orthanc: Core/DicomParsing/FromDcmtkBridge.cpp annotate

annotate Core/DicomParsing/FromDcmtkBridge.cpp @ 3195:880e4161c312

cont

author	Sebastien Jodogne <s.jodogne@gmail.com>
date	Tue, 05 Feb 2019 20:44:26 +0100
parents	47ef29168698
children	7724ed267b5c

rev	line source
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1 /**
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	2 * Orthanc - A Lightweight, RESTful DICOM Store
1900 b1291df2f780 2016 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1876 diff changeset	3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288 6e7e5ed91c2d upgrade to year 2015 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1147 diff changeset	4 * Department, University Hospital of Liege, Belgium
3060 4e43e67f8ecf preparing for 2019 Sebastien Jodogne <s.jodogne@gmail.com> parents: 2954 diff changeset	5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	6 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	7 * This program is free software: you can redistribute it and/or
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	8 * modify it under the terms of the GNU General Public License as
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	9 * published by the Free Software Foundation, either version 3 of the
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	10 * License, or (at your option) any later version.
136 fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	11 *
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	12 * In addition, as a special exception, the copyright holders of this
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	13 * program give permission to link the code of its release with the
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	15 * that use the same license as the "OpenSSL" library), and distribute
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	16 * the linked executables. You must obey the GNU General Public License
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	17 * in all respects for all of the code used other than "OpenSSL". If you
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	18 * modify file(s) with this exception, you may extend this exception to
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	19 * your version of the file(s), but you are not obligated to do so. If
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	20 * you do not wish to do so, delete this exception statement from your
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	21 * version. If you delete this exception statement from all source files
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	22 * in the program, then also delete it here.
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	23 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	24 * This program is distributed in the hope that it will be useful, but
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	25 * WITHOUT ANY WARRANTY; without even the implied warranty of
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	27 * General Public License for more details.
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	28 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	29 * You should have received a copy of the GNU General Public License
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	31 **/
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	32
448 9d830dcc7730 missing copyright information Sebastien Jodogne <s.jodogne@gmail.com> parents: 419 diff changeset	33
2382 7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	34 #include "../PrecompiledHeaders.h"
824 a811bdf8b8eb precompiled headers Sebastien Jodogne <s.jodogne@gmail.com> parents: 799 diff changeset	35
71 aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	36 #ifndef NOMINMAX
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	37 #define NOMINMAX
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	38 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	39
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	40 #if !defined(ORTHANC_SANDBOXED)
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	41 # error The macro ORTHANC_SANDBOXED must be defined
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	42 #endif
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	43
3117 c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	44 #if !defined(DCMTK_VERSION_NUMBER)
c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	45 # error The macro DCMTK_VERSION_NUMBER must be defined
c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	46 #endif
c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	47
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	48 #include "FromDcmtkBridge.h"
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	49 #include "ToDcmtkBridge.h"
2382 7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	50 #include "../Logging.h"
7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	51 #include "../Toolbox.h"
7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	52 #include "../OrthancException.h"
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	53
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	54 #if ORTHANC_SANDBOXED == 0
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	55 # include "../TemporaryFile.h"
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	56 #endif
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	57
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	58 #include <list>
71 aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	59 #include <limits>
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	60
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	61 #include <boost/lexical_cast.hpp>
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	62 #include <boost/filesystem.hpp>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	63 #include <boost/algorithm/string/predicate.hpp>
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	64 #include <boost/algorithm/string/join.hpp>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	65
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	66 #include <dcmtk/dcmdata/dcdeftag.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	67 #include <dcmtk/dcmdata/dcdicent.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	68 #include <dcmtk/dcmdata/dcdict.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	69 #include <dcmtk/dcmdata/dcfilefo.h>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	70 #include <dcmtk/dcmdata/dcostrmb.h>
b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	71 #include <dcmtk/dcmdata/dcpixel.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	72 #include <dcmtk/dcmdata/dcuid.h>
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	73 #include <dcmtk/dcmdata/dcistrmb.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	74
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	75 #include <dcmtk/dcmdata/dcvrae.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	76 #include <dcmtk/dcmdata/dcvras.h>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	77 #include <dcmtk/dcmdata/dcvrat.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	78 #include <dcmtk/dcmdata/dcvrcs.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	79 #include <dcmtk/dcmdata/dcvrda.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	80 #include <dcmtk/dcmdata/dcvrds.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	81 #include <dcmtk/dcmdata/dcvrdt.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	82 #include <dcmtk/dcmdata/dcvrfd.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	83 #include <dcmtk/dcmdata/dcvrfl.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	84 #include <dcmtk/dcmdata/dcvris.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	85 #include <dcmtk/dcmdata/dcvrlo.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	86 #include <dcmtk/dcmdata/dcvrlt.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	87 #include <dcmtk/dcmdata/dcvrpn.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	88 #include <dcmtk/dcmdata/dcvrsh.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	89 #include <dcmtk/dcmdata/dcvrsl.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	90 #include <dcmtk/dcmdata/dcvrss.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	91 #include <dcmtk/dcmdata/dcvrst.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	92 #include <dcmtk/dcmdata/dcvrtm.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	93 #include <dcmtk/dcmdata/dcvrui.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	94 #include <dcmtk/dcmdata/dcvrul.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	95 #include <dcmtk/dcmdata/dcvrus.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	96 #include <dcmtk/dcmdata/dcvrut.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	97
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	98 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	99 # include <EmbeddedResources.h>
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	100 #endif
682 efc4928be6fb Recover pixel data for more transfer syntaxes (notably JPEG) Sebastien Jodogne <s.jodogne@gmail.com> parents: 677 diff changeset	101
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	102 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	103 # include <dcmtk/dcmjpeg/djdecode.h>
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	104 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	105
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	106 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	107 # include <dcmtk/dcmjpls/djdecode.h>
1930 1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	108 #endif
1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	109
1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	110
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	111 namespace Orthanc
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	112 {
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	113 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	114 static void LoadEmbeddedDictionary(DcmDataDictionary& dictionary,
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	115 EmbeddedResources::FileResourceId resource)
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	116 {
2017 08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	117 std::string content;
08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	118 EmbeddedResources::GetFileResource(content, resource);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	119
2513 97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	120 #if ORTHANC_SANDBOXED == 0
2143 fd5875662670 creation of namespace SystemToolbox Sebastien Jodogne <s.jodogne@gmail.com> parents: 2142 diff changeset	121 TemporaryFile tmp;
2017 08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	122 tmp.Write(content);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	123
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	124 if (!dictionary.loadDictionary(tmp.GetPath().c_str()))
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	125 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	126 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	127 "Cannot read embedded dictionary. Under Windows, make sure that "
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	128 "your TEMP directory does not contain special characters.");
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	129 }
2513 97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	130 #else
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	131 if (!dictionary.loadFromMemory(content))
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	132 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	133 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	134 "Cannot read embedded dictionary. Under Windows, make sure that "
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	135 "your TEMP directory does not contain special characters.");
2513 97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	136 }
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	137 #endif
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	138 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	139
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	140 #else
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	141 static void LoadExternalDictionary(DcmDataDictionary& dictionary,
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	142 const std::string& directory,
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	143 const std::string& filename)
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	144 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	145 boost::filesystem::path p = directory;
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	146 p = p / filename;
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	147
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	148 LOG(WARNING) << "Loading the external DICOM dictionary " << p;
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	149
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	150 if (!dictionary.loadDictionary(p.string().c_str()))
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	151 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	152 throw OrthancException(ErrorCode_InternalError);
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	153 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	154 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	155 #endif
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	156
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	157
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	158 namespace
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	159 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	160 class DictionaryLocker
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	161 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	162 private:
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	163 DcmDataDictionary& dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	164
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	165 public:
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	166 DictionaryLocker() : dictionary_(dcmDataDict.wrlock())
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	167 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	168 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	169
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	170 ~DictionaryLocker()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	171 {
3117 c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	172 #if DCMTK_VERSION_NUMBER >= 364
c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	173 dcmDataDict.wrunlock();
c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	174 #else
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	175 dcmDataDict.unlock();
3117 c8b75e207a82 working on dcmtk 3.6.4 compatibility jodogne parents: 3060 diff changeset	176 #endif
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	177 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	178
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	179 DcmDataDictionary& operator*()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	180 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	181 return dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	182 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	183
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	184 DcmDataDictionary* operator->()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	185 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	186 return &dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	187 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	188 };
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	189
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	190
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	191 #define DCMTK_TO_CTYPE_CONVERTER(converter, cType, dcmtkType, getter) \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	192 \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	193 struct converter \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	194 { \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	195 typedef cType CType; \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	196 \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	197 static bool Apply(CType& result, \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	198 DcmElement& element, \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	199 size_t i) \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	200 { \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	201 return dynamic_cast<dcmtkType&>(element).getter(result, i).good(); \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	202 } \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	203 };
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	204
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	205 DCMTK_TO_CTYPE_CONVERTER(DcmtkToSint32Converter, Sint32, DcmSignedLong, getSint32)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	206 DCMTK_TO_CTYPE_CONVERTER(DcmtkToSint16Converter, Sint16, DcmSignedShort, getSint16)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	207 DCMTK_TO_CTYPE_CONVERTER(DcmtkToUint32Converter, Uint32, DcmUnsignedLong, getUint32)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	208 DCMTK_TO_CTYPE_CONVERTER(DcmtkToUint16Converter, Uint16, DcmUnsignedShort, getUint16)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	209 DCMTK_TO_CTYPE_CONVERTER(DcmtkToFloat32Converter, Float32, DcmFloatingPointSingle, getFloat32)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	210 DCMTK_TO_CTYPE_CONVERTER(DcmtkToFloat64Converter, Float64, DcmFloatingPointDouble, getFloat64)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	211
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	212
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	213 template <typename F>
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	214 static DicomValue* ApplyDcmtkToCTypeConverter(DcmElement& element)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	215 {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	216 F f;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	217 typename F::CType value;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	218
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	219 if (element.getLength() > sizeof(typename F::CType)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	220 && (element.getLength() % sizeof(typename F::CType)) == 0)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	221 {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	222 size_t count = element.getLength() / sizeof(typename F::CType);
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	223 std::vector<std::string> strings;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	224 for (size_t i = 0; i < count; i++) {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	225 if (f.Apply(value, element, i)) {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	226 strings.push_back(boost::lexical_cast<std::string>(value));
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	227 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	228 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	229 return new DicomValue(boost::algorithm::join(strings, "\\"), false);
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	230 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	231 else if (f.Apply(value, element, 0)) {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	232 return new DicomValue(boost::lexical_cast<std::string>(value), false);
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	233 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	234 else {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	235 return new DicomValue;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	236 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	237 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	238
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	239 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	240
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	241
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	242 void FromDcmtkBridge::InitializeDictionary(bool loadPrivateDictionary)
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	243 {
2296 17e8e8e1ff3d log dcmtk version Sebastien Jodogne <s.jodogne@gmail.com> parents: 2287 diff changeset	244 LOG(INFO) << "Using DCTMK version: " << DCMTK_VERSION_NUMBER;
17e8e8e1ff3d log dcmtk version Sebastien Jodogne <s.jodogne@gmail.com> parents: 2287 diff changeset	245
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	246 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	247 DictionaryLocker locker;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	248
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	249 locker->clear();
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	250
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	251 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
2528 832217e4e872 old warnings turned into info Sebastien Jodogne <s.jodogne@gmail.com> parents: 2522 diff changeset	252 LOG(INFO) << "Loading the embedded dictionaries";
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	253 /**
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	254 * Do not load DICONDE dictionary, it breaks the other tags. The
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	255 * command "strace storescu 2>&1 \|grep dic" shows that DICONDE
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	256 * dictionary is not loaded by storescu.
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	257 **/
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	258 //LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_DICONDE);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	259
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	260 LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_DICOM);
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	261
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	262 if (loadPrivateDictionary)
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	263 {
2152 cbebc5d072b0 Use of DCMTK 3.6.1 dictionary of private tags in standalone builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 2151 diff changeset	264 LOG(INFO) << "Loading the embedded dictionary of private tags";
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	265 LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_PRIVATE);
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	266 }
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	267 else
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	268 {
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	269 LOG(INFO) << "The dictionary of private tags has not been loaded";
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	270 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	271
2364 ae50eccd41b7 compilation succeeds on OpenBSD jodogne parents: 2296 diff changeset	272 #elif defined(__linux__) \|\| defined(__FreeBSD_kernel__) \|\| defined(__FreeBSD__) \|\| defined(__OpenBSD__)
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	273 std::string path = DCMTK_DICTIONARY_DIR;
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	274
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	275 const char* env = std::getenv(DCM_DICT_ENVIRONMENT_VARIABLE);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	276 if (env != NULL)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	277 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	278 path = std::string(env);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	279 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	280
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	281 LoadExternalDictionary(*locker, path, "dicom.dic");
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	282
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	283 if (loadPrivateDictionary)
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	284 {
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	285 LoadExternalDictionary(*locker, path, "private.dic");
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	286 }
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	287 else
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	288 {
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	289 LOG(INFO) << "The dictionary of private tags has not been loaded";
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	290 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	291
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	292 #else
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	293 #error Support your platform here
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	294 #endif
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	295 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	296
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	297 /* make sure data dictionary is loaded */
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	298 if (!dcmDataDict.isDictionaryLoaded())
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	299 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	300 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	301 "No DICOM dictionary loaded, check environment variable: " +
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	302 std::string(DCM_DICT_ENVIRONMENT_VARIABLE));
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	303 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	304
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	305 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	306 // Test the dictionary with a simple DICOM tag
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	307 DcmTag key(0x0010, 0x1030); // This is PatientWeight
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	308 if (key.getEVR() != EVR_DS)
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	309 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	310 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	311 "The DICOM dictionary has not been correctly read");
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	312 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	313 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	314 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	315
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	316
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	317 void FromDcmtkBridge::RegisterDictionaryTag(const DicomTag& tag,
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	318 ValueRepresentation vr,
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	319 const std::string& name,
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	320 unsigned int minMultiplicity,
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	321 unsigned int maxMultiplicity,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	322 const std::string& privateCreator)
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	323 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	324 if (minMultiplicity < 1)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	325 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	326 throw OrthancException(ErrorCode_ParameterOutOfRange);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	327 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	328
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	329 bool arbitrary = false;
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	330 if (maxMultiplicity == 0)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	331 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	332 maxMultiplicity = DcmVariableVM;
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	333 arbitrary = true;
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	334 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	335 else if (maxMultiplicity < minMultiplicity)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	336 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	337 throw OrthancException(ErrorCode_ParameterOutOfRange);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	338 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	339
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	340 DcmEVR evr = ToDcmtkBridge::Convert(vr);
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	341
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	342 LOG(INFO) << "Registering tag in dictionary: " << tag << " " << (DcmVR(evr).getValidVRName()) << " "
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	343 << name << " (multiplicity: " << minMultiplicity << "-"
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	344 << (arbitrary ? "n" : boost::lexical_cast<std::string>(maxMultiplicity)) << ")";
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	345
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	346 std::auto_ptr<DcmDictEntry> entry;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	347 if (privateCreator.empty())
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	348 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	349 if (tag.GetGroup() % 2 == 1)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	350 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	351 char buf[128];
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	352 sprintf(buf, "Warning: You are registering a private tag (%04x,%04x), "
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	353 "but no private creator was associated with it",
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	354 tag.GetGroup(), tag.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	355 LOG(WARNING) << buf;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	356 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	357
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	358 entry.reset(new DcmDictEntry(tag.GetGroup(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	359 tag.GetElement(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	360 evr, name.c_str(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	361 static_cast<int>(minMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	362 static_cast<int>(maxMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	363 NULL /* version */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	364 OFTrue /* doCopyString */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	365 NULL /* private creator */));
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	366 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	367 else
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	368 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	369 // "Private Data Elements have an odd Group Number that is not
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	370 // (0001,eeee), (0003,eeee), (0005,eeee), (0007,eeee), or
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	371 // (FFFF,eeee)."
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	372 if (tag.GetGroup() % 2 == 0 /* even */ \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	373 tag.GetGroup() == 0x0001 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	374 tag.GetGroup() == 0x0003 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	375 tag.GetGroup() == 0x0005 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	376 tag.GetGroup() == 0x0007 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	377 tag.GetGroup() == 0xffff)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	378 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	379 char buf[128];
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	380 sprintf(buf, "Trying to register private tag (%04x,%04x), but it must have an odd group >= 0x0009",
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	381 tag.GetGroup(), tag.GetElement());
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	382 throw OrthancException(ErrorCode_ParameterOutOfRange, std::string(buf));
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	383 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	384
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	385 entry.reset(new DcmDictEntry(tag.GetGroup(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	386 tag.GetElement(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	387 evr, name.c_str(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	388 static_cast<int>(minMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	389 static_cast<int>(maxMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	390 "private" /* version */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	391 OFTrue /* doCopyString */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	392 privateCreator.c_str()));
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	393 }
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	394
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	395 entry->setGroupRangeRestriction(DcmDictRange_Unspecified);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	396 entry->setElementRangeRestriction(DcmDictRange_Unspecified);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	397
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	398 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	399 DictionaryLocker locker;
2116 2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	400
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	401 if (locker->findEntry(name.c_str()))
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	402 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	403 throw OrthancException(ErrorCode_AlreadyExistingTag,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	404 "Cannot register two tags with the same symbolic name \"" + name + "\"");
2116 2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	405 }
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	406
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	407 locker->addEntry(entry.release());
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	408 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	409 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	410
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	411
1936 dba0db0a94b4 generalization Sebastien Jodogne <s.jodogne@gmail.com> parents: 1935 diff changeset	412 Encoding FromDcmtkBridge::DetectEncoding(DcmItem& dataset,
1928 84c7eaeb5244 Configuration::GetDefaultEncoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 1927 diff changeset	413 Encoding defaultEncoding)
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	414 {
1928 84c7eaeb5244 Configuration::GetDefaultEncoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 1927 diff changeset	415 Encoding encoding = defaultEncoding;
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	416
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	417 OFString tmp;
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	418 if (dataset.findAndGetOFString(DCM_SpecificCharacterSet, tmp).good())
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	419 {
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	420 std::string characterSet = Toolbox::StripSpaces(std::string(tmp.c_str()));
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	421
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	422 if (characterSet.empty())
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	423 {
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	424 // Empty specific character set tag: Use the default encoding
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	425 }
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	426 else if (GetDicomEncoding(encoding, characterSet.c_str()))
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	427 {
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	428 // The specific character set is supported by the Orthanc core
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	429 }
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	430 else
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	431 {
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	432 LOG(WARNING) << "Value of Specific Character Set (0008,0005) is not supported: " << characterSet
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	433 << ", fallback to ASCII (remove all special characters)";
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	434 encoding = Encoding_Ascii;
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	435 }
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	436 }
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	437 else
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	438 {
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	439 // No specific character set tag: Use the default encoding
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	440 }
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	441
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	442 return encoding;
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	443 }
2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	444
2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	445
2125 b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	446 void FromDcmtkBridge::ExtractDicomSummary(DicomMap& target,
b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	447 DcmItem& dataset,
b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	448 unsigned int maxStringLength,
b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	449 Encoding defaultEncoding)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	450 {
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	451 std::set<DicomTag> ignoreTagLength;
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	452
1928 84c7eaeb5244 Configuration::GetDefaultEncoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 1927 diff changeset	453 Encoding encoding = DetectEncoding(dataset, defaultEncoding);
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	454
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	455 target.Clear();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	456 for (unsigned long i = 0; i < dataset.card(); i++)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	457 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	458 DcmElement* element = dataset.getElement(i);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	459 if (element && element->isLeaf())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	460 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	461 target.SetValue(element->getTag().getGTag(),
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	462 element->getTag().getETag(),
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	463 ConvertLeafElement(*element, DicomToJsonFlags_Default,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	464 maxStringLength, encoding, ignoreTagLength));
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	465 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	466 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	467 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	468
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	469
991 2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	470 DicomTag FromDcmtkBridge::Convert(const DcmTag& tag)
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	471 {
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	472 return DicomTag(tag.getGTag(), tag.getETag());
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	473 }
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	474
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	475
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	476 DicomTag FromDcmtkBridge::GetTag(const DcmElement& element)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	477 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	478 return DicomTag(element.getGTag(), element.getETag());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	479 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	480
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	481
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	482 DicomValue* FromDcmtkBridge::ConvertLeafElement(DcmElement& element,
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	483 DicomToJsonFlags flags,
1929 cda5b0ab4ce5 ORTHANC_MAXIMUM_TAG_LENGTH made explicit Sebastien Jodogne <s.jodogne@gmail.com> parents: 1928 diff changeset	484 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	485 Encoding encoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	486 const std::set<DicomTag>& ignoreTagLength)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	487 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	488 if (!element.isLeaf())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	489 {
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	490 // This function is only applicable to leaf elements
bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	491 throw OrthancException(ErrorCode_BadParameterType);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	492 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	493
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	494 char *c = NULL;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	495 if (element.isaString() &&
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	496 element.getString(c).good())
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	497 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	498 if (c == NULL) // This case corresponds to the empty string
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	499 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	500 return new DicomValue("", false);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	501 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	502 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	503 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	504 std::string s(c);
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	505 std::string utf8 = Toolbox::ConvertToUtf8(s, encoding);
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	506
1929 cda5b0ab4ce5 ORTHANC_MAXIMUM_TAG_LENGTH made explicit Sebastien Jodogne <s.jodogne@gmail.com> parents: 1928 diff changeset	507 if (maxStringLength != 0 &&
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	508 utf8.size() > maxStringLength &&
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	509 ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	510 {
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	511 return new DicomValue; // Too long, create a NULL value
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	512 }
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	513 else
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	514 {
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	515 return new DicomValue(utf8, false);
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	516 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	517 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	518 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	519
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	520
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	521 if (element.getVR() == EVR_UN)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	522 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	523 // Unknown value representation: Lookup in the dictionary. This
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	524 // is notably the case for private tags registered with the
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	525 // "Dictionary" configuration option.
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	526 DictionaryLocker locker;
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	527
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	528 const DcmDictEntry* entry = locker->findEntry(element.getTag().getXTag(),
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	529 element.getTag().getPrivateCreator());
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	530 if (entry != NULL &&
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	531 entry->getVR().isaString())
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	532 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	533 Uint8* data = NULL;
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	534
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	535 // At (*), we do not try and convert to UTF-8, as nothing says
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	536 // the encoding of the private tag is the same as that of the
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	537 // remaining of the DICOM dataset. Only go for ASCII strings.
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	538
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	539 if (element.getUint8Array(data) == EC_Normal &&
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	540 Toolbox::IsAsciiString(data, element.getLength())) // (*)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	541 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	542 if (data == NULL)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	543 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	544 return new DicomValue("", false); // Empty string
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	545 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	546 else if (maxStringLength != 0 &&
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	547 element.getLength() > maxStringLength &&
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	548 ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	549 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	550 return new DicomValue; // Too long, create a NULL value
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	551 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	552 else
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	553 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	554 std::string s(reinterpret_cast<const char*>(data), element.getLength());
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	555 return new DicomValue(s, false);
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	556 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	557 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	558 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	559 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	560
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	561
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	562 try
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	563 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	564 // http://support.dcmtk.org/docs/dcvr_8h-source.html
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	565 switch (element.getVR())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	566 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	567
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	568 /**
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	569 * Deal with binary data (including PixelData).
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	570 **/
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	571
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	572 case EVR_OB: // other byte
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	573 case EVR_OF: // other float
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	574 case EVR_OW: // other word
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	575 case EVR_UN: // unknown value representation
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	576 case EVR_ox: // OB or OW depending on context
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	577 case EVR_DS: // decimal string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	578 case EVR_IS: // integer string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	579 case EVR_AS: // age string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	580 case EVR_DA: // date string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	581 case EVR_DT: // date time string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	582 case EVR_TM: // time string
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	583 case EVR_AE: // application entity title
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	584 case EVR_CS: // code string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	585 case EVR_SH: // short string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	586 case EVR_LO: // long string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	587 case EVR_ST: // short text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	588 case EVR_LT: // long text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	589 case EVR_UT: // unlimited text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	590 case EVR_PN: // person name
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	591 case EVR_UI: // unique identifier
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	592 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	593 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	594 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	595 if (!(flags & DicomToJsonFlags_ConvertBinaryToNull))
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	596 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	597 Uint8* data = NULL;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	598 if (element.getUint8Array(data) == EC_Normal)
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	599 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	600 return new DicomValue(reinterpret_cast<const char*>(data), element.getLength(), true);
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	601 }
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	602 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	603
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	604 return new DicomValue;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	605 }
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	606
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	607 /**
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	608 * Numeric types
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	609 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	610
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	611 case EVR_SL: // signed long
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	612 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	613 return ApplyDcmtkToCTypeConverter<DcmtkToSint32Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	614 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	615
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	616 case EVR_SS: // signed short
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	617 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	618 return ApplyDcmtkToCTypeConverter<DcmtkToSint16Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	619 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	620
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	621 case EVR_UL: // unsigned long
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	622 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	623 return ApplyDcmtkToCTypeConverter<DcmtkToUint32Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	624 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	625
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	626 case EVR_US: // unsigned short
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	627 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	628 return ApplyDcmtkToCTypeConverter<DcmtkToUint16Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	629 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	630
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	631 case EVR_FL: // float single-precision
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	632 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	633 return ApplyDcmtkToCTypeConverter<DcmtkToFloat32Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	634 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	635
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	636 case EVR_FD: // float double-precision
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	637 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	638 return ApplyDcmtkToCTypeConverter<DcmtkToFloat64Converter>(element);
1131 ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	639 }
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	640
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	641
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	642 /**
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	643 * Attribute tag.
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	644 **/
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	645
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	646 case EVR_AT:
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	647 {
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	648 DcmTagKey tag;
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	649 if (dynamic_cast<DcmAttributeTag&>(element).getTagVal(tag, 0).good())
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	650 {
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	651 DicomTag t(tag.getGroup(), tag.getElement());
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	652 return new DicomValue(t.Format(), false);
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	653 }
1131 ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	654 else
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	655 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	656 return new DicomValue;
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	657 }
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	658 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	659
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	660
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	661 /**
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	662 * Sequence types, should never occur at this point because of
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	663 * "element.isLeaf()".
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	664 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	665
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	666 case EVR_SQ: // sequence of items
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	667 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	668
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	669
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	670 /**
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	671 * Internal to DCMTK.
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	672 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	673
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	674 case EVR_xs: // SS or US depending on context
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	675 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	676 case EVR_na: // na="not applicable", for data which has no VR
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	677 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	678 case EVR_item: // used internally for items
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	679 case EVR_metainfo: // used internally for meta info datasets
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	680 case EVR_dataset: // used internally for datasets
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	681 case EVR_fileFormat: // used internally for DICOM files
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	682 case EVR_dicomDir: // used internally for DICOMDIR objects
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	683 case EVR_dirRecord: // used internally for DICOMDIR records
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	684 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	685 case EVR_pixelItem: // used internally for pixel items in a compressed image
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	686 case EVR_PixelData: // used internally for uncompressed pixeld data
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	687 case EVR_OverlayData: // used internally for overlay data
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	688 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	689
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	690
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	691 /**
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	692 * Default case.
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	693 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	694
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	695 default:
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	696 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	697 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	698 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	699 catch (boost::bad_lexical_cast&)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	700 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	701 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	702 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	703 catch (std::bad_cast&)
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	704 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	705 return new DicomValue;
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	706 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	707 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	708
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	709
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	710 static Json::Value& PrepareNode(Json::Value& parent,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	711 DcmElement& element,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	712 DicomToJsonFormat format)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	713 {
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	714 assert(parent.type() == Json::objectValue);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	715
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	716 DicomTag tag(FromDcmtkBridge::GetTag(element));
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	717 const std::string formattedTag = tag.Format();
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	718
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	719 if (format == DicomToJsonFormat_Short)
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	720 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	721 parent[formattedTag] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	722 return parent[formattedTag];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	723 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	724
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	725 // This code gives access to the name of the private tags
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	726 std::string tagName = FromDcmtkBridge::GetTagName(element);
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	727
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	728 switch (format)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	729 {
1860 c7d70f659190 DicomToJsonFormat_Simple -> DicomToJsonFormat_Human Sebastien Jodogne <s.jodogne@gmail.com> parents: 1854 diff changeset	730 case DicomToJsonFormat_Human:
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	731 parent[tagName] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	732 return parent[tagName];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	733
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	734 case DicomToJsonFormat_Full:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	735 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	736 parent[formattedTag] = Json::objectValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	737 Json::Value& node = parent[formattedTag];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	738
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	739 if (element.isLeaf())
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	740 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	741 node["Name"] = tagName;
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	742
2076 ec2ad6ac741e fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2074 diff changeset	743 if (element.getTag().getPrivateCreator() != NULL)
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	744 {
2076 ec2ad6ac741e fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2074 diff changeset	745 node["PrivateCreator"] = element.getTag().getPrivateCreator();
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	746 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	747
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	748 return node;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	749 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	750 else
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	751 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	752 node["Name"] = tagName;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	753 node["Type"] = "Sequence";
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	754 node["Value"] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	755 return node["Value"];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	756 }
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	757 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	758
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	759 default:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	760 throw OrthancException(ErrorCode_ParameterOutOfRange);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	761 }
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	762 }
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	763
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	764
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	765 static void LeafValueToJson(Json::Value& target,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	766 const DicomValue& value,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	767 DicomToJsonFormat format,
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	768 DicomToJsonFlags flags,
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	769 unsigned int maxStringLength)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	770 {
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	771 Json::Value* targetValue = NULL;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	772 Json::Value* targetType = NULL;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	773
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	774 switch (format)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	775 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	776 case DicomToJsonFormat_Short:
1860 c7d70f659190 DicomToJsonFormat_Simple -> DicomToJsonFormat_Human Sebastien Jodogne <s.jodogne@gmail.com> parents: 1854 diff changeset	777 case DicomToJsonFormat_Human:
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	778 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	779 assert(target.type() == Json::nullValue);
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	780 targetValue = &target;
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	781 break;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	782 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	783
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	784 case DicomToJsonFormat_Full:
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	785 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	786 assert(target.type() == Json::objectValue);
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	787 target["Value"] = Json::nullValue;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	788 target["Type"] = Json::nullValue;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	789 targetType = &target["Type"];
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	790 targetValue = &target["Value"];
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	791 break;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	792 }
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	793
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	794 default:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	795 throw OrthancException(ErrorCode_ParameterOutOfRange);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	796 }
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	797
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	798 assert(targetValue != NULL);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	799 assert(targetValue->type() == Json::nullValue);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	800 assert(targetType == NULL \|\| targetType->type() == Json::nullValue);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	801
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	802 if (value.IsNull())
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	803 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	804 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	805 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	806 *targetType = "Null";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	807 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	808 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	809 else if (value.IsBinary())
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	810 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	811 if (flags & DicomToJsonFlags_ConvertBinaryToAscii)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	812 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	813 *targetValue = Toolbox::ConvertToAscii(value.GetContent());
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	814 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	815 else
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	816 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	817 std::string s;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	818 value.FormatDataUriScheme(s);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	819 *targetValue = s;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	820 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	821
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	822 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	823 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	824 *targetType = "Binary";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	825 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	826 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	827 else if (maxStringLength == 0 \|\|
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	828 value.GetContent().size() <= maxStringLength)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	829 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	830 *targetValue = value.GetContent();
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	831
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	832 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	833 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	834 *targetType = "String";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	835 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	836 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	837 else
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	838 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	839 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	840 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	841 *targetType = "TooLong";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	842 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	843 }
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	844 }
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	845
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	846
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	847 void FromDcmtkBridge::ElementToJson(Json::Value& parent,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	848 DcmElement& element,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	849 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	850 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	851 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	852 Encoding encoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	853 const std::set<DicomTag>& ignoreTagLength)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	854 {
1691 e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	855 if (parent.type() == Json::nullValue)
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	856 {
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	857 parent = Json::objectValue;
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	858 }
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	859
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	860 assert(parent.type() == Json::objectValue);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	861 Json::Value& target = PrepareNode(parent, element, format);
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	862
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	863 if (element.isLeaf())
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	864 {
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	865 // The "0" below lets "LeafValueToJson()" take care of "TooLong" values
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	866 std::auto_ptr<DicomValue> v(FromDcmtkBridge::ConvertLeafElement
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	867 (element, flags, 0, encoding, ignoreTagLength));
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	868
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	869 if (ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	870 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	871 LeafValueToJson(target, *v, format, flags, maxStringLength);
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	872 }
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	873 else
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	874 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	875 LeafValueToJson(target, *v, format, flags, 0);
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	876 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	877 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	878 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	879 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	880 assert(target.type() == Json::nullValue);
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	881 target = Json::arrayValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	882
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	883 // "All subclasses of DcmElement except for DcmSequenceOfItems
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	884 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	885 // etc. are not." The following dynamic_cast is thus OK.
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	886 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	887
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	888 for (unsigned long i = 0; i < sequence.card(); i++)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	889 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	890 DcmItem* child = sequence.getItem(i);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	891 Json::Value& v = target.append(Json::objectValue);
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	892 DatasetToJson(v, *child, format, flags, maxStringLength, encoding, ignoreTagLength);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	893 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	894 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	895 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	896
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	897
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	898 void FromDcmtkBridge::DatasetToJson(Json::Value& parent,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	899 DcmItem& item,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	900 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	901 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	902 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	903 Encoding encoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	904 const std::set<DicomTag>& ignoreTagLength)
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	905 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	906 assert(parent.type() == Json::objectValue);
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	907
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	908 for (unsigned long i = 0; i < item.card(); i++)
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	909 {
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	910 DcmElement* element = item.getElement(i);
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	911 if (element == NULL)
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	912 {
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	913 throw OrthancException(ErrorCode_InternalError);
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	914 }
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	915
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	916 DicomTag tag(FromDcmtkBridge::Convert(element->getTag()));
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	917
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	918 /element->getTag().isPrivate()/
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	919 if (tag.IsPrivate() &&
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	920 !(flags & DicomToJsonFlags_IncludePrivateTags))
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	921 {
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	922 continue;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	923 }
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	924
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	925 if (!(flags & DicomToJsonFlags_IncludeUnknownTags))
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	926 {
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	927 DictionaryLocker locker;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	928 if (locker->findEntry(element->getTag(), NULL) == NULL)
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	929 {
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	930 continue;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	931 }
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	932 }
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	933
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	934 DcmEVR evr = element->getTag().getEVR();
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	935 if (evr == EVR_OB \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	936 evr == EVR_OF \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	937 evr == EVR_OW \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	938 evr == EVR_UN \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	939 evr == EVR_ox)
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	940 {
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	941 // This is a binary tag
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	942 if ((tag == DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludePixelData)) \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	943 (tag != DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludeBinary)))
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	944 {
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	945 continue;
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	946 }
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	947 }
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	948
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	949 FromDcmtkBridge::ElementToJson(parent, *element, format, flags,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	950 maxStringLength, encoding, ignoreTagLength);
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	951 }
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	952 }
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	953
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	954
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	955 void FromDcmtkBridge::ExtractDicomAsJson(Json::Value& target,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	956 DcmDataset& dataset,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	957 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	958 DicomToJsonFlags flags,
2131 bb199bccdc45 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 2129 diff changeset	959 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	960 Encoding defaultEncoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	961 const std::set<DicomTag>& ignoreTagLength)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	962 {
2131 bb199bccdc45 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 2129 diff changeset	963 Encoding encoding = DetectEncoding(dataset, defaultEncoding);
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	964
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	965 target = Json::objectValue;
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	966 DatasetToJson(target, dataset, format, flags, maxStringLength, encoding, ignoreTagLength);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	967 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	968
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	969
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	970 void FromDcmtkBridge::ExtractHeaderAsJson(Json::Value& target,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	971 DcmMetaInfo& dataset,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	972 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	973 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	974 unsigned int maxStringLength)
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	975 {
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	976 std::set<DicomTag> ignoreTagLength;
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	977 target = Json::objectValue;
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	978 DatasetToJson(target, dataset, format, flags, maxStringLength, Encoding_Ascii, ignoreTagLength);
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	979 }
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	980
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	981
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	982
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	983 static std::string GetTagNameInternal(DcmTag& tag)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	984 {
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	985 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	986 // Some patches for important tags because of different DICOM
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	987 // dictionaries between DCMTK versions
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	988 DicomTag tmp(tag.getGroup(), tag.getElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	989 std::string n = tmp.GetMainTagsName();
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	990 if (n.size() != 0)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	991 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	992 return n;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	993 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	994 // End of patches
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	995 }
106 332fec038d52 patch for dcmtk dictionaries jodogne parents: 80 diff changeset	996
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	997 #if 0
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	998 // This version explicitly calls the dictionary
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	999 const DcmDataDictionary& dict = dcmDataDict.rdlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1000 const DcmDictEntry* entry = dict.findEntry(tag, NULL);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1001
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1002 std::string s(DcmTag_ERROR_TagName);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1003 if (entry != NULL)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1004 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1005 s = std::string(entry->getTagName());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1006 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1007
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1008 dcmDataDict.unlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1009 return s;
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1010 #else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1011 const char* name = tag.getTagName();
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1012 if (name == NULL)
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1013 {
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1014 return DcmTag_ERROR_TagName;
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1015 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1016 else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1017 {
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1018 return std::string(name);
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1019 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1020 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1021 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1022
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1023
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1024 std::string FromDcmtkBridge::GetTagName(const DicomTag& t,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1025 const std::string& privateCreator)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1026 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1027 DcmTag tag(t.GetGroup(), t.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1028
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1029 if (!privateCreator.empty())
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1030 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1031 tag.setPrivateCreator(privateCreator.c_str());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1032 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1033
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1034 return GetTagNameInternal(tag);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1035 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1036
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1037
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1038 std::string FromDcmtkBridge::GetTagName(const DcmElement& element)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1039 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1040 // Copy the tag to ensure const-correctness of DcmElement. Note
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1041 // that the private creator information is also copied.
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1042 DcmTag tag(element.getTag());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1043
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1044 return GetTagNameInternal(tag);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1045 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1046
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1047
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1048
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1049 DicomTag FromDcmtkBridge::ParseTag(const char* name)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1050 {
2662 47d812308d63 serialization of DicomModification Sebastien Jodogne <s.jodogne@gmail.com> parents: 2554 diff changeset	1051 DicomTag parsed(0, 0);
47d812308d63 serialization of DicomModification Sebastien Jodogne <s.jodogne@gmail.com> parents: 2554 diff changeset	1052 if (DicomTag::ParseHexadecimal(parsed, name))
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1053 {
2662 47d812308d63 serialization of DicomModification Sebastien Jodogne <s.jodogne@gmail.com> parents: 2554 diff changeset	1054 return parsed;
1861 a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1055 }
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1056
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1057 #if 0
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1058 const DcmDataDictionary& dict = dcmDataDict.rdlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1059 const DcmDictEntry* entry = dict.findEntry(name);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1060
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1061 if (entry == NULL)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1062 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1063 dcmDataDict.unlock();
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	1064 throw OrthancException(ErrorCode_UnknownDicomTag);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1065 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1066 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1067 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1068 DcmTagKey key = entry->getKey();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1069 DicomTag tag(key.getGroup(), key.getElement());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1070 dcmDataDict.unlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1071 return tag;
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1072 }
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1073 #else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1074 DcmTag tag;
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1075 if (DcmTag::findTagFromName(name, tag).good())
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1076 {
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1077 return DicomTag(tag.getGTag(), tag.getETag());
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1078 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1079 else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1080 {
2470 45de30d4f362 log Sebastien Jodogne <s.jodogne@gmail.com> parents: 2447 diff changeset	1081 LOG(INFO) << "Unknown DICOM tag: \"" << name << "\"";
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	1082 throw OrthancException(ErrorCode_UnknownDicomTag);
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1083 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1084 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1085 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1086
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1087
1655 e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1088 bool FromDcmtkBridge::IsUnknownTag(const DicomTag& tag)
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1089 {
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1090 DcmTag tmp(tag.GetGroup(), tag.GetElement());
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1091 return tmp.isUnknownVR();
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1092 }
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1093
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1094
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1095 void FromDcmtkBridge::ToJson(Json::Value& result,
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1096 const DicomMap& values,
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1097 bool simplify)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1098 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1099 if (result.type() != Json::objectValue)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1100 {
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	1101 throw OrthancException(ErrorCode_BadParameterType);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1102 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1103
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1104 result.clear();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1105
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1106 for (DicomMap::Map::const_iterator
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 465 diff changeset	1107 it = values.map_.begin(); it != values.map_.end(); ++it)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1108 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1109 // TODO Inject PrivateCreator if some is available in the DicomMap?
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1110 const std::string tagName = GetTagName(it->first, "");
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1111
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1112 if (simplify)
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1113 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1114 if (it->second->IsNull())
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1115 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1116 result[tagName] = Json::nullValue;
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1117 }
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1118 else
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1119 {
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1120 // TODO IsBinary
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1121 result[tagName] = it->second->GetContent();
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1122 }
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1123 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1124 else
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1125 {
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1126 Json::Value value = Json::objectValue;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1127
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1128 value["Name"] = tagName;
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1129
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1130 if (it->second->IsNull())
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1131 {
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1132 value["Type"] = "Null";
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1133 value["Value"] = Json::nullValue;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1134 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1135 else
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1136 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1137 // TODO IsBinary
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1138 value["Type"] = "String";
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1139 value["Value"] = it->second->GetContent();
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1140 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1141
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1142 result[it->first.Format()] = value;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1143 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1144 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1145 }
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1146
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1147
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1148 std::string FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType level)
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1149 {
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1150 char uid[100];
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1151
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1152 switch (level)
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1153 {
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1154 case ResourceType_Patient:
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1155 // The "PatientID" field is of type LO (Long String), 64
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1156 // Bytes Maximum. An UUID is of length 36, thus it can be used
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1157 // as a random PatientID.
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	1158 return Toolbox::GenerateUuid();
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1159
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1160 case ResourceType_Instance:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1161 return dcmGenerateUniqueIdentifier(uid, SITE_INSTANCE_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1162
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1163 case ResourceType_Series:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1164 return dcmGenerateUniqueIdentifier(uid, SITE_SERIES_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1165
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1166 case ResourceType_Study:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1167 return dcmGenerateUniqueIdentifier(uid, SITE_STUDY_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1168
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1169 default:
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1170 throw OrthancException(ErrorCode_ParameterOutOfRange);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1171 }
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1172 }
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1173
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1174 bool FromDcmtkBridge::SaveToMemoryBuffer(std::string& buffer,
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1175 DcmDataset& dataSet)
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1176 {
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1177 // Determine the transfer syntax which shall be used to write the
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1178 // information to the file. We always switch to the Little Endian
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1179 // syntax, with explicit length.
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1180
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1181 // http://support.dcmtk.org/docs/dcxfer_8h-source.html
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1182
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1183
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1184 /**
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1185 * Note that up to Orthanc 0.7.1 (inclusive), the
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1186 * "EXS_LittleEndianExplicit" was always used to save the DICOM
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1187 * dataset into memory. We now keep the original transfer syntax
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1188 * (if available).
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1189 **/
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1190 E_TransferSyntax xfer = dataSet.getOriginalXfer();
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1191 if (xfer == EXS_Unknown)
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1192 {
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1193 // No information about the original transfer syntax: This is
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1194 // most probably a DICOM dataset that was read from memory.
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1195 xfer = EXS_LittleEndianExplicit;
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1196 }
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1197
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1198 E_EncodingType encodingType = /opt_sequenceType/ EET_ExplicitLength;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1199
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1200 // Create the meta-header information
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1201 DcmFileFormat ff(&dataSet);
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1202 ff.validateMetaInfo(xfer);
1316 1c8dfedefefe Fix anonymization generating non-portable DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 1307 diff changeset	1203 ff.removeInvalidGroups();
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1204
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1205 // Create a memory buffer with the proper size
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1206 {
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1207 const uint32_t estimatedSize = ff.calcElementLength(xfer, encodingType); // (*)
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1208 buffer.resize(estimatedSize);
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1209 }
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1210
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1211 DcmOutputBufferStream ob(&buffer[0], buffer.size());
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1212
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1213 // Fill the memory buffer with the meta-header and the dataset
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1214 ff.transferInit();
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1215 OFCondition c = ff.write(ob, xfer, encodingType, NULL,
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1216 /opt_groupLength/ EGL_recalcGL,
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1217 /opt_paddingType/ EPD_withoutPadding);
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1218 ff.transferEnd();
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1219
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1220 if (c.good())
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1221 {
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1222 // The DICOM file is successfully written, truncate the target
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1223 // buffer if its size was overestimated by (*)
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1224 ob.flush();
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1225
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1226 size_t effectiveSize = static_cast<size_t>(ob.tell());
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1227 if (effectiveSize < buffer.size())
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1228 {
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1229 buffer.resize(effectiveSize);
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1230 }
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1231
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1232 return true;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1233 }
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1234 else
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1235 {
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1236 // Error
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1237 buffer.clear();
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1238 return false;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1239 }
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1240 }
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1241
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1242
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1243 ValueRepresentation FromDcmtkBridge::LookupValueRepresentation(const DicomTag& tag)
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1244 {
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1245 DcmTag t(tag.GetGroup(), tag.GetElement());
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1246 return Convert(t.getEVR());
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1247 }
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1248
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1249 ValueRepresentation FromDcmtkBridge::Convert(const DcmEVR vr)
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1250 {
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1251 switch (vr)
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1252 {
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1253 case EVR_AE:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1254 return ValueRepresentation_ApplicationEntity;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1255
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1256 case EVR_AS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1257 return ValueRepresentation_AgeString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1258
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1259 case EVR_AT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1260 return ValueRepresentation_AttributeTag;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1261
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1262 case EVR_CS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1263 return ValueRepresentation_CodeString;
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1264
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1265 case EVR_DA:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1266 return ValueRepresentation_Date;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1267
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1268 case EVR_DS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1269 return ValueRepresentation_DecimalString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1270
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1271 case EVR_DT:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1272 return ValueRepresentation_DateTime;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1273
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1274 case EVR_FL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1275 return ValueRepresentation_FloatingPointSingle;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1276
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1277 case EVR_FD:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1278 return ValueRepresentation_FloatingPointDouble;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1279
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1280 case EVR_IS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1281 return ValueRepresentation_IntegerString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1282
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1283 case EVR_LO:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1284 return ValueRepresentation_LongString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1285
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1286 case EVR_LT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1287 return ValueRepresentation_LongText;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1288
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1289 case EVR_OB:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1290 return ValueRepresentation_OtherByte;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1291
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1292 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1293 /*case EVR_OD:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1294 return ValueRepresentation_OtherDouble;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1295
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1296 case EVR_OF:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1297 return ValueRepresentation_OtherFloat;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1298
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1299 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1300 /*case EVR_OL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1301 return ValueRepresentation_OtherLong;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1302
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1303 case EVR_OW:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1304 return ValueRepresentation_OtherWord;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1305
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1306 case EVR_PN:
2007 655489d9165d DicomMap::ParseDicomMetaInformation() Sebastien Jodogne <s.jodogne@gmail.com> parents: 2006 diff changeset	1307 return ValueRepresentation_PersonName;
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1308
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1309 case EVR_SH:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1310 return ValueRepresentation_ShortString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1311
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1312 case EVR_SL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1313 return ValueRepresentation_SignedLong;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1314
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1315 case EVR_SQ:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1316 return ValueRepresentation_Sequence;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1317
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1318 case EVR_SS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1319 return ValueRepresentation_SignedShort;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1320
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1321 case EVR_ST:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1322 return ValueRepresentation_ShortText;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1323
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1324 case EVR_TM:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1325 return ValueRepresentation_Time;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1326
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1327 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1328 /*case EVR_UC:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1329 return ValueRepresentation_UnlimitedCharacters;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1330
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1331 case EVR_UI:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1332 return ValueRepresentation_UniqueIdentifier;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1333
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1334 case EVR_UL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1335 return ValueRepresentation_UnsignedLong;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1336
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1337 case EVR_UN:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1338 return ValueRepresentation_Unknown;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1339
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1340 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1341 /*case EVR_UR:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1342 return ValueRepresentation_UniversalResource;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1343
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1344 case EVR_US:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1345 return ValueRepresentation_UnsignedShort;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1346
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1347 case EVR_UT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1348 return ValueRepresentation_UnlimitedText;
1792 b769623c806c safety check Sebastien Jodogne <s.jodogne@gmail.com> parents: 1765 diff changeset	1349
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1350 default:
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1351 return ValueRepresentation_NotSupported;
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1352 }
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1353 }
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1354
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1355
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1356 static bool IsBinaryTag(const DcmTag& key)
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1357 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1358 return (key.isUnknownVR() \|\|
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1359 key.getEVR() == EVR_OB \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1360 key.getEVR() == EVR_OF \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1361 key.getEVR() == EVR_OW \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1362 key.getEVR() == EVR_UN \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1363 key.getEVR() == EVR_ox);
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1364 }
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1365
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1366
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1367 DcmElement* FromDcmtkBridge::CreateElementForTag(const DicomTag& tag)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1368 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1369 DcmTag key(tag.GetGroup(), tag.GetElement());
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1370
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1371 if (tag.IsPrivate() \|\|
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1372 IsBinaryTag(key))
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1373 {
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1374 return new DcmOtherByteOtherWord(key);
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1375 }
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1376
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1377 switch (key.getEVR())
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1378 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1379 // http://support.dcmtk.org/docs/dcvr_8h-source.html
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1380
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1381 /**
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1382 * Binary types, handled above
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1383 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1384
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1385 case EVR_OB: // other byte
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1386 case EVR_OF: // other float
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1387 case EVR_OW: // other word
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1388 case EVR_UN: // unknown value representation
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1389 case EVR_ox: // OB or OW depending on context
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1390 throw OrthancException(ErrorCode_InternalError);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1391
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1392
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1393 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1394 * String types.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1395 * http://support.dcmtk.org/docs/classDcmByteString.html
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1396 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1397
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1398 case EVR_AS: // age string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1399 return new DcmAgeString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1400
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1401 case EVR_AE: // application entity title
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1402 return new DcmApplicationEntity(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1403
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1404 case EVR_CS: // code string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1405 return new DcmCodeString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1406
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1407 case EVR_DA: // date string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1408 return new DcmDate(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1409
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1410 case EVR_DT: // date time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1411 return new DcmDateTime(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1412
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1413 case EVR_DS: // decimal string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1414 return new DcmDecimalString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1415
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1416 case EVR_IS: // integer string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1417 return new DcmIntegerString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1418
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1419 case EVR_TM: // time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1420 return new DcmTime(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1421
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1422 case EVR_UI: // unique identifier
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1423 return new DcmUniqueIdentifier(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1424
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1425 case EVR_ST: // short text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1426 return new DcmShortText(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1427
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1428 case EVR_LO: // long string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1429 return new DcmLongString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1430
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1431 case EVR_LT: // long text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1432 return new DcmLongText(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1433
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1434 case EVR_UT: // unlimited text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1435 return new DcmUnlimitedText(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1436
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1437 case EVR_SH: // short string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1438 return new DcmShortString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1439
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1440 case EVR_PN: // person name
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1441 return new DcmPersonName(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1442
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1443
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1444 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1445 * Numerical types
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1446 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1447
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1448 case EVR_SL: // signed long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1449 return new DcmSignedLong(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1450
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1451 case EVR_SS: // signed short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1452 return new DcmSignedShort(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1453
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1454 case EVR_UL: // unsigned long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1455 return new DcmUnsignedLong(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1456
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1457 case EVR_US: // unsigned short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1458 return new DcmUnsignedShort(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1459
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1460 case EVR_FL: // float single-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1461 return new DcmFloatingPointSingle(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1462
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1463 case EVR_FD: // float double-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1464 return new DcmFloatingPointDouble(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1465
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1466
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1467 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1468 * Sequence types, should never occur at this point.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1469 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1470
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1471 case EVR_SQ: // sequence of items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1472 throw OrthancException(ErrorCode_ParameterOutOfRange);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1473
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1474
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1475 /**
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1476 * TODO
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1477 **/
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1478
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1479 case EVR_AT: // attribute tag
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1480 throw OrthancException(ErrorCode_NotImplemented);
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1481
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1482
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1483 /**
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1484 * Internal to DCMTK.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1485 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1486
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1487 case EVR_xs: // SS or US depending on context
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1488 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1489 case EVR_na: // na="not applicable", for data which has no VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1490 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1491 case EVR_item: // used internally for items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1492 case EVR_metainfo: // used internally for meta info datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1493 case EVR_dataset: // used internally for datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1494 case EVR_fileFormat: // used internally for DICOM files
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1495 case EVR_dicomDir: // used internally for DICOMDIR objects
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1496 case EVR_dirRecord: // used internally for DICOMDIR records
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1497 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1498 case EVR_pixelItem: // used internally for pixel items in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1499 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1500 case EVR_PixelData: // used internally for uncompressed pixeld data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1501 case EVR_OverlayData: // used internally for overlay data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1502 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1503 default:
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1504 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1505 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1506
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1507 throw OrthancException(ErrorCode_InternalError);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1508 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1509
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1510
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1511
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1512 void FromDcmtkBridge::FillElementWithString(DcmElement& element,
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1513 const DicomTag& tag,
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1514 const std::string& utf8Value,
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1515 bool decodeDataUriScheme,
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1516 Encoding dicomEncoding)
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1517 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1518 std::string binary;
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1519 const std::string* decoded = &utf8Value;
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1520
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1521 if (decodeDataUriScheme &&
2905 ae20fccdd867 refactoring mime types Sebastien Jodogne <s.jodogne@gmail.com> parents: 2831 diff changeset	1522 boost::starts_with(utf8Value, URI_SCHEME_PREFIX_BINARY))
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1523 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1524 std::string mime;
1981 4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1525 if (!Toolbox::DecodeDataUriScheme(mime, binary, utf8Value))
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1526 {
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1527 throw OrthancException(ErrorCode_BadFileFormat);
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1528 }
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1529
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1530 decoded = &binary;
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1531 }
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1532 else if (dicomEncoding != Encoding_Utf8)
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1533 {
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1534 binary = Toolbox::ConvertFromUtf8(utf8Value, dicomEncoding);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1535 decoded = &binary;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1536 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1537
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1538 DcmTag key(tag.GetGroup(), tag.GetElement());
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1539
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1540 if (tag.IsPrivate() \|\|
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1541 IsBinaryTag(key))
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1542 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1543 if (element.putUint8Array((const Uint8*) decoded->c_str(), decoded->size()).good())
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1544 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1545 return;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1546 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1547 else
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1548 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1549 throw OrthancException(ErrorCode_InternalError);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1550 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1551 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1552
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1553 bool ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1554
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1555 try
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1556 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1557 switch (key.getEVR())
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1558 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1559 // http://support.dcmtk.org/docs/dcvr_8h-source.html
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1560
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1561 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1562 * TODO.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1563 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1564
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1565 case EVR_OB: // other byte
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1566 case EVR_OF: // other float
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1567 case EVR_OW: // other word
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1568 case EVR_AT: // attribute tag
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1569 throw OrthancException(ErrorCode_NotImplemented);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1570
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1571 case EVR_UN: // unknown value representation
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1572 throw OrthancException(ErrorCode_ParameterOutOfRange);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1573
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1574
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1575 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1576 * String types.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1577 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1578
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1579 case EVR_DS: // decimal string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1580 case EVR_IS: // integer string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1581 case EVR_AS: // age string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1582 case EVR_DA: // date string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1583 case EVR_DT: // date time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1584 case EVR_TM: // time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1585 case EVR_AE: // application entity title
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1586 case EVR_CS: // code string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1587 case EVR_SH: // short string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1588 case EVR_LO: // long string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1589 case EVR_ST: // short text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1590 case EVR_LT: // long text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1591 case EVR_UT: // unlimited text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1592 case EVR_PN: // person name
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1593 case EVR_UI: // unique identifier
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1594 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1595 ok = element.putString(decoded->c_str()).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1596 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1597 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1598
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1599
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1600 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1601 * Numerical types
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1602 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1603
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1604 case EVR_SL: // signed long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1605 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1606 ok = element.putSint32(boost::lexical_cast<Sint32>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1607 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1608 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1609
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1610 case EVR_SS: // signed short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1611 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1612 ok = element.putSint16(boost::lexical_cast<Sint16>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1613 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1614 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1615
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1616 case EVR_UL: // unsigned long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1617 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1618 ok = element.putUint32(boost::lexical_cast<Uint32>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1619 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1620 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1621
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1622 case EVR_US: // unsigned short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1623 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1624 ok = element.putUint16(boost::lexical_cast<Uint16>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1625 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1626 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1627
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1628 case EVR_FL: // float single-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1629 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1630 ok = element.putFloat32(boost::lexical_cast<float>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1631 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1632 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1633
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1634 case EVR_FD: // float double-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1635 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1636 ok = element.putFloat64(boost::lexical_cast<double>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1637 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1638 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1639
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1640
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1641 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1642 * Sequence types, should never occur at this point.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1643 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1644
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1645 case EVR_SQ: // sequence of items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1646 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1647 ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1648 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1649 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1650
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1651
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1652 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1653 * Internal to DCMTK.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1654 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1655
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1656 case EVR_ox: // OB or OW depending on context
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1657 case EVR_xs: // SS or US depending on context
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1658 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1659 case EVR_na: // na="not applicable", for data which has no VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1660 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1661 case EVR_item: // used internally for items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1662 case EVR_metainfo: // used internally for meta info datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1663 case EVR_dataset: // used internally for datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1664 case EVR_fileFormat: // used internally for DICOM files
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1665 case EVR_dicomDir: // used internally for DICOMDIR objects
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1666 case EVR_dirRecord: // used internally for DICOMDIR records
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1667 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1668 case EVR_pixelItem: // used internally for pixel items in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1669 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1670 case EVR_PixelData: // used internally for uncompressed pixeld data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1671 case EVR_OverlayData: // used internally for overlay data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1672 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1673 default:
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1674 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1675 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1676 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1677 catch (boost::bad_lexical_cast&)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1678 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1679 ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1680 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1681
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1682 if (!ok)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1683 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1684 throw OrthancException(ErrorCode_BadFileFormat,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1685 "While creating a DICOM instance, tag (" + tag.Format() +
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1686 ") has out-of-range value: \"" + (*decoded) + "\"");
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1687 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1688 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1689
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1690
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1691 DcmElement* FromDcmtkBridge::FromJson(const DicomTag& tag,
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1692 const Json::Value& value,
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1693 bool decodeDataUriScheme,
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1694 Encoding dicomEncoding)
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1695 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1696 std::auto_ptr<DcmElement> element;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1697
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1698 switch (value.type())
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1699 {
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1700 case Json::stringValue:
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1701 element.reset(CreateElementForTag(tag));
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1702 FillElementWithString(*element, tag, value.asString(), decodeDataUriScheme, dicomEncoding);
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1703 break;
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1704
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1705 case Json::nullValue:
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1706 element.reset(CreateElementForTag(tag));
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1707 FillElementWithString(*element, tag, "", decodeDataUriScheme, dicomEncoding);
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1708 break;
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1709
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1710 case Json::arrayValue:
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1711 {
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1712 DcmTag key(tag.GetGroup(), tag.GetElement());
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1713 if (key.getEVR() != EVR_SQ)
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1714 {
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1715 throw OrthancException(ErrorCode_BadParameterType);
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1716 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1717
2287 9f3414878c02 Fix Debian #865606 (orthanc FTBFS with libdcmtk-dev 3.6.1~20170228-2) Sebastien Jodogne <s.jodogne@gmail.com> parents: 2275 diff changeset	1718 DcmSequenceOfItems* sequence = new DcmSequenceOfItems(key);
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1719 element.reset(sequence);
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1720
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1721 for (Json::Value::ArrayIndex i = 0; i < value.size(); i++)
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1722 {
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1723 std::auto_ptr<DcmItem> item(new DcmItem);
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1724
2830 ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1725 switch (value[i].type())
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1726 {
2830 ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1727 case Json::objectValue:
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1728 {
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1729 Json::Value::Members members = value[i].getMemberNames();
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1730 for (Json::Value::ArrayIndex j = 0; j < members.size(); j++)
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1731 {
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1732 item->insert(FromJson(ParseTag(members[j]), value[i][members[j]], decodeDataUriScheme, dicomEncoding));
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1733 }
2831 b51233f03e7e missing break Sebastien Jodogne <s.jodogne@gmail.com> parents: 2830 diff changeset	1734 break;
2830 ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1735 }
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1736
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1737 case Json::arrayValue:
2831 b51233f03e7e missing break Sebastien Jodogne <s.jodogne@gmail.com> parents: 2830 diff changeset	1738 {
2830 ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1739 // Lua cannot disambiguate between an empty dictionary
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1740 // and an empty array
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1741 if (value[i].size() != 0)
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1742 {
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1743 throw OrthancException(ErrorCode_BadParameterType);
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1744 }
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1745 break;
2831 b51233f03e7e missing break Sebastien Jodogne <s.jodogne@gmail.com> parents: 2830 diff changeset	1746 }
2830 ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1747
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1748 default:
ab0fd5923c1d fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2662 diff changeset	1749 throw OrthancException(ErrorCode_BadParameterType);
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1750 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1751
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1752 sequence->append(item.release());
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1753 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1754
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1755 break;
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1756 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1757
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1758 default:
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1759 throw OrthancException(ErrorCode_BadParameterType);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1760 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1761
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1762 return element.release();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1763 }
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	1764
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	1765
1924 6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1766 DcmPixelSequence* FromDcmtkBridge::GetPixelSequence(DcmDataset& dataset)
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1767 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1768 DcmElement *element = NULL;
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	1769 if (!dataset.findAndGetElement(DCM_PixelData, element).good())
1924 6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1770 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1771 throw OrthancException(ErrorCode_BadFileFormat);
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1772 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1773
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1774 DcmPixelData& pixelData = dynamic_cast<DcmPixelData&>(*element);
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1775 DcmPixelSequence* pixelSequence = NULL;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1776 if (!pixelData.getEncapsulatedRepresentation
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1777 (dataset.getOriginalXfer(), NULL, pixelSequence).good())
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1778 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1779 return NULL;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1780 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1781 else
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1782 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1783 return pixelSequence;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1784 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1785 }
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1786
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1787
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1788 Encoding FromDcmtkBridge::ExtractEncoding(const Json::Value& json,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1789 Encoding defaultEncoding)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1790 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1791 if (json.type() != Json::objectValue)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1792 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1793 throw OrthancException(ErrorCode_BadParameterType);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1794 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1795
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1796 Encoding encoding = defaultEncoding;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1797
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1798 const Json::Value::Members tags = json.getMemberNames();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1799
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1800 // Look for SpecificCharacterSet (0008,0005) in the JSON file
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1801 for (size_t i = 0; i < tags.size(); i++)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1802 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1803 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1804 if (tag == DICOM_TAG_SPECIFIC_CHARACTER_SET)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1805 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1806 const Json::Value& value = json[tags[i]];
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1807 if (value.type() != Json::stringValue \|\|
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1808 (value.asString().length() != 0 &&
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1809 !GetDicomEncoding(encoding, value.asCString())))
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1810 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1811 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1812 "Unknown encoding while creating DICOM from JSON: " +
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1813 value.toStyledString());
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1814 }
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1815
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1816 if (value.asString().length() == 0)
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1817 {
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1818 return defaultEncoding;
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1819 }
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1820 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1821 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1822
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1823 return encoding;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1824 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1825
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1826
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1827 static void SetString(DcmDataset& target,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1828 const DcmTag& tag,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1829 const std::string& value)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1830 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1831 if (!target.putAndInsertString(tag, value.c_str()).good())
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1832 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1833 throw OrthancException(ErrorCode_InternalError);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1834 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1835 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1836
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1837
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1838 DcmDataset* FromDcmtkBridge::FromJson(const Json::Value& json, // Encoded using UTF-8
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1839 bool generateIdentifiers,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1840 bool decodeDataUriScheme,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1841 Encoding defaultEncoding)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1842 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1843 std::auto_ptr<DcmDataset> result(new DcmDataset);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1844 Encoding encoding = ExtractEncoding(json, defaultEncoding);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1845
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1846 SetString(*result, DCM_SpecificCharacterSet, GetDicomSpecificCharacterSet(encoding));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1847
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1848 const Json::Value::Members tags = json.getMemberNames();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1849
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1850 bool hasPatientId = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1851 bool hasStudyInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1852 bool hasSeriesInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1853 bool hasSopInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1854
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1855 for (size_t i = 0; i < tags.size(); i++)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1856 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1857 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1858 const Json::Value& value = json[tags[i]];
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1859
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1860 if (tag == DICOM_TAG_PATIENT_ID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1861 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1862 hasPatientId = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1863 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1864 else if (tag == DICOM_TAG_STUDY_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1865 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1866 hasStudyInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1867 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1868 else if (tag == DICOM_TAG_SERIES_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1869 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1870 hasSeriesInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1871 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1872 else if (tag == DICOM_TAG_SOP_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1873 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1874 hasSopInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1875 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1876
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1877 if (tag != DICOM_TAG_SPECIFIC_CHARACTER_SET)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1878 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1879 std::auto_ptr<DcmElement> element(FromDcmtkBridge::FromJson(tag, value, decodeDataUriScheme, encoding));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1880 const DcmTagKey& tag = element->getTag();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1881
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1882 result->findAndDeleteElement(tag);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1883
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1884 DcmElement* tmp = element.release();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1885 if (!result->insert(tmp, false, false).good())
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1886 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1887 delete tmp;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1888 throw OrthancException(ErrorCode_InternalError);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1889 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1890 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1891 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1892
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1893 if (!hasPatientId &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1894 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1895 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1896 SetString(*result, DCM_PatientID, GenerateUniqueIdentifier(ResourceType_Patient));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1897 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1898
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1899 if (!hasStudyInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1900 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1901 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1902 SetString(*result, DCM_StudyInstanceUID, GenerateUniqueIdentifier(ResourceType_Study));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1903 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1904
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1905 if (!hasSeriesInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1906 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1907 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1908 SetString(*result, DCM_SeriesInstanceUID, GenerateUniqueIdentifier(ResourceType_Series));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1909 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1910
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1911 if (!hasSopInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1912 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1913 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1914 SetString(*result, DCM_SOPInstanceUID, GenerateUniqueIdentifier(ResourceType_Instance));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1915 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1916
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1917 return result.release();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1918 }
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1919
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1920
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1921 DcmFileFormat* FromDcmtkBridge::LoadFromMemoryBuffer(const void* buffer,
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1922 size_t size)
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1923 {
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1924 DcmInputBufferStream is;
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1925 if (size > 0)
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1926 {
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1927 is.setBuffer(buffer, size);
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1928 }
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1929 is.setEos();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1930
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1931 std::auto_ptr<DcmFileFormat> result(new DcmFileFormat);
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1932
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1933 result->transferInit();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1934 if (!result->read(is).good())
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1935 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1936 throw OrthancException(ErrorCode_BadFileFormat,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1937 "Cannot parse an invalid DICOM file (size: " +
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	1938 boost::lexical_cast<std::string>(size) + " bytes)");
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1939 }
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1940
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1941 result->loadAllDataIntoMemory();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1942 result->transferEnd();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1943
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1944 return result.release();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1945 }
1998 9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1946
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1947
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1948 void FromDcmtkBridge::FromJson(DicomMap& target,
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1949 const Json::Value& source)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1950 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1951 if (source.type() != Json::objectValue)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1952 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1953 throw OrthancException(ErrorCode_BadFileFormat);
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1954 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1955
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1956 target.Clear();
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1957
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1958 Json::Value::Members members = source.getMemberNames();
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1959
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1960 for (size_t i = 0; i < members.size(); i++)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1961 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1962 const Json::Value& value = source[members[i]];
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1963
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1964 if (value.type() != Json::stringValue)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1965 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1966 throw OrthancException(ErrorCode_BadFileFormat);
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1967 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1968
2007 655489d9165d DicomMap::ParseDicomMetaInformation() Sebastien Jodogne <s.jodogne@gmail.com> parents: 2006 diff changeset	1969 target.SetValue(ParseTag(members[i]), value.asString(), false);
1998 9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1970 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1971 }
2207 6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1972
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1973
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1974 void FromDcmtkBridge::ChangeStringEncoding(DcmItem& dataset,
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1975 Encoding source,
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1976 Encoding target)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1977 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1978 // Recursive exploration of a dataset to change the encoding of
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1979 // each string-like element
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1980
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1981 if (source == target)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1982 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1983 return;
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1984 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1985
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1986 for (unsigned long i = 0; i < dataset.card(); i++)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1987 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1988 DcmElement* element = dataset.getElement(i);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1989 if (element)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1990 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1991 if (element->isLeaf())
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1992 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1993 char *c = NULL;
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1994 if (element->isaString() &&
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1995 element->getString(c).good() &&
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1996 c != NULL)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1997 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1998 std::string a = Toolbox::ConvertToUtf8(c, source);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1999 std::string b = Toolbox::ConvertFromUtf8(a, target);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2000 element->putString(b.c_str());
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2001 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2002 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2003 else
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2004 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2005 // "All subclasses of DcmElement except for DcmSequenceOfItems
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2006 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2007 // etc. are not." The following dynamic_cast is thus OK.
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2008 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(*element);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2009
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2010 for (unsigned long j = 0; j < sequence.card(); j++)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2011 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2012 ChangeStringEncoding(*sequence.getItem(j), source, target);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2013 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2014 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2015 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2016 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2017 }
2209 e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2018
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2019
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2020 bool FromDcmtkBridge::LookupTransferSyntax(std::string& result,
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2021 DcmFileFormat& dicom)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2022 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2023 const char* value = NULL;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2024
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2025 if (dicom.getMetaInfo() != NULL &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2026 dicom.getMetaInfo()->findAndGetString(DCM_TransferSyntaxUID, value).good() &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2027 value != NULL)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2028 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2029 result.assign(value);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2030 return true;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2031 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2032 else
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2033 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2034 return false;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2035 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2036 }
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2037
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2038
2232 3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi Sebastien Jodogne <s.jodogne@gmail.com> parents: 2218 diff changeset	2039 #if ORTHANC_ENABLE_LUA == 1
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2040 void FromDcmtkBridge::ExecuteToDicom(DicomMap& target,
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2041 LuaFunctionCall& call)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2042 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2043 Json::Value output;
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2044 call.ExecuteToJson(output, true /* keep strings */);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2045
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2046 target.Clear();
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2047
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2048 if (output.type() == Json::arrayValue &&
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2049 output.size() == 0)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2050 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2051 // This case happens for empty tables
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2052 return;
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2053 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2054
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2055 if (output.type() != Json::objectValue)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2056 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	2057 throw OrthancException(ErrorCode_LuaBadOutput,
3156 0c2b719c3796 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 3117 diff changeset	2058 "Lua: The script must return a table");
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2059 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2060
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2061 Json::Value::Members members = output.getMemberNames();
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2062
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2063 for (size_t i = 0; i < members.size(); i++)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2064 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2065 if (output[members[i]].type() != Json::stringValue)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2066 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	2067 throw OrthancException(ErrorCode_LuaBadOutput,
3156 0c2b719c3796 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 3117 diff changeset	2068 "Lua: The script must return a table "
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	2069 "mapping names of DICOM tags to strings");
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2070 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2071
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2072 DicomTag tag(ParseTag(members[i]));
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2073 target.SetValue(tag, output[members[i]].asString(), false);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2074 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2075 }
2232 3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi Sebastien Jodogne <s.jodogne@gmail.com> parents: 2218 diff changeset	2076 #endif
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2077
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2078
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2079 void FromDcmtkBridge::ExtractDicomSummary(DicomMap& target,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2080 DcmItem& dataset)
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2081 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2082 ExtractDicomSummary(target, dataset,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2083 ORTHANC_MAXIMUM_TAG_LENGTH,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2084 GetDefaultDicomEncoding());
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2085 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2086
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2087
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2088 void FromDcmtkBridge::ExtractDicomAsJson(Json::Value& target,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2089 DcmDataset& dataset,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2090 const std::set<DicomTag>& ignoreTagLength)
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2091 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2092 ExtractDicomAsJson(target, dataset,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2093 DicomToJsonFormat_Full,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2094 DicomToJsonFlags_Default,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2095 ORTHANC_MAXIMUM_TAG_LENGTH,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2096 GetDefaultDicomEncoding(),
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2097 ignoreTagLength);
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2098 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2099
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2100
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2101 void FromDcmtkBridge::InitializeCodecs()
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2102 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2103 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
2528 832217e4e872 old warnings turned into info Sebastien Jodogne <s.jodogne@gmail.com> parents: 2522 diff changeset	2104 LOG(INFO) << "Registering JPEG Lossless codecs in DCMTK";
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2105 DJLSDecoderRegistration::registerCodecs();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2106 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2107
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2108 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
2528 832217e4e872 old warnings turned into info Sebastien Jodogne <s.jodogne@gmail.com> parents: 2522 diff changeset	2109 LOG(INFO) << "Registering JPEG codecs in DCMTK";
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2110 DJDecoderRegistration::registerCodecs();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2111 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2112 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2113
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2114
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2115 void FromDcmtkBridge::FinalizeCodecs()
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2116 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2117 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2118 // Unregister JPEG-LS codecs
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2119 DJLSDecoderRegistration::cleanup();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2120 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2121
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2122 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2123 // Unregister JPEG codecs
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2124 DJDecoderRegistration::cleanup();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2125 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2126 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2127
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2128
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2129
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2130 // Forward declaration
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2131 static void ApplyVisitorToElement(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2132 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2133 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2134 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2135 Encoding encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2136
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2137 static void ApplyVisitorToDataset(DcmItem& dataset,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2138 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2139 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2140 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2141 Encoding encoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2142 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2143 assert(parentTags.size() == parentIndexes.size());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2144
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2145 for (unsigned long i = 0; i < dataset.card(); i++)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2146 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2147 DcmElement* element = dataset.getElement(i);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2148 if (element == NULL)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2149 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2150 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2151 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2152 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2153 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2154 ApplyVisitorToElement(*element, visitor, parentTags, parentIndexes, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2155 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2156 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2157 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2158
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2159
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2160 static void ApplyVisitorToLeaf(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2161 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2162 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2163 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2164 const DicomTag& tag,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2165 Encoding encoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2166 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2167 // TODO - Merge this function with ConvertLeafElement()
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2168
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2169 assert(element.isLeaf());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2170
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2171 DcmEVR evr = element.getTag().getEVR();
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2172 ValueRepresentation vr = FromDcmtkBridge::Convert(evr);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2173
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2174 char *c = NULL;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2175 if (element.isaString() &&
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2176 element.getString(c).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2177 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2178 std::string utf8;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2179
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2180 if (c != NULL) // This case corresponds to the empty string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2181 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2182 std::string s(c);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2183 utf8 = Toolbox::ConvertToUtf8(s, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2184 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2185
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2186 std::string newValue;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2187 ITagVisitor::Action action = visitor.VisitString
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2188 (newValue, parentTags, parentIndexes, tag, vr, utf8);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2189
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2190 switch (action)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2191 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2192 case ITagVisitor::Action_None:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2193 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2194
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2195 case ITagVisitor::Action_Replace:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2196 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2197 std::string s = Toolbox::ConvertFromUtf8(newValue, encoding);
2522 ce2dfba9417c fix build with dcmtk 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 2513 diff changeset	2198 if (element.putString(s.c_str()) != EC_Normal)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2199 {
2954 d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	2200 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException Sebastien Jodogne <s.jodogne@gmail.com> parents: 2905 diff changeset	2201 "Cannot replace value of tag: " + tag.Format());
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2202 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2203
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2204 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2205 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2206
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2207 default:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2208 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2209 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2210
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2211 return; // We're done
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2212 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2213
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2214
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2215 try
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2216 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2217 // http://support.dcmtk.org/docs/dcvr_8h-source.html
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2218 switch (element.getVR())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2219 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2220
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2221 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2222 * Deal with binary data (including PixelData).
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2223 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2224
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2225 case EVR_OB: // other byte
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2226 case EVR_OF: // other float
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2227 case EVR_OW: // other word
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2228 case EVR_UN: // unknown value representation
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2229 case EVR_ox: // OB or OW depending on context
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2230 case EVR_DS: // decimal string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2231 case EVR_IS: // integer string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2232 case EVR_AS: // age string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2233 case EVR_DA: // date string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2234 case EVR_DT: // date time string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2235 case EVR_TM: // time string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2236 case EVR_AE: // application entity title
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2237 case EVR_CS: // code string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2238 case EVR_SH: // short string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2239 case EVR_LO: // long string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2240 case EVR_ST: // short text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2241 case EVR_LT: // long text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2242 case EVR_UT: // unlimited text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2243 case EVR_PN: // person name
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2244 case EVR_UI: // unique identifier
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2245 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2246 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2247 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2248 Uint8* data = NULL;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2249
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2250 if (element.getUint8Array(data) == EC_Normal)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2251 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2252 visitor.VisitBinary(parentTags, parentIndexes, tag, vr, data, element.getLength());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2253 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2254 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2255 {
3195 880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2256 visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2257 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2258
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2259 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2260 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2261
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2262 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2263 * Numeric types
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2264 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2265
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2266 case EVR_SL: // signed long
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2267 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2268 DcmSignedLong& content = dynamic_cast<DcmSignedLong&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2269
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2270 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2271 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2272
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2273 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2274 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2275 Sint32 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2276 if (content.getSint32(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2277 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2278 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2279 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2280 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2281
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2282 visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2283 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2284 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2285
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2286 case EVR_SS: // signed short
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2287 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2288 DcmSignedShort& content = dynamic_cast<DcmSignedShort&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2289
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2290 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2291 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2292
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2293 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2294 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2295 Sint16 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2296 if (content.getSint16(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2297 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2298 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2299 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2300 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2301
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2302 visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2303 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2304 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2305
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2306 case EVR_UL: // unsigned long
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2307 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2308 DcmUnsignedLong& content = dynamic_cast<DcmUnsignedLong&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2309
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2310 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2311 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2312
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2313 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2314 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2315 Uint32 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2316 if (content.getUint32(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2317 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2318 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2319 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2320 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2321
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2322 visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2323 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2324 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2325
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2326 case EVR_US: // unsigned short
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2327 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2328 DcmUnsignedShort& content = dynamic_cast<DcmUnsignedShort&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2329
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2330 std::vector<int64_t> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2331 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2332
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2333 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2334 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2335 Uint16 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2336 if (content.getUint16(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2337 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2338 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2339 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2340 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2341
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2342 visitor.VisitIntegers(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2343 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2344 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2345
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2346 case EVR_FL: // float single-precision
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2347 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2348 DcmFloatingPointSingle& content = dynamic_cast<DcmFloatingPointSingle&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2349
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2350 std::vector<double> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2351 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2352
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2353 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2354 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2355 Float32 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2356 if (content.getFloat32(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2357 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2358 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2359 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2360 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2361
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2362 visitor.VisitDoubles(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2363 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2364 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2365
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2366 case EVR_FD: // float double-precision
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2367 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2368 DcmFloatingPointDouble& content = dynamic_cast<DcmFloatingPointDouble&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2369
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2370 std::vector<double> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2371 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2372
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2373 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2374 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2375 Float64 f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2376 if (content.getFloat64(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2377 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2378 values.push_back(f);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2379 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2380 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2381
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2382 visitor.VisitDoubles(parentTags, parentIndexes, tag, vr, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2383 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2384 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2385
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2386
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2387 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2388 * Attribute tag.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2389 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2390
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2391 case EVR_AT:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2392 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2393 DcmAttributeTag& content = dynamic_cast<DcmAttributeTag&>(element);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2394
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2395 std::vector<DicomTag> values;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2396 values.reserve(content.getVM());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2397
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2398 for (unsigned long i = 0; i < content.getVM(); i++)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2399 {
3194 47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2400 DcmTagKey f;
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2401 if (content.getTagVal(f, i).good())
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2402 {
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2403 DicomTag t(f.getGroup(), f.getElement());
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2404 values.push_back(t);
47ef29168698 support of value multiplicity in ITagVisitor Sebastien Jodogne <s.jodogne@gmail.com> parents: 3156 diff changeset	2405 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2406 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2407
3195 880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2408 assert(vr == ValueRepresentation_AttributeTag);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2409 visitor.VisitAttributes(parentTags, parentIndexes, tag, values);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2410 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2411 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2412
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2413
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2414 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2415 * Sequence types, should never occur at this point because of
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2416 * "element.isLeaf()".
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2417 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2418
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2419 case EVR_SQ: // sequence of items
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2420 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2421
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2422
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2423 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2424 * Internal to DCMTK.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2425 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2426
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2427 case EVR_xs: // SS or US depending on context
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2428 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2429 case EVR_na: // na="not applicable", for data which has no VR
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2430 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2431 case EVR_item: // used internally for items
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2432 case EVR_metainfo: // used internally for meta info datasets
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2433 case EVR_dataset: // used internally for datasets
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2434 case EVR_fileFormat: // used internally for DICOM files
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2435 case EVR_dicomDir: // used internally for DICOMDIR objects
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2436 case EVR_dirRecord: // used internally for DICOMDIR records
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2437 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2438 case EVR_pixelItem: // used internally for pixel items in a compressed image
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2439 case EVR_PixelData: // used internally for uncompressed pixeld data
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2440 case EVR_OverlayData: // used internally for overlay data
3195 880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2441 visitor.VisitNotSupported(parentTags, parentIndexes, tag, vr);
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2442 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2443
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2444
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2445 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2446 * Default case.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2447 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2448
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2449 default:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2450 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2451 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2452 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2453 catch (boost::bad_lexical_cast&)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2454 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2455 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2456 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2457 catch (std::bad_cast&)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2458 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2459 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2460 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2461 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2462
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2463
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2464 static void ApplyVisitorToElement(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2465 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2466 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2467 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2468 Encoding encoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2469 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2470 assert(parentTags.size() == parentIndexes.size());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2471
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2472 DicomTag tag(FromDcmtkBridge::Convert(element.getTag()));
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2473
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2474 if (element.isLeaf())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2475 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2476 ApplyVisitorToLeaf(element, visitor, parentTags, parentIndexes, tag, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2477 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2478 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2479 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2480 // "All subclasses of DcmElement except for DcmSequenceOfItems
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2481 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2482 // etc. are not." The following dynamic_cast is thus OK.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2483 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2484
3195 880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2485 if (sequence.card() == 0)
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2486 {
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2487 visitor.VisitEmptySequence(parentTags, parentIndexes, tag);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2488 }
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2489 else
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2490 {
3195 880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2491 std::vector<DicomTag> tags = parentTags;
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2492 std::vector<size_t> indexes = parentIndexes;
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2493 tags.push_back(tag);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2494 indexes.push_back(0);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2495
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2496 for (unsigned long i = 0; i < sequence.card(); i++)
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2497 {
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2498 indexes.back() = static_cast<size_t>(i);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2499 DcmItem* child = sequence.getItem(i);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2500 ApplyVisitorToDataset(*child, visitor, tags, indexes, encoding);
880e4161c312 cont Sebastien Jodogne <s.jodogne@gmail.com> parents: 3194 diff changeset	2501 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2502 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2503 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2504 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2505
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2506
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2507 void FromDcmtkBridge::Apply(DcmItem& dataset,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2508 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2509 Encoding defaultEncoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2510 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2511 std::vector<DicomTag> parentTags;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2512 std::vector<size_t> parentIndexes;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2513 Encoding encoding = DetectEncoding(dataset, defaultEncoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2514 ApplyVisitorToDataset(dataset, visitor, parentTags, parentIndexes, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2515 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	2516 }

Mercurial > hg > orthanc

annotate Core/DicomParsing/FromDcmtkBridge.cpp @ 3195:880e4161c312