComponent("id", ""); |
3928
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ServerContext::DecodeDicomFrame()
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1425 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
874
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1426 |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
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1427 if (decoded.get() == NULL) |
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1428 { |
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1429 throw OrthancException(ErrorCode_NotImplemented, |
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1430 "Cannot decode DICOM instance with ID: " + publicId); |
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ServerContext::DecodeDicomFrame()
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1431 } |
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1432 else |
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ServerContext::DecodeDicomFrame()
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1433 { |
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1434 std::string result; |
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ServerContext::DecodeDicomFrame()
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1435 decoded->ToMatlabString(result); |
4cdc875510d1
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1436 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
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1437 } |
874
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1438 } |
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1439 |
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1440 |
2408
26a0cc24d48d
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diff
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1441 template <bool GzipCompression> |
1924
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diff
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1442 static void GetRawFrame(RestApiGetCall& call) |
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diff
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|
1443 { |
4408 | 1444 if (call.IsDocumentation()) |
1445 { | |
1446 call.GetDocumentation() | |
1447 .SetTag("Instances") | |
1448 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
1449 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
1450 "bypassing image decoding. This is notably useful to access the source files " | |
1451 "in compressed transfer syntaxes." + | |
1452 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
4424
83371ccdfe80
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1453 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
4408 | 1454 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
1455 | |
1456 if (GzipCompression) | |
1457 { | |
1458 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
1459 } | |
1460 else | |
1461 { | |
1462 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
1463 } | |
1464 return; | |
1465 } | |
1466 | |
1924
6c73df12ca51
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diff
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1467 std::string frameId = call.GetUriComponent("frame", "0"); |
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diff
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1468 |
6c73df12ca51
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diff
changeset
|
1469 unsigned int frame; |
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1470 try |
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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1471 { |
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diff
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|
1472 frame = boost::lexical_cast<unsigned int>(frameId); |
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1473 } |
2836
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|
1474 catch (boost::bad_lexical_cast&) |
1924
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1475 { |
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1476 return; |
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1477 } |
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1478 |
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1479 std::string publicId = call.GetUriComponent("id", ""); |
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1480 std::string raw; |
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1481 MimeType mime; |
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1482 |
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1483 { |
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1484 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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1485 locker.GetDicom().GetRawFrame(raw, mime, frame); |
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1486 } |
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1487 |
2408
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1488 if (GzipCompression) |
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1489 { |
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1490 GzipCompressor gzip; |
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1491 std::string compressed; |
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|
1492 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
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1493 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
2408
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1494 } |
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1495 else |
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1496 { |
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|
1497 call.GetOutput().AnswerBuffer(raw, mime); |
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1498 } |
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1499 } |
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1500 |
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|
1501 |
974 | 1502 static void GetResourceStatistics(RestApiGetCall& call) |
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1503 { |
4418 | 1504 if (call.IsDocumentation()) |
1505 { | |
1506 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1507 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1508 call.GetDocumentation() | |
1509 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1510 .SetSummary("Get " + r + " statistics") | |
1511 .SetDescription("Get statistics about the given " + r) | |
1512 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1513 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
1514 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
1515 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
1516 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
1517 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
1518 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
1519 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
1520 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
1521 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
1522 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
1523 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
1524 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
1525 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
1526 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
1527 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
1528 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
1529 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
1530 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
1531 | |
1532 switch (t) | |
1533 { | |
1534 // Do NOT add "break" below this point! | |
1535 case ResourceType_Patient: | |
1536 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
1537 "Number of child studies within this " + r); | |
1538 | |
1539 case ResourceType_Study: | |
1540 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
1541 "Number of child series within this " + r); | |
1542 | |
1543 case ResourceType_Series: | |
1544 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
1545 "Number of child instances within this " + r); | |
1546 | |
1547 case ResourceType_Instance: | |
1548 default: | |
1549 break; | |
1550 } | |
1551 | |
1552 return; | |
1553 } | |
1554 | |
3174
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1555 static const uint64_t MEGA_BYTES = 1024 * 1024; |
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1556 |
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1557 std::string publicId = call.GetUriComponent("id", ""); |
3174
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1558 |
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1559 ResourceType type; |
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1560 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
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1561 unsigned int countStudies, countSeries, countInstances; |
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1562 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
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1563 type, diskSize, uncompressedSize, countStudies, countSeries, |
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1564 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
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1565 |
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1566 Json::Value result = Json::objectValue; |
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1567 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
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1568 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
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1569 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
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1570 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
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1571 |
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1572 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
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1573 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1574 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
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1575 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
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1576 |
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1577 switch (type) |
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1578 { |
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1579 // Do NOT add "break" below this point! |
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1580 case ResourceType_Patient: |
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1581 result["CountStudies"] = countStudies; |
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1582 |
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1583 case ResourceType_Study: |
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1584 result["CountSeries"] = countSeries; |
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1585 |
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1586 case ResourceType_Series: |
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1587 result["CountInstances"] = countInstances; |
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1588 |
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1589 case ResourceType_Instance: |
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1590 default: |
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1591 break; |
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1592 } |
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1593 |
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1594 call.GetOutput().AnswerJson(result); |
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1595 } |
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1596 |
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1597 |
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1598 |
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1599 // Handling of metadata ----------------------------------------------------- |
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1600 |
4205 | 1601 static void CheckValidResourceType(const RestApiCall& call) |
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1602 { |
4460
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1603 assert(!call.GetFullUri().empty()); |
4409 | 1604 const std::string resourceType = call.GetFullUri() [0]; |
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1605 StringToResourceType(resourceType.c_str()); |
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1606 } |
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1607 |
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1608 |
974 | 1609 static void ListMetadata(RestApiGetCall& call) |
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1610 { |
4414 | 1611 if (call.IsDocumentation()) |
1612 { | |
1613 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1614 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1615 call.GetDocumentation() | |
1616 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1617 .SetSummary("List metadata") | |
1618 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
1619 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1620 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
1621 "If present, also retrieve the value of the individual metadata", false) | |
1622 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " | |
1623 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
1624 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
1625 return; | |
1626 } | |
1627 | |
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1628 assert(!call.GetFullUri().empty()); |
4554 | 1629 const std::string publicId = call.GetUriComponent("id", ""); |
1630 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
4551
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1631 |
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1632 typedef std::map<MetadataType, std::string> Metadata; |
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|
1633 |
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testing replay of transactions
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|
1634 Metadata metadata; |
4554 | 1635 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
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1636 |
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|
1637 Json::Value result; |
751
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1638 |
2726
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diff
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|
1639 if (call.HasArgument("expand")) |
751
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1640 { |
2726
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diff
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|
1641 result = Json::objectValue; |
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|
1642 |
4551
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1643 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
2726
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|
1644 { |
3187
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diff
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1645 std::string key = EnumerationToString(it->first); |
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refactoring retrieval of metadata from database
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diff
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|
1646 result[key] = it->second; |
2726
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1647 } |
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1648 } |
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1649 else |
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1650 { |
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|
1651 result = Json::arrayValue; |
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1652 |
4551
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1653 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
2726
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1654 { |
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1655 result.append(EnumerationToString(it->first)); |
2726
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1656 } |
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1657 } |
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1658 |
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1659 call.GetOutput().AnswerJson(result); |
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1660 } |
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|
1661 |
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|
1662 |
4657 | 1663 static void SetStringContentETag(const RestApiOutput& output, |
1664 int64_t revision, | |
1665 const std::string& value) | |
4640
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1666 { |
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1667 std::string md5; |
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1668 Toolbox::ComputeMD5(md5, value); |
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1669 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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1670 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1671 } |
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|
1672 |
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|
1673 |
4657 | 1674 static void SetBufferContentETag(const RestApiOutput& output, |
4640
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1675 int64_t revision, |
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|
1676 const void* data, |
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|
1677 size_t size) |
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1678 { |
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|
1679 std::string md5; |
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|
1680 Toolbox::ComputeMD5(md5, data, size); |
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|
1681 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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|
1682 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1683 } |
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1684 |
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1685 |
4657 | 1686 static void SetAttachmentETag(const RestApiOutput& output, |
4640
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1687 int64_t revision, |
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|
1688 const FileInfo& info) |
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1689 { |
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1690 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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1691 info.GetUncompressedMD5() + "\""); |
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|
1692 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1693 } |
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1694 |
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1695 |
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|
1696 static std::string GetMD5(const std::string& value) |
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1697 { |
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|
1698 std::string md5; |
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|
1699 Toolbox::ComputeMD5(md5, value); |
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1700 return md5; |
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1701 } |
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1702 |
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1703 |
4623
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1704 static bool GetRevisionHeader(int64_t& revision /* out */, |
4640
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1705 std::string& md5 /* out */, |
4623
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1706 const RestApiCall& call, |
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1707 const std::string& header) |
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1708 { |
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|
1709 std::string lower; |
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|
1710 Toolbox::ToLowerCase(lower, header); |
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1711 |
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1712 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1713 if (found == call.GetHttpHeaders().end()) |
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1714 { |
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1715 return false; |
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1716 } |
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1717 else |
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1718 { |
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1719 std::string value = Toolbox::StripSpaces(found->second); |
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1720 Toolbox::RemoveSurroundingQuotes(value); |
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1721 |
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1722 try |
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1723 { |
4640
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1724 size_t comma = value.find('-'); |
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1725 if (comma != std::string::npos) |
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1726 { |
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1727 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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1728 md5 = value.substr(comma + 1); |
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1729 return true; |
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1730 } |
4623
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1731 } |
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1732 catch (boost::bad_lexical_cast&) |
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1733 { |
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1734 } |
4640
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1735 |
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1736 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1737 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
4623
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1738 } |
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1739 } |
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1740 |
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1741 |
974 | 1742 static void GetMetadata(RestApiGetCall& call) |
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1743 { |
4414 | 1744 if (call.IsDocumentation()) |
1745 { | |
1746 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1747 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1748 call.GetDocumentation() | |
1749 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1750 .SetSummary("Get metadata") | |
1751 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
1752 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1753 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1754 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1755 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1756 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
4414 | 1757 return; |
1758 } | |
1759 | |
4460
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1760 assert(!call.GetFullUri().empty()); |
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1761 const std::string publicId = call.GetUriComponent("id", ""); |
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1762 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1763 |
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1764 std::string name = call.GetUriComponent("name", ""); |
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1765 MetadataType metadata = StringToMetadata(name); |
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1766 |
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1767 std::string value; |
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1768 int64_t revision; |
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1769 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1770 { |
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1771 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
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1772 |
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1773 int64_t userRevision; |
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1774 std::string userMD5; |
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1775 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1776 userRevision == revision && |
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1777 userMD5 == GetMD5(value)) |
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1778 { |
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1779 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1780 } |
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1781 else |
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1782 { |
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1783 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1784 } |
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1785 } |
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1786 } |
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1787 |
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1788 |
974 | 1789 static void DeleteMetadata(RestApiDeleteCall& call) |
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1790 { |
4414 | 1791 if (call.IsDocumentation()) |
1792 { | |
1793 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1794 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1795 call.GetDocumentation() | |
1796 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1797 .SetSummary("Delete metadata") | |
1798 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
1799 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
1800 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
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1801 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
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1802 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
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1803 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
4414 | 1804 return; |
1805 } | |
1806 | |
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1807 CheckValidResourceType(call); |
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1808 const std::string publicId = call.GetUriComponent("id", ""); |
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1809 |
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1810 std::string name = call.GetUriComponent("name", ""); |
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1811 MetadataType metadata = StringToMetadata(name); |
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1812 |
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1813 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
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1814 { |
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1815 bool found; |
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1816 int64_t revision; |
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1817 std::string md5; |
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1818 if (GetRevisionHeader(revision, md5, call, "if-match")) |
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1819 { |
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1820 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
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1821 } |
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1822 else |
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1823 { |
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1824 OrthancConfiguration::ReaderLock lock; |
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1825 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1826 { |
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1827 throw OrthancException(ErrorCode_Revision, |
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1828 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
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1829 } |
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1830 else |
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1831 { |
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1832 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
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1833 } |
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1834 } |
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1835 |
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1836 if (found) |
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1837 { |
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1838 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1839 } |
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1840 else |
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1841 { |
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1842 throw OrthancException(ErrorCode_UnknownResource); |
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1843 } |
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1844 } |
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1845 else |
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1846 { |
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1847 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1848 } |
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1849 } |
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1850 |
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1851 |
974 | 1852 static void SetMetadata(RestApiPutCall& call) |
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1853 { |
4414 | 1854 if (call.IsDocumentation()) |
1855 { | |
1856 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1857 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1858 call.GetDocumentation() | |
1859 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1860 .SetSummary("Set metadata") | |
1861 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
1862 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
1863 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1864 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
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1865 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
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1866 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
4414 | 1867 return; |
1868 } | |
1869 | |
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1870 CheckValidResourceType(call); |
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1871 |
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1872 std::string publicId = call.GetUriComponent("id", ""); |
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1873 std::string name = call.GetUriComponent("name", ""); |
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1874 MetadataType metadata = StringToMetadata(name); |
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1875 |
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1876 std::string value; |
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1877 call.BodyToString(value); |
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1878 |
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1879 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
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1880 { |
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1881 int64_t oldRevision; |
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1882 std::string oldMD5; |
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1883 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
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1884 |
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1885 if (!hasOldRevision) |
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1886 { |
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1887 OrthancConfiguration::ReaderLock lock; |
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1888 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1889 { |
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1890 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
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1891 // the actual value of "oldRevision" if the metadata is |
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1892 // inexistent as expected |
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1893 hasOldRevision = true; |
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1894 oldRevision = -1; // dummy value |
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1895 oldMD5.clear(); // dummy value |
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1896 } |
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1897 } |
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1898 |
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1899 int64_t newRevision; |
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1900 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
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1901 hasOldRevision, oldRevision, oldMD5); |
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1902 |
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1903 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
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1904 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1905 } |
2128
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1906 else |
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1907 { |
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1908 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1909 } |
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1910 } |
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1911 |
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1912 |
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1913 |
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1914 |
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1915 // Handling of attached files ----------------------------------------------- |
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1916 |
974 | 1917 static void ListAttachments(RestApiGetCall& call) |
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1918 { |
4409 | 1919 if (call.IsDocumentation()) |
1920 { | |
1921 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
1922 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
1923 call.GetDocumentation() | |
1924 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
1925 .SetSummary("List attachments") | |
1926 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
1927 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
1928 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") | |
1929 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
1930 return; | |
1931 } | |
1932 | |
1933 const std::string resourceType = call.GetFullUri() [0]; | |
1934 const std::string publicId = call.GetUriComponent("id", ""); | |
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1935 std::set<FileContentType> attachments; |
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1936 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
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1937 |
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1938 Json::Value result = Json::arrayValue; |
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1939 |
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1940 for (std::set<FileContentType>::const_iterator |
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1941 it = attachments.begin(); it != attachments.end(); ++it) |
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1942 { |
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1943 result.append(EnumerationToString(*it)); |
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1944 } |
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1945 |
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1946 call.GetOutput().AnswerJson(result); |
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1947 } |
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1948 |
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1949 |
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1950 static void AddAttachmentDocumentation(RestApiGetCall& call, |
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1951 const std::string& resourceType) |
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1952 { |
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1953 call.GetDocumentation() |
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1954 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
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1955 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
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1956 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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1957 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
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1958 } |
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1959 |
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1960 |
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1961 static bool GetAttachmentInfo(FileInfo& info, |
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1962 RestApiGetCall& call) |
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1963 { |
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1964 CheckValidResourceType(call); |
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1965 |
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1966 const std::string publicId = call.GetUriComponent("id", ""); |
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1967 const std::string name = call.GetUriComponent("name", ""); |
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1968 FileContentType contentType = StringToContentType(name); |
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1969 |
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1970 int64_t revision; |
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1971 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
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1972 { |
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1973 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
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1974 |
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1975 int64_t userRevision; |
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1976 std::string userMD5; |
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1977 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1978 revision == userRevision && |
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1979 info.GetUncompressedMD5() == userMD5) |
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1980 { |
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1981 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1982 return false; |
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1983 } |
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1984 else |
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1985 { |
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1986 return true; |
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1987 } |
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1988 } |
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1989 else |
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1990 { |
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1991 throw OrthancException(ErrorCode_UnknownResource); |
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1992 } |
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1993 } |
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|
1994 |
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1995 |
974 | 1996 static void GetAttachmentOperations(RestApiGetCall& call) |
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1997 { |
4409 | 1998 if (call.IsDocumentation()) |
1999 { | |
2000 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2001 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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2002 AddAttachmentDocumentation(call, r); |
4409 | 2003 call.GetDocumentation() |
2004 .SetTag("Other") | |
4414 | 2005 .SetSummary("List operations on attachments") |
2006 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
4409 | 2007 .AddAnswerType(MimeType_Json, "List of the available operations") |
2008 .SetHttpGetSample("https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2/attachments/dicom", true); | |
2009 return; | |
2010 } | |
2011 | |
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2012 FileInfo info; |
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2013 if (GetAttachmentInfo(info, call)) |
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2014 { |
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2015 Json::Value operations = Json::arrayValue; |
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|
2016 |
1700
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2017 operations.append("compress"); |
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2018 operations.append("compressed-data"); |
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2019 |
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2020 if (info.GetCompressedMD5() != "") |
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2021 { |
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2022 operations.append("compressed-md5"); |
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2023 } |
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2024 |
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2025 operations.append("compressed-size"); |
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2026 operations.append("data"); |
1700
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diff
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|
2027 operations.append("is-compressed"); |
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2028 |
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2029 if (info.GetUncompressedMD5() != "") |
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|
2030 { |
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2031 operations.append("md5"); |
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2032 } |
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|
2033 |
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|
2034 operations.append("size"); |
1700
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2035 operations.append("uncompress"); |
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2036 |
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2037 if (info.GetCompressedMD5() != "" && |
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|
2038 info.GetUncompressedMD5() != "") |
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2039 { |
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|
2040 operations.append("verify-md5"); |
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|
2041 } |
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|
2042 |
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2043 call.GetOutput().AnswerJson(operations); |
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2044 } |
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|
2045 } |
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|
2046 |
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|
2047 |
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|
2048 template <int uncompress> |
974 | 2049 static void GetAttachmentData(RestApiGetCall& call) |
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|
2050 { |
4409 | 2051 if (call.IsDocumentation()) |
2052 { | |
2053 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2054 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2055 call.GetDocumentation() | |
2056 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2057 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
2058 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
4418 | 2059 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
4409 | 2060 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4414 | 2061 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
4627
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|
2062 .AddAnswerType(MimeType_Binary, "The attachment") |
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2063 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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2064 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
4409 | 2065 return; |
2066 } | |
2067 | |
751
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2068 ServerContext& context = OrthancRestApi::GetContext(call); |
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2069 |
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2070 CheckValidResourceType(call); |
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|
2071 |
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2072 std::string publicId = call.GetUriComponent("id", ""); |
1146
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|
2073 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
751
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2074 |
4640
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2075 FileInfo info; |
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|
2076 if (GetAttachmentInfo(info, call)) |
1146
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2077 { |
4640
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2078 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
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2079 |
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|
2080 if (uncompress) |
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2081 { |
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2082 context.AnswerAttachment(call.GetOutput(), publicId, type); |
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2083 } |
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2084 else |
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|
2085 { |
4640
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2086 // Return the raw data (possibly compressed), as stored on the filesystem |
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|
2087 std::string content; |
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2088 int64_t revision; |
66109d24d26e
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2089 context.ReadAttachment(content, revision, publicId, type, false); |
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2090 |
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|
2091 int64_t userRevision; |
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|
2092 std::string userMD5; |
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|
2093 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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|
2094 revision == userRevision && |
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|
2095 info.GetUncompressedMD5() == userMD5) |
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|
2096 { |
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|
2097 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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2098 } |
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2099 else |
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2100 { |
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|
2101 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
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|
2102 } |
4627
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|
2103 } |
1146
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|
2104 } |
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|
2105 } |
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|
2106 |
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2107 |
974 | 2108 static void GetAttachmentSize(RestApiGetCall& call) |
751
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|
2109 { |
4409 | 2110 if (call.IsDocumentation()) |
2111 { | |
2112 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2113 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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2114 AddAttachmentDocumentation(call, r); |
4409 | 2115 call.GetDocumentation() |
2116 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2117 .SetSummary("Get size of attachment") | |
2118 .SetDescription("Get the size of one attachment associated with the given " + r) | |
2119 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
2120 return; | |
2121 } | |
2122 | |
751
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2123 FileInfo info; |
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2124 if (GetAttachmentInfo(info, call)) |
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2125 { |
2908
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2126 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
751
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2127 } |
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|
2128 } |
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|
2129 |
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2130 |
974 | 2131 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
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2132 { |
4409 | 2133 if (call.IsDocumentation()) |
2134 { | |
2135 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2136 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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2137 AddAttachmentDocumentation(call, r); |
4409 | 2138 call.GetDocumentation() |
2139 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
4410 | 2140 .SetSummary("Get size of attachment on disk") |
4409 | 2141 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
4413 | 2142 "This is different from `.../size` iff `EnableStorage` is `true`.") |
4410 | 2143 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
4409 | 2144 return; |
2145 } | |
2146 | |
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2147 FileInfo info; |
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2148 if (GetAttachmentInfo(info, call)) |
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2149 { |
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2150 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
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2151 } |
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|
2152 } |
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|
2153 |
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2154 |
974 | 2155 static void GetAttachmentMD5(RestApiGetCall& call) |
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2156 { |
4410 | 2157 if (call.IsDocumentation()) |
2158 { | |
2159 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2160 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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2161 AddAttachmentDocumentation(call, r); |
4410 | 2162 call.GetDocumentation() |
2163 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2164 .SetSummary("Get MD5 of attachment") | |
2165 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
2166 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
2167 return; | |
2168 } | |
2169 | |
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2170 FileInfo info; |
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2171 if (GetAttachmentInfo(info, call) && |
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2172 info.GetUncompressedMD5() != "") |
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2173 { |
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2174 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
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2175 } |
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2176 } |
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2177 |
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2178 |
974 | 2179 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
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2180 { |
4410 | 2181 if (call.IsDocumentation()) |
2182 { | |
2183 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2184 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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2185 AddAttachmentDocumentation(call, r); |
4410 | 2186 call.GetDocumentation() |
2187 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2188 .SetSummary("Get MD5 of attachment on disk") | |
2189 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
4413 | 2190 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
4410 | 2191 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
2192 return; | |
2193 } | |
2194 | |
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2195 FileInfo info; |
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2196 if (GetAttachmentInfo(info, call) && |
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2197 info.GetCompressedMD5() != "") |
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2198 { |
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2199 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
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2200 } |
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|
2201 } |
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|
2202 |
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2203 |
974 | 2204 static void VerifyAttachment(RestApiPostCall& call) |
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2205 { |
4410 | 2206 if (call.IsDocumentation()) |
2207 { | |
2208 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2209 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2210 call.GetDocumentation() | |
2211 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2212 .SetSummary("Verify attachment") | |
2213 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
2214 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
4414 | 2215 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
4410 | 2216 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
2217 return; | |
2218 } | |
2219 | |
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2220 ServerContext& context = OrthancRestApi::GetContext(call); |
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2221 CheckValidResourceType(call); |
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2222 |
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2223 std::string publicId = call.GetUriComponent("id", ""); |
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2224 std::string name = call.GetUriComponent("name", ""); |
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2225 FileContentType contentType = StringToContentType(name); |
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2226 |
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2227 FileInfo info; |
4627
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2228 int64_t revision; // Ignored |
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2229 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
751
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2230 info.GetCompressedMD5() == "" || |
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2231 info.GetUncompressedMD5() == "") |
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|
2232 { |
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2233 // Inexistent resource, or no MD5 available |
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2234 return; |
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diff
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|
2235 } |
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|
2236 |
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2237 bool ok = false; |
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|
2238 |
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2239 // First check whether the compressed data is correctly stored in the disk |
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2240 std::string data; |
4627
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2241 context.ReadAttachment(data, revision, publicId, StringToContentType(name), false); |
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2242 |
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2243 std::string actualMD5; |
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|
2244 Toolbox::ComputeMD5(actualMD5, data); |
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|
2245 |
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|
2246 if (actualMD5 == info.GetCompressedMD5()) |
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2247 { |
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2248 // The compressed data is OK. If a compression algorithm was |
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2249 // applied to it, now check the MD5 of the uncompressed data. |
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2250 if (info.GetCompressionType() == CompressionType_None) |
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|
2251 { |
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2252 ok = true; |
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2253 } |
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|
2254 else |
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2255 { |
4627
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2256 context.ReadAttachment(data, revision, publicId, StringToContentType(name), true); |
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2257 Toolbox::ComputeMD5(actualMD5, data); |
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2258 ok = (actualMD5 == info.GetUncompressedMD5()); |
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2259 } |
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2260 } |
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2261 |
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|
2262 if (ok) |
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|
2263 { |
4294
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Alain Mazy <alain@mazy.be>
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4272
diff
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|
2264 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
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2265 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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2266 } |
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|
2267 else |
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|
2268 { |
4294
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Alain Mazy <alain@mazy.be>
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4272
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|
2269 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
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2270 } |
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2271 } |
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|
2272 |
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2273 |
974 | 2274 static void UploadAttachment(RestApiPutCall& call) |
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2275 { |
4414 | 2276 if (call.IsDocumentation()) |
2277 { | |
2278 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2279 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2280 call.GetDocumentation() | |
2281 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2282 .SetSummary("Set attachment") | |
2283 .SetDescription("Attach a file to the given DICOM " + r + | |
2284 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
2285 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
2286 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
2287 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
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2288 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
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2289 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
4414 | 2290 return; |
2291 } | |
2292 | |
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2293 ServerContext& context = OrthancRestApi::GetContext(call); |
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2294 CheckValidResourceType(call); |
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2295 |
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2296 std::string publicId = call.GetUriComponent("id", ""); |
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2297 std::string name = call.GetUriComponent("name", ""); |
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2298 |
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2299 FileContentType contentType = StringToContentType(name); |
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2300 if (IsUserContentType(contentType)) // It is forbidden to modify internal attachments |
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2301 { |
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2302 int64_t oldRevision; |
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2303 std::string oldMD5; |
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2304 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
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2305 |
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2306 if (!hasOldRevision) |
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2307 { |
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2308 OrthancConfiguration::ReaderLock lock; |
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2309 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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2310 { |
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2311 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
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2312 // the actual value of "oldRevision" if the metadata is |
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2313 // inexistent as expected |
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2314 hasOldRevision = true; |
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2315 oldRevision = -1; // dummy value |
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2316 oldMD5.clear(); // dummy value |
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2317 } |
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2318 } |
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2319 |
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2320 int64_t newRevision; |
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2321 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
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2322 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
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2323 |
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2324 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
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2325 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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2326 } |
2128
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2327 else |
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2328 { |
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|
2329 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
changeset
|
2330 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2331 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2332 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2333 |
974 | 2334 static void DeleteAttachment(RestApiDeleteCall& call) |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2335 { |
4413 | 2336 if (call.IsDocumentation()) |
2337 { | |
2338 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2339 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2340 call.GetDocumentation() | |
2341 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2342 .SetSummary("Delete attachment") | |
4414 | 2343 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
2344 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
4413 | 2345 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2346 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2347 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2348 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
4413 | 2349 return; |
2350 } | |
2351 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2352 CheckValidResourceType(call); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2353 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2354 std::string publicId = call.GetUriComponent("id", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2355 std::string name = call.GetUriComponent("name", ""); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2356 FileContentType contentType = StringToContentType(name); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2357 |
2128
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Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
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|
2358 bool allowed; |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2359 if (IsUserContentType(contentType)) |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2360 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2361 allowed = true; |
9329ba17a069
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Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
changeset
|
2362 } |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
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|
2363 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2364 { |
2940
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2365 OrthancConfiguration::ReaderLock lock; |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2366 |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2367 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2368 contentType == FileContentType_DicomAsJson) |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2369 { |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2370 allowed = true; |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2371 } |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2372 else |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2373 { |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2374 // It is forbidden to delete internal attachments, except for |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2375 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2376 // would be automatically reconstructed on the next GET call) |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2377 allowed = false; |
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2378 } |
2128
9329ba17a069
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2127
diff
changeset
|
2379 } |
9329ba17a069
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2127
diff
changeset
|
2380 |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
changeset
|
2381 if (allowed) |
751
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refactoring of OrthancRestApi
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diff
changeset
|
2382 { |
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2383 bool found; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2384 int64_t revision; |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2385 std::string md5; |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2386 if (GetRevisionHeader(revision, md5, call, "if-match")) |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2387 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2388 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
4627
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2389 } |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2390 else |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2391 { |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2392 OrthancConfiguration::ReaderLock lock; |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
changeset
|
2393 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2394 { |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2395 throw OrthancException(ErrorCode_Revision, |
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2396 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2397 } |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2398 else |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2399 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2400 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2401 false, -1 /* dummy value */, "" /* dummy value */); |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2402 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2403 } |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2404 |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2405 if (found) |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2406 { |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2407 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2408 } |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2409 else |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2410 { |
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2411 throw OrthancException(ErrorCode_UnknownResource); |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2412 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2413 } |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2414 else |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2415 { |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
changeset
|
2416 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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2127
diff
changeset
|
2417 } |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2418 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2419 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2420 |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2421 template <enum CompressionType compression> |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2422 static void ChangeAttachmentCompression(RestApiPostCall& call) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2423 { |
4413 | 2424 if (call.IsDocumentation()) |
2425 { | |
2426 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2427 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
2428 call.GetDocumentation() | |
2429 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2430 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
2431 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
2432 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
4414 | 2433 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
4413 | 2434 return; |
2435 } | |
2436 | |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2437 CheckValidResourceType(call); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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1556
diff
changeset
|
2438 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2439 std::string publicId = call.GetUriComponent("id", ""); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2440 std::string name = call.GetUriComponent("name", ""); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2441 FileContentType contentType = StringToContentType(name); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
2442 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2443 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2444 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2445 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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1556
diff
changeset
|
2446 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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1556
diff
changeset
|
2447 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2448 static void IsAttachmentCompressed(RestApiGetCall& call) |
f5ddbd9239dd
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diff
changeset
|
2449 { |
4413 | 2450 if (call.IsDocumentation()) |
2451 { | |
2452 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
2453 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
4627
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
2454 AddAttachmentDocumentation(call, r); |
4413 | 2455 call.GetDocumentation() |
2456 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
2457 .SetSummary("Is attachment compressed?") | |
2458 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
2459 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
2460 return; | |
2461 } | |
2462 | |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2463 FileInfo info; |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
2464 if (GetAttachmentInfo(info, call)) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
2465 { |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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1556
diff
changeset
|
2466 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2467 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2468 } |
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2469 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2470 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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parents:
1556
diff
changeset
|
2471 |
782 | 2472 // Raw access to the DICOM tags of an instance ------------------------------ |
2473 | |
974 | 2474 static void GetRawContent(RestApiGetCall& call) |
782 | 2475 { |
4405
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gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2476 if (call.IsDocumentation()) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2477 { |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2478 call.GetDocumentation() |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2479 .SetTag("Instances") |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
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|
2480 .SetSummary("Get raw tag") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2481 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2482 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
5466f336b09f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2483 .SetUriArgument("...", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2484 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2485 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
5466f336b09f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2486 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2487 "or JSON array containing the list of available tags if accessing a dataset"); |
5466f336b09f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2488 return; |
5466f336b09f
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2489 } |
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gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2490 |
782 | 2491 std::string id = call.GetUriComponent("id", ""); |
2492 | |
2493 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
2494 | |
2495 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
2496 } | |
2497 | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2498 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2499 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2500 static bool ExtractSharedTags(Json::Value& shared, |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2501 ServerContext& context, |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2502 const std::string& publicId) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2503 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
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|
2504 // Retrieve all the instances of this patient/study/series |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2505 typedef std::list<std::string> Instances; |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
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|
2506 Instances instances; |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2507 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2508 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2509 // Loop over the instances |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
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|
2510 bool isFirst = true; |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2511 shared = Json::objectValue; |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2512 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2513 for (Instances::const_iterator it = instances.begin(); |
1303 | 2514 it != instances.end(); ++it) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2515 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2516 // Get the tags of the current instance, in the simplified format |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2517 Json::Value tags; |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2518 |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2519 try |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2520 { |
2124 | 2521 context.ReadDicomAsJson(tags, *it); |
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2522 } |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2523 catch (OrthancException&) |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2524 { |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2525 // Race condition: This instance has been removed since |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2526 // (*). Ignore this instance. |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2527 continue; |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2528 } |
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2529 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2530 if (tags.type() != Json::objectValue) |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2531 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2532 return false; // Error |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2533 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2534 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2535 // Only keep the tags that are mapped to a string |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2536 Json::Value::Members members = tags.getMemberNames(); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2537 for (size_t i = 0; i < members.size(); i++) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2538 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2539 const Json::Value& tag = tags[members[i]]; |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2540 if (tag.type() != Json::objectValue || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2541 tag["Type"].type() != Json::stringValue || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2542 tag["Type"].asString() != "String") |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2543 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2544 tags.removeMember(members[i]); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2545 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2546 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2547 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2548 if (isFirst) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2549 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2550 // This is the first instance, keep its tags as such |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2551 shared = tags; |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2552 isFirst = false; |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2553 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2554 else |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2555 { |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2556 // Loop over all the members of the shared tags extracted so |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2557 // far. If the value of one of these tags does not match its |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2558 // value in the current instance, remove it. |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2559 members = shared.getMemberNames(); |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2560 for (size_t i = 0; i < members.size(); i++) |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
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|
2561 { |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2562 if (!tags.isMember(members[i]) || |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2563 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
958
1fbe89dc18b5
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2564 { |
1fbe89dc18b5
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2565 shared.removeMember(members[i]); |
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diff
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|
2566 } |
1fbe89dc18b5
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parents:
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diff
changeset
|
2567 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2568 } |
1fbe89dc18b5
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2569 } |
1fbe89dc18b5
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diff
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|
2570 |
960
abac5c83134f
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|
2571 return true; |
abac5c83134f
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diff
changeset
|
2572 } |
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diff
changeset
|
2573 |
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diff
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|
2574 |
974 | 2575 static void GetSharedTags(RestApiGetCall& call) |
960
abac5c83134f
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diff
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|
2576 { |
4416
0b27841950d5
openapi about creation of zip/media archives
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diff
changeset
|
2577 if (call.IsDocumentation()) |
0b27841950d5
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diff
changeset
|
2578 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
2579 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
2580 |
4416
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|
2581 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
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|
2582 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
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|
2583 call.GetDocumentation() |
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|
2584 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
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|
2585 .SetSummary("Get shared tags") |
0b27841950d5
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|
2586 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
0b27841950d5
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diff
changeset
|
2587 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
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|
2588 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
0b27841950d5
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diff
changeset
|
2589 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2590 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2591 return; |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2592 } |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2593 |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2594 ServerContext& context = OrthancRestApi::GetContext(call); |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2595 std::string publicId = call.GetUriComponent("id", ""); |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2596 |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2597 Json::Value sharedTags; |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2598 if (ExtractSharedTags(sharedTags, context, publicId)) |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2599 { |
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2600 // Success: Send the value of the shared tags |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2601 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2602 } |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2603 } |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2604 |
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2605 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2606 template <enum ResourceType resourceType, |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2607 enum DicomModule module> |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2608 static void GetModule(RestApiGetCall& call) |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2609 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2610 if (call.IsDocumentation()) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2611 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2612 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2613 std::string m; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2614 switch (module) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2615 { |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2616 case DicomModule_Patient: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2617 m = "patient"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2618 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2619 case DicomModule_Study: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2620 m = "study"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2621 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2622 case DicomModule_Series: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2623 m = "series"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2624 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2625 case DicomModule_Instance: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2626 m = "instance"; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2627 break; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2628 default: |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2629 throw OrthancException(ErrorCode_ParameterOutOfRange); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2630 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2631 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2632 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2633 |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2634 call.GetDocumentation() |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2635 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2636 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2637 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2638 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2639 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2640 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2641 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2642 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2643 return; |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2644 } |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2645 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2646 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2647 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2648 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2649 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2650 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2651 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2652 { |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2653 throw OrthancException(ErrorCode_NotImplemented); |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2654 } |
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2655 |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2656 ServerContext& context = OrthancRestApi::GetContext(call); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2657 std::string publicId = call.GetUriComponent("id", ""); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2658 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2659 std::set<DicomTag> ignoreTagLength; |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2660 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2661 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2662 typedef std::set<DicomTag> ModuleTags; |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2663 ModuleTags moduleTags; |
1368 | 2664 DicomTag::AddTagsForModule(moduleTags, module); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2665 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2666 Json::Value tags; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2667 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2668 if (resourceType != ResourceType_Instance) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2669 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2670 // Retrieve all the instances of this patient/study/series |
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retrieve values of modules
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diff
changeset
|
2671 typedef std::list<std::string> Instances; |
81134ea872ff
retrieve values of modules
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parents:
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diff
changeset
|
2672 Instances instances; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2673 context.GetIndex().GetChildInstances(instances, publicId); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2674 |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2675 if (instances.empty()) |
81134ea872ff
retrieve values of modules
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parents:
960
diff
changeset
|
2676 { |
81134ea872ff
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2677 return; // Error: No instance (should never happen) |
81134ea872ff
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2678 } |
81134ea872ff
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2679 |
81134ea872ff
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2680 // Select one child instance |
81134ea872ff
retrieve values of modules
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diff
changeset
|
2681 publicId = instances.front(); |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2682 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2683 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2684 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2685 |
81134ea872ff
retrieve values of modules
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parents:
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diff
changeset
|
2686 // Filter the tags of the instance according to the module |
81134ea872ff
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parents:
960
diff
changeset
|
2687 Json::Value result = Json::objectValue; |
1303 | 2688 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2689 { |
1276
6164f7200c43
refactoring modules
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parents:
1201
diff
changeset
|
2690 std::string s = tag->Format(); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2691 if (tags.isMember(s)) |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2692 { |
81134ea872ff
retrieve values of modules
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parents:
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diff
changeset
|
2693 result[s] = tags[s]; |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2694 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
2695 } |
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
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2696 |
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2697 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
963
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|
2698 } |
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2699 |
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|
2700 |
1722 | 2701 namespace |
2702 { | |
2703 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
2704 } | |
2705 | |
2706 | |
2707 static void AccumulateLookupResults(LookupResults& result, | |
1718
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|
2708 ServerIndex& index, |
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|
2709 const DicomTag& tag, |
1719
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|
2710 const std::string& value, |
3b1f7e706d38
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2711 ResourceType level) |
1718
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2712 { |
3034
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diff
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|
2713 std::vector<std::string> tmp; |
1728
4941494b5dd8
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|
2714 index.LookupIdentifierExact(tmp, level, tag, value); |
1719
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|
2715 |
3034
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|
2716 for (size_t i = 0; i < tmp.size(); i++) |
1719
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2717 { |
3034
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diff
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|
2718 result.push_back(std::make_pair(level, tmp[i])); |
1719
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|
2719 } |
1718
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2720 } |
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2721 |
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2722 |
1139
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|
2723 static void Lookup(RestApiPostCall& call) |
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2724 { |
4422 | 2725 if (call.IsDocumentation()) |
2726 { | |
2727 call.GetDocumentation() | |
2728 .SetTag("System") | |
2729 .SetSummary("Look for DICOM identifiers") | |
2730 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
2731 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
2732 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
2733 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
2734 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
2735 "DICOM resource that is stored by Orthanc"); | |
2736 return; | |
2737 } | |
2738 | |
1446
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|
2739 std::string tag; |
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2740 call.BodyToString(tag); |
1139
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2741 |
1722 | 2742 LookupResults resources; |
1718
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2743 ServerIndex& index = OrthancRestApi::GetIndex(call); |
1719
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2744 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
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|
2745 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
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|
2746 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
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|
2747 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
1718
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|
2748 |
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2749 Json::Value result = Json::arrayValue; |
1722 | 2750 for (LookupResults::const_iterator |
1718
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2751 it = resources.begin(); it != resources.end(); ++it) |
1139
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2752 { |
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2753 ResourceType type = it->first; |
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|
2754 const std::string& id = it->second; |
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2755 |
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2756 Json::Value item = Json::objectValue; |
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2757 item["Type"] = EnumerationToString(type); |
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2758 item["ID"] = id; |
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2759 item["Path"] = GetBasePath(type, id); |
f167b672db94
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2760 |
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|
2761 result.append(item); |
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2762 } |
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diff
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2763 |
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|
2764 call.GetOutput().AnswerJson(result); |
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2765 } |
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|
2766 |
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2767 |
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2768 namespace |
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2769 { |
3021
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diff
changeset
|
2770 class FindVisitor : public ServerContext::ILookupVisitor |
3001
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2771 { |
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2772 private: |
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|
2773 bool isComplete_; |
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|
2774 std::list<std::string> resources_; |
4697
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|
2775 DicomToJsonFormat format_; |
3001
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diff
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2776 |
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diff
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|
2777 public: |
4716 | 2778 explicit FindVisitor(DicomToJsonFormat format) : |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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|
2779 isComplete_(false), |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
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|
2780 format_(format) |
3001
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2781 { |
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2782 } |
4205 | 2783 |
2784 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
3012
af1530b45290
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2785 { |
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2786 return false; // (*) |
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Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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2787 } |
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2788 |
4205 | 2789 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
3001
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2790 { |
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2791 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
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2792 } |
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2793 |
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2794 virtual void Visit(const std::string& publicId, |
3012
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2795 const std::string& instanceId /* unused */, |
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2796 const DicomMap& mainDicomTags /* unused */, |
4205 | 2797 const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE |
3001
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2798 { |
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2799 resources_.push_back(publicId); |
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2800 } |
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2801 |
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2802 void Answer(RestApiOutput& output, |
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2803 ServerIndex& index, |
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2804 ResourceType level, |
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2805 bool expand) const |
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2806 { |
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|
2807 AnswerListOfResources(output, index, resources_, level, expand, format_); |
3001
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2808 } |
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2809 }; |
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2810 } |
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2811 |
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2812 |
1354 | 2813 static void Find(RestApiPostCall& call) |
2814 { | |
2998 | 2815 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
2816 static const char* const KEY_EXPAND = "Expand"; | |
2817 static const char* const KEY_LEVEL = "Level"; | |
2818 static const char* const KEY_LIMIT = "Limit"; | |
2819 static const char* const KEY_QUERY = "Query"; | |
2820 static const char* const KEY_SINCE = "Since"; | |
2821 | |
4421 | 2822 if (call.IsDocumentation()) |
2823 { | |
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2824 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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2825 |
4421 | 2826 call.GetDocumentation() |
2827 .SetTag("System") | |
2828 .SetSummary("Look for local resources") | |
2829 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
2830 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
2831 "https://book.orthanc-server.com/users/rest.html#performing-finds-within-orthanc") | |
2832 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, | |
2833 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
2834 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
2835 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
2836 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
2837 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
2838 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
2839 "Limit the number of reported resources", false) | |
2840 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
2841 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
2842 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, | |
2843 "Associative array containing the filter on the values of the DICOM tags", true) | |
2844 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " | |
2845 "about the reported resources (if `Expand` argument is `true`)"); | |
2846 return; | |
2847 } | |
2848 | |
1358 | 2849 ServerContext& context = OrthancRestApi::GetContext(call); |
1354 | 2850 |
2851 Json::Value request; | |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2852 if (!call.ParseJsonRequest(request) || |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2853 request.type() != Json::objectValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2854 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2855 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2856 "The body must contain a JSON object"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2857 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2858 else if (!request.isMember(KEY_LEVEL) || |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2859 request[KEY_LEVEL].type() != Json::stringValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2860 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2861 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2862 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2863 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2864 else if (!request.isMember(KEY_QUERY) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2865 request[KEY_QUERY].type() != Json::objectValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2866 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2867 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2868 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2869 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2870 else if (request.isMember(KEY_CASE_SENSITIVE) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2871 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2872 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2873 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2874 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" should be a Boolean"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2875 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2876 else if (request.isMember(KEY_LIMIT) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2877 request[KEY_LIMIT].type() != Json::intValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2878 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2879 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2880 "Field \"" + std::string(KEY_LIMIT) + "\" should be an integer"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2881 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2882 else if (request.isMember(KEY_SINCE) && |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2883 request[KEY_SINCE].type() != Json::intValue) |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2884 { |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2885 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2886 "Field \"" + std::string(KEY_SINCE) + "\" should be an integer"); |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2887 } |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2888 else |
1354 | 2889 { |
2890 bool expand = false; | |
2998 | 2891 if (request.isMember(KEY_EXPAND)) |
1354 | 2892 { |
2998 | 2893 expand = request[KEY_EXPAND].asBool(); |
1354 | 2894 } |
2895 | |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2896 bool caseSensitive = false; |
2998 | 2897 if (request.isMember(KEY_CASE_SENSITIVE)) |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2898 { |
2998 | 2899 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2900 } |
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2901 |
1758 | 2902 size_t limit = 0; |
2998 | 2903 if (request.isMember(KEY_LIMIT)) |
1758 | 2904 { |
2998 | 2905 int tmp = request[KEY_LIMIT].asInt(); |
1847 | 2906 if (tmp < 0) |
1758 | 2907 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2908 throw OrthancException(ErrorCode_ParameterOutOfRange, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2909 "Field \"" + std::string(KEY_LIMIT) + "\" should be a positive integer"); |
1758 | 2910 } |
1847 | 2911 |
2912 limit = static_cast<size_t>(tmp); | |
1758 | 2913 } |
2914 | |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2915 size_t since = 0; |
2998 | 2916 if (request.isMember(KEY_SINCE)) |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2917 { |
2998 | 2918 int tmp = request[KEY_SINCE].asInt(); |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2919 if (tmp < 0) |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2920 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2921 throw OrthancException(ErrorCode_ParameterOutOfRange, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2922 "Field \"" + std::string(KEY_SINCE) + "\" should be a positive integer"); |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2923 } |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2924 |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2925 since = static_cast<size_t>(tmp); |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2926 } |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2927 |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2928 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
1360 | 2929 |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2930 DatabaseLookup query; |
1358 | 2931 |
2998 | 2932 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
1354 | 2933 for (size_t i = 0; i < members.size(); i++) |
2934 { | |
2998 | 2935 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
1354 | 2936 { |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2937 throw OrthancException(ErrorCode_BadRequest, |
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2938 "Tag \"" + members[i] + "\" should be associated with a string"); |
1354 | 2939 } |
2940 | |
3163
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2941 const std::string value = request[KEY_QUERY][members[i]].asString(); |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2942 |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2943 if (!value.empty()) |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2944 { |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2945 // An empty string corresponds to an universal constraint, |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2946 // so we ignore it. This mimics the behavior of class |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2947 // "OrthancFindRequestHandler" |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2948 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2949 value, caseSensitive, true); |
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2950 } |
1361
94ffb597d297
refactoring of C-Find SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1360
diff
changeset
|
2951 } |
2876 | 2952 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2953 FindVisitor visitor(OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human)); |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2954 context.Apply(visitor, query, level, since, limit); |
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2955 visitor.Answer(call.GetOutput(), context.GetIndex(), level, expand); |
1354 | 2956 } |
2957 } | |
2958 | |
2959 | |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
2960 template <enum ResourceType start, |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
2961 enum ResourceType end> |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2962 static void GetChildResources(RestApiGetCall& call) |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
2963 { |
4415 | 2964 if (call.IsDocumentation()) |
2965 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2966 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
2967 |
4415 | 2968 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
2969 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
2970 call.GetDocumentation() | |
2971 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
2972 .SetSummary("Get child " + children) | |
2973 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2974 resource + " whose Orthanc identifier is provided in the URL") |
4415 | 2975 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
2976 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) | |
2977 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
2978 return; | |
2979 } | |
2980 | |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
2981 ServerIndex& index = OrthancRestApi::GetIndex(call); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2982 |
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
2983 std::list<std::string> a, b, c; |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2984 a.push_back(call.GetUriComponent("id", "")); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2985 |
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
2986 ResourceType type = start; |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
2987 while (type != end) |
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
2988 { |
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
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1139
diff
changeset
|
2989 b.clear(); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2990 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2991 for (std::list<std::string>::const_iterator |
1303 | 2992 it = a.begin(); it != a.end(); ++it) |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2993 { |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2994 index.GetChildren(c, *it); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2995 b.splice(b.begin(), c); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2996 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2997 |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
2998 type = GetChildResourceType(type); |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2999 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3000 a.clear(); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3001 a.splice(a.begin(), b); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3002 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3003 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3004 Json::Value result = Json::arrayValue; |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3005 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3006 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3007 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3008 for (std::list<std::string>::const_iterator |
1303 | 3009 it = a.begin(); it != a.end(); ++it) |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3010 { |
4554 | 3011 Json::Value resource; |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3012 if (OrthancRestApi::GetIndex(call).ExpandResource(resource, *it, end, format)) |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3013 { |
4554 | 3014 result.append(resource); |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3015 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3016 } |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3017 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3018 call.GetOutput().AnswerJson(result); |
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3019 } |
94c5f6623b3a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3020 |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3021 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3022 static void GetChildInstancesTags(RestApiGetCall& call) |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3023 { |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3024 if (call.IsDocumentation()) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3025 { |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3026 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3027 |
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3028 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3029 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3030 call.GetDocumentation() |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3031 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3032 .SetSummary("Get tags of instances") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3033 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3034 " whose Orthanc identifier is provided in the URL") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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4415
diff
changeset
|
3035 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3036 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
4416
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3037 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3038 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3039 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3040 return; |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3041 } |
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3042 |
1166
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Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
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|
3043 ServerContext& context = OrthancRestApi::GetContext(call); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3044 std::string publicId = call.GetUriComponent("id", ""); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
3045 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
1166
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3046 |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3047 std::set<DicomTag> ignoreTagLength; |
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3048 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3049 |
1166
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3050 // Retrieve all the instances of this patient/study/series |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3051 typedef std::list<std::string> Instances; |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3052 Instances instances; |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3053 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3054 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3055 |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
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1172
diff
changeset
|
3056 Json::Value result = Json::objectValue; |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3057 |
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3058 for (Instances::const_iterator it = instances.begin(); |
1303 | 3059 it != instances.end(); ++it) |
1166
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3060 { |
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
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1146
diff
changeset
|
3061 Json::Value full; |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3062 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
3063 |
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3064 if (format != DicomToJsonFormat_Full) |
1166
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diff
changeset
|
3065 { |
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3066 Json::Value simplified; |
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
3067 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
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1172
diff
changeset
|
3068 result[*it] = simplified; |
1166
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diff
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|
3069 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3070 else |
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3071 { |
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3072 result[*it] = full; |
1166
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diff
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|
3073 } |
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diff
changeset
|
3074 } |
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diff
changeset
|
3075 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3076 call.GetOutput().AnswerJson(result); |
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diff
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|
3077 } |
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diff
changeset
|
3078 |
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diff
changeset
|
3079 |
1140
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diff
changeset
|
3080 |
1281
8dac11c78d71
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diff
changeset
|
3081 template <enum ResourceType start, |
8dac11c78d71
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diff
changeset
|
3082 enum ResourceType end> |
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diff
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|
3083 static void GetParentResource(RestApiGetCall& call) |
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|
3084 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3085 assert(start > end); |
8dac11c78d71
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diff
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|
3086 |
4415 | 3087 if (call.IsDocumentation()) |
3088 { | |
4697
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3089 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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diff
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|
3090 |
4415 | 3091 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
3092 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
3093 call.GetDocumentation() | |
3094 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
3095 .SetSummary("Get parent " + parent) | |
3096 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
4416
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|
3097 resource + " whose Orthanc identifier is provided in the URL") |
4415 | 3098 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
3099 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
3100 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
3101 return; | |
3102 } | |
3103 | |
1281
8dac11c78d71
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
3104 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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changeset
|
3105 |
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diff
changeset
|
3106 std::string current = call.GetUriComponent("id", ""); |
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diff
changeset
|
3107 ResourceType currentType = start; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3108 while (currentType > end) |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3109 { |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3110 std::string parent; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3111 if (!index.LookupParent(parent, current)) |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3112 { |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3113 // Error that could happen if the resource gets deleted by |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3114 // another concurrent call |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3115 return; |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3116 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3117 |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3118 current = parent; |
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3119 currentType = GetParentResourceType(currentType); |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3120 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3121 |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3122 assert(currentType == end); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3123 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3124 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3125 |
4554 | 3126 Json::Value resource; |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3127 if (OrthancRestApi::GetIndex(call).ExpandResource(resource, current, end, format)) |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3128 { |
4554 | 3129 call.GetOutput().AnswerJson(resource); |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3130 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3131 } |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3132 |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3133 |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3134 static void ExtractPdf(RestApiGetCall& call) |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3135 { |
4407 | 3136 if (call.IsDocumentation()) |
3137 { | |
3138 call.GetDocumentation() | |
3139 .SetTag("Instances") | |
3140 .SetSummary("Get embedded PDF") | |
3141 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
3142 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
3143 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
3144 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
3145 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
3146 return; | |
3147 } | |
3148 | |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3149 const std::string id = call.GetUriComponent("id", ""); |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3150 std::string pdf; |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3151 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3152 |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3153 if (locker.GetDicom().ExtractPdf(pdf)) |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3154 { |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3155 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3156 return; |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3157 } |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3158 } |
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3159 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3160 |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3161 static void OrderSlices(RestApiGetCall& call) |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3162 { |
4421 | 3163 if (call.IsDocumentation()) |
3164 { | |
3165 call.GetDocumentation() | |
3166 .SetDeprecated() | |
3167 .SetTag("Series") | |
3168 .SetSummary("Order the slices") | |
3169 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
3170 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
3171 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
3172 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
3173 "Ordered list of paths to DICOM instances") | |
3174 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
3175 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
3176 "in the case of multiframe images.") | |
3177 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
3178 "Same information as the `Slices` field, but in a compact form") | |
3179 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
3180 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
3181 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); | |
3182 return; | |
3183 } | |
3184 | |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3185 const std::string id = call.GetUriComponent("id", ""); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3186 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3187 ServerIndex& index = OrthancRestApi::GetIndex(call); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3188 SliceOrdering ordering(index, id); |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3189 |
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3190 Json::Value result; |
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3191 ordering.Format(result); |
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3192 call.GetOutput().AnswerJson(result); |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3193 } |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3194 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3195 |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3196 static void GetInstanceHeader(RestApiGetCall& call) |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3197 { |
4404 | 3198 if (call.IsDocumentation()) |
3199 { | |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3200 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
4404 | 3201 call.GetDocumentation() |
3202 .SetTag("Instances") | |
3203 .SetSummary("Get DICOM meta-header") | |
3204 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
3205 "combines hexadecimal tags with human-readable description.") | |
3206 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
3207 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
3208 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); | |
3209 return; | |
3210 } | |
3211 | |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3212 ServerContext& context = OrthancRestApi::GetContext(call); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3213 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3214 std::string publicId = call.GetUriComponent("id", ""); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3215 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3216 std::string dicomContent; |
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
3217 context.ReadDicomForHeader(dicomContent, publicId); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3218 |
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3219 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3220 // speed up things here |
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3221 |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3222 ParsedDicomFile dicom(dicomContent); |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3223 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3224 Json::Value header; |
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3225 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3226 |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3227 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3228 } |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3229 |
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3230 |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3231 static void InvalidateTags(RestApiPostCall& call) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3232 { |
4420 | 3233 if (call.IsDocumentation()) |
3234 { | |
3235 call.GetDocumentation() | |
3236 .SetTag("System") | |
3237 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
3238 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
3239 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
3240 "This is notably useful after changes to the `Dictionary` configuration option. " | |
3241 "https://book.orthanc-server.com/faq/orthanc-storage.html#storage-area"); | |
3242 return; | |
3243 } | |
3244 | |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3245 ServerIndex& index = OrthancRestApi::GetIndex(call); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3246 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3247 // Loop over the instances, grouping them by parent studies so as |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3248 // to avoid large memory consumption |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3249 std::list<std::string> studies; |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3250 index.GetAllUuids(studies, ResourceType_Study); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3251 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3252 for (std::list<std::string>::const_iterator |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3253 study = studies.begin(); study != studies.end(); ++study) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3254 { |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3255 std::list<std::string> instances; |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3256 index.GetChildInstances(instances, *study); |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3257 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3258 for (std::list<std::string>::const_iterator |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3259 instance = instances.begin(); instance != instances.end(); ++instance) |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3260 { |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3261 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3262 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3263 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3264 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3265 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3266 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3267 } |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3268 |
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3269 |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3270 template <enum ResourceType type> |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3271 static void ReconstructResource(RestApiPostCall& call) |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3272 { |
4420 | 3273 if (call.IsDocumentation()) |
3274 { | |
3275 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
3276 call.GetDocumentation() | |
3277 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
3278 .SetSummary("Reconstruct tags of " + resource) | |
3279 .SetDescription("Reconstruct the main DICOM tags of the " + resource + " whose Orthanc identifier is provided " | |
3280 "in the URL. This is useful if child studies/series/instances have inconsistent values for " | |
3281 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
3282 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
3283 "parsed again, and the Orthanc index will be updated accordingly.") | |
3284 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
3285 return; | |
3286 } | |
3287 | |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3288 ServerContext& context = OrthancRestApi::GetContext(call); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3289 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", "")); |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3290 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3291 } |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3292 |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3293 |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3294 static void ReconstructAllResources(RestApiPostCall& call) |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3295 { |
4420 | 3296 if (call.IsDocumentation()) |
3297 { | |
3298 call.GetDocumentation() | |
3299 .SetTag("System") | |
3300 .SetSummary("Reconstruct all the index") | |
3301 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
3302 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
3303 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
3304 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated."); | |
3305 return; | |
3306 } | |
3307 | |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3308 ServerContext& context = OrthancRestApi::GetContext(call); |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3309 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3310 std::list<std::string> studies; |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3311 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3312 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3313 for (std::list<std::string>::const_iterator |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3314 study = studies.begin(); study != studies.end(); ++study) |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3315 { |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3316 ServerToolbox::ReconstructResource(context, *study); |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3317 } |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3318 |
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3319 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3320 } |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3321 |
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3322 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3323 static void GetBulkChildren(std::set<std::string>& target, |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3324 ServerIndex& index, |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3325 const std::set<std::string>& source) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3326 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3327 target.clear(); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3328 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3329 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3330 it = source.begin(); it != source.end(); ++it) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3331 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3332 std::list<std::string> children; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3333 index.GetChildren(children, *it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3334 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3335 for (std::list<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3336 child = children.begin(); child != children.end(); ++child) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3337 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3338 target.insert(*child); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3339 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3340 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3341 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3342 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3343 |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3344 static void AddMetadata(Json::Value& target, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3345 ServerIndex& index, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3346 const std::string& resource, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3347 ResourceType level) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3348 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3349 target = Json::objectValue; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3350 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3351 std::map<MetadataType, std::string> content; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3352 index.GetAllMetadata(content, resource, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3353 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3354 for (std::map<MetadataType, std::string>::const_iterator |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3355 it = content.begin(); it != content.end(); ++it) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3356 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3357 target[EnumerationToString(it->first)] = it->second; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4699
diff
changeset
|
3358 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
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4699
diff
changeset
|
3359 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3360 |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4699
diff
changeset
|
3361 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3362 static void BulkContent(RestApiPostCall& call) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
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4697
diff
changeset
|
3363 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3364 static const char* const LEVEL = "Level"; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4699
diff
changeset
|
3365 static const char* const METADATA = "Metadata"; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3366 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
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4697
diff
changeset
|
3367 if (call.IsDocumentation()) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
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4697
diff
changeset
|
3368 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
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4697
diff
changeset
|
3369 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
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4697
diff
changeset
|
3370 |
d16c3c7f11ef
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diff
changeset
|
3371 call.GetDocumentation() |
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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4697
diff
changeset
|
3372 .SetTag("System") |
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
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4697
diff
changeset
|
3373 .SetSummary("Describe a set of instances") |
d16c3c7f11ef
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4697
diff
changeset
|
3374 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
4699
facea16b055b
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Sebastien Jodogne <s.jodogne@gmail.com>
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4698
diff
changeset
|
3375 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4699
diff
changeset
|
3376 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
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4698
diff
changeset
|
3377 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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4698
diff
changeset
|
3378 "`Instance`). Orthanc will loop over the items inside `Resources`, and explorer upward or " |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3379 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3380 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3381 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3382 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3383 "whose identifiers are provided in the `Resources` field, in one single call."); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3384 return; |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3385 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3386 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3387 Json::Value request; |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3388 if (!call.ParseJsonRequest(request) || |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3389 request.type() != Json::objectValue) |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3390 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3391 throw OrthancException(ErrorCode_BadRequest, |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3392 "The body must contain a JSON object"); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3393 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3394 else |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3395 { |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3396 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3397 |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3398 bool metadata = true; |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3399 if (request.isMember(METADATA)) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3400 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3401 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3402 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3403 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3404 ServerIndex& index = OrthancRestApi::GetIndex(call); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3405 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3406 Json::Value answer = Json::arrayValue; |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3407 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3408 if (request.isMember(LEVEL)) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3409 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3410 // Complex case: Need to explore the DICOM hierarchy |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3411 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3412 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3413 std::set<std::string> resources; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3414 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3415 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3416 std::set<std::string> interest; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3417 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3418 assert(ResourceType_Patient < ResourceType_Study && |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3419 ResourceType_Study < ResourceType_Series && |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3420 ResourceType_Series < ResourceType_Instance); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3421 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3422 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3423 it = resources.begin(); it != resources.end(); ++it) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3424 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3425 ResourceType type; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3426 if (index.LookupResourceType(type, *it)) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3427 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3428 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3429 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3430 // This resource is already from the level of interest |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3431 interest.insert(*it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3432 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3433 else if (type < level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3434 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3435 // Need to explore children |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3436 std::set<std::string> current; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3437 current.insert(*it); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3438 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3439 for (;;) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3440 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3441 std::set<std::string> children; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3442 GetBulkChildren(children, index, current); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3443 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3444 type = GetChildResourceType(type); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3445 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3446 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3447 for (std::set<std::string>::const_iterator |
4716 | 3448 it2 = children.begin(); it2 != children.end(); ++it2) |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3449 { |
4716 | 3450 interest.insert(*it2); |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3451 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3452 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3453 break; // done |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3454 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3455 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3456 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3457 current.swap(children); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3458 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3459 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3460 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3461 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3462 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3463 // Need to explore parents |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3464 std::string current = *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3465 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3466 for (;;) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3467 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3468 std::string parent; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3469 if (index.LookupParent(parent, current)) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3470 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3471 type = GetParentResourceType(type); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3472 if (type == level) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3473 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3474 interest.insert(parent); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3475 break; // done |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3476 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3477 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3478 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3479 current = parent; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3480 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3481 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3482 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3483 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3484 break; // The resource has been deleted during the exploration |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3485 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3486 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3487 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3488 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3489 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3490 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3491 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3492 } |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3493 } |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3494 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3495 for (std::set<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3496 it = interest.begin(); it != interest.end(); ++it) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3497 { |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3498 Json::Value item; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3499 if (index.ExpandResource(item, *it, level, format)) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3500 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3501 if (metadata) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3502 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3503 AddMetadata(item[METADATA], index, *it, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3504 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3505 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3506 answer.append(item); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3507 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3508 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3509 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3510 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3511 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3512 // Simple case: We return the queried resources as such |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3513 std::list<std::string> resources; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3514 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3515 |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3516 for (std::list<std::string>::const_iterator |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3517 it = resources.begin(); it != resources.end(); ++it) |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3518 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3519 ResourceType level; |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3520 Json::Value item; |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3521 if (index.LookupResourceType(level, *it) && |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3522 index.ExpandResource(item, *it, level, format)) |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3523 { |
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3524 if (metadata) |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3525 { |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3526 AddMetadata(item[METADATA], index, *it, level); |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3527 } |
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3528 |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3529 answer.append(item); |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3530 } |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3531 else |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3532 { |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3533 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3534 } |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3535 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3536 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3537 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3538 call.GetOutput().AnswerJson(answer); |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3539 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3540 } |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3541 |
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3542 |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3543 static void BulkDelete(RestApiPostCall& call) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3544 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3545 if (call.IsDocumentation()) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3546 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3547 call.GetDocumentation() |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3548 .SetTag("System") |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3549 .SetSummary("Delete a set of instances") |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3550 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3551 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3552 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3553 "whose identifiers are provided in the `Resources` field."); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3554 return; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3555 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3556 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3557 ServerContext& context = OrthancRestApi::GetContext(call); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3558 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3559 Json::Value request; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3560 if (!call.ParseJsonRequest(request) || |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3561 request.type() != Json::objectValue) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3562 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3563 throw OrthancException(ErrorCode_BadRequest, |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3564 "The body must contain a JSON object"); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3565 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3566 else |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3567 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3568 std::set<std::string> resources; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3569 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3570 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3571 for (std::set<std::string>::const_iterator |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3572 it = resources.begin(); it != resources.end(); ++it) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3573 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3574 ResourceType type; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3575 Json::Value remainingAncestor; // Unused |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3576 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3577 if (!context.GetIndex().LookupResourceType(type, *it) || |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3578 !context.DeleteResource(remainingAncestor, *it, type)) |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3579 { |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3580 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3581 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3582 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3583 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3584 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3585 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3586 } |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3587 |
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3588 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3589 void OrthancRestApi::RegisterResources() |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3590 { |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3591 Register("/instances", ListResources<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3592 Register("/patients", ListResources<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3593 Register("/series", ListResources<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3594 Register("/studies", ListResources<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3595 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3596 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3597 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3598 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3599 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3600 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3601 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3602 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3603 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3604 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3605 Register("/instances/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3606 Register("/patients/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3607 Register("/studies/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3608 Register("/series/{id}/statistics", GetResourceStatistics); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3609 |
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3610 Register("/patients/{id}/shared-tags", GetSharedTags); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3611 Register("/series/{id}/shared-tags", GetSharedTags); |
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3612 Register("/studies/{id}/shared-tags", GetSharedTags); |
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
3613 |
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3614 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3615 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3616 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3617 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3618 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3619 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3620 Register("/instances/{id}/file", GetInstanceFile); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3621 Register("/instances/{id}/export", ExportInstanceFile); |
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3622 Register("/instances/{id}/tags", GetInstanceTags); |
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3623 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3624 Register("/instances/{id}/frames", ListFrames); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3625 |
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
3626 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3627 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3628 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3629 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3630 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3631 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3632 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3633 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3634 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
3635 Register("/instances/{id}/frames/{frame}/numpy", GetNumpyFrame); // New in Orthanc 1.9.8 |
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3636 Register("/instances/{id}/pdf", ExtractPdf); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3637 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3638 Register("/instances/{id}/rendered", GetRenderedFrame); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3639 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3640 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3641 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3642 Register("/instances/{id}/matlab", GetMatlabImage); |
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3643 Register("/instances/{id}/header", GetInstanceHeader); |
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
3644 Register("/instances/{id}/numpy", GetNumpyInstance); // New in Orthanc 1.9.8 |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3645 |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3646 Register("/patients/{id}/protected", IsProtectedPatient); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3647 Register("/patients/{id}/protected", SetPatientProtection); |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3648 |
4409 | 3649 std::vector<std::string> resourceTypes; |
3650 resourceTypes.push_back("patients"); | |
3651 resourceTypes.push_back("studies"); | |
3652 resourceTypes.push_back("series"); | |
3653 resourceTypes.push_back("instances"); | |
3654 | |
3655 for (size_t i = 0; i < resourceTypes.size(); i++) | |
3656 { | |
3657 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
3658 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
3659 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
3660 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3661 |
4409 | 3662 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
3663 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
3664 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
3665 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
3666 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
3667 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
3668 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
3669 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
3670 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
3671 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
3672 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
3673 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
3674 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
3675 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); | |
3676 } | |
782 | 3677 |
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3678 Register("/tools/invalidate-tags", InvalidateTags); |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3679 Register("/tools/lookup", Lookup); |
1354 | 3680 Register("/tools/find", Find); |
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3681 |
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3682 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3683 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3684 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3685 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3686 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3687 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3688 |
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3689 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3690 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3691 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3692 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3693 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3694 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3695 |
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3696 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3697 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3698 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3699 |
782 | 3700 Register("/instances/{id}/content/*", GetRawContent); |
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3701 |
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3702 Register("/series/{id}/ordered-slices", OrderSlices); |
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
3703 Register("/series/{id}/numpy", GetNumpySeries); // New in Orthanc 1.9.8 |
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3704 |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3705 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3706 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3707 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3708 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3709 Register("/tools/reconstruct", ReconstructAllResources); |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3710 |
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3711 Register("/tools/bulk-content", BulkContent); |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3712 Register("/tools/bulk-delete", BulkDelete); |
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3713 } |
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3714 } |