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annotate OrthancServer/OrthancRestApi/OrthancRestModalities.cpp @ 850:9ee2e7a5efaf jpeg

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author Sebastien Jodogne <s.jodogne@gmail.com>
date Fri, 06 Jun 2014 09:42:10 +0200
parents 84513f2ee1f3
children 83622b0f544c
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege,
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4 * Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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31
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32
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33 #include "../PrecompiledHeadersServer.h"
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34 #include "OrthancRestApi.h"
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35
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36 #include "../OrthancInitialization.h"
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37 #include "../../Core/HttpClient.h"
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38 #include "../FromDcmtkBridge.h"
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39
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40 #include <glog/logging.h>
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41
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42 namespace Orthanc
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43 {
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44 // DICOM SCU ----------------------------------------------------------------
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45
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46 static bool MergeQueryAndTemplate(DicomMap& result,
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47 const std::string& postData)
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48 {
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49 Json::Value query;
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50 Json::Reader reader;
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51
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52 if (!reader.parse(postData, query) ||
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53 query.type() != Json::objectValue)
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54 {
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55 return false;
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56 }
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57
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58 Json::Value::Members members = query.getMemberNames();
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59 for (size_t i = 0; i < members.size(); i++)
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60 {
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61 DicomTag t = FromDcmtkBridge::ParseTag(members[i]);
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62 result.SetValue(t, query[members[i]].asString());
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63 }
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64
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65 return true;
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66 }
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67
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68 static void DicomFindPatient(RestApi::PostCall& call)
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69 {
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70 ServerContext& context = OrthancRestApi::GetContext(call);
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71
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72 DicomMap m;
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73 DicomMap::SetupFindPatientTemplate(m);
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74 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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75 {
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76 return;
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77 }
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78
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79 RemoteModalityParameters remote = Configuration::GetModalityUsingSymbolicName(call.GetUriComponent("id", ""));
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80 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), remote);
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81
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82 DicomFindAnswers answers;
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83 locker.GetConnection().FindPatient(answers, m);
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84
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85 Json::Value result;
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86 answers.ToJson(result);
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87 call.GetOutput().AnswerJson(result);
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88 }
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89
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90 static void DicomFindStudy(RestApi::PostCall& call)
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91 {
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92 ServerContext& context = OrthancRestApi::GetContext(call);
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93
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94 DicomMap m;
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95 DicomMap::SetupFindStudyTemplate(m);
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96 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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97 {
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98 return;
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99 }
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100
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101 if (m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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102 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2)
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103 {
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104 return;
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105 }
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106
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107 RemoteModalityParameters remote = Configuration::GetModalityUsingSymbolicName(call.GetUriComponent("id", ""));
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108 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), remote);
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109
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110 DicomFindAnswers answers;
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111 locker.GetConnection().FindStudy(answers, m);
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112
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113 Json::Value result;
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114 answers.ToJson(result);
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115 call.GetOutput().AnswerJson(result);
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116 }
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117
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118 static void DicomFindSeries(RestApi::PostCall& call)
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119 {
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120 ServerContext& context = OrthancRestApi::GetContext(call);
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121
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122 DicomMap m;
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123 DicomMap::SetupFindSeriesTemplate(m);
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124 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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125 {
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126 return;
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127 }
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128
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129 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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130 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) ||
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131 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2)
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132 {
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133 return;
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134 }
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135
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136 RemoteModalityParameters remote = Configuration::GetModalityUsingSymbolicName(call.GetUriComponent("id", ""));
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137 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), remote);
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138
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139 DicomFindAnswers answers;
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140 locker.GetConnection().FindSeries(answers, m);
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141
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142 Json::Value result;
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143 answers.ToJson(result);
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144 call.GetOutput().AnswerJson(result);
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145 }
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146
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147 static void DicomFindInstance(RestApi::PostCall& call)
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148 {
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149 ServerContext& context = OrthancRestApi::GetContext(call);
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150
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151 DicomMap m;
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152 DicomMap::SetupFindInstanceTemplate(m);
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153 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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154 {
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155 return;
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156 }
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157
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158 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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159 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) ||
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160 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2 ||
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161 m.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).AsString().size() <= 2)
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162 {
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163 return;
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164 }
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165
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166 RemoteModalityParameters remote = Configuration::GetModalityUsingSymbolicName(call.GetUriComponent("id", ""));
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167 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), remote);
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168
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169 DicomFindAnswers answers;
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170 locker.GetConnection().FindInstance(answers, m);
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171
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172 Json::Value result;
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173 answers.ToJson(result);
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174 call.GetOutput().AnswerJson(result);
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175 }
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176
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177 static void DicomFind(RestApi::PostCall& call)
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178 {
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179 ServerContext& context = OrthancRestApi::GetContext(call);
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180
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181 DicomMap m;
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182 DicomMap::SetupFindPatientTemplate(m);
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183 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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184 {
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185 return;
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186 }
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187
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188 RemoteModalityParameters remote = Configuration::GetModalityUsingSymbolicName(call.GetUriComponent("id", ""));
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189 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), remote);
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190
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191 DicomFindAnswers patients;
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192 locker.GetConnection().FindPatient(patients, m);
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193
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194 // Loop over the found patients
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195 Json::Value result = Json::arrayValue;
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196 for (size_t i = 0; i < patients.GetSize(); i++)
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197 {
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198 Json::Value patient(Json::objectValue);
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199 FromDcmtkBridge::ToJson(patient, patients.GetAnswer(i));
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200
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201 DicomMap::SetupFindStudyTemplate(m);
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202 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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203 {
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204 return;
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205 }
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206 m.CopyTagIfExists(patients.GetAnswer(i), DICOM_TAG_PATIENT_ID);
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207
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208 DicomFindAnswers studies;
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209 locker.GetConnection().FindStudy(studies, m);
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210
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211 patient["Studies"] = Json::arrayValue;
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212
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213 // Loop over the found studies
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214 for (size_t j = 0; j < studies.GetSize(); j++)
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215 {
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216 Json::Value study(Json::objectValue);
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217 FromDcmtkBridge::ToJson(study, studies.GetAnswer(j));
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218
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219 DicomMap::SetupFindSeriesTemplate(m);
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220 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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221 {
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222 return;
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223 }
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224 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_PATIENT_ID);
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225 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_STUDY_INSTANCE_UID);
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226
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227 DicomFindAnswers series;
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228 locker.GetConnection().FindSeries(series, m);
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229
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230 // Loop over the found series
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231 study["Series"] = Json::arrayValue;
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232 for (size_t k = 0; k < series.GetSize(); k++)
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233 {
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234 Json::Value series2(Json::objectValue);
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235 FromDcmtkBridge::ToJson(series2, series.GetAnswer(k));
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236 study["Series"].append(series2);
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237 }
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238
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239 patient["Studies"].append(study);
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240 }
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241
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242 result.append(patient);
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243 }
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244
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245 call.GetOutput().AnswerJson(result);
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246 }
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247
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248
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249 static bool GetInstancesToExport(std::list<std::string>& instances,
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250 const std::string& remote,
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251 RestApi::PostCall& call)
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252 {
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253 ServerContext& context = OrthancRestApi::GetContext(call);
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254
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255 std::string stripped = Toolbox::StripSpaces(call.GetPostBody());
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256
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257 Json::Value request;
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258 if (Toolbox::IsSHA1(stripped))
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259 {
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260 // This is for compatibility with Orthanc <= 0.5.1.
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261 request = stripped;
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262 }
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263 else if (!call.ParseJsonRequest(request))
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264 {
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265 // Bad JSON request
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266 return false;
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267 }
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268
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269 if (request.isString())
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270 {
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271 context.GetIndex().LogExportedResource(request.asString(), remote);
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272 context.GetIndex().GetChildInstances(instances, request.asString());
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273 }
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274 else if (request.isArray())
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275 {
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276 for (Json::Value::ArrayIndex i = 0; i < request.size(); i++)
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277 {
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278 if (!request[i].isString())
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279 {
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280 return false;
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281 }
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282
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283 std::string stripped = Toolbox::StripSpaces(request[i].asString());
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284 if (!Toolbox::IsSHA1(stripped))
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285 {
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286 return false;
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287 }
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288
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289 context.GetIndex().LogExportedResource(stripped, remote);
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290
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291 std::list<std::string> tmp;
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292 context.GetIndex().GetChildInstances(tmp, stripped);
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293
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294 for (std::list<std::string>::const_iterator
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295 it = tmp.begin(); it != tmp.end(); ++it)
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296 {
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297 instances.push_back(*it);
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298 }
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299 }
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300 }
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301 else
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302 {
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303 // Neither a string, nor a list of strings. Bad request.
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304 return false;
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305 }
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306
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307 return true;
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308 }
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309
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310
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311 static void DicomStore(RestApi::PostCall& call)
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312 {
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313 ServerContext& context = OrthancRestApi::GetContext(call);
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314
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315 std::string remote = call.GetUriComponent("id", "");
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316
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317 std::list<std::string> instances;
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318 if (!GetInstancesToExport(instances, remote, call))
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319 {
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320 return;
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321 }
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322
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323 RemoteModalityParameters p = Configuration::GetModalityUsingSymbolicName(remote);
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324 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), p);
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325
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326 for (std::list<std::string>::const_iterator
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327 it = instances.begin(); it != instances.end(); ++it)
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328 {
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329 LOG(INFO) << "Sending resource " << *it << " to modality \"" << remote << "\"";
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330
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331 std::string dicom;
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332 context.ReadFile(dicom, *it, FileContentType_Dicom);
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333 locker.GetConnection().Store(dicom);
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334 }
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335
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336 call.GetOutput().AnswerBuffer("{}", "application/json");
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337 }
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338
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339
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340 // Orthanc Peers ------------------------------------------------------------
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341
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342 static bool IsExistingPeer(const OrthancRestApi::SetOfStrings& peers,
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343 const std::string& id)
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344 {
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345 return peers.find(id) != peers.end();
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346 }
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347
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348 static void ListPeers(RestApi::GetCall& call)
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349 {
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350 OrthancRestApi::SetOfStrings peers;
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351 Configuration::GetListOfOrthancPeers(peers);
751
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352
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353 Json::Value result = Json::arrayValue;
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354 for (OrthancRestApi::SetOfStrings::const_iterator
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355 it = peers.begin(); it != peers.end(); ++it)
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356 {
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357 result.append(*it);
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358 }
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359
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360 call.GetOutput().AnswerJson(result);
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361 }
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362
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363 static void ListPeerOperations(RestApi::GetCall& call)
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diff changeset
364 {
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diff changeset
365 OrthancRestApi::SetOfStrings peers;
810
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366 Configuration::GetListOfOrthancPeers(peers);
751
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367
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368 std::string id = call.GetUriComponent("id", "");
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369 if (IsExistingPeer(peers, id))
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370 {
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371 Json::Value result = Json::arrayValue;
5197fd35333c refactoring of OrthancRestApi
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diff changeset
372 result.append("store");
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diff changeset
373 call.GetOutput().AnswerJson(result);
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374 }
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375 }
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376
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diff changeset
377 static void PeerStore(RestApi::PostCall& call)
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378 {
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diff changeset
379 ServerContext& context = OrthancRestApi::GetContext(call);
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380
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381 std::string remote = call.GetUriComponent("id", "");
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382
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diff changeset
383 std::list<std::string> instances;
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diff changeset
384 if (!GetInstancesToExport(instances, remote, call))
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diff changeset
385 {
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diff changeset
386 return;
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387 }
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diff changeset
388
806
557575fd93e9 refactoring
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diff changeset
389 OrthancPeerParameters peer;
810
401a9633e492 configuration into a namespace
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390 Configuration::GetOrthancPeer(peer, remote);
751
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391
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392 // Configure the HTTP client
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diff changeset
393 HttpClient client;
806
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394 if (peer.GetUsername().size() != 0 &&
557575fd93e9 refactoring
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395 peer.GetPassword().size() != 0)
751
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diff changeset
396 {
806
557575fd93e9 refactoring
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397 client.SetCredentials(peer.GetUsername().c_str(),
557575fd93e9 refactoring
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398 peer.GetPassword().c_str());
751
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diff changeset
399 }
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diff changeset
400
806
557575fd93e9 refactoring
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401 client.SetUrl(peer.GetUrl() + "instances");
751
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diff changeset
402 client.SetMethod(HttpMethod_Post);
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diff changeset
403
5197fd35333c refactoring of OrthancRestApi
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diff changeset
404 // Loop over the instances that are to be sent
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diff changeset
405 for (std::list<std::string>::const_iterator
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diff changeset
406 it = instances.begin(); it != instances.end(); ++it)
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diff changeset
407 {
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diff changeset
408 LOG(INFO) << "Sending resource " << *it << " to peer \"" << remote << "\"";
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parents:
diff changeset
409
5197fd35333c refactoring of OrthancRestApi
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diff changeset
410 context.ReadFile(client.AccessPostData(), *it, FileContentType_Dicom);
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parents:
diff changeset
411
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diff changeset
412 std::string answer;
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
413 if (!client.Apply(answer))
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
414 {
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diff changeset
415 LOG(ERROR) << "Unable to send resource " << *it << " to peer \"" << remote << "\"";
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diff changeset
416 return;
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parents:
diff changeset
417 }
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
418 }
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
419
5197fd35333c refactoring of OrthancRestApi
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diff changeset
420 call.GetOutput().AnswerBuffer("{}", "application/json");
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diff changeset
421 }
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parents:
diff changeset
422
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parents:
diff changeset
423
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diff changeset
424 // DICOM bridge -------------------------------------------------------------
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parents:
diff changeset
425
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426 static bool IsExistingModality(const OrthancRestApi::SetOfStrings& modalities,
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427 const std::string& id)
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428 {
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429 return modalities.find(id) != modalities.end();
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430 }
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431
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432 static void ListModalities(RestApi::GetCall& call)
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433 {
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434 OrthancRestApi::SetOfStrings modalities;
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435 Configuration::GetListOfDicomModalities(modalities);
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436
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437 Json::Value result = Json::arrayValue;
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438 for (OrthancRestApi::SetOfStrings::const_iterator
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439 it = modalities.begin(); it != modalities.end(); ++it)
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440 {
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441 result.append(*it);
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442 }
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443
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444 call.GetOutput().AnswerJson(result);
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445 }
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446
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447
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448 static void ListModalityOperations(RestApi::GetCall& call)
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449 {
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450 OrthancRestApi::SetOfStrings modalities;
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451 Configuration::GetListOfDicomModalities(modalities);
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452
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453 std::string id = call.GetUriComponent("id", "");
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454 if (IsExistingModality(modalities, id))
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455 {
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456 Json::Value result = Json::arrayValue;
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457 result.append("find-patient");
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458 result.append("find-study");
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459 result.append("find-series");
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460 result.append("find-instance");
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461 result.append("find");
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462 result.append("store");
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463 call.GetOutput().AnswerJson(result);
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464 }
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465 }
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466
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467
807
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468 static void UpdateModality(RestApi::PutCall& call)
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469 {
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470 Json::Value json;
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471 Json::Reader reader;
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472 if (reader.parse(call.GetPutBody(), json))
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473 {
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474 RemoteModalityParameters modality;
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475 modality.FromJson(json);
812
8a36c947490c refactoring
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476 Configuration::UpdateModality(call.GetUriComponent("id", ""), modality);
813
Sebastien Jodogne <s.jodogne@gmail.com>
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477 call.GetOutput().AnswerBuffer("", "text/plain");
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478 }
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479 }
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480
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481
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482 static void DeleteModality(RestApi::DeleteCall& call)
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483 {
810
401a9633e492 configuration into a namespace
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484 Configuration::RemoveModality(call.GetUriComponent("id", ""));
813
Sebastien Jodogne <s.jodogne@gmail.com>
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485 call.GetOutput().AnswerBuffer("", "text/plain");
807
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486 }
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487
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488
808
2d9a000aa3a6 update/delete peers
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489 static void UpdatePeer(RestApi::PutCall& call)
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490 {
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491 Json::Value json;
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parents: 807
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492 Json::Reader reader;
2d9a000aa3a6 update/delete peers
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parents: 807
diff changeset
493 if (reader.parse(call.GetPutBody(), json))
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parents: 807
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494 {
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495 OrthancPeerParameters peer;
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496 peer.FromJson(json);
812
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497 Configuration::UpdatePeer(call.GetUriComponent("id", ""), peer);
813
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498 call.GetOutput().AnswerBuffer("", "text/plain");
808
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499 }
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500 }
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501
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502
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503 static void DeletePeer(RestApi::DeleteCall& call)
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504 {
810
401a9633e492 configuration into a namespace
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505 Configuration::RemovePeer(call.GetUriComponent("id", ""));
813
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506 call.GetOutput().AnswerBuffer("", "text/plain");
808
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507 }
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508
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509
751
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510 void OrthancRestApi::RegisterModalities()
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Sebastien Jodogne <s.jodogne@gmail.com>
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511 {
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512 Register("/modalities", ListModalities);
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513 Register("/modalities/{id}", ListModalityOperations);
807
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514 Register("/modalities/{id}", UpdateModality);
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515 Register("/modalities/{id}", DeleteModality);
751
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516 Register("/modalities/{id}/find-patient", DicomFindPatient);
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517 Register("/modalities/{id}/find-study", DicomFindStudy);
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518 Register("/modalities/{id}/find-series", DicomFindSeries);
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519 Register("/modalities/{id}/find-instance", DicomFindInstance);
5197fd35333c refactoring of OrthancRestApi
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520 Register("/modalities/{id}/find", DicomFind);
5197fd35333c refactoring of OrthancRestApi
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521 Register("/modalities/{id}/store", DicomStore);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
522
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Sebastien Jodogne <s.jodogne@gmail.com>
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523 Register("/peers", ListPeers);
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
524 Register("/peers/{id}", ListPeerOperations);
808
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525 Register("/peers/{id}", UpdatePeer);
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parents: 807
diff changeset
526 Register("/peers/{id}", DeletePeer);
751
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
527 Register("/peers/{id}/store", PeerStore);
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diff changeset
528 }
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529 }