Mercurial > hg > orthanc

annotate OrthancServer/OrthancRestApi/OrthancRestModalities.cpp @ 773:3bd0589af992

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refactoring
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 30 Apr 2014 15:08:51 +0200
parents 5197fd35333c
children be87dd517416
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege,
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4 * Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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31
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32
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33 #include "OrthancRestApi.h"
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34
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35 #include "../OrthancInitialization.h"
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36 #include "../../Core/HttpClient.h"
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37
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38 #include <glog/logging.h>
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39
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40 namespace Orthanc
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41 {
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42 // DICOM SCU ----------------------------------------------------------------
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43
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44 static bool MergeQueryAndTemplate(DicomMap& result,
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45 const std::string& postData)
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46 {
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47 Json::Value query;
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48 Json::Reader reader;
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49
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50 if (!reader.parse(postData, query) ||
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51 query.type() != Json::objectValue)
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52 {
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53 return false;
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54 }
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55
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56 Json::Value::Members members = query.getMemberNames();
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57 for (size_t i = 0; i < members.size(); i++)
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58 {
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59 DicomTag t = FromDcmtkBridge::ParseTag(members[i]);
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60 result.SetValue(t, query[members[i]].asString());
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61 }
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62
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63 return true;
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64 }
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65
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66 static void DicomFindPatient(RestApi::PostCall& call)
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67 {
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68 ServerContext& context = OrthancRestApi::GetContext(call);
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69
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70 DicomMap m;
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71 DicomMap::SetupFindPatientTemplate(m);
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72 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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73 {
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74 return;
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75 }
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76
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77 RemoteModalityParameters remote = GetModalityUsingSymbolicName(call.GetUriComponent("id", ""));
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78 ReusableDicomUserConnection::Connection connection(context.GetReusableDicomUserConnection(), remote);
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79
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80 DicomFindAnswers answers;
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81 connection.GetConnection().FindPatient(answers, m);
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82
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83 Json::Value result;
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84 answers.ToJson(result);
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85 call.GetOutput().AnswerJson(result);
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86 }
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87
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88 static void DicomFindStudy(RestApi::PostCall& call)
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89 {
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90 ServerContext& context = OrthancRestApi::GetContext(call);
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91
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92 DicomMap m;
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93 DicomMap::SetupFindStudyTemplate(m);
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94 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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95 {
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96 return;
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97 }
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98
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99 if (m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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100 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2)
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101 {
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102 return;
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103 }
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104
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105 RemoteModalityParameters remote = GetModalityUsingSymbolicName(call.GetUriComponent("id", ""));
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106 ReusableDicomUserConnection::Connection connection(context.GetReusableDicomUserConnection(), remote);
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107
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108 DicomFindAnswers answers;
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109 connection.GetConnection().FindStudy(answers, m);
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110
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111 Json::Value result;
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112 answers.ToJson(result);
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113 call.GetOutput().AnswerJson(result);
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114 }
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115
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116 static void DicomFindSeries(RestApi::PostCall& call)
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117 {
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118 ServerContext& context = OrthancRestApi::GetContext(call);
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119
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120 DicomMap m;
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121 DicomMap::SetupFindSeriesTemplate(m);
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122 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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123 {
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124 return;
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125 }
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126
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127 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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128 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) ||
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129 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2)
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130 {
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131 return;
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132 }
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133
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134 RemoteModalityParameters remote = GetModalityUsingSymbolicName(call.GetUriComponent("id", ""));
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135 ReusableDicomUserConnection::Connection connection(context.GetReusableDicomUserConnection(), remote);
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136
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137 DicomFindAnswers answers;
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138 connection.GetConnection().FindSeries(answers, m);
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139
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140 Json::Value result;
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141 answers.ToJson(result);
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142 call.GetOutput().AnswerJson(result);
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143 }
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144
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145 static void DicomFindInstance(RestApi::PostCall& call)
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146 {
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147 ServerContext& context = OrthancRestApi::GetContext(call);
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148
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149 DicomMap m;
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150 DicomMap::SetupFindInstanceTemplate(m);
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151 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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152 {
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153 return;
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154 }
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155
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156 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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157 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) ||
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158 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2 ||
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159 m.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).AsString().size() <= 2)
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160 {
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161 return;
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162 }
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163
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164 RemoteModalityParameters remote = GetModalityUsingSymbolicName(call.GetUriComponent("id", ""));
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165 ReusableDicomUserConnection::Connection connection(context.GetReusableDicomUserConnection(), remote);
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166
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167 DicomFindAnswers answers;
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168 connection.GetConnection().FindInstance(answers, m);
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169
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170 Json::Value result;
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171 answers.ToJson(result);
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172 call.GetOutput().AnswerJson(result);
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173 }
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174
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175 static void DicomFind(RestApi::PostCall& call)
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176 {
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177 ServerContext& context = OrthancRestApi::GetContext(call);
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178
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179 DicomMap m;
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180 DicomMap::SetupFindPatientTemplate(m);
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181 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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182 {
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183 return;
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184 }
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185
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186 RemoteModalityParameters remote = GetModalityUsingSymbolicName(call.GetUriComponent("id", ""));
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187 ReusableDicomUserConnection::Connection connection(context.GetReusableDicomUserConnection(), remote);
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188
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189 DicomFindAnswers patients;
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190 connection.GetConnection().FindPatient(patients, m);
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191
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192 // Loop over the found patients
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193 Json::Value result = Json::arrayValue;
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194 for (size_t i = 0; i < patients.GetSize(); i++)
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195 {
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196 Json::Value patient(Json::objectValue);
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197 FromDcmtkBridge::ToJson(patient, patients.GetAnswer(i));
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198
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199 DicomMap::SetupFindStudyTemplate(m);
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200 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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201 {
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202 return;
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203 }
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204 m.CopyTagIfExists(patients.GetAnswer(i), DICOM_TAG_PATIENT_ID);
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205
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206 DicomFindAnswers studies;
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207 connection.GetConnection().FindStudy(studies, m);
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208
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209 patient["Studies"] = Json::arrayValue;
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210
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211 // Loop over the found studies
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212 for (size_t j = 0; j < studies.GetSize(); j++)
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213 {
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214 Json::Value study(Json::objectValue);
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215 FromDcmtkBridge::ToJson(study, studies.GetAnswer(j));
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216
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217 DicomMap::SetupFindSeriesTemplate(m);
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218 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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219 {
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220 return;
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221 }
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222 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_PATIENT_ID);
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223 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_STUDY_INSTANCE_UID);
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224
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225 DicomFindAnswers series;
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226 connection.GetConnection().FindSeries(series, m);
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227
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228 // Loop over the found series
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229 study["Series"] = Json::arrayValue;
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230 for (size_t k = 0; k < series.GetSize(); k++)
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231 {
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232 Json::Value series2(Json::objectValue);
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233 FromDcmtkBridge::ToJson(series2, series.GetAnswer(k));
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234 study["Series"].append(series2);
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235 }
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236
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237 patient["Studies"].append(study);
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238 }
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239
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240 result.append(patient);
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241 }
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242
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243 call.GetOutput().AnswerJson(result);
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244 }
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245
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246
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247 static bool GetInstancesToExport(std::list<std::string>& instances,
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248 const std::string& remote,
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249 RestApi::PostCall& call)
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250 {
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251 ServerContext& context = OrthancRestApi::GetContext(call);
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252
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253 std::string stripped = Toolbox::StripSpaces(call.GetPostBody());
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254
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255 Json::Value request;
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256 if (Toolbox::IsSHA1(stripped))
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257 {
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258 // This is for compatibility with Orthanc <= 0.5.1.
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259 request = stripped;
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260 }
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261 else if (!call.ParseJsonRequest(request))
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262 {
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263 // Bad JSON request
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264 return false;
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265 }
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266
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267 if (request.isString())
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268 {
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269 context.GetIndex().LogExportedResource(request.asString(), remote);
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270 context.GetIndex().GetChildInstances(instances, request.asString());
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271 }
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272 else if (request.isArray())
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273 {
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274 for (Json::Value::ArrayIndex i = 0; i < request.size(); i++)
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275 {
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276 if (!request[i].isString())
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277 {
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278 return false;
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279 }
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280
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281 std::string stripped = Toolbox::StripSpaces(request[i].asString());
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282 if (!Toolbox::IsSHA1(stripped))
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283 {
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284 return false;
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285 }
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286
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287 context.GetIndex().LogExportedResource(stripped, remote);
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288
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289 std::list<std::string> tmp;
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290 context.GetIndex().GetChildInstances(tmp, stripped);
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291
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292 for (std::list<std::string>::const_iterator
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293 it = tmp.begin(); it != tmp.end(); ++it)
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294 {
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295 instances.push_back(*it);
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296 }
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297 }
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298 }
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299 else
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300 {
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301 // Neither a string, nor a list of strings. Bad request.
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302 return false;
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303 }
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304
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305 return true;
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306 }
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307
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308
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309 static void DicomStore(RestApi::PostCall& call)
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310 {
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311 ServerContext& context = OrthancRestApi::GetContext(call);
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312
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313 std::string remote = call.GetUriComponent("id", "");
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314
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315 std::list<std::string> instances;
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316 if (!GetInstancesToExport(instances, remote, call))
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317 {
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318 return;
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319 }
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320
773
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321 RemoteModalityParameters p = GetModalityUsingSymbolicName(remote);
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322 ReusableDicomUserConnection::Connection connection(context.GetReusableDicomUserConnection(), p);
751
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323
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324 for (std::list<std::string>::const_iterator
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325 it = instances.begin(); it != instances.end(); ++it)
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326 {
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327 LOG(INFO) << "Sending resource " << *it << " to modality \"" << remote << "\"";
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328
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329 std::string dicom;
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330 context.ReadFile(dicom, *it, FileContentType_Dicom);
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331 connection.GetConnection().Store(dicom);
751
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332 }
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333
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334 call.GetOutput().AnswerBuffer("{}", "application/json");
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335 }
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336
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337
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338 // Orthanc Peers ------------------------------------------------------------
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339
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340 static bool IsExistingPeer(const OrthancRestApi::SetOfStrings& peers,
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341 const std::string& id)
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342 {
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343 return peers.find(id) != peers.end();
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344 }
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345
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346 static void ListPeers(RestApi::GetCall& call)
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347 {
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348 OrthancRestApi::SetOfStrings peers;
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349 GetListOfOrthancPeers(peers);
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350
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351 Json::Value result = Json::arrayValue;
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352 for (OrthancRestApi::SetOfStrings::const_iterator
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353 it = peers.begin(); it != peers.end(); ++it)
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354 {
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diff changeset
355 result.append(*it);
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356 }
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357
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diff changeset
358 call.GetOutput().AnswerJson(result);
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parents:
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359 }
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diff changeset
360
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361 static void ListPeerOperations(RestApi::GetCall& call)
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362 {
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diff changeset
363 OrthancRestApi::SetOfStrings peers;
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diff changeset
364 GetListOfOrthancPeers(peers);
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parents:
diff changeset
365
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366 std::string id = call.GetUriComponent("id", "");
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diff changeset
367 if (IsExistingPeer(peers, id))
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parents:
diff changeset
368 {
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diff changeset
369 Json::Value result = Json::arrayValue;
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diff changeset
370 result.append("store");
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diff changeset
371 call.GetOutput().AnswerJson(result);
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parents:
diff changeset
372 }
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parents:
diff changeset
373 }
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diff changeset
374
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
375 static void PeerStore(RestApi::PostCall& call)
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diff changeset
376 {
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diff changeset
377 ServerContext& context = OrthancRestApi::GetContext(call);
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378
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diff changeset
379 std::string remote = call.GetUriComponent("id", "");
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diff changeset
380
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diff changeset
381 std::list<std::string> instances;
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
382 if (!GetInstancesToExport(instances, remote, call))
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parents:
diff changeset
383 {
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parents:
diff changeset
384 return;
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parents:
diff changeset
385 }
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parents:
diff changeset
386
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diff changeset
387 std::string url, username, password;
5197fd35333c refactoring of OrthancRestApi
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diff changeset
388 GetOrthancPeer(remote, url, username, password);
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diff changeset
389
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diff changeset
390 // Configure the HTTP client
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diff changeset
391 HttpClient client;
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diff changeset
392 if (username.size() != 0 && password.size() != 0)
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parents:
diff changeset
393 {
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diff changeset
394 client.SetCredentials(username.c_str(), password.c_str());
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parents:
diff changeset
395 }
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parents:
diff changeset
396
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diff changeset
397 client.SetUrl(url + "instances");
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
398 client.SetMethod(HttpMethod_Post);
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
399
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
400 // Loop over the instances that are to be sent
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
401 for (std::list<std::string>::const_iterator
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
402 it = instances.begin(); it != instances.end(); ++it)
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
403 {
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
404 LOG(INFO) << "Sending resource " << *it << " to peer \"" << remote << "\"";
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
405
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
406 context.ReadFile(client.AccessPostData(), *it, FileContentType_Dicom);
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
407
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
408 std::string answer;
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
409 if (!client.Apply(answer))
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
410 {
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
411 LOG(ERROR) << "Unable to send resource " << *it << " to peer \"" << remote << "\"";
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
412 return;
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
413 }
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
414 }
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
415
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
416 call.GetOutput().AnswerBuffer("{}", "application/json");
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
417 }
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
418
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
419
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
420 // DICOM bridge -------------------------------------------------------------
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parents:
diff changeset
421
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diff changeset
422 static bool IsExistingModality(const OrthancRestApi::SetOfStrings& modalities,
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
423 const std::string& id)
5197fd35333c refactoring of OrthancRestApi
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parents:
diff changeset
424 {
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425 return modalities.find(id) != modalities.end();
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426 }
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427
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428 static void ListModalities(RestApi::GetCall& call)
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429 {
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430 OrthancRestApi::SetOfStrings modalities;
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431 GetListOfDicomModalities(modalities);
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432
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433 Json::Value result = Json::arrayValue;
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434 for (OrthancRestApi::SetOfStrings::const_iterator
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435 it = modalities.begin(); it != modalities.end(); ++it)
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436 {
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437 result.append(*it);
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438 }
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439
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440 call.GetOutput().AnswerJson(result);
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441 }
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442
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443
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444 static void ListModalityOperations(RestApi::GetCall& call)
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445 {
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446 OrthancRestApi::SetOfStrings modalities;
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447 GetListOfDicomModalities(modalities);
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448
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449 std::string id = call.GetUriComponent("id", "");
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450 if (IsExistingModality(modalities, id))
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451 {
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452 Json::Value result = Json::arrayValue;
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453 result.append("find-patient");
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454 result.append("find-study");
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455 result.append("find-series");
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456 result.append("find-instance");
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457 result.append("find");
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458 result.append("store");
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459 call.GetOutput().AnswerJson(result);
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460 }
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461 }
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462
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463
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464 void OrthancRestApi::RegisterModalities()
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465 {
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466 Register("/modalities", ListModalities);
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467 Register("/modalities/{id}", ListModalityOperations);
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468 Register("/modalities/{id}/find-patient", DicomFindPatient);
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469 Register("/modalities/{id}/find-study", DicomFindStudy);
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470 Register("/modalities/{id}/find-series", DicomFindSeries);
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471 Register("/modalities/{id}/find-instance", DicomFindInstance);
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472 Register("/modalities/{id}/find", DicomFind);
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473 Register("/modalities/{id}/store", DicomStore);
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474
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475 Register("/peers", ListPeers);
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476 Register("/peers/{id}", ListPeerOperations);
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477 Register("/peers/{id}/store", PeerStore);
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478 }
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479 }