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annotate OrthancServer/OrthancRestApi/OrthancRestModalities.cpp @ 751:5197fd35333c

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refactoring of OrthancRestApi
author Sebastien Jodogne <s.jodogne@gmail.com>
date Mon, 14 Apr 2014 11:28:35 +0200
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children 3bd0589af992
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege,
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4 * Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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31
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32
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33 #include "OrthancRestApi.h"
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34
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35 #include "../DicomProtocol/DicomUserConnection.h"
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36 #include "../OrthancInitialization.h"
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37 #include "../../Core/HttpClient.h"
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38
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39 #include <glog/logging.h>
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40
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41 namespace Orthanc
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42 {
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43 // DICOM SCU ----------------------------------------------------------------
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44
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45 static bool MergeQueryAndTemplate(DicomMap& result,
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46 const std::string& postData)
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47 {
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48 Json::Value query;
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49 Json::Reader reader;
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50
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51 if (!reader.parse(postData, query) ||
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52 query.type() != Json::objectValue)
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53 {
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54 return false;
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55 }
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56
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57 Json::Value::Members members = query.getMemberNames();
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58 for (size_t i = 0; i < members.size(); i++)
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59 {
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60 DicomTag t = FromDcmtkBridge::ParseTag(members[i]);
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61 result.SetValue(t, query[members[i]].asString());
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62 }
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63
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64 return true;
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65 }
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66
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67 static void DicomFindPatient(RestApi::PostCall& call)
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68 {
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69 DicomMap m;
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70 DicomMap::SetupFindPatientTemplate(m);
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71 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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72 {
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73 return;
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74 }
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75
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76 DicomUserConnection connection;
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77 ConnectToModalityUsingSymbolicName(connection, call.GetUriComponent("id", ""));
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78
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79 DicomFindAnswers answers;
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80 connection.FindPatient(answers, m);
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81
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82 Json::Value result;
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83 answers.ToJson(result);
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84 call.GetOutput().AnswerJson(result);
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85 }
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86
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87 static void DicomFindStudy(RestApi::PostCall& call)
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88 {
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89 DicomMap m;
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90 DicomMap::SetupFindStudyTemplate(m);
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91 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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92 {
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93 return;
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94 }
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95
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96 if (m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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97 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2)
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98 {
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99 return;
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100 }
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101
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102 DicomUserConnection connection;
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103 ConnectToModalityUsingSymbolicName(connection, call.GetUriComponent("id", ""));
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104
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105 DicomFindAnswers answers;
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106 connection.FindStudy(answers, m);
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107
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108 Json::Value result;
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109 answers.ToJson(result);
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110 call.GetOutput().AnswerJson(result);
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111 }
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112
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113 static void DicomFindSeries(RestApi::PostCall& call)
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114 {
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115 DicomMap m;
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116 DicomMap::SetupFindSeriesTemplate(m);
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117 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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118 {
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119 return;
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120 }
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121
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122 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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123 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) ||
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124 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2)
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125 {
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126 return;
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127 }
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128
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129 DicomUserConnection connection;
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130 ConnectToModalityUsingSymbolicName(connection, call.GetUriComponent("id", ""));
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131
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132 DicomFindAnswers answers;
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133 connection.FindSeries(answers, m);
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134
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135 Json::Value result;
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136 answers.ToJson(result);
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137 call.GetOutput().AnswerJson(result);
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138 }
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139
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140 static void DicomFindInstance(RestApi::PostCall& call)
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141 {
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142 DicomMap m;
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143 DicomMap::SetupFindInstanceTemplate(m);
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144 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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145 {
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146 return;
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147 }
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148
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149 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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150 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) ||
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151 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2 ||
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152 m.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).AsString().size() <= 2)
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153 {
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154 return;
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155 }
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156
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157 DicomUserConnection connection;
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158 ConnectToModalityUsingSymbolicName(connection, call.GetUriComponent("id", ""));
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159
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160 DicomFindAnswers answers;
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161 connection.FindInstance(answers, m);
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162
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163 Json::Value result;
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164 answers.ToJson(result);
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165 call.GetOutput().AnswerJson(result);
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166 }
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167
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168 static void DicomFind(RestApi::PostCall& call)
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169 {
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170 DicomMap m;
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171 DicomMap::SetupFindPatientTemplate(m);
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172 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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173 {
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174 return;
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175 }
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176
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177 DicomUserConnection connection;
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178 ConnectToModalityUsingSymbolicName(connection, call.GetUriComponent("id", ""));
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179
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180 DicomFindAnswers patients;
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181 connection.FindPatient(patients, m);
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182
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183 // Loop over the found patients
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184 Json::Value result = Json::arrayValue;
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185 for (size_t i = 0; i < patients.GetSize(); i++)
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186 {
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187 Json::Value patient(Json::objectValue);
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188 FromDcmtkBridge::ToJson(patient, patients.GetAnswer(i));
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189
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190 DicomMap::SetupFindStudyTemplate(m);
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191 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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192 {
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193 return;
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194 }
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195 m.CopyTagIfExists(patients.GetAnswer(i), DICOM_TAG_PATIENT_ID);
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196
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197 DicomFindAnswers studies;
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198 connection.FindStudy(studies, m);
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199
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200 patient["Studies"] = Json::arrayValue;
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201
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202 // Loop over the found studies
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203 for (size_t j = 0; j < studies.GetSize(); j++)
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204 {
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205 Json::Value study(Json::objectValue);
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206 FromDcmtkBridge::ToJson(study, studies.GetAnswer(j));
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207
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208 DicomMap::SetupFindSeriesTemplate(m);
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209 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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210 {
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211 return;
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212 }
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213 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_PATIENT_ID);
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214 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_STUDY_INSTANCE_UID);
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215
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216 DicomFindAnswers series;
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217 connection.FindSeries(series, m);
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218
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219 // Loop over the found series
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220 study["Series"] = Json::arrayValue;
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221 for (size_t k = 0; k < series.GetSize(); k++)
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222 {
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223 Json::Value series2(Json::objectValue);
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224 FromDcmtkBridge::ToJson(series2, series.GetAnswer(k));
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225 study["Series"].append(series2);
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226 }
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227
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228 patient["Studies"].append(study);
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229 }
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230
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231 result.append(patient);
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232 }
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233
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234 call.GetOutput().AnswerJson(result);
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235 }
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236
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237
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238 static bool GetInstancesToExport(std::list<std::string>& instances,
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239 const std::string& remote,
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240 RestApi::PostCall& call)
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241 {
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242 ServerContext& context = OrthancRestApi::GetContext(call);
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243
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244 std::string stripped = Toolbox::StripSpaces(call.GetPostBody());
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245
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246 Json::Value request;
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247 if (Toolbox::IsSHA1(stripped))
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248 {
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249 // This is for compatibility with Orthanc <= 0.5.1.
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250 request = stripped;
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251 }
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252 else if (!call.ParseJsonRequest(request))
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253 {
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254 // Bad JSON request
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255 return false;
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256 }
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257
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258 if (request.isString())
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259 {
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260 context.GetIndex().LogExportedResource(request.asString(), remote);
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261 context.GetIndex().GetChildInstances(instances, request.asString());
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262 }
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263 else if (request.isArray())
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264 {
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265 for (Json::Value::ArrayIndex i = 0; i < request.size(); i++)
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266 {
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267 if (!request[i].isString())
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268 {
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269 return false;
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270 }
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271
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272 std::string stripped = Toolbox::StripSpaces(request[i].asString());
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273 if (!Toolbox::IsSHA1(stripped))
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274 {
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275 return false;
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276 }
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277
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278 context.GetIndex().LogExportedResource(stripped, remote);
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279
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280 std::list<std::string> tmp;
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281 context.GetIndex().GetChildInstances(tmp, stripped);
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282
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283 for (std::list<std::string>::const_iterator
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284 it = tmp.begin(); it != tmp.end(); ++it)
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285 {
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286 instances.push_back(*it);
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287 }
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288 }
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289 }
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290 else
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291 {
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292 // Neither a string, nor a list of strings. Bad request.
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293 return false;
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294 }
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295
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296 return true;
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297 }
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298
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299
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300 static void DicomStore(RestApi::PostCall& call)
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301 {
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302 ServerContext& context = OrthancRestApi::GetContext(call);
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303
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304 std::string remote = call.GetUriComponent("id", "");
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305
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306 std::list<std::string> instances;
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307 if (!GetInstancesToExport(instances, remote, call))
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308 {
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309 return;
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310 }
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311
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312 DicomUserConnection connection;
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313 ConnectToModalityUsingSymbolicName(connection, remote);
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314
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315 for (std::list<std::string>::const_iterator
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316 it = instances.begin(); it != instances.end(); ++it)
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317 {
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318 LOG(INFO) << "Sending resource " << *it << " to modality \"" << remote << "\"";
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319
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320 std::string dicom;
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321 context.ReadFile(dicom, *it, FileContentType_Dicom);
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322 connection.Store(dicom);
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323 }
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324
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325 call.GetOutput().AnswerBuffer("{}", "application/json");
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326 }
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327
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328
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329 // Orthanc Peers ------------------------------------------------------------
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330
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331 static bool IsExistingPeer(const OrthancRestApi::SetOfStrings& peers,
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332 const std::string& id)
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333 {
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334 return peers.find(id) != peers.end();
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335 }
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336
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337 static void ListPeers(RestApi::GetCall& call)
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338 {
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339 OrthancRestApi::SetOfStrings peers;
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340 GetListOfOrthancPeers(peers);
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341
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342 Json::Value result = Json::arrayValue;
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343 for (OrthancRestApi::SetOfStrings::const_iterator
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344 it = peers.begin(); it != peers.end(); ++it)
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345 {
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346 result.append(*it);
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347 }
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348
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349 call.GetOutput().AnswerJson(result);
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350 }
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351
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352 static void ListPeerOperations(RestApi::GetCall& call)
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353 {
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354 OrthancRestApi::SetOfStrings peers;
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355 GetListOfOrthancPeers(peers);
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356
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357 std::string id = call.GetUriComponent("id", "");
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358 if (IsExistingPeer(peers, id))
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359 {
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360 Json::Value result = Json::arrayValue;
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361 result.append("store");
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362 call.GetOutput().AnswerJson(result);
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363 }
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364 }
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365
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366 static void PeerStore(RestApi::PostCall& call)
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367 {
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368 ServerContext& context = OrthancRestApi::GetContext(call);
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369
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370 std::string remote = call.GetUriComponent("id", "");
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371
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372 std::list<std::string> instances;
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373 if (!GetInstancesToExport(instances, remote, call))
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374 {
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375 return;
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376 }
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377
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378 std::string url, username, password;
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379 GetOrthancPeer(remote, url, username, password);
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380
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381 // Configure the HTTP client
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382 HttpClient client;
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383 if (username.size() != 0 && password.size() != 0)
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diff changeset
384 {
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385 client.SetCredentials(username.c_str(), password.c_str());
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386 }
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diff changeset
387
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388 client.SetUrl(url + "instances");
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389 client.SetMethod(HttpMethod_Post);
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diff changeset
390
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diff changeset
391 // Loop over the instances that are to be sent
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392 for (std::list<std::string>::const_iterator
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diff changeset
393 it = instances.begin(); it != instances.end(); ++it)
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diff changeset
394 {
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diff changeset
395 LOG(INFO) << "Sending resource " << *it << " to peer \"" << remote << "\"";
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diff changeset
396
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diff changeset
397 context.ReadFile(client.AccessPostData(), *it, FileContentType_Dicom);
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diff changeset
398
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diff changeset
399 std::string answer;
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diff changeset
400 if (!client.Apply(answer))
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parents:
diff changeset
401 {
5197fd35333c refactoring of OrthancRestApi
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diff changeset
402 LOG(ERROR) << "Unable to send resource " << *it << " to peer \"" << remote << "\"";
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diff changeset
403 return;
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parents:
diff changeset
404 }
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
405 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
406
5197fd35333c refactoring of OrthancRestApi
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diff changeset
407 call.GetOutput().AnswerBuffer("{}", "application/json");
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parents:
diff changeset
408 }
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parents:
diff changeset
409
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parents:
diff changeset
410
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
411 // DICOM bridge -------------------------------------------------------------
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parents:
diff changeset
412
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diff changeset
413 static bool IsExistingModality(const OrthancRestApi::SetOfStrings& modalities,
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diff changeset
414 const std::string& id)
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parents:
diff changeset
415 {
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diff changeset
416 return modalities.find(id) != modalities.end();
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diff changeset
417 }
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diff changeset
418
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diff changeset
419 static void ListModalities(RestApi::GetCall& call)
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diff changeset
420 {
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diff changeset
421 OrthancRestApi::SetOfStrings modalities;
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diff changeset
422 GetListOfDicomModalities(modalities);
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diff changeset
423
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diff changeset
424 Json::Value result = Json::arrayValue;
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diff changeset
425 for (OrthancRestApi::SetOfStrings::const_iterator
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diff changeset
426 it = modalities.begin(); it != modalities.end(); ++it)
5197fd35333c refactoring of OrthancRestApi
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427 {
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428 result.append(*it);
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429 }
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430
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431 call.GetOutput().AnswerJson(result);
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432 }
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433
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434
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435 static void ListModalityOperations(RestApi::GetCall& call)
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436 {
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437 OrthancRestApi::SetOfStrings modalities;
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438 GetListOfDicomModalities(modalities);
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439
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440 std::string id = call.GetUriComponent("id", "");
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441 if (IsExistingModality(modalities, id))
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442 {
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443 Json::Value result = Json::arrayValue;
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444 result.append("find-patient");
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445 result.append("find-study");
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446 result.append("find-series");
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447 result.append("find-instance");
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448 result.append("find");
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449 result.append("store");
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450 call.GetOutput().AnswerJson(result);
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451 }
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452 }
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453
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454
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455 void OrthancRestApi::RegisterModalities()
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456 {
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457 Register("/modalities", ListModalities);
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458 Register("/modalities/{id}", ListModalityOperations);
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459 Register("/modalities/{id}/find-patient", DicomFindPatient);
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460 Register("/modalities/{id}/find-study", DicomFindStudy);
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461 Register("/modalities/{id}/find-series", DicomFindSeries);
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462 Register("/modalities/{id}/find-instance", DicomFindInstance);
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463 Register("/modalities/{id}/find", DicomFind);
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464 Register("/modalities/{id}/store", DicomStore);
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465
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466 Register("/peers", ListPeers);
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467 Register("/peers/{id}", ListPeerOperations);
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468 Register("/peers/{id}/store", PeerStore);
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469 }
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470 }