Mercurial > hg > orthanc
annotate OrthancServer/Sources/ServerIndex.cpp @ 4570:648defffc8cc db-changes
new enum: TransactionType
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Mon, 08 Mar 2021 16:04:56 +0100 |
parents | 19ea4ecd6d9a |
children | 9224e107d613 |
rev | line source |
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0 | 1 /** |
62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
0 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
8 * modify it under the terms of the GNU General Public License as | |
9 * published by the Free Software Foundation, either version 3 of the | |
10 * License, or (at your option) any later version. | |
136 | 11 * |
12 * In addition, as a special exception, the copyright holders of this | |
13 * program give permission to link the code of its release with the | |
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
15 * that use the same license as the "OpenSSL" library), and distribute | |
16 * the linked executables. You must obey the GNU General Public License | |
17 * in all respects for all of the code used other than "OpenSSL". If you | |
18 * modify file(s) with this exception, you may extend this exception to | |
19 * your version of the file(s), but you are not obligated to do so. If | |
20 * you do not wish to do so, delete this exception statement from your | |
21 * version. If you delete this exception statement from all source files | |
22 * in the program, then also delete it here. | |
0 | 23 * |
24 * This program is distributed in the hope that it will be useful, but | |
25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
27 * General Public License for more details. | |
28 * | |
29 * You should have received a copy of the GNU General Public License | |
30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
31 **/ | |
32 | |
33 | |
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34 #include "PrecompiledHeadersServer.h" |
0 | 35 #include "ServerIndex.h" |
36 | |
6 | 37 #ifndef NOMINMAX |
2 | 38 #define NOMINMAX |
6 | 39 #endif |
40 | |
4045 | 41 #include "../../OrthancFramework/Sources/DicomFormat/DicomArray.h" |
42 #include "../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
43 #include "../../OrthancFramework/Sources/DicomParsing/ParsedDicomFile.h" | |
44 #include "../../OrthancFramework/Sources/Logging.h" | |
45 #include "../../OrthancFramework/Sources/Toolbox.h" | |
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46 |
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47 #include "Database/ResourcesContent.h" |
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48 #include "OrthancConfiguration.h" |
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49 #include "Search/DatabaseLookup.h" |
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50 #include "Search/DicomTagConstraint.h" |
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51 #include "ServerContext.h" |
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52 #include "ServerIndexChange.h" |
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53 #include "ServerToolbox.h" |
0 | 54 |
55 #include <boost/lexical_cast.hpp> | |
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56 #include <boost/tuple/tuple.hpp> |
0 | 57 #include <stdio.h> |
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58 #include <stack> |
0 | 59 |
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60 static const uint64_t MEGA_BYTES = 1024 * 1024; |
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61 |
62 | 62 namespace Orthanc |
0 | 63 { |
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64 static void CopyListToVector(std::vector<std::string>& target, |
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65 const std::list<std::string>& source) |
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66 { |
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67 target.resize(source.size()); |
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68 |
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69 size_t pos = 0; |
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70 |
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71 for (std::list<std::string>::const_iterator |
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72 it = source.begin(); it != source.end(); ++it) |
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73 { |
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74 target[pos] = *it; |
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75 pos ++; |
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76 } |
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77 } |
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78 |
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79 |
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80 class ServerIndex::Listener : public IDatabaseListener |
0 | 81 { |
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82 private: |
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83 struct FileToRemove |
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84 { |
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85 private: |
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86 std::string uuid_; |
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87 FileContentType type_; |
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88 |
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89 public: |
4205 | 90 explicit FileToRemove(const FileInfo& info) : |
91 uuid_(info.GetUuid()), | |
92 type_(info.GetContentType()) | |
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93 { |
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94 } |
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95 |
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96 const std::string& GetUuid() const |
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97 { |
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98 return uuid_; |
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99 } |
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100 |
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101 FileContentType GetContentType() const |
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102 { |
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103 return type_; |
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104 } |
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105 }; |
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106 |
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107 ServerContext& context_; |
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108 bool hasRemainingLevel_; |
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109 ResourceType remainingType_; |
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110 std::string remainingPublicId_; |
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111 std::list<FileToRemove> pendingFilesToRemove_; |
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112 std::list<ServerIndexChange> pendingChanges_; |
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113 uint64_t sizeOfFilesToRemove_; |
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114 bool insideTransaction_; |
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115 |
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116 void Reset() |
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117 { |
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118 sizeOfFilesToRemove_ = 0; |
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119 hasRemainingLevel_ = false; |
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120 pendingFilesToRemove_.clear(); |
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121 pendingChanges_.clear(); |
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122 } |
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123 |
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124 public: |
4205 | 125 explicit Listener(ServerContext& context) : |
126 context_(context), | |
127 insideTransaction_(false) | |
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128 { |
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129 Reset(); |
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130 assert(ResourceType_Patient < ResourceType_Study && |
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131 ResourceType_Study < ResourceType_Series && |
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132 ResourceType_Series < ResourceType_Instance); |
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133 } |
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134 |
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135 void StartTransaction() |
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136 { |
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137 Reset(); |
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138 insideTransaction_ = true; |
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139 } |
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140 |
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141 void EndTransaction() |
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142 { |
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143 insideTransaction_ = false; |
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144 } |
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146 uint64_t GetSizeOfFilesToRemove() |
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147 { |
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148 return sizeOfFilesToRemove_; |
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149 } |
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150 |
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151 void CommitFilesToRemove() |
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152 { |
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153 for (std::list<FileToRemove>::const_iterator |
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154 it = pendingFilesToRemove_.begin(); |
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155 it != pendingFilesToRemove_.end(); ++it) |
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156 { |
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157 try |
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158 { |
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159 context_.RemoveFile(it->GetUuid(), it->GetContentType()); |
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160 } |
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161 catch (OrthancException& e) |
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162 { |
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163 LOG(ERROR) << "Unable to remove an attachment from the storage area: " |
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164 << it->GetUuid() << " (type: " << EnumerationToString(it->GetContentType()) << ")"; |
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165 } |
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166 } |
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167 } |
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168 |
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169 void CommitChanges() |
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170 { |
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171 for (std::list<ServerIndexChange>::const_iterator |
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172 it = pendingChanges_.begin(); |
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173 it != pendingChanges_.end(); ++it) |
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174 { |
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175 context_.SignalChange(*it); |
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176 } |
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177 } |
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178 |
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179 virtual void SignalRemainingAncestor(ResourceType parentType, |
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180 const std::string& publicId) |
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181 { |
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182 LOG(TRACE) << "Remaining ancestor \"" << publicId << "\" (" << parentType << ")"; |
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183 |
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184 if (hasRemainingLevel_) |
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185 { |
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186 if (parentType < remainingType_) |
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187 { |
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188 remainingType_ = parentType; |
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189 remainingPublicId_ = publicId; |
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190 } |
1158 | 191 } |
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192 else |
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193 { |
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194 hasRemainingLevel_ = true; |
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195 remainingType_ = parentType; |
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196 remainingPublicId_ = publicId; |
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197 } |
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198 } |
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199 |
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200 virtual void SignalFileDeleted(const FileInfo& info) |
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201 { |
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202 assert(Toolbox::IsUuid(info.GetUuid())); |
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203 pendingFilesToRemove_.push_back(FileToRemove(info)); |
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204 sizeOfFilesToRemove_ += info.GetCompressedSize(); |
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205 } |
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206 |
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207 virtual void SignalChange(const ServerIndexChange& change) |
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208 { |
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209 LOG(TRACE) << "Change related to resource " << change.GetPublicId() << " of type " |
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210 << EnumerationToString(change.GetResourceType()) << ": " |
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211 << EnumerationToString(change.GetChangeType()); |
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212 |
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213 if (insideTransaction_) |
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214 { |
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215 pendingChanges_.push_back(change); |
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216 } |
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217 else |
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218 { |
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219 context_.SignalChange(change); |
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220 } |
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221 } |
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222 |
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223 bool HasRemainingLevel() const |
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224 { |
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225 return hasRemainingLevel_; |
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226 } |
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227 |
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228 ResourceType GetRemainingType() const |
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229 { |
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230 assert(HasRemainingLevel()); |
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231 return remainingType_; |
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232 } |
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233 |
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234 const std::string& GetRemainingPublicId() const |
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235 { |
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236 assert(HasRemainingLevel()); |
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237 return remainingPublicId_; |
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238 } |
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239 }; |
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241 | |
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242 class ServerIndex::Transaction |
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243 { |
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244 private: |
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245 ServerIndex& index_; |
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246 std::unique_ptr<IDatabaseWrapper::ITransaction> transaction_; |
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247 bool isCommitted_; |
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249 public: |
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250 explicit Transaction(ServerIndex& index, |
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251 TransactionType type) : |
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252 index_(index), |
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253 isCommitted_(false) |
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254 { |
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255 transaction_.reset(index_.db_.StartTransaction(type)); |
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256 index_.listener_->StartTransaction(); |
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257 } |
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258 |
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259 ~Transaction() |
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260 { |
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261 index_.listener_->EndTransaction(); |
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262 |
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263 if (!isCommitted_) |
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264 { |
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265 transaction_->Rollback(); |
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266 } |
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267 } |
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268 |
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269 void Commit(uint64_t sizeOfAddedFiles) |
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270 { |
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271 if (!isCommitted_) |
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272 { |
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273 int64_t delta = (static_cast<int64_t>(sizeOfAddedFiles) - |
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274 static_cast<int64_t>(index_.listener_->GetSizeOfFilesToRemove())); |
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275 |
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276 transaction_->Commit(delta); |
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277 |
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278 // We can remove the files once the SQLite transaction has |
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279 // been successfully committed. Some files might have to be |
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280 // deleted because of recycling. |
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281 index_.listener_->CommitFilesToRemove(); |
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282 |
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283 // Send all the pending changes to the Orthanc plugins |
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284 index_.listener_->CommitChanges(); |
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285 |
278
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286 isCommitted_ = true; |
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287 } |
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288 } |
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289 }; |
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290 |
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291 |
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292 class ServerIndex::UnstableResourcePayload |
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293 { |
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294 private: |
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295 ResourceType type_; |
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296 std::string publicId_; |
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297 boost::posix_time::ptime time_; |
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298 |
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299 public: |
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300 UnstableResourcePayload() : type_(ResourceType_Instance) |
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301 { |
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302 } |
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303 |
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304 UnstableResourcePayload(Orthanc::ResourceType type, |
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305 const std::string& publicId) : |
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306 type_(type), |
4205 | 307 publicId_(publicId), |
308 time_(boost::posix_time::second_clock::local_time()) | |
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309 { |
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310 } |
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311 |
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312 unsigned int GetAge() const |
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313 { |
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314 return (boost::posix_time::second_clock::local_time() - time_).total_seconds(); |
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315 } |
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316 |
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317 ResourceType GetResourceType() const |
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318 { |
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319 return type_; |
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320 } |
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321 |
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322 const std::string& GetPublicId() const |
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323 { |
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324 return publicId_; |
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325 } |
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326 }; |
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327 |
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328 |
3027 | 329 class ServerIndex::MainDicomTagsRegistry : public boost::noncopyable |
330 { | |
331 private: | |
332 class TagInfo | |
333 { | |
334 private: | |
335 ResourceType level_; | |
336 DicomTagType type_; | |
337 | |
338 public: | |
339 TagInfo() | |
340 { | |
341 } | |
342 | |
343 TagInfo(ResourceType level, | |
344 DicomTagType type) : | |
345 level_(level), | |
346 type_(type) | |
347 { | |
348 } | |
349 | |
350 ResourceType GetLevel() const | |
351 { | |
352 return level_; | |
353 } | |
354 | |
355 DicomTagType GetType() const | |
356 { | |
357 return type_; | |
358 } | |
359 }; | |
360 | |
361 typedef std::map<DicomTag, TagInfo> Registry; | |
362 | |
363 | |
364 Registry registry_; | |
365 | |
366 void LoadTags(ResourceType level) | |
367 { | |
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368 { |
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369 const DicomTag* tags = NULL; |
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370 size_t size; |
3027 | 371 |
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372 ServerToolbox::LoadIdentifiers(tags, size, level); |
3027 | 373 |
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374 for (size_t i = 0; i < size; i++) |
3027 | 375 { |
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376 if (registry_.find(tags[i]) == registry_.end()) |
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377 { |
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378 registry_[tags[i]] = TagInfo(level, DicomTagType_Identifier); |
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379 } |
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380 else |
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381 { |
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382 // These patient-level tags are copied in the study level |
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383 assert(level == ResourceType_Study && |
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384 (tags[i] == DICOM_TAG_PATIENT_ID || |
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385 tags[i] == DICOM_TAG_PATIENT_NAME || |
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386 tags[i] == DICOM_TAG_PATIENT_BIRTH_DATE)); |
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387 } |
3027 | 388 } |
389 } | |
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390 |
3027 | 391 { |
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392 std::set<DicomTag> tags; |
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393 DicomMap::GetMainDicomTags(tags, level); |
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394 |
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395 for (std::set<DicomTag>::const_iterator |
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396 tag = tags.begin(); tag != tags.end(); ++tag) |
3027 | 397 { |
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398 if (registry_.find(*tag) == registry_.end()) |
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399 { |
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400 registry_[*tag] = TagInfo(level, DicomTagType_Main); |
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401 } |
3027 | 402 } |
403 } | |
404 } | |
405 | |
406 public: | |
407 MainDicomTagsRegistry() | |
408 { | |
409 LoadTags(ResourceType_Patient); | |
410 LoadTags(ResourceType_Study); | |
411 LoadTags(ResourceType_Series); | |
412 LoadTags(ResourceType_Instance); | |
413 } | |
414 | |
415 void LookupTag(ResourceType& level, | |
416 DicomTagType& type, | |
417 const DicomTag& tag) const | |
418 { | |
419 Registry::const_iterator it = registry_.find(tag); | |
420 | |
421 if (it == registry_.end()) | |
422 { | |
423 // Default values | |
424 level = ResourceType_Instance; | |
425 type = DicomTagType_Generic; | |
426 } | |
427 else | |
428 { | |
429 level = it->second.GetLevel(); | |
430 type = it->second.GetType(); | |
431 } | |
432 } | |
433 }; | |
434 | |
435 | |
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436 void ServerIndex::FlushThread(ServerIndex* that, |
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437 unsigned int threadSleep) |
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438 { |
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439 // By default, wait for 10 seconds before flushing |
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440 unsigned int sleep = 10; |
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441 |
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442 try |
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443 { |
744 | 444 boost::mutex::scoped_lock lock(that->mutex_); |
1239 | 445 std::string sleepString; |
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446 |
1247 | 447 if (that->db_.LookupGlobalProperty(sleepString, GlobalProperty_FlushSleep) && |
1239 | 448 Toolbox::IsInteger(sleepString)) |
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449 { |
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450 sleep = boost::lexical_cast<unsigned int>(sleepString); |
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451 } |
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452 } |
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453 catch (boost::bad_lexical_cast&) |
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454 { |
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455 } |
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456 |
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457 LOG(INFO) << "Starting the database flushing thread (sleep = " << sleep << ")"; |
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458 |
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459 unsigned int count = 0; |
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460 |
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461 while (!that->done_) |
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462 { |
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463 boost::this_thread::sleep(boost::posix_time::milliseconds(threadSleep)); |
511
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464 count++; |
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465 if (count < sleep) |
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466 { |
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467 continue; |
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468 } |
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469 |
2217 | 470 Logging::Flush(); |
471 | |
511
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472 boost::mutex::scoped_lock lock(that->mutex_); |
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473 |
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474 try |
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475 { |
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476 that->db_.FlushToDisk(); |
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477 } |
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478 catch (OrthancException&) |
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479 { |
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480 LOG(ERROR) << "Cannot flush the SQLite database to the disk (is your filesystem full?)"; |
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481 } |
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482 |
511
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483 count = 0; |
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484 } |
511
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485 |
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486 LOG(INFO) << "Stopping the database flushing thread"; |
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487 } |
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488 |
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489 |
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490 static bool ComputeExpectedNumberOfInstances(int64_t& target, |
433 | 491 const DicomMap& dicomSummary) |
492 { | |
493 try | |
494 { | |
656 | 495 const DicomValue* value; |
496 const DicomValue* value2; | |
497 | |
433 | 498 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGES_IN_ACQUISITION)) != NULL && |
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499 !value->IsNull() && |
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500 !value->IsBinary() && |
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501 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS)) != NULL && |
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502 !value2->IsNull() && |
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503 !value2->IsBinary()) |
433 | 504 { |
505 // Patch for series with temporal positions thanks to Will Ryder | |
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506 int64_t imagesInAcquisition = boost::lexical_cast<int64_t>(value->GetContent()); |
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507 int64_t countTemporalPositions = boost::lexical_cast<int64_t>(value2->GetContent()); |
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508 target = imagesInAcquisition * countTemporalPositions; |
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509 return (target > 0); |
433 | 510 } |
511 | |
512 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_SLICES)) != NULL && | |
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513 !value->IsNull() && |
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514 !value->IsBinary() && |
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515 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TIME_SLICES)) != NULL && |
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516 !value2->IsBinary() && |
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517 !value2->IsNull()) |
433 | 518 { |
519 // Support of Cardio-PET images | |
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520 int64_t numberOfSlices = boost::lexical_cast<int64_t>(value->GetContent()); |
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521 int64_t numberOfTimeSlices = boost::lexical_cast<int64_t>(value2->GetContent()); |
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522 target = numberOfSlices * numberOfTimeSlices; |
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523 return (target > 0); |
433 | 524 } |
525 | |
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526 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)) != NULL && |
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527 !value->IsNull() && |
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528 !value->IsBinary()) |
433 | 529 { |
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530 target = boost::lexical_cast<int64_t>(value->GetContent()); |
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531 return (target > 0); |
433 | 532 } |
533 } | |
1737
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534 catch (OrthancException&) |
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535 { |
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536 } |
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537 catch (boost::bad_lexical_cast&) |
433 | 538 { |
539 } | |
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540 |
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541 return false; |
433 | 542 } |
543 | |
544 | |
1237 | 545 |
546 | |
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547 static bool LookupStringMetadata(std::string& result, |
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548 const std::map<MetadataType, std::string>& metadata, |
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549 MetadataType type) |
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550 { |
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551 std::map<MetadataType, std::string>::const_iterator found = metadata.find(type); |
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552 |
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553 if (found == metadata.end()) |
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554 { |
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555 return false; |
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556 } |
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557 else |
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558 { |
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559 result = found->second; |
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560 return true; |
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561 } |
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562 } |
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563 |
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564 |
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565 static bool LookupIntegerMetadata(int64_t& result, |
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566 const std::map<MetadataType, std::string>& metadata, |
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567 MetadataType type) |
1237 | 568 { |
1238 | 569 std::string s; |
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570 if (!LookupStringMetadata(s, metadata, type)) |
1237 | 571 { |
572 return false; | |
573 } | |
574 | |
575 try | |
576 { | |
1238 | 577 result = boost::lexical_cast<int64_t>(s); |
1237 | 578 return true; |
579 } | |
580 catch (boost::bad_lexical_cast&) | |
581 { | |
582 return false; | |
583 } | |
584 } | |
585 | |
586 | |
1297 | 587 void ServerIndex::LogChange(int64_t internalId, |
588 ChangeType changeType, | |
589 ResourceType resourceType, | |
590 const std::string& publicId) | |
591 { | |
592 ServerIndexChange change(changeType, resourceType, publicId); | |
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593 |
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594 if (changeType <= ChangeType_INTERNAL_LastLogged) |
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595 { |
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596 db_.LogChange(internalId, change); |
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597 } |
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598 |
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599 assert(listener_.get() != NULL); |
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600 listener_->SignalChange(change); |
1297 | 601 } |
602 | |
1237 | 603 |
4554 | 604 bool ServerIndex::IsUnstableResource(int64_t id) |
605 { | |
606 return unstableResources_.Contains(id); | |
607 } | |
608 | |
1237 | 609 |
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610 ServerIndex::ServerIndex(ServerContext& context, |
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611 IDatabaseWrapper& db, |
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612 unsigned int threadSleep) : |
511
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613 done_(false), |
1247 | 614 db_(db), |
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615 maximumStorageSize_(0), |
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616 maximumPatients_(0), |
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617 mainDicomTagsRegistry_(new MainDicomTagsRegistry), |
4554 | 618 maxRetries_(10) |
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619 { |
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620 listener_.reset(new Listener(context)); |
1247 | 621 db_.SetListener(*listener_); |
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622 |
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623 // Initial recycling if the parameters have changed since the last |
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624 // execution of Orthanc |
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625 StandaloneRecycling(); |
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626 |
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627 if (db.HasFlushToDisk()) |
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628 { |
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629 flushThread_ = boost::thread(FlushThread, this, threadSleep); |
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630 } |
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631 |
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632 unstableResourcesMonitorThread_ = boost::thread |
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633 (UnstableResourcesMonitorThread, this, threadSleep); |
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634 } |
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635 |
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636 |
1453
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637 |
206
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638 ServerIndex::~ServerIndex() |
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639 { |
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640 if (!done_) |
511
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641 { |
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642 LOG(ERROR) << "INTERNAL ERROR: ServerIndex::Stop() should be invoked manually to avoid mess in the destruction order!"; |
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643 Stop(); |
511
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644 } |
0 | 645 } |
646 | |
647 | |
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648 |
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649 void ServerIndex::Stop() |
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650 { |
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651 if (!done_) |
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652 { |
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653 done_ = true; |
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654 |
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655 if (db_.HasFlushToDisk() && |
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656 flushThread_.joinable()) |
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657 { |
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658 flushThread_.join(); |
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659 } |
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660 |
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661 if (unstableResourcesMonitorThread_.joinable()) |
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662 { |
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663 unstableResourcesMonitorThread_.join(); |
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664 } |
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665 } |
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666 } |
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667 |
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668 |
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669 static void SetInstanceMetadata(ResourcesContent& content, |
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670 std::map<MetadataType, std::string>& instanceMetadata, |
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671 int64_t instance, |
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672 MetadataType metadata, |
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673 const std::string& value) |
2188 | 674 { |
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675 content.AddMetadata(instance, metadata, value); |
2188 | 676 instanceMetadata[metadata] = value; |
677 } | |
678 | |
679 | |
3080
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680 void ServerIndex::SignalNewResource(ChangeType changeType, |
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681 ResourceType level, |
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682 const std::string& publicId, |
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683 int64_t internalId) |
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684 { |
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685 ServerIndexChange change(changeType, level, publicId); |
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686 db_.LogChange(internalId, change); |
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687 |
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688 assert(listener_.get() != NULL); |
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689 listener_->SignalChange(change); |
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690 } |
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|
691 |
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|
692 |
1006
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|
693 StoreStatus ServerIndex::Store(std::map<MetadataType, std::string>& instanceMetadata, |
4505
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|
694 const DicomMap& dicomSummary, |
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695 const Attachments& attachments, |
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696 const MetadataMap& metadata, |
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697 const DicomInstanceOrigin& origin, |
4499 | 698 bool overwrite, |
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699 bool hasTransferSyntax, |
4507
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700 DicomTransferSyntax transferSyntax, |
4499 | 701 bool hasPixelDataOffset, |
702 uint64_t pixelDataOffset) | |
0 | 703 { |
206
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704 boost::mutex::scoped_lock lock(mutex_); |
0 | 705 |
3090
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706 int64_t expectedInstances; |
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707 const bool hasExpectedInstances = |
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708 ComputeExpectedNumberOfInstances(expectedInstances, dicomSummary); |
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|
709 |
1006
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|
710 instanceMetadata.clear(); |
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|
711 |
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712 DicomInstanceHasher hasher(dicomSummary); |
4505
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713 const std::string hashPatient = hasher.HashPatient(); |
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714 const std::string hashStudy = hasher.HashStudy(); |
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715 const std::string hashSeries = hasher.HashSeries(); |
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|
716 const std::string hashInstance = hasher.HashInstance(); |
3080
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|
717 |
0 | 718 try |
719 { | |
4570
648defffc8cc
new enum: TransactionType
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diff
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|
720 Transaction t(*this, TransactionType_ReadWrite); |
0 | 721 |
3080
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|
722 IDatabaseWrapper::CreateInstanceResult status; |
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|
723 int64_t instanceId; |
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|
724 |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
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2726
diff
changeset
|
725 // Check whether this instance is already stored |
3080
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|
726 if (!db_.CreateInstance(status, instanceId, hashPatient, |
3082
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|
727 hashStudy, hashSeries, hashInstance)) |
0 | 728 { |
3082
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|
729 // The instance already exists |
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|
730 |
3813
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|
731 if (overwrite) |
3082
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|
732 { |
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733 // Overwrite the old instance |
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|
734 LOG(INFO) << "Overwriting instance: " << hashInstance; |
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|
735 db_.DeleteResource(instanceId); |
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736 |
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737 // Re-create the instance, now that the old one is removed |
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|
738 if (!db_.CreateInstance(status, instanceId, hashPatient, |
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|
739 hashStudy, hashSeries, hashInstance)) |
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|
740 { |
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|
741 throw OrthancException(ErrorCode_InternalError); |
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|
742 } |
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743 } |
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|
744 else |
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|
745 { |
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|
746 // Do nothing if the instance already exists and overwriting is disabled |
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|
747 db_.GetAllMetadata(instanceMetadata, instanceId); |
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|
748 return StoreStatus_AlreadyStored; |
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|
749 } |
3080
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|
750 } |
1a75595d8e44
started refactoring of ServerIndex::Store()
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diff
changeset
|
751 |
1a75595d8e44
started refactoring of ServerIndex::Store()
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changeset
|
752 |
3090
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starting optimization of SeriesIndex::GetSeriesStatus()
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|
753 // Warn about the creation of new resources. The order must be |
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diff
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|
754 // from instance to patient. |
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|
755 |
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diff
changeset
|
756 // NB: In theory, could be sped up by grouping the underlying |
31244604f617
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changeset
|
757 // calls to "db_.LogChange()". However, this would only have an |
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|
758 // impact when new patient/study/series get created, which |
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
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diff
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|
759 // occurs far less often that creating new instances. The |
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
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changeset
|
760 // positive impact looks marginal in practice. |
3080
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started refactoring of ServerIndex::Store()
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changeset
|
761 SignalNewResource(ChangeType_NewInstance, ResourceType_Instance, hashInstance, instanceId); |
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started refactoring of ServerIndex::Store()
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|
762 |
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changeset
|
763 if (status.isNewSeries_) |
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|
764 { |
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started refactoring of ServerIndex::Store()
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changeset
|
765 SignalNewResource(ChangeType_NewSeries, ResourceType_Series, hashSeries, status.seriesId_); |
0 | 766 } |
3080
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
767 |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
768 if (status.isNewStudy_) |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
769 { |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
770 SignalNewResource(ChangeType_NewStudy, ResourceType_Study, hashStudy, status.studyId_); |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
771 } |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
772 |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
773 if (status.isNewPatient_) |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
774 { |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
775 SignalNewResource(ChangeType_NewPatient, ResourceType_Patient, hashPatient, status.patientId_); |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
776 } |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
777 |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
778 |
268
4bc02e2254ec
preparing ServerIndex for recycling
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parents:
264
diff
changeset
|
779 // Ensure there is enough room in the storage for the new instance |
4bc02e2254ec
preparing ServerIndex for recycling
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parents:
264
diff
changeset
|
780 uint64_t instanceSize = 0; |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
781 for (Attachments::const_iterator it = attachments.begin(); |
656 | 782 it != attachments.end(); ++it) |
268
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
783 { |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
784 instanceSize += it->GetCompressedSize(); |
4bc02e2254ec
preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
264
diff
changeset
|
785 } |
4bc02e2254ec
preparing ServerIndex for recycling
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parents:
264
diff
changeset
|
786 |
3080
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
787 Recycle(instanceSize, hashPatient /* don't consider the current patient for recycling */); |
3086
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grouping the setting of metadata
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parents:
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diff
changeset
|
788 |
74e3e48aa9bd
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diff
changeset
|
789 |
74e3e48aa9bd
grouping the setting of metadata
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parents:
3083
diff
changeset
|
790 // Attach the files to the newly created instance |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
791 for (Attachments::const_iterator it = attachments.begin(); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
792 it != attachments.end(); ++it) |
74e3e48aa9bd
grouping the setting of metadata
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parents:
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diff
changeset
|
793 { |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
794 db_.AddAttachment(instanceId, *it); |
74e3e48aa9bd
grouping the setting of metadata
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parents:
3083
diff
changeset
|
795 } |
3080
1a75595d8e44
started refactoring of ServerIndex::Store()
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parents:
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diff
changeset
|
796 |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
797 |
0 | 798 { |
3083
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
799 ResourcesContent content; |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
800 |
3086
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grouping the setting of metadata
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parents:
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diff
changeset
|
801 // Populate the tags of the newly-created resources |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
802 |
3083
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
803 content.AddResource(instanceId, ResourceType_Instance, dicomSummary); |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
804 |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
805 if (status.isNewSeries_) |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
806 { |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
807 content.AddResource(status.seriesId_, ResourceType_Series, dicomSummary); |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
808 } |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
809 |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
810 if (status.isNewStudy_) |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
811 { |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
812 content.AddResource(status.studyId_, ResourceType_Study, dicomSummary); |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
813 } |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
814 |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
815 if (status.isNewPatient_) |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
816 { |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
817 content.AddResource(status.patientId_, ResourceType_Patient, dicomSummary); |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
818 } |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
819 |
3086
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
820 |
74e3e48aa9bd
grouping the setting of metadata
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parents:
3083
diff
changeset
|
821 // Attach the user-specified metadata |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
822 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
823 for (MetadataMap::const_iterator |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
824 it = metadata.begin(); it != metadata.end(); ++it) |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
825 { |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
826 switch (it->first.first) |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
827 { |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
828 case ResourceType_Patient: |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
829 content.AddMetadata(status.patientId_, it->first.second, it->second); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
830 break; |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
831 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
832 case ResourceType_Study: |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
833 content.AddMetadata(status.studyId_, it->first.second, it->second); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
834 break; |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
835 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
836 case ResourceType_Series: |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
837 content.AddMetadata(status.seriesId_, it->first.second, it->second); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
838 break; |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
839 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
840 case ResourceType_Instance: |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
841 SetInstanceMetadata(content, instanceMetadata, instanceId, |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
842 it->first.second, it->second); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
843 break; |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
844 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
845 default: |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
846 throw OrthancException(ErrorCode_ParameterOutOfRange); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
847 } |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
848 } |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
849 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
850 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
851 // Attach the auto-computed metadata for the patient/study/series levels |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
852 std::string now = SystemToolbox::GetNowIsoString(true /* use UTC time (not local time) */); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
853 content.AddMetadata(status.seriesId_, MetadataType_LastUpdate, now); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
854 content.AddMetadata(status.studyId_, MetadataType_LastUpdate, now); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
855 content.AddMetadata(status.patientId_, MetadataType_LastUpdate, now); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
856 |
4460
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
857 if (status.isNewSeries_) |
3090
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3087
diff
changeset
|
858 { |
4460
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
859 if (hasExpectedInstances) |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
860 { |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
861 content.AddMetadata(status.seriesId_, MetadataType_Series_ExpectedNumberOfInstances, |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
862 boost::lexical_cast<std::string>(expectedInstances)); |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
863 } |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
864 |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
865 // New in Orthanc 1.9.0 |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
866 content.AddMetadata(status.seriesId_, MetadataType_RemoteAet, |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
867 origin.GetRemoteAetC()); |
3090
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3087
diff
changeset
|
868 } |
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3087
diff
changeset
|
869 |
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3087
diff
changeset
|
870 |
3086
74e3e48aa9bd
grouping the setting of metadata
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parents:
3083
diff
changeset
|
871 // Attach the auto-computed metadata for the instance level, |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
872 // reflecting these additions into the input metadata map |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
873 SetInstanceMetadata(content, instanceMetadata, instanceId, |
74e3e48aa9bd
grouping the setting of metadata
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parents:
3083
diff
changeset
|
874 MetadataType_Instance_ReceptionDate, now); |
4460
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
875 SetInstanceMetadata(content, instanceMetadata, instanceId, MetadataType_RemoteAet, |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
876 origin.GetRemoteAetC()); |
3086
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grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
877 SetInstanceMetadata(content, instanceMetadata, instanceId, MetadataType_Instance_Origin, |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
878 EnumerationToString(origin.GetRequestOrigin())); |
ac69c9f76c71
refactoring ServerIndex::Store()
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parents:
4505
diff
changeset
|
879 |
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
880 |
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
881 if (hasTransferSyntax) |
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
882 { |
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
883 // New in Orthanc 1.2.0 |
ac69c9f76c71
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parents:
4505
diff
changeset
|
884 SetInstanceMetadata(content, instanceMetadata, instanceId, |
4507
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widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4506
diff
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|
885 MetadataType_Instance_TransferSyntax, |
b4c58795f3a8
widening the use of DicomTransferSyntax enum
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parents:
4506
diff
changeset
|
886 GetTransferSyntaxUid(transferSyntax)); |
4506
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refactoring ServerIndex::Store()
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parents:
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diff
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|
887 } |
3086
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parents:
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diff
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|
888 |
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diff
changeset
|
889 { |
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parents:
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diff
changeset
|
890 std::string s; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
891 |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
892 if (origin.LookupRemoteIp(s)) |
3086
74e3e48aa9bd
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
893 { |
74e3e48aa9bd
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diff
changeset
|
894 // New in Orthanc 1.4.0 |
74e3e48aa9bd
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
895 SetInstanceMetadata(content, instanceMetadata, instanceId, |
74e3e48aa9bd
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
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|
896 MetadataType_Instance_RemoteIp, s); |
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parents:
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diff
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|
897 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
898 |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
899 if (origin.LookupCalledAet(s)) |
3086
74e3e48aa9bd
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
900 { |
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parents:
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diff
changeset
|
901 // New in Orthanc 1.4.0 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
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|
902 SetInstanceMetadata(content, instanceMetadata, instanceId, |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
903 MetadataType_Instance_CalledAet, s); |
74e3e48aa9bd
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
904 } |
74e3e48aa9bd
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
905 |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
906 if (origin.LookupHttpUsername(s)) |
3086
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
907 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
908 // New in Orthanc 1.4.0 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
909 SetInstanceMetadata(content, instanceMetadata, instanceId, |
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grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
910 MetadataType_Instance_HttpUsername, s); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
911 } |
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parents:
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|
912 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
913 |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
914 if (hasPixelDataOffset) |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
915 { |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
916 // New in Orthanc 1.9.1 |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
917 SetInstanceMetadata(content, instanceMetadata, instanceId, |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
918 MetadataType_Instance_PixelDataOffset, |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
919 boost::lexical_cast<std::string>(pixelDataOffset)); |
5b929e6b3c36
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
920 } |
3086
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diff
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|
921 |
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parents:
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diff
changeset
|
922 const DicomValue* value; |
74e3e48aa9bd
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parents:
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diff
changeset
|
923 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_SOP_CLASS_UID)) != NULL && |
74e3e48aa9bd
grouping the setting of metadata
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parents:
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diff
changeset
|
924 !value->IsNull() && |
74e3e48aa9bd
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
925 !value->IsBinary()) |
74e3e48aa9bd
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
926 { |
74e3e48aa9bd
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
927 SetInstanceMetadata(content, instanceMetadata, instanceId, |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
928 MetadataType_Instance_SopClassUid, value->GetContent()); |
74e3e48aa9bd
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
929 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
930 |
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changeset
|
931 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
932 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_INSTANCE_NUMBER)) != NULL || |
74e3e48aa9bd
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parents:
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|
933 (value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGE_INDEX)) != NULL) |
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|
934 { |
74e3e48aa9bd
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changeset
|
935 if (!value->IsNull() && |
74e3e48aa9bd
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parents:
3083
diff
changeset
|
936 !value->IsBinary()) |
74e3e48aa9bd
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parents:
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diff
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|
937 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
938 SetInstanceMetadata(content, instanceMetadata, instanceId, |
4263
61a2bedbae80
sanitize IndexInSeries (we've seen spaces there !)
Alain Mazy <alain@mazy.be>
parents:
4205
diff
changeset
|
939 MetadataType_Instance_IndexInSeries, Toolbox::StripSpaces(value->GetContent())); |
3086
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|
940 } |
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|
941 } |
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|
942 |
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changeset
|
943 |
3083
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
944 db_.SetResourcesContent(content); |
3080
1a75595d8e44
started refactoring of ServerIndex::Store()
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parents:
3075
diff
changeset
|
945 } |
3086
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|
946 |
3090
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starting optimization of SeriesIndex::GetSeriesStatus()
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diff
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|
947 |
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starting optimization of SeriesIndex::GetSeriesStatus()
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parents:
3087
diff
changeset
|
948 // Check whether the series of this new instance is now completed |
3187
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parents:
3174
diff
changeset
|
949 int64_t expectedNumberOfInstances; |
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diff
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|
950 if (ComputeExpectedNumberOfInstances(expectedNumberOfInstances, dicomSummary)) |
205
6ab754744446
logging of completed series
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diff
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|
951 { |
4554 | 952 SeriesStatus seriesStatus = GetSeriesStatus(db_, status.seriesId_, expectedNumberOfInstances); |
3187
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diff
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|
953 if (seriesStatus == SeriesStatus_Complete) |
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diff
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|
954 { |
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diff
changeset
|
955 LogChange(status.seriesId_, ChangeType_CompletedSeries, ResourceType_Series, hashSeries); |
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refactoring retrieval of metadata from database
Sebastien Jodogne <s.jodogne@gmail.com>
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|
956 } |
205
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|
957 } |
3087 | 958 |
205
6ab754744446
logging of completed series
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|
959 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
960 // Mark the parent resources of this instance as unstable |
3080
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
961 MarkAsUnstable(status.seriesId_, ResourceType_Series, hashSeries); |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
962 MarkAsUnstable(status.studyId_, ResourceType_Study, hashStudy); |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
963 MarkAsUnstable(status.patientId_, ResourceType_Patient, hashPatient); |
511
3b735fdf320b
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|
964 |
278
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more efficient determination of storage size for recycling
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273
diff
changeset
|
965 t.Commit(instanceSize); |
268
4bc02e2254ec
preparing ServerIndex for recycling
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264
diff
changeset
|
966 |
0 | 967 return StoreStatus_Success; |
968 } | |
62 | 969 catch (OrthancException& e) |
0 | 970 { |
1247 | 971 LOG(ERROR) << "EXCEPTION [" << e.What() << "]"; |
0 | 972 } |
973 | |
974 return StoreStatus_Failure; | |
975 } | |
976 | |
977 | |
4554 | 978 SeriesStatus ServerIndex::GetSeriesStatus(IDatabaseWrapper& db, |
979 int64_t id, | |
3090
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starting optimization of SeriesIndex::GetSeriesStatus()
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3087
diff
changeset
|
980 int64_t expectedNumberOfInstances) |
199 | 981 { |
3091
476cba12c2b0
IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3090
diff
changeset
|
982 std::list<std::string> values; |
4554 | 983 db.GetChildrenMetadata(values, id, MetadataType_Instance_IndexInSeries); |
199 | 984 |
1238 | 985 std::set<int64_t> instances; |
3091
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IDatabaseWrapper::GetChildrenMetadata()
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changeset
|
986 |
476cba12c2b0
IDatabaseWrapper::GetChildrenMetadata()
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parents:
3090
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changeset
|
987 for (std::list<std::string>::const_iterator |
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IDatabaseWrapper::GetChildrenMetadata()
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diff
changeset
|
988 it = values.begin(); it != values.end(); ++it) |
199 | 989 { |
1238 | 990 int64_t index; |
3091
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IDatabaseWrapper::GetChildrenMetadata()
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diff
changeset
|
991 |
476cba12c2b0
IDatabaseWrapper::GetChildrenMetadata()
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diff
changeset
|
992 try |
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IDatabaseWrapper::GetChildrenMetadata()
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parents:
3090
diff
changeset
|
993 { |
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IDatabaseWrapper::GetChildrenMetadata()
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3090
diff
changeset
|
994 index = boost::lexical_cast<int64_t>(*it); |
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IDatabaseWrapper::GetChildrenMetadata()
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changeset
|
995 } |
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IDatabaseWrapper::GetChildrenMetadata()
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diff
changeset
|
996 catch (boost::bad_lexical_cast&) |
199 | 997 { |
998 return SeriesStatus_Unknown; | |
999 } | |
3091
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IDatabaseWrapper::GetChildrenMetadata()
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diff
changeset
|
1000 |
3090
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starting optimization of SeriesIndex::GetSeriesStatus()
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changeset
|
1001 if (!(index > 0 && index <= expectedNumberOfInstances)) |
199 | 1002 { |
1003 // Out-of-range instance index | |
1004 return SeriesStatus_Inconsistent; | |
1005 } | |
1006 | |
1007 if (instances.find(index) != instances.end()) | |
1008 { | |
1009 // Twice the same instance index | |
1010 return SeriesStatus_Inconsistent; | |
1011 } | |
1012 | |
1013 instances.insert(index); | |
1014 } | |
1015 | |
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starting optimization of SeriesIndex::GetSeriesStatus()
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changeset
|
1016 if (static_cast<int64_t>(instances.size()) == expectedNumberOfInstances) |
199 | 1017 { |
1018 return SeriesStatus_Complete; | |
1019 } | |
1020 else | |
1021 { | |
1022 return SeriesStatus_Missing; | |
1023 } | |
1024 } | |
1025 | |
1026 | |
202 | 1027 void ServerIndex::MainDicomTagsToJson(Json::Value& target, |
4554 | 1028 IDatabaseWrapper& db, |
1668
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diff
changeset
|
1029 int64_t resourceId, |
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reconstructing main dicom tags
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|
1030 ResourceType resourceType) |
198
663cc6c46d0a
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|
1031 { |
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|
1032 DicomMap tags; |
4554 | 1033 db.GetMainDicomTags(tags, resourceId); |
1676
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diff
changeset
|
1034 |
f079f3efe33b
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diff
changeset
|
1035 if (resourceType == ResourceType_Study) |
f079f3efe33b
patient tags reported in studies
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diff
changeset
|
1036 { |
f079f3efe33b
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diff
changeset
|
1037 DicomMap t1, t2; |
f079f3efe33b
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diff
changeset
|
1038 tags.ExtractStudyInformation(t1); |
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1039 tags.ExtractPatientInformation(t2); |
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1040 |
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1041 target["MainDicomTags"] = Json::objectValue; |
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1042 FromDcmtkBridge::ToJson(target["MainDicomTags"], t1, true); |
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1043 |
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1044 target["PatientMainDicomTags"] = Json::objectValue; |
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1045 FromDcmtkBridge::ToJson(target["PatientMainDicomTags"], t2, true); |
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1046 } |
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1047 else |
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1048 { |
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1049 target["MainDicomTags"] = Json::objectValue; |
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1050 FromDcmtkBridge::ToJson(target["MainDicomTags"], tags, true); |
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1051 } |
198
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1052 } |
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1053 |
3090
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1054 |
1244 | 1055 template <typename T> |
1056 static void FormatLog(Json::Value& target, | |
1057 const std::list<T>& log, | |
1058 const std::string& name, | |
1059 bool done, | |
3105
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1060 int64_t since, |
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1061 bool hasLast, |
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1062 int64_t last) |
1240 | 1063 { |
1064 Json::Value items = Json::arrayValue; | |
1244 | 1065 for (typename std::list<T>::const_iterator |
1304 | 1066 it = log.begin(); it != log.end(); ++it) |
1240 | 1067 { |
1068 Json::Value item; | |
1069 it->Format(item); | |
1070 items.append(item); | |
1071 } | |
1072 | |
1073 target = Json::objectValue; | |
1244 | 1074 target[name] = items; |
1240 | 1075 target["Done"] = done; |
1076 | |
3105
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1077 if (!hasLast) |
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1078 { |
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1079 // Best-effort guess of the last index in the sequence |
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1080 if (log.empty()) |
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1081 { |
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1082 last = since; |
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1083 } |
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1084 else |
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1085 { |
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1086 last = log.back().GetSeq(); |
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1087 } |
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1088 } |
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1089 |
1240 | 1090 target["Last"] = static_cast<int>(last); |
1091 } | |
1092 | |
1093 | |
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1094 bool ServerIndex::IsRecyclingNeeded(uint64_t instanceSize) |
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1095 { |
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1096 if (maximumStorageSize_ != 0) |
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1097 { |
3020
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1098 assert(maximumStorageSize_ >= instanceSize); |
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1099 |
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1100 if (db_.IsDiskSizeAbove(maximumStorageSize_ - instanceSize)) |
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1101 { |
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1102 return true; |
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1103 } |
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1104 } |
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1105 |
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1106 if (maximumPatients_ != 0) |
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1107 { |
1247 | 1108 uint64_t patientCount = db_.GetResourceCount(ResourceType_Patient); |
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1109 if (patientCount > maximumPatients_) |
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1110 { |
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1111 return true; |
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1112 } |
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1113 } |
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1114 |
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1115 return false; |
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1116 } |
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1117 |
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1118 |
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1119 void ServerIndex::Recycle(uint64_t instanceSize, |
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1120 const std::string& newPatientId) |
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1121 { |
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1122 if (!IsRecyclingNeeded(instanceSize)) |
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1123 { |
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1124 return; |
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1125 } |
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1126 |
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1127 // Check whether other DICOM instances from this patient are |
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1128 // already stored |
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1129 int64_t patientToAvoid; |
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1130 ResourceType type; |
1294 | 1131 bool hasPatientToAvoid = db_.LookupResource(patientToAvoid, type, newPatientId); |
268
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1132 |
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1133 if (hasPatientToAvoid && type != ResourceType_Patient) |
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1134 { |
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1135 throw OrthancException(ErrorCode_InternalError); |
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1136 } |
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1137 |
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1138 // Iteratively select patient to remove until there is enough |
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1139 // space in the DICOM store |
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1140 int64_t patientToRecycle; |
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1141 while (true) |
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1142 { |
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1143 // If other instances of this patient are already in the store, |
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1144 // we must avoid to recycle them |
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1145 bool ok = hasPatientToAvoid ? |
1247 | 1146 db_.SelectPatientToRecycle(patientToRecycle, patientToAvoid) : |
1147 db_.SelectPatientToRecycle(patientToRecycle); | |
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1148 |
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1149 if (!ok) |
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1150 { |
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1151 throw OrthancException(ErrorCode_FullStorage); |
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1152 } |
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1153 |
4268
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1154 LOG(TRACE) << "Recycling one patient"; |
1247 | 1155 db_.DeleteResource(patientToRecycle); |
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1156 |
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1157 if (!IsRecyclingNeeded(instanceSize)) |
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1158 { |
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1159 // OK, we're done |
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1160 break; |
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1161 } |
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1162 } |
268
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1163 } |
269
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1164 |
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1165 void ServerIndex::SetMaximumPatientCount(unsigned int count) |
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1166 { |
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1167 boost::mutex::scoped_lock lock(mutex_); |
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1168 maximumPatients_ = count; |
270
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1169 |
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1170 if (count == 0) |
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1171 { |
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1172 LOG(WARNING) << "No limit on the number of stored patients"; |
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1173 } |
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1174 else |
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1175 { |
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1176 LOG(WARNING) << "At most " << count << " patients will be stored"; |
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1177 } |
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1178 |
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1179 StandaloneRecycling(); |
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1180 } |
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1181 |
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1182 void ServerIndex::SetMaximumStorageSize(uint64_t size) |
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1183 { |
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1184 boost::mutex::scoped_lock lock(mutex_); |
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1185 maximumStorageSize_ = size; |
270
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1186 |
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1187 if (size == 0) |
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1188 { |
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1189 LOG(WARNING) << "No limit on the size of the storage area"; |
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1190 } |
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1191 else |
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1192 { |
440
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1193 LOG(WARNING) << "At most " << (size / MEGA_BYTES) << "MB will be used for the storage area"; |
270
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1194 } |
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1195 |
269
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1196 StandaloneRecycling(); |
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1197 } |
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1198 |
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New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
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1199 |
272
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1200 void ServerIndex::StandaloneRecycling() |
269
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1201 { |
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1202 // WARNING: No mutex here, do not include this as a public method |
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1203 Transaction t(*this, TransactionType_ReadWrite); |
269
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1204 Recycle(0, ""); |
278
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1205 t.Commit(0); |
269
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1206 } |
272
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1207 |
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1208 |
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1209 void ServerIndex::UnstableResourcesMonitorThread(ServerIndex* that, |
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1210 unsigned int threadSleep) |
511
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1211 { |
2940
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1212 int stableAge; |
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1213 |
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1214 { |
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1215 OrthancConfiguration::ReaderLock lock; |
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1216 stableAge = lock.GetConfiguration().GetUnsignedIntegerParameter("StableAge", 60); |
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1217 } |
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1218 |
511
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1219 if (stableAge <= 0) |
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1220 { |
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1221 stableAge = 60; |
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1222 } |
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1223 |
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1224 LOG(INFO) << "Starting the monitor for stable resources (stable age = " << stableAge << ")"; |
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1225 |
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1226 while (!that->done_) |
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1227 { |
2665
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1228 // Check for stable resources each few seconds |
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1229 boost::this_thread::sleep(boost::posix_time::milliseconds(threadSleep)); |
511
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1230 |
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1231 boost::mutex::scoped_lock lock(that->mutex_); |
513 | 1232 |
511
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1233 while (!that->unstableResources_.IsEmpty() && |
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1234 that->unstableResources_.GetOldestPayload().GetAge() > static_cast<unsigned int>(stableAge)) |
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1235 { |
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1236 // This DICOM resource has not received any new instance for |
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1237 // some time. It can be considered as stable. |
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1238 |
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1239 UnstableResourcePayload payload; |
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1240 int64_t id = that->unstableResources_.RemoveOldest(payload); |
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1241 |
513 | 1242 // Ensure that the resource is still existing before logging the change |
1247 | 1243 if (that->db_.IsExistingResource(id)) |
511
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1244 { |
1177
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1245 switch (payload.GetResourceType()) |
513 | 1246 { |
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1247 case ResourceType_Patient: |
1237 | 1248 that->LogChange(id, ChangeType_StablePatient, ResourceType_Patient, payload.GetPublicId()); |
513 | 1249 break; |
511
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1250 |
1177
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1251 case ResourceType_Study: |
1237 | 1252 that->LogChange(id, ChangeType_StableStudy, ResourceType_Study, payload.GetPublicId()); |
513 | 1253 break; |
511
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1254 |
1177
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1255 case ResourceType_Series: |
1237 | 1256 that->LogChange(id, ChangeType_StableSeries, ResourceType_Series, payload.GetPublicId()); |
513 | 1257 break; |
1258 | |
1259 default: | |
1260 throw OrthancException(ErrorCode_InternalError); | |
1261 } | |
1262 | |
1263 //LOG(INFO) << "Stable resource: " << EnumerationToString(payload.type_) << " " << id; | |
511
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1264 } |
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1265 } |
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1266 } |
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1267 |
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1268 LOG(INFO) << "Closing the monitor thread for stable resources"; |
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1269 } |
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1270 |
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1271 |
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|
1272 void ServerIndex::MarkAsUnstable(int64_t id, |
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1273 Orthanc::ResourceType type, |
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|
1274 const std::string& publicId) |
511
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1275 { |
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1276 // WARNING: Before calling this method, "mutex_" must be locked. |
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1277 |
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1278 assert(type == Orthanc::ResourceType_Patient || |
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|
1279 type == Orthanc::ResourceType_Study || |
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1280 type == Orthanc::ResourceType_Series); |
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1281 |
1177
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|
1282 UnstableResourcePayload payload(type, publicId); |
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1283 unstableResources_.AddOrMakeMostRecent(id, payload); |
511
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|
1284 //LOG(INFO) << "Unstable resource: " << EnumerationToString(type) << " " << id; |
1189
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NewChildInstance change type
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|
1285 |
1237 | 1286 LogChange(id, ChangeType_NewChildInstance, type, publicId); |
511
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1287 } |
521 | 1288 |
1289 | |
1290 | |
699
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|
1291 StoreStatus ServerIndex::AddAttachment(const FileInfo& attachment, |
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|
1292 const std::string& publicId) |
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|
1293 { |
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|
1294 boost::mutex::scoped_lock lock(mutex_); |
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1295 |
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|
1296 Transaction t(*this, TransactionType_ReadWrite); |
699
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|
1297 |
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|
1298 ResourceType resourceType; |
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|
1299 int64_t resourceId; |
1294 | 1300 if (!db_.LookupResource(resourceId, resourceType, publicId)) |
699
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|
1301 { |
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|
1302 return StoreStatus_Failure; // Inexistent resource |
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1303 } |
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1304 |
704
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|
1305 // Remove possible previous attachment |
1247 | 1306 db_.DeleteAttachment(resourceId, attachment.GetContentType()); |
699
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1307 |
704
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|
1308 // Locate the patient of the target resource |
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|
1309 int64_t patientId = resourceId; |
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|
1310 for (;;) |
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|
1311 { |
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|
1312 int64_t parent; |
1247 | 1313 if (db_.LookupParent(parent, patientId)) |
704
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|
1314 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1315 // We have not reached the patient level yet |
4789da60d655
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|
1316 patientId = parent; |
4789da60d655
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diff
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|
1317 } |
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diff
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|
1318 else |
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|
1319 { |
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diff
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|
1320 // We have reached the patient level |
4789da60d655
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diff
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|
1321 break; |
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|
1322 } |
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|
1323 } |
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|
1324 |
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diff
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|
1325 // Possibly apply the recycling mechanism while preserving this patient |
1247 | 1326 assert(db_.GetResourceType(patientId) == ResourceType_Patient); |
1327 Recycle(attachment.GetCompressedSize(), db_.GetPublicId(patientId)); | |
704
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1328 |
1247 | 1329 db_.AddAttachment(resourceId, attachment); |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1330 |
1773
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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1757
diff
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|
1331 if (IsUserContentType(attachment.GetContentType())) |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1332 { |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1333 LogChange(resourceId, ChangeType_UpdatedAttachment, resourceType, publicId); |
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1334 } |
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New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1335 |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
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697
diff
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|
1336 t.Commit(attachment.GetCompressedSize()); |
2929e17f8447
add attachments to resources
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diff
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|
1337 |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1338 return StoreStatus_Success; |
2929e17f8447
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1339 } |
2929e17f8447
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1340 |
702
7592a48e97e4
delete custom attachment
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diff
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|
1341 |
4205 | 1342 void ServerIndex::ReconstructInstance(const ParsedDicomFile& dicom) |
2209
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Sebastien Jodogne <s.jodogne@gmail.com>
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1343 { |
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|
1344 DicomMap summary; |
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1345 OrthancConfiguration::DefaultExtractDicomSummary(summary, dicom); |
2209
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|
1346 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1347 DicomInstanceHasher hasher(summary); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1348 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1349 boost::mutex::scoped_lock lock(mutex_); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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1350 |
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|
1351 try |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1352 { |
4570
648defffc8cc
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1353 Transaction t(*this, TransactionType_ReadWrite); |
2209
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|
1354 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1355 int64_t patient = -1, study = -1, series = -1, instance = -1; |
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|
1356 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1357 ResourceType dummy; |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1358 if (!db_.LookupResource(patient, dummy, hasher.HashPatient()) || |
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|
1359 !db_.LookupResource(study, dummy, hasher.HashStudy()) || |
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|
1360 !db_.LookupResource(series, dummy, hasher.HashSeries()) || |
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|
1361 !db_.LookupResource(instance, dummy, hasher.HashInstance()) || |
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|
1362 patient == -1 || |
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1363 study == -1 || |
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1364 series == -1 || |
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1365 instance == -1) |
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|
1366 { |
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|
1367 throw OrthancException(ErrorCode_InternalError); |
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|
1368 } |
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|
1369 |
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1370 db_.ClearMainDicomTags(patient); |
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1371 db_.ClearMainDicomTags(study); |
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1372 db_.ClearMainDicomTags(series); |
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1373 db_.ClearMainDicomTags(instance); |
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1374 |
3083
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IDatabaseWrapper::SetResourcesContent
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|
1375 { |
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IDatabaseWrapper::SetResourcesContent
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|
1376 ResourcesContent content; |
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IDatabaseWrapper::SetResourcesContent
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|
1377 content.AddResource(patient, ResourceType_Patient, summary); |
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IDatabaseWrapper::SetResourcesContent
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1378 content.AddResource(study, ResourceType_Study, summary); |
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IDatabaseWrapper::SetResourcesContent
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1379 content.AddResource(series, ResourceType_Series, summary); |
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IDatabaseWrapper::SetResourcesContent
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|
1380 content.AddResource(instance, ResourceType_Instance, summary); |
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IDatabaseWrapper::SetResourcesContent
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|
1381 db_.SetResourcesContent(content); |
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1382 } |
2209
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1383 |
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1384 { |
4507
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4506
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|
1385 DicomTransferSyntax s; |
2209
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1386 if (dicom.LookupTransferSyntax(s)) |
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1387 { |
4507
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|
1388 db_.SetMetadata(instance, MetadataType_Instance_TransferSyntax, GetTransferSyntaxUid(s)); |
2209
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1389 } |
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1390 } |
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1391 |
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1392 const DicomValue* value; |
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1393 if ((value = summary.TestAndGetValue(DICOM_TAG_SOP_CLASS_UID)) != NULL && |
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1394 !value->IsNull() && |
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1395 !value->IsBinary()) |
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1396 { |
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1397 db_.SetMetadata(instance, MetadataType_Instance_SopClassUid, value->GetContent()); |
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1398 } |
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1399 |
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1400 t.Commit(0); // No change in the DB size |
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1401 } |
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1402 catch (OrthancException& e) |
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1403 { |
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1404 LOG(ERROR) << "EXCEPTION [" << e.What() << "]"; |
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1405 } |
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1406 } |
3025
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preparing to speed up find in databases
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diff
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|
1407 |
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diff
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|
1408 |
3029
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3027
diff
changeset
|
1409 void ServerIndex::NormalizeLookup(std::vector<DatabaseConstraint>& target, |
3027 | 1410 const DatabaseLookup& source, |
1411 ResourceType queryLevel) const | |
1412 { | |
1413 assert(mainDicomTagsRegistry_.get() != NULL); | |
3029
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1414 |
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1415 target.clear(); |
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|
1416 target.reserve(source.GetConstraintsCount()); |
3031 | 1417 |
3027 | 1418 for (size_t i = 0; i < source.GetConstraintsCount(); i++) |
1419 { | |
3031 | 1420 ResourceType level; |
1421 DicomTagType type; | |
3027 | 1422 |
3031 | 1423 mainDicomTagsRegistry_->LookupTag(level, type, source.GetConstraint(i).GetTag()); |
1424 | |
1425 if (type == DicomTagType_Identifier || | |
1426 type == DicomTagType_Main) | |
3027 | 1427 { |
3029
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|
1428 // Use the fact that patient-level tags are copied at the study level |
3031 | 1429 if (level == ResourceType_Patient && |
1430 queryLevel != ResourceType_Patient) | |
3027 | 1431 { |
3031 | 1432 level = ResourceType_Study; |
3027 | 1433 } |
3029
ea653ec47f31
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1434 |
3073
0e9d1731b1b0
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3061
diff
changeset
|
1435 target.push_back(source.GetConstraint(i).ConvertToDatabaseConstraint(level, type)); |
3027 | 1436 } |
1437 } | |
1438 } | |
1439 | |
1440 | |
4551
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1441 |
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|
1442 |
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|
1443 |
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|
1444 /*** |
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1445 ** PROTOTYPING FOR DB REFACTORING BELOW |
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1446 ***/ |
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1447 |
4557
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1448 namespace |
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1449 { |
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1450 /** |
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1451 * Some handy templates to reduce the verbosity in the definitions |
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1452 * of the internal classes. |
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1453 **/ |
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1454 |
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1455 template <typename Operations, |
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1456 typename Tuple> |
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1457 class TupleOperationsWrapper : public ServerIndex::IReadOnlyOperations |
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1458 { |
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1459 protected: |
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1460 Operations& operations_; |
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1461 const Tuple& tuple_; |
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1462 |
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1463 public: |
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1464 TupleOperationsWrapper(Operations& operations, |
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1465 const Tuple& tuple) : |
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1466 operations_(operations), |
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1467 tuple_(tuple) |
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1468 { |
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1469 } |
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1470 |
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1471 virtual void Apply(ServerIndex::ReadOnlyTransaction& transaction) ORTHANC_OVERRIDE |
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1472 { |
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1473 operations_.ApplyTuple(transaction, tuple_); |
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1474 } |
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1475 }; |
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1476 |
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1477 |
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1478 template <typename T1> |
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1479 class ReadOnlyOperationsT1 : public boost::noncopyable |
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1480 { |
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1481 public: |
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1482 typedef typename boost::tuple<T1> Tuple; |
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1483 |
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1484 virtual ~ReadOnlyOperationsT1() |
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1485 { |
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1486 } |
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1487 |
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1488 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, |
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1489 const Tuple& tuple) = 0; |
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1490 |
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1491 void Apply(ServerIndex& index, |
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1492 T1 t1) |
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1493 { |
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1494 const Tuple tuple(t1); |
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1495 TupleOperationsWrapper<ReadOnlyOperationsT1, Tuple> wrapper(*this, tuple); |
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1496 index.Apply(wrapper); |
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1497 } |
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1498 }; |
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1499 |
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1500 |
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1501 template <typename T1, |
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1502 typename T2> |
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1503 class ReadOnlyOperationsT2 : public boost::noncopyable |
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1504 { |
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1505 public: |
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1506 typedef typename boost::tuple<T1, T2> Tuple; |
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1507 |
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1508 virtual ~ReadOnlyOperationsT2() |
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1509 { |
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1510 } |
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1511 |
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1512 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, |
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1513 const Tuple& tuple) = 0; |
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1514 |
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1515 void Apply(ServerIndex& index, |
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1516 T1 t1, |
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1517 T2 t2) |
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1518 { |
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1519 const Tuple tuple(t1, t2); |
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1520 TupleOperationsWrapper<ReadOnlyOperationsT2, Tuple> wrapper(*this, tuple); |
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1521 index.Apply(wrapper); |
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1522 } |
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1523 }; |
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1524 |
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1525 |
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1526 template <typename T1, |
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1527 typename T2, |
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1528 typename T3> |
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1529 class ReadOnlyOperationsT3 : public boost::noncopyable |
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1530 { |
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1531 public: |
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1532 typedef typename boost::tuple<T1, T2, T3> Tuple; |
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1533 |
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1534 virtual ~ReadOnlyOperationsT3() |
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1535 { |
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1536 } |
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1537 |
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1538 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, |
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1539 const Tuple& tuple) = 0; |
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1540 |
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1541 void Apply(ServerIndex& index, |
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1542 T1 t1, |
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1543 T2 t2, |
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1544 T3 t3) |
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1545 { |
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1546 const Tuple tuple(t1, t2, t3); |
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1547 TupleOperationsWrapper<ReadOnlyOperationsT3, Tuple> wrapper(*this, tuple); |
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1548 index.Apply(wrapper); |
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1549 } |
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1550 }; |
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1551 |
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1552 |
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1553 template <typename T1, |
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1554 typename T2, |
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1555 typename T3, |
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1556 typename T4> |
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1557 class ReadOnlyOperationsT4 : public boost::noncopyable |
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1558 { |
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1559 public: |
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1560 typedef typename boost::tuple<T1, T2, T3, T4> Tuple; |
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parents:
4556
diff
changeset
|
1561 |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
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parents:
4556
diff
changeset
|
1562 virtual ~ReadOnlyOperationsT4() |
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templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1563 { |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1564 } |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1565 |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1566 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1567 const Tuple& tuple) = 0; |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1568 |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1569 void Apply(ServerIndex& index, |
4566
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1570 T1 t1, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1571 T2 t2, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1572 T3 t3, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1573 T4 t4) |
4557
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1574 { |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1575 const Tuple tuple(t1, t2, t3, t4); |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1576 TupleOperationsWrapper<ReadOnlyOperationsT4, Tuple> wrapper(*this, tuple); |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1577 index.Apply(wrapper); |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1578 } |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1579 }; |
4558 | 1580 |
1581 | |
1582 template <typename T1, | |
1583 typename T2, | |
1584 typename T3, | |
1585 typename T4, | |
1586 typename T5> | |
1587 class ReadOnlyOperationsT5 : public boost::noncopyable | |
1588 { | |
1589 public: | |
1590 typedef typename boost::tuple<T1, T2, T3, T4, T5> Tuple; | |
1591 | |
1592 virtual ~ReadOnlyOperationsT5() | |
1593 { | |
1594 } | |
1595 | |
1596 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, | |
1597 const Tuple& tuple) = 0; | |
1598 | |
1599 void Apply(ServerIndex& index, | |
4566
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
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4565
diff
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|
1600 T1 t1, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1601 T2 t2, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1602 T3 t3, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1603 T4 t4, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1604 T5 t5) |
4558 | 1605 { |
1606 const Tuple tuple(t1, t2, t3, t4, t5); | |
1607 TupleOperationsWrapper<ReadOnlyOperationsT5, Tuple> wrapper(*this, tuple); | |
1608 index.Apply(wrapper); | |
1609 } | |
1610 }; | |
1611 | |
1612 | |
1613 template <typename T1, | |
1614 typename T2, | |
1615 typename T3, | |
1616 typename T4, | |
1617 typename T5, | |
1618 typename T6> | |
1619 class ReadOnlyOperationsT6 : public boost::noncopyable | |
1620 { | |
1621 public: | |
1622 typedef typename boost::tuple<T1, T2, T3, T4, T5, T6> Tuple; | |
1623 | |
1624 virtual ~ReadOnlyOperationsT6() | |
1625 { | |
1626 } | |
1627 | |
1628 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, | |
1629 const Tuple& tuple) = 0; | |
1630 | |
1631 void Apply(ServerIndex& index, | |
4566
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1632 T1 t1, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1633 T2 t2, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1634 T3 t3, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1635 T4 t4, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1636 T5 t5, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1637 T6 t6) |
4558 | 1638 { |
1639 const Tuple tuple(t1, t2, t3, t4, t5, t6); | |
1640 TupleOperationsWrapper<ReadOnlyOperationsT6, Tuple> wrapper(*this, tuple); | |
1641 index.Apply(wrapper); | |
1642 } | |
1643 }; | |
4557
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1644 } |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1645 |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1646 |
4551
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1647 void ServerIndex::ApplyInternal(IReadOnlyOperations* readOperations, |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1648 IReadWriteOperations* writeOperations) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1649 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1650 if ((readOperations == NULL && writeOperations == NULL) || |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1651 (readOperations != NULL && writeOperations != NULL)) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1652 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1653 throw OrthancException(ErrorCode_InternalError); |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1654 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1655 |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1656 unsigned int count = 0; |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1657 |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1658 for (;;) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1659 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1660 try |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1661 { |
4554 | 1662 boost::mutex::scoped_lock lock(mutex_); // TODO - REMOVE |
1663 | |
4551
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1664 if (readOperations != NULL) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1665 { |
4570
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1666 /** |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1667 * IMPORTANT: In Orthanc <= 1.9.1, there was no transaction |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1668 * in this case. This was OK because of the presence of the |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1669 * global mutex protecting the database. |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1670 **/ |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1671 |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1672 Transaction transaction(*this, TransactionType_ReadOnly); // TODO - Only if not "TransactionType_Implicit" |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1673 { |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1674 ReadOnlyTransaction t(db_); |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1675 readOperations->Apply(t); |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1676 } |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1677 transaction.Commit(0); |
4551
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1678 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1679 else |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1680 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1681 assert(writeOperations != NULL); |
4570
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1682 |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1683 Transaction transaction(*this, TransactionType_ReadWrite); |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1684 { |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1685 ReadWriteTransaction t(db_, *this); |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1686 writeOperations->Apply(t, *listener_); |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1687 } |
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
1688 transaction.Commit(0); |
4551
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1689 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1690 |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1691 return; // Success |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1692 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1693 catch (OrthancException& e) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1694 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1695 if (e.GetErrorCode() == ErrorCode_DatabaseCannotSerialize) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1696 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1697 if (count == maxRetries_) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1698 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1699 throw; |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1700 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1701 else |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1702 { |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1703 count++; |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1704 boost::this_thread::sleep(boost::posix_time::milliseconds(100 * count)); |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4514
diff
changeset
|
1705 } |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1706 } |
350a22c094f2
testing replay of transactions
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4514
diff
changeset
|
1707 else if (e.GetErrorCode() == ErrorCode_DatabaseUnavailable) |
350a22c094f2
testing replay of transactions
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4514
diff
changeset
|
1708 { |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1709 if (count == maxRetries_) |
350a22c094f2
testing replay of transactions
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4514
diff
changeset
|
1710 { |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1711 throw; |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1712 } |
350a22c094f2
testing replay of transactions
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4514
diff
changeset
|
1713 else |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1714 { |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1715 count++; |
350a22c094f2
testing replay of transactions
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4514
diff
changeset
|
1716 boost::this_thread::sleep(boost::posix_time::milliseconds(1000)); |
350a22c094f2
testing replay of transactions
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4514
diff
changeset
|
1717 } |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1718 } |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1719 else |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1720 { |
350a22c094f2
testing replay of transactions
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4514
diff
changeset
|
1721 throw; |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1722 } |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1723 } |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1724 } |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1725 } |
4561
02510325d869
removed function wrappers for transactions in ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4560
diff
changeset
|
1726 |
4551
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1727 |
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1728 void ServerIndex::Apply(IReadOnlyOperations& operations) |
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1729 { |
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1730 ApplyInternal(&operations, NULL); |
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1731 } |
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1732 |
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1733 |
4551
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1734 void ServerIndex::Apply(IReadWriteOperations& operations) |
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1735 { |
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1736 ApplyInternal(NULL, &operations); |
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1737 } |
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1738 |
4554 | 1739 |
1740 bool ServerIndex::ExpandResource(Json::Value& target, | |
1741 const std::string& publicId, | |
1742 ResourceType level) | |
1743 { | |
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1744 class Operations : public ReadOnlyOperationsT4<bool&, Json::Value&, const std::string&, ResourceType> |
4554 | 1745 { |
1746 private: | |
4567 | 1747 ServerIndex& index_; // TODO - REMOVE |
4554 | 1748 |
1749 public: | |
4562 | 1750 explicit Operations(ServerIndex& index) : |
1751 index_(index) | |
4554 | 1752 { |
1753 } | |
1754 | |
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1755 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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1756 const Tuple& tuple) ORTHANC_OVERRIDE |
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1757 { |
4554 | 1758 // Lookup for the requested resource |
1759 int64_t internalId; // unused | |
1760 ResourceType type; | |
1761 std::string parent; | |
4562 | 1762 if (!transaction.LookupResourceAndParent(internalId, type, parent, tuple.get<2>()) || |
1763 type != tuple.get<3>()) | |
4554 | 1764 { |
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1765 tuple.get<0>() = false; |
4554 | 1766 } |
1767 else | |
1768 { | |
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1769 Json::Value& target = tuple.get<1>(); |
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1770 target = Json::objectValue; |
4554 | 1771 |
1772 // Set information about the parent resource (if it exists) | |
1773 if (type == ResourceType_Patient) | |
1774 { | |
1775 if (!parent.empty()) | |
1776 { | |
1777 throw OrthancException(ErrorCode_DatabasePlugin); | |
1778 } | |
1779 } | |
1780 else | |
1781 { | |
1782 if (parent.empty()) | |
1783 { | |
1784 throw OrthancException(ErrorCode_DatabasePlugin); | |
1785 } | |
1786 | |
1787 switch (type) | |
1788 { | |
1789 case ResourceType_Study: | |
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1790 target["ParentPatient"] = parent; |
4554 | 1791 break; |
1792 | |
1793 case ResourceType_Series: | |
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1794 target["ParentStudy"] = parent; |
4554 | 1795 break; |
1796 | |
1797 case ResourceType_Instance: | |
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1798 target["ParentSeries"] = parent; |
4554 | 1799 break; |
1800 | |
1801 default: | |
1802 throw OrthancException(ErrorCode_InternalError); | |
1803 } | |
1804 } | |
1805 | |
1806 // List the children resources | |
1807 std::list<std::string> children; | |
1808 transaction.GetChildrenPublicId(children, internalId); | |
1809 | |
1810 if (type != ResourceType_Instance) | |
1811 { | |
1812 Json::Value c = Json::arrayValue; | |
1813 | |
1814 for (std::list<std::string>::const_iterator | |
1815 it = children.begin(); it != children.end(); ++it) | |
1816 { | |
1817 c.append(*it); | |
1818 } | |
1819 | |
1820 switch (type) | |
1821 { | |
1822 case ResourceType_Patient: | |
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1823 target["Studies"] = c; |
4554 | 1824 break; |
1825 | |
1826 case ResourceType_Study: | |
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1827 target["Series"] = c; |
4554 | 1828 break; |
1829 | |
1830 case ResourceType_Series: | |
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1831 target["Instances"] = c; |
4554 | 1832 break; |
1833 | |
1834 default: | |
1835 throw OrthancException(ErrorCode_InternalError); | |
1836 } | |
1837 } | |
1838 | |
1839 // Extract the metadata | |
1840 std::map<MetadataType, std::string> metadata; | |
1841 transaction.GetAllMetadata(metadata, internalId); | |
1842 | |
1843 // Set the resource type | |
1844 switch (type) | |
1845 { | |
1846 case ResourceType_Patient: | |
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1847 target["Type"] = "Patient"; |
4554 | 1848 break; |
1849 | |
1850 case ResourceType_Study: | |
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1851 target["Type"] = "Study"; |
4554 | 1852 break; |
1853 | |
1854 case ResourceType_Series: | |
1855 { | |
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1856 target["Type"] = "Series"; |
4554 | 1857 |
1858 int64_t i; | |
1859 if (LookupIntegerMetadata(i, metadata, MetadataType_Series_ExpectedNumberOfInstances)) | |
1860 { | |
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1861 target["ExpectedNumberOfInstances"] = static_cast<int>(i); |
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1862 target["Status"] = EnumerationToString(transaction.GetSeriesStatus(internalId, i)); |
4554 | 1863 } |
1864 else | |
1865 { | |
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1866 target["ExpectedNumberOfInstances"] = Json::nullValue; |
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1867 target["Status"] = EnumerationToString(SeriesStatus_Unknown); |
4554 | 1868 } |
1869 | |
1870 break; | |
1871 } | |
1872 | |
1873 case ResourceType_Instance: | |
1874 { | |
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1875 target["Type"] = "Instance"; |
4554 | 1876 |
1877 FileInfo attachment; | |
1878 if (!transaction.LookupAttachment(attachment, internalId, FileContentType_Dicom)) | |
1879 { | |
1880 throw OrthancException(ErrorCode_InternalError); | |
1881 } | |
1882 | |
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1883 target["FileSize"] = static_cast<unsigned int>(attachment.GetUncompressedSize()); |
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1884 target["FileUuid"] = attachment.GetUuid(); |
4554 | 1885 |
1886 int64_t i; | |
1887 if (LookupIntegerMetadata(i, metadata, MetadataType_Instance_IndexInSeries)) | |
1888 { | |
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1889 target["IndexInSeries"] = static_cast<int>(i); |
4554 | 1890 } |
1891 else | |
1892 { | |
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1893 target["IndexInSeries"] = Json::nullValue; |
4554 | 1894 } |
1895 | |
1896 break; | |
1897 } | |
1898 | |
1899 default: | |
1900 throw OrthancException(ErrorCode_InternalError); | |
1901 } | |
1902 | |
1903 // Record the remaining information | |
4562 | 1904 target["ID"] = tuple.get<2>(); |
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1905 transaction.MainDicomTagsToJson(target, internalId, type); |
4554 | 1906 |
1907 std::string tmp; | |
1908 | |
1909 if (LookupStringMetadata(tmp, metadata, MetadataType_AnonymizedFrom)) | |
1910 { | |
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1911 target["AnonymizedFrom"] = tmp; |
4554 | 1912 } |
1913 | |
1914 if (LookupStringMetadata(tmp, metadata, MetadataType_ModifiedFrom)) | |
1915 { | |
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1916 target["ModifiedFrom"] = tmp; |
4554 | 1917 } |
1918 | |
1919 if (type == ResourceType_Patient || | |
1920 type == ResourceType_Study || | |
1921 type == ResourceType_Series) | |
1922 { | |
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1923 target["IsStable"] = !index_.IsUnstableResource(internalId); |
4554 | 1924 |
1925 if (LookupStringMetadata(tmp, metadata, MetadataType_LastUpdate)) | |
1926 { | |
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1927 target["LastUpdate"] = tmp; |
4554 | 1928 } |
1929 } | |
1930 | |
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1931 tuple.get<0>() = true; |
4554 | 1932 } |
1933 } | |
1934 }; | |
1935 | |
4562 | 1936 bool found; |
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1937 Operations operations(*this); |
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1938 operations.Apply(*this, found, target, publicId, level); |
4562 | 1939 return found; |
4554 | 1940 } |
1941 | |
1942 | |
1943 void ServerIndex::GetAllMetadata(std::map<MetadataType, std::string>& target, | |
1944 const std::string& publicId, | |
1945 ResourceType level) | |
1946 { | |
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1947 class Operations : public ReadOnlyOperationsT3<std::map<MetadataType, std::string>&, const std::string&, ResourceType> |
4554 | 1948 { |
1949 public: | |
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1950 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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1951 const Tuple& tuple) ORTHANC_OVERRIDE |
4554 | 1952 { |
1953 ResourceType type; | |
1954 int64_t id; | |
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1955 if (!transaction.LookupResource(id, type, tuple.get<1>()) || |
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1956 tuple.get<2>() != type) |
4554 | 1957 { |
1958 throw OrthancException(ErrorCode_UnknownResource); | |
1959 } | |
1960 else | |
1961 { | |
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1962 transaction.GetAllMetadata(tuple.get<0>(), id); |
4554 | 1963 } |
1964 } | |
1965 }; | |
1966 | |
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1967 Operations operations; |
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1968 operations.Apply(*this, target, publicId, level); |
4554 | 1969 } |
4555 | 1970 |
1971 | |
1972 bool ServerIndex::LookupAttachment(FileInfo& attachment, | |
1973 const std::string& instancePublicId, | |
1974 FileContentType contentType) | |
1975 { | |
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1976 class Operations : public ReadOnlyOperationsT4<bool&, FileInfo&, const std::string&, FileContentType> |
4555 | 1977 { |
1978 public: | |
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1979 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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1980 const Tuple& tuple) ORTHANC_OVERRIDE |
4555 | 1981 { |
1982 int64_t internalId; | |
1983 ResourceType type; | |
4562 | 1984 if (!transaction.LookupResource(internalId, type, tuple.get<2>())) |
4555 | 1985 { |
1986 throw OrthancException(ErrorCode_UnknownResource); | |
1987 } | |
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1988 else if (transaction.LookupAttachment(tuple.get<1>(), internalId, tuple.get<3>())) |
4555 | 1989 { |
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1990 assert(tuple.get<1>().GetContentType() == tuple.get<3>()); |
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1991 tuple.get<0>() = true; |
4555 | 1992 } |
1993 else | |
1994 { | |
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1995 tuple.get<0>() = false; |
4555 | 1996 } |
1997 } | |
1998 }; | |
1999 | |
4562 | 2000 bool found; |
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2001 Operations operations; |
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2002 operations.Apply(*this, found, attachment, instancePublicId, contentType); |
4562 | 2003 return found; |
4555 | 2004 } |
2005 | |
2006 | |
2007 void ServerIndex::GetAllUuids(std::list<std::string>& target, | |
2008 ResourceType resourceType) | |
2009 { | |
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2010 class Operations : public ReadOnlyOperationsT2<std::list<std::string>&, ResourceType> |
4555 | 2011 { |
2012 public: | |
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2013 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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2014 const Tuple& tuple) ORTHANC_OVERRIDE |
4555 | 2015 { |
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2016 // TODO - CANDIDATE FOR "TransactionType_Implicit" |
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2017 transaction.GetAllPublicIds(tuple.get<0>(), tuple.get<1>()); |
4555 | 2018 } |
2019 }; | |
2020 | |
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2021 Operations operations; |
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2022 operations.Apply(*this, target, resourceType); |
4555 | 2023 } |
2024 | |
2025 | |
2026 void ServerIndex::GetAllUuids(std::list<std::string>& target, | |
2027 ResourceType resourceType, | |
2028 size_t since, | |
2029 size_t limit) | |
2030 { | |
2031 if (limit == 0) | |
2032 { | |
2033 target.clear(); | |
2034 } | |
2035 else | |
2036 { | |
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2037 class Operations : public ReadOnlyOperationsT4<std::list<std::string>&, ResourceType, size_t, size_t> |
4555 | 2038 { |
2039 public: | |
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2040 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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2041 const Tuple& tuple) ORTHANC_OVERRIDE |
4555 | 2042 { |
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2043 // TODO - CANDIDATE FOR "TransactionType_Implicit" |
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2044 transaction.GetAllPublicIds(tuple.get<0>(), tuple.get<1>(), tuple.get<2>(), tuple.get<3>()); |
4555 | 2045 } |
2046 }; | |
2047 | |
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2048 Operations operations; |
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2049 operations.Apply(*this, target, resourceType, since, limit); |
4555 | 2050 } |
2051 } | |
4558 | 2052 |
2053 | |
2054 void ServerIndex::GetGlobalStatistics(/* out */ uint64_t& diskSize, | |
2055 /* out */ uint64_t& uncompressedSize, | |
2056 /* out */ uint64_t& countPatients, | |
2057 /* out */ uint64_t& countStudies, | |
2058 /* out */ uint64_t& countSeries, | |
2059 /* out */ uint64_t& countInstances) | |
2060 { | |
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2061 class Operations : public ReadOnlyOperationsT6<uint64_t&, uint64_t&, uint64_t&, uint64_t&, uint64_t&, uint64_t&> |
4558 | 2062 { |
2063 public: | |
2064 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2065 const Tuple& tuple) ORTHANC_OVERRIDE | |
2066 { | |
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2067 tuple.get<0>() = transaction.GetTotalCompressedSize(); |
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2068 tuple.get<1>() = transaction.GetTotalUncompressedSize(); |
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2069 tuple.get<2>() = transaction.GetResourceCount(ResourceType_Patient); |
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2070 tuple.get<3>() = transaction.GetResourceCount(ResourceType_Study); |
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2071 tuple.get<4>() = transaction.GetResourceCount(ResourceType_Series); |
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2072 tuple.get<5>() = transaction.GetResourceCount(ResourceType_Instance); |
4558 | 2073 } |
2074 }; | |
2075 | |
2076 Operations operations; | |
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2077 operations.Apply(*this, diskSize, uncompressedSize, countPatients, |
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2078 countStudies, countSeries, countInstances); |
4558 | 2079 } |
2080 | |
2081 | |
2082 void ServerIndex::GetChanges(Json::Value& target, | |
2083 int64_t since, | |
2084 unsigned int maxResults) | |
2085 { | |
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2086 class Operations : public ReadOnlyOperationsT3<Json::Value&, int64_t, unsigned int> |
4558 | 2087 { |
2088 public: | |
2089 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2090 const Tuple& tuple) ORTHANC_OVERRIDE | |
2091 { | |
2092 // NB: In Orthanc <= 1.3.2, a transaction was missing, as | |
2093 // "GetLastChange()" involves calls to "GetPublicId()" | |
2094 | |
2095 std::list<ServerIndexChange> changes; | |
2096 bool done; | |
2097 bool hasLast = false; | |
2098 int64_t last = 0; | |
2099 | |
2100 transaction.GetChanges(changes, done, tuple.get<1>(), tuple.get<2>()); | |
2101 if (changes.empty()) | |
2102 { | |
2103 last = transaction.GetLastChangeIndex(); | |
2104 hasLast = true; | |
2105 } | |
2106 | |
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2107 FormatLog(tuple.get<0>(), changes, "Changes", done, tuple.get<1>(), hasLast, last); |
4558 | 2108 } |
2109 }; | |
2110 | |
2111 Operations operations; | |
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2112 operations.Apply(*this, target, since, maxResults); |
4558 | 2113 } |
2114 | |
2115 | |
2116 void ServerIndex::GetLastChange(Json::Value& target) | |
2117 { | |
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2118 class Operations : public ReadOnlyOperationsT1<Json::Value&> |
4558 | 2119 { |
2120 public: | |
2121 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2122 const Tuple& tuple) ORTHANC_OVERRIDE | |
2123 { | |
2124 // NB: In Orthanc <= 1.3.2, a transaction was missing, as | |
2125 // "GetLastChange()" involves calls to "GetPublicId()" | |
2126 | |
2127 std::list<ServerIndexChange> changes; | |
2128 bool hasLast = false; | |
2129 int64_t last = 0; | |
2130 | |
2131 transaction.GetLastChange(changes); | |
2132 if (changes.empty()) | |
2133 { | |
2134 last = transaction.GetLastChangeIndex(); | |
2135 hasLast = true; | |
2136 } | |
2137 | |
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2138 FormatLog(tuple.get<0>(), changes, "Changes", true, 0, hasLast, last); |
4558 | 2139 } |
2140 }; | |
2141 | |
2142 Operations operations; | |
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2143 operations.Apply(*this, target); |
4558 | 2144 } |
2145 | |
2146 | |
2147 void ServerIndex::GetExportedResources(Json::Value& target, | |
2148 int64_t since, | |
2149 unsigned int maxResults) | |
2150 { | |
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2151 class Operations : public ReadOnlyOperationsT3<Json::Value&, int64_t, unsigned int> |
4558 | 2152 { |
2153 public: | |
2154 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2155 const Tuple& tuple) ORTHANC_OVERRIDE | |
2156 { | |
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2157 // TODO - CANDIDATE FOR "TransactionType_Implicit" |
4558 | 2158 |
2159 std::list<ExportedResource> exported; | |
2160 bool done; | |
2161 transaction.GetExportedResources(exported, done, tuple.get<1>(), tuple.get<2>()); | |
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2162 FormatLog(tuple.get<0>(), exported, "Exports", done, tuple.get<1>(), false, -1); |
4558 | 2163 } |
2164 }; | |
2165 | |
2166 Operations operations; | |
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2167 operations.Apply(*this, target, since, maxResults); |
4558 | 2168 } |
2169 | |
2170 | |
2171 void ServerIndex::GetLastExportedResource(Json::Value& target) | |
2172 { | |
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2173 class Operations : public ReadOnlyOperationsT1<Json::Value&> |
4558 | 2174 { |
2175 public: | |
2176 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2177 const Tuple& tuple) ORTHANC_OVERRIDE | |
2178 { | |
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2179 // TODO - CANDIDATE FOR "TransactionType_Implicit" |
4558 | 2180 |
2181 std::list<ExportedResource> exported; | |
2182 transaction.GetLastExportedResource(exported); | |
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2183 FormatLog(tuple.get<0>(), exported, "Exports", true, 0, false, -1); |
4558 | 2184 } |
2185 }; | |
2186 | |
2187 Operations operations; | |
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2188 operations.Apply(*this, target); |
4558 | 2189 } |
4559 | 2190 |
2191 | |
2192 bool ServerIndex::IsProtectedPatient(const std::string& publicId) | |
2193 { | |
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2194 class Operations : public ReadOnlyOperationsT2<bool&, const std::string&> |
4559 | 2195 { |
2196 public: | |
2197 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2198 const Tuple& tuple) ORTHANC_OVERRIDE | |
2199 { | |
2200 // Lookup for the requested resource | |
2201 int64_t id; | |
2202 ResourceType type; | |
4562 | 2203 if (!transaction.LookupResource(id, type, tuple.get<1>()) || |
4559 | 2204 type != ResourceType_Patient) |
2205 { | |
2206 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
2207 } | |
2208 else | |
2209 { | |
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2210 tuple.get<0>() = transaction.IsProtectedPatient(id); |
4559 | 2211 } |
2212 } | |
2213 }; | |
4562 | 2214 |
2215 bool isProtected; | |
4559 | 2216 Operations operations; |
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2217 operations.Apply(*this, isProtected, publicId); |
4562 | 2218 return isProtected; |
4559 | 2219 } |
2220 | |
2221 | |
2222 void ServerIndex::GetChildren(std::list<std::string>& result, | |
2223 const std::string& publicId) | |
2224 { | |
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2225 class Operations : public ReadOnlyOperationsT2<std::list<std::string>&, const std::string&> |
4559 | 2226 { |
2227 public: | |
2228 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2229 const Tuple& tuple) ORTHANC_OVERRIDE | |
2230 { | |
2231 ResourceType type; | |
2232 int64_t resource; | |
2233 if (!transaction.LookupResource(resource, type, tuple.get<1>())) | |
2234 { | |
2235 throw OrthancException(ErrorCode_UnknownResource); | |
2236 } | |
2237 else if (type == ResourceType_Instance) | |
2238 { | |
2239 // An instance cannot have a child | |
2240 throw OrthancException(ErrorCode_BadParameterType); | |
2241 } | |
2242 else | |
2243 { | |
2244 std::list<int64_t> tmp; | |
2245 transaction.GetChildrenInternalId(tmp, resource); | |
2246 | |
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2247 tuple.get<0>().clear(); |
4559 | 2248 |
2249 for (std::list<int64_t>::const_iterator | |
2250 it = tmp.begin(); it != tmp.end(); ++it) | |
2251 { | |
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2252 tuple.get<0>().push_back(transaction.GetPublicId(*it)); |
4559 | 2253 } |
2254 } | |
2255 } | |
2256 }; | |
2257 | |
2258 Operations operations; | |
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2259 operations.Apply(*this, result, publicId); |
4559 | 2260 } |
2261 | |
2262 | |
2263 void ServerIndex::GetChildInstances(std::list<std::string>& result, | |
2264 const std::string& publicId) | |
2265 { | |
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2266 class Operations : public ReadOnlyOperationsT2<std::list<std::string>&, const std::string&> |
4559 | 2267 { |
2268 public: | |
2269 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2270 const Tuple& tuple) ORTHANC_OVERRIDE | |
2271 { | |
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2272 tuple.get<0>().clear(); |
4559 | 2273 |
2274 ResourceType type; | |
2275 int64_t top; | |
2276 if (!transaction.LookupResource(top, type, tuple.get<1>())) | |
2277 { | |
2278 throw OrthancException(ErrorCode_UnknownResource); | |
2279 } | |
2280 else if (type == ResourceType_Instance) | |
2281 { | |
2282 // The resource is already an instance: Do not go down the hierarchy | |
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2283 tuple.get<0>().push_back(tuple.get<1>()); |
4559 | 2284 } |
2285 else | |
2286 { | |
2287 std::stack<int64_t> toExplore; | |
2288 toExplore.push(top); | |
2289 | |
2290 std::list<int64_t> tmp; | |
2291 while (!toExplore.empty()) | |
2292 { | |
2293 // Get the internal ID of the current resource | |
2294 int64_t resource = toExplore.top(); | |
2295 toExplore.pop(); | |
2296 | |
2297 // TODO - This could be optimized by seeing how many | |
2298 // levels "type == transaction.GetResourceType(top)" is | |
2299 // above the "instances level" | |
2300 if (transaction.GetResourceType(resource) == ResourceType_Instance) | |
2301 { | |
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2302 tuple.get<0>().push_back(transaction.GetPublicId(resource)); |
4559 | 2303 } |
2304 else | |
2305 { | |
2306 // Tag all the children of this resource as to be explored | |
2307 transaction.GetChildrenInternalId(tmp, resource); | |
2308 for (std::list<int64_t>::const_iterator | |
2309 it = tmp.begin(); it != tmp.end(); ++it) | |
2310 { | |
2311 toExplore.push(*it); | |
2312 } | |
2313 } | |
2314 } | |
2315 } | |
2316 } | |
2317 }; | |
2318 | |
2319 Operations operations; | |
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2320 operations.Apply(*this, result, publicId); |
4559 | 2321 } |
4560 | 2322 |
2323 | |
2324 bool ServerIndex::LookupMetadata(std::string& target, | |
2325 const std::string& publicId, | |
2326 ResourceType expectedType, | |
2327 MetadataType type) | |
2328 { | |
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2329 class Operations : public ReadOnlyOperationsT5<bool&, std::string&, const std::string&, ResourceType, MetadataType> |
4560 | 2330 { |
2331 public: | |
2332 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2333 const Tuple& tuple) ORTHANC_OVERRIDE | |
2334 { | |
2335 ResourceType rtype; | |
2336 int64_t id; | |
4562 | 2337 if (!transaction.LookupResource(id, rtype, tuple.get<2>()) || |
2338 rtype != tuple.get<3>()) | |
4560 | 2339 { |
2340 throw OrthancException(ErrorCode_UnknownResource); | |
2341 } | |
2342 else | |
2343 { | |
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2344 tuple.get<0>() = transaction.LookupMetadata(tuple.get<1>(), id, tuple.get<4>()); |
4560 | 2345 } |
2346 } | |
2347 }; | |
4562 | 2348 |
2349 bool found; | |
4560 | 2350 Operations operations; |
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2351 operations.Apply(*this, found, target, publicId, expectedType, type); |
4562 | 2352 return found; |
4560 | 2353 } |
2354 | |
2355 | |
2356 void ServerIndex::ListAvailableAttachments(std::set<FileContentType>& target, | |
2357 const std::string& publicId, | |
2358 ResourceType expectedType) | |
2359 { | |
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2360 class Operations : public ReadOnlyOperationsT3<std::set<FileContentType>&, const std::string&, ResourceType> |
4560 | 2361 { |
2362 public: | |
2363 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2364 const Tuple& tuple) ORTHANC_OVERRIDE | |
2365 { | |
2366 ResourceType type; | |
2367 int64_t id; | |
2368 if (!transaction.LookupResource(id, type, tuple.get<1>()) || | |
2369 tuple.get<2>() != type) | |
2370 { | |
2371 throw OrthancException(ErrorCode_UnknownResource); | |
2372 } | |
2373 else | |
2374 { | |
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2375 transaction.ListAvailableAttachments(tuple.get<0>(), id); |
4560 | 2376 } |
2377 } | |
2378 }; | |
2379 | |
2380 Operations operations; | |
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2381 operations.Apply(*this, target, publicId, expectedType); |
4560 | 2382 } |
2383 | |
2384 | |
2385 bool ServerIndex::LookupParent(std::string& target, | |
2386 const std::string& publicId) | |
2387 { | |
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2388 class Operations : public ReadOnlyOperationsT3<bool&, std::string&, const std::string&> |
4560 | 2389 { |
2390 public: | |
2391 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2392 const Tuple& tuple) ORTHANC_OVERRIDE | |
2393 { | |
2394 ResourceType type; | |
2395 int64_t id; | |
4562 | 2396 if (!transaction.LookupResource(id, type, tuple.get<2>())) |
4560 | 2397 { |
2398 throw OrthancException(ErrorCode_UnknownResource); | |
2399 } | |
2400 else | |
2401 { | |
2402 int64_t parentId; | |
2403 if (transaction.LookupParent(parentId, id)) | |
2404 { | |
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2405 tuple.get<1>() = transaction.GetPublicId(parentId); |
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2406 tuple.get<0>() = true; |
4562 | 2407 } |
2408 else | |
2409 { | |
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2410 tuple.get<0>() = false; |
4562 | 2411 } |
2412 } | |
2413 } | |
2414 }; | |
2415 | |
2416 bool found; | |
2417 Operations operations; | |
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2418 operations.Apply(*this, found, target, publicId); |
4562 | 2419 return found; |
2420 } | |
2421 | |
2422 | |
2423 void ServerIndex::GetResourceStatistics(/* out */ ResourceType& type, | |
2424 /* out */ uint64_t& diskSize, | |
2425 /* out */ uint64_t& uncompressedSize, | |
2426 /* out */ unsigned int& countStudies, | |
2427 /* out */ unsigned int& countSeries, | |
2428 /* out */ unsigned int& countInstances, | |
2429 /* out */ uint64_t& dicomDiskSize, | |
2430 /* out */ uint64_t& dicomUncompressedSize, | |
2431 const std::string& publicId) | |
2432 { | |
2433 class Operations : public ServerIndex::IReadOnlyOperations | |
2434 { | |
2435 private: | |
2436 ResourceType& type_; | |
2437 uint64_t& diskSize_; | |
2438 uint64_t& uncompressedSize_; | |
2439 unsigned int& countStudies_; | |
2440 unsigned int& countSeries_; | |
2441 unsigned int& countInstances_; | |
2442 uint64_t& dicomDiskSize_; | |
2443 uint64_t& dicomUncompressedSize_; | |
2444 const std::string& publicId_; | |
2445 | |
2446 public: | |
2447 explicit Operations(ResourceType& type, | |
2448 uint64_t& diskSize, | |
2449 uint64_t& uncompressedSize, | |
2450 unsigned int& countStudies, | |
2451 unsigned int& countSeries, | |
2452 unsigned int& countInstances, | |
2453 uint64_t& dicomDiskSize, | |
2454 uint64_t& dicomUncompressedSize, | |
2455 const std::string& publicId) : | |
2456 type_(type), | |
2457 diskSize_(diskSize), | |
2458 uncompressedSize_(uncompressedSize), | |
2459 countStudies_(countStudies), | |
2460 countSeries_(countSeries), | |
2461 countInstances_(countInstances), | |
2462 dicomDiskSize_(dicomDiskSize), | |
2463 dicomUncompressedSize_(dicomUncompressedSize), | |
2464 publicId_(publicId) | |
2465 { | |
2466 } | |
2467 | |
2468 virtual void Apply(ServerIndex::ReadOnlyTransaction& transaction) ORTHANC_OVERRIDE | |
2469 { | |
2470 int64_t top; | |
2471 if (!transaction.LookupResource(top, type_, publicId_)) | |
2472 { | |
2473 throw OrthancException(ErrorCode_UnknownResource); | |
2474 } | |
2475 else | |
2476 { | |
2477 countInstances_ = 0; | |
2478 countSeries_ = 0; | |
2479 countStudies_ = 0; | |
2480 diskSize_ = 0; | |
2481 uncompressedSize_ = 0; | |
2482 dicomDiskSize_ = 0; | |
2483 dicomUncompressedSize_ = 0; | |
2484 | |
2485 std::stack<int64_t> toExplore; | |
2486 toExplore.push(top); | |
2487 | |
2488 while (!toExplore.empty()) | |
2489 { | |
2490 // Get the internal ID of the current resource | |
2491 int64_t resource = toExplore.top(); | |
2492 toExplore.pop(); | |
2493 | |
2494 ResourceType thisType = transaction.GetResourceType(resource); | |
2495 | |
2496 std::set<FileContentType> f; | |
2497 transaction.ListAvailableAttachments(f, resource); | |
2498 | |
2499 for (std::set<FileContentType>::const_iterator | |
2500 it = f.begin(); it != f.end(); ++it) | |
2501 { | |
2502 FileInfo attachment; | |
2503 if (transaction.LookupAttachment(attachment, resource, *it)) | |
2504 { | |
2505 if (attachment.GetContentType() == FileContentType_Dicom) | |
2506 { | |
2507 dicomDiskSize_ += attachment.GetCompressedSize(); | |
2508 dicomUncompressedSize_ += attachment.GetUncompressedSize(); | |
2509 } | |
2510 | |
2511 diskSize_ += attachment.GetCompressedSize(); | |
2512 uncompressedSize_ += attachment.GetUncompressedSize(); | |
2513 } | |
2514 } | |
2515 | |
2516 if (thisType == ResourceType_Instance) | |
2517 { | |
2518 countInstances_++; | |
2519 } | |
2520 else | |
2521 { | |
2522 switch (thisType) | |
2523 { | |
2524 case ResourceType_Study: | |
2525 countStudies_++; | |
2526 break; | |
2527 | |
2528 case ResourceType_Series: | |
2529 countSeries_++; | |
2530 break; | |
2531 | |
2532 default: | |
2533 break; | |
2534 } | |
2535 | |
2536 // Tag all the children of this resource as to be explored | |
2537 std::list<int64_t> tmp; | |
2538 transaction.GetChildrenInternalId(tmp, resource); | |
2539 for (std::list<int64_t>::const_iterator | |
2540 it = tmp.begin(); it != tmp.end(); ++it) | |
2541 { | |
2542 toExplore.push(*it); | |
2543 } | |
2544 } | |
2545 } | |
2546 | |
2547 if (countStudies_ == 0) | |
2548 { | |
2549 countStudies_ = 1; | |
2550 } | |
2551 | |
2552 if (countSeries_ == 0) | |
2553 { | |
2554 countSeries_ = 1; | |
4560 | 2555 } |
2556 } | |
2557 } | |
2558 }; | |
4562 | 2559 |
2560 Operations operations(type, diskSize, uncompressedSize, countStudies, countSeries, | |
2561 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); | |
2562 Apply(operations); | |
2563 } | |
2564 | |
2565 | |
2566 void ServerIndex::LookupIdentifierExact(std::vector<std::string>& result, | |
2567 ResourceType level, | |
2568 const DicomTag& tag, | |
2569 const std::string& value) | |
2570 { | |
2571 assert((level == ResourceType_Patient && tag == DICOM_TAG_PATIENT_ID) || | |
2572 (level == ResourceType_Study && tag == DICOM_TAG_STUDY_INSTANCE_UID) || | |
2573 (level == ResourceType_Study && tag == DICOM_TAG_ACCESSION_NUMBER) || | |
2574 (level == ResourceType_Series && tag == DICOM_TAG_SERIES_INSTANCE_UID) || | |
2575 (level == ResourceType_Instance && tag == DICOM_TAG_SOP_INSTANCE_UID)); | |
4560 | 2576 |
4562 | 2577 result.clear(); |
2578 | |
2579 DicomTagConstraint c(tag, ConstraintType_Equal, value, true, true); | |
2580 | |
2581 std::vector<DatabaseConstraint> query; | |
2582 query.push_back(c.ConvertToDatabaseConstraint(level, DicomTagType_Identifier)); | |
2583 | |
2584 | |
2585 class Operations : public ServerIndex::IReadOnlyOperations | |
2586 { | |
2587 private: | |
2588 std::vector<std::string>& result_; | |
2589 const std::vector<DatabaseConstraint>& query_; | |
2590 ResourceType level_; | |
2591 | |
2592 public: | |
2593 Operations(std::vector<std::string>& result, | |
2594 const std::vector<DatabaseConstraint>& query, | |
2595 ResourceType level) : | |
2596 result_(result), | |
2597 query_(query), | |
2598 level_(level) | |
2599 { | |
2600 } | |
2601 | |
2602 virtual void Apply(ReadOnlyTransaction& transaction) ORTHANC_OVERRIDE | |
2603 { | |
4570
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2604 // TODO - CANDIDATE FOR "TransactionType_Implicit" |
4562 | 2605 std::list<std::string> tmp; |
2606 transaction.ApplyLookupResources(tmp, NULL, query_, level_, 0); | |
2607 CopyListToVector(result_, tmp); | |
2608 } | |
2609 }; | |
2610 | |
2611 Operations operations(result, query, level); | |
2612 Apply(operations); | |
2613 } | |
2614 | |
2615 | |
2616 bool ServerIndex::LookupGlobalProperty(std::string& value, | |
2617 GlobalProperty property) | |
2618 { | |
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2619 class Operations : public ReadOnlyOperationsT3<bool&, std::string&, GlobalProperty> |
4562 | 2620 { |
2621 public: | |
2622 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2623 const Tuple& tuple) ORTHANC_OVERRIDE | |
2624 { | |
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2625 // TODO - CANDIDATE FOR "TransactionType_Implicit" |
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2626 tuple.get<0>() = transaction.LookupGlobalProperty(tuple.get<1>(), tuple.get<2>()); |
4562 | 2627 } |
2628 }; | |
2629 | |
2630 bool found; | |
4560 | 2631 Operations operations; |
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2632 operations.Apply(*this, found, value, property); |
4562 | 2633 return found; |
2634 } | |
2635 | |
2636 | |
2637 std::string ServerIndex::GetGlobalProperty(GlobalProperty property, | |
2638 const std::string& defaultValue) | |
2639 { | |
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2640 std::string s; |
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2641 if (LookupGlobalProperty(s, property)) |
4562 | 2642 { |
4563
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2643 return s; |
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2644 } |
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2645 else |
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2646 { |
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2647 return defaultValue; |
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2648 } |
4562 | 2649 } |
2650 | |
2651 | |
2652 bool ServerIndex::GetMainDicomTags(DicomMap& result, | |
2653 const std::string& publicId, | |
2654 ResourceType expectedType, | |
2655 ResourceType levelOfInterest) | |
2656 { | |
2657 // Yes, the following test could be shortened, but we wish to make it as clear as possible | |
2658 if (!(expectedType == ResourceType_Patient && levelOfInterest == ResourceType_Patient) && | |
2659 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Patient) && | |
2660 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Study) && | |
2661 !(expectedType == ResourceType_Series && levelOfInterest == ResourceType_Series) && | |
2662 !(expectedType == ResourceType_Instance && levelOfInterest == ResourceType_Instance)) | |
2663 { | |
2664 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
2665 } | |
2666 | |
2667 | |
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2668 class Operations : public ReadOnlyOperationsT5<bool&, DicomMap&, const std::string&, ResourceType, ResourceType> |
4562 | 2669 { |
2670 public: | |
2671 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2672 const Tuple& tuple) ORTHANC_OVERRIDE | |
2673 { | |
2674 // Lookup for the requested resource | |
2675 int64_t id; | |
2676 ResourceType type; | |
2677 if (!transaction.LookupResource(id, type, tuple.get<2>()) || | |
2678 type != tuple.get<3>()) | |
2679 { | |
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2680 tuple.get<0>() = false; |
4562 | 2681 } |
2682 else if (type == ResourceType_Study) | |
2683 { | |
2684 DicomMap tmp; | |
2685 transaction.GetMainDicomTags(tmp, id); | |
2686 | |
2687 switch (tuple.get<4>()) | |
2688 { | |
2689 case ResourceType_Patient: | |
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2690 tmp.ExtractPatientInformation(tuple.get<1>()); |
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2691 tuple.get<0>() = true; |
4562 | 2692 break; |
2693 | |
2694 case ResourceType_Study: | |
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2695 tmp.ExtractStudyInformation(tuple.get<1>()); |
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2696 tuple.get<0>() = true; |
4562 | 2697 break; |
2698 | |
2699 default: | |
2700 throw OrthancException(ErrorCode_InternalError); | |
2701 } | |
2702 } | |
2703 else | |
2704 { | |
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2705 transaction.GetMainDicomTags(tuple.get<1>(), id); |
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2706 tuple.get<0>() = true; |
4562 | 2707 } |
2708 } | |
2709 }; | |
2710 | |
2711 result.Clear(); | |
2712 | |
2713 bool found; | |
2714 Operations operations; | |
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2715 operations.Apply(*this, found, result, publicId, expectedType, levelOfInterest); |
4562 | 2716 return found; |
4560 | 2717 } |
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2718 |
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2719 |
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2720 bool ServerIndex::GetAllMainDicomTags(DicomMap& result, |
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2721 const std::string& instancePublicId) |
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2722 { |
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2723 class Operations : public ReadOnlyOperationsT3<bool&, DicomMap&, const std::string&> |
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2724 { |
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2725 public: |
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2726 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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2727 const Tuple& tuple) ORTHANC_OVERRIDE |
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2728 { |
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2729 // Lookup for the requested resource |
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2730 int64_t instance; |
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2731 ResourceType type; |
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2732 if (!transaction.LookupResource(instance, type, tuple.get<2>()) || |
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2733 type != ResourceType_Instance) |
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2734 { |
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2735 tuple.get<0>() = false; |
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2736 } |
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2737 else |
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2738 { |
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2739 DicomMap tmp; |
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2740 |
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2741 transaction.GetMainDicomTags(tmp, instance); |
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2742 tuple.get<1>().Merge(tmp); |
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2743 |
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2744 int64_t series; |
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2745 if (!transaction.LookupParent(series, instance)) |
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2746 { |
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2747 throw OrthancException(ErrorCode_InternalError); |
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2748 } |
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2749 |
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2750 tmp.Clear(); |
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2751 transaction.GetMainDicomTags(tmp, series); |
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2752 tuple.get<1>().Merge(tmp); |
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2753 |
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2754 int64_t study; |
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2755 if (!transaction.LookupParent(study, series)) |
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2756 { |
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2757 throw OrthancException(ErrorCode_InternalError); |
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2758 } |
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2759 |
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2760 tmp.Clear(); |
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2761 transaction.GetMainDicomTags(tmp, study); |
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2762 tuple.get<1>().Merge(tmp); |
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end of refactoring read-only transactions
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4562
diff
changeset
|
2763 |
bb1c365f9e44
end of refactoring read-only transactions
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parents:
4562
diff
changeset
|
2764 #ifndef NDEBUG |
bb1c365f9e44
end of refactoring read-only transactions
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4562
diff
changeset
|
2765 { |
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end of refactoring read-only transactions
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parents:
4562
diff
changeset
|
2766 // Sanity test to check that all the main DICOM tags from the |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2767 // patient level are copied at the study level |
bb1c365f9e44
end of refactoring read-only transactions
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4562
diff
changeset
|
2768 |
bb1c365f9e44
end of refactoring read-only transactions
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4562
diff
changeset
|
2769 int64_t patient; |
bb1c365f9e44
end of refactoring read-only transactions
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4562
diff
changeset
|
2770 if (!transaction.LookupParent(patient, study)) |
bb1c365f9e44
end of refactoring read-only transactions
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4562
diff
changeset
|
2771 { |
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end of refactoring read-only transactions
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diff
changeset
|
2772 throw OrthancException(ErrorCode_InternalError); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4562
diff
changeset
|
2773 } |
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end of refactoring read-only transactions
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diff
changeset
|
2774 |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2775 tmp.Clear(); |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2776 transaction.GetMainDicomTags(tmp, study); |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2777 |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2778 std::set<DicomTag> patientTags; |
bb1c365f9e44
end of refactoring read-only transactions
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parents:
4562
diff
changeset
|
2779 tmp.GetTags(patientTags); |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2780 |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2781 for (std::set<DicomTag>::const_iterator |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2782 it = patientTags.begin(); it != patientTags.end(); ++it) |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2783 { |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
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diff
changeset
|
2784 assert(tuple.get<1>().HasTag(*it)); |
4563
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2785 } |
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end of refactoring read-only transactions
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4562
diff
changeset
|
2786 } |
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end of refactoring read-only transactions
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diff
changeset
|
2787 #endif |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2788 |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
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diff
changeset
|
2789 tuple.get<0>() = true; |
4563
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end of refactoring read-only transactions
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diff
changeset
|
2790 } |
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changeset
|
2791 } |
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diff
changeset
|
2792 }; |
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end of refactoring read-only transactions
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diff
changeset
|
2793 |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2794 result.Clear(); |
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end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2795 |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2796 bool found; |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2797 Operations operations; |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
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diff
changeset
|
2798 operations.Apply(*this, found, result, instancePublicId); |
4563
bb1c365f9e44
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2799 return found; |
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diff
changeset
|
2800 } |
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|
2801 |
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end of refactoring read-only transactions
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diff
changeset
|
2802 |
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end of refactoring read-only transactions
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diff
changeset
|
2803 bool ServerIndex::LookupResourceType(ResourceType& type, |
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diff
changeset
|
2804 const std::string& publicId) |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2805 { |
4564
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avoid copy of objects in ServerIndex
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diff
changeset
|
2806 class Operations : public ReadOnlyOperationsT3<bool&, ResourceType&, const std::string&> |
4563
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|
2807 { |
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end of refactoring read-only transactions
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diff
changeset
|
2808 public: |
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end of refactoring read-only transactions
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diff
changeset
|
2809 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
bb1c365f9e44
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diff
changeset
|
2810 const Tuple& tuple) ORTHANC_OVERRIDE |
bb1c365f9e44
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diff
changeset
|
2811 { |
4570
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
2812 // TODO - CANDIDATE FOR "TransactionType_Implicit" |
4563
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2813 int64_t id; |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
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diff
changeset
|
2814 tuple.get<0>() = transaction.LookupResource(id, tuple.get<1>(), tuple.get<2>()); |
4563
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|
2815 } |
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changeset
|
2816 }; |
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diff
changeset
|
2817 |
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end of refactoring read-only transactions
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diff
changeset
|
2818 bool found; |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2819 Operations operations; |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
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diff
changeset
|
2820 operations.Apply(*this, found, type, publicId); |
4563
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2821 return found; |
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changeset
|
2822 } |
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end of refactoring read-only transactions
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|
2823 |
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end of refactoring read-only transactions
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changeset
|
2824 |
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end of refactoring read-only transactions
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diff
changeset
|
2825 unsigned int ServerIndex::GetDatabaseVersion() |
bb1c365f9e44
end of refactoring read-only transactions
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4562
diff
changeset
|
2826 { |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
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diff
changeset
|
2827 class Operations : public ReadOnlyOperationsT1<unsigned int&> |
4563
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end of refactoring read-only transactions
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diff
changeset
|
2828 { |
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end of refactoring read-only transactions
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diff
changeset
|
2829 public: |
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end of refactoring read-only transactions
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diff
changeset
|
2830 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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4562
diff
changeset
|
2831 const Tuple& tuple) ORTHANC_OVERRIDE |
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diff
changeset
|
2832 { |
4570
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
2833 // TODO - CANDIDATE FOR "TransactionType_Implicit" |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
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changeset
|
2834 tuple.get<0>() = transaction.GetDatabaseVersion(); |
4563
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2835 } |
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end of refactoring read-only transactions
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changeset
|
2836 }; |
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diff
changeset
|
2837 |
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end of refactoring read-only transactions
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diff
changeset
|
2838 unsigned int version; |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2839 Operations operations; |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
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diff
changeset
|
2840 operations.Apply(*this, version); |
4563
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2841 return version; |
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changeset
|
2842 } |
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diff
changeset
|
2843 |
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changeset
|
2844 |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2845 bool ServerIndex::LookupParent(std::string& target, |
bb1c365f9e44
end of refactoring read-only transactions
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diff
changeset
|
2846 const std::string& publicId, |
bb1c365f9e44
end of refactoring read-only transactions
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4562
diff
changeset
|
2847 ResourceType parentType) |
bb1c365f9e44
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changeset
|
2848 { |
4564
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avoid copy of objects in ServerIndex
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diff
changeset
|
2849 class Operations : public ReadOnlyOperationsT4<bool&, std::string&, const std::string&, ResourceType> |
4563
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changeset
|
2850 { |
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diff
changeset
|
2851 public: |
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diff
changeset
|
2852 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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changeset
|
2853 const Tuple& tuple) ORTHANC_OVERRIDE |
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|
2854 { |
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changeset
|
2855 ResourceType type; |
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diff
changeset
|
2856 int64_t id; |
bb1c365f9e44
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changeset
|
2857 if (!transaction.LookupResource(id, type, tuple.get<2>())) |
bb1c365f9e44
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|
2858 { |
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changeset
|
2859 throw OrthancException(ErrorCode_UnknownResource); |
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changeset
|
2860 } |
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changeset
|
2861 |
bb1c365f9e44
end of refactoring read-only transactions
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changeset
|
2862 while (type != tuple.get<3>()) |
bb1c365f9e44
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changeset
|
2863 { |
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changeset
|
2864 int64_t parentId; |
bb1c365f9e44
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changeset
|
2865 |
bb1c365f9e44
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changeset
|
2866 if (type == ResourceType_Patient || // Cannot further go up in hierarchy |
bb1c365f9e44
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changeset
|
2867 !transaction.LookupParent(parentId, id)) |
bb1c365f9e44
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changeset
|
2868 { |
4564
5a0adc1c19a9
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4563
diff
changeset
|
2869 tuple.get<0>() = false; |
4563
bb1c365f9e44
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changeset
|
2870 return; |
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changeset
|
2871 } |
bb1c365f9e44
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changeset
|
2872 |
bb1c365f9e44
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changeset
|
2873 id = parentId; |
bb1c365f9e44
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diff
changeset
|
2874 type = GetParentResourceType(type); |
bb1c365f9e44
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changeset
|
2875 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2876 |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4563
diff
changeset
|
2877 tuple.get<0>() = true; |
5a0adc1c19a9
avoid copy of objects in ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4563
diff
changeset
|
2878 tuple.get<1>() = transaction.GetPublicId(id); |
4563
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2879 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2880 }; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2881 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2882 bool found; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2883 Operations operations; |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4563
diff
changeset
|
2884 operations.Apply(*this, found, target, publicId, parentType); |
4563
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4562
diff
changeset
|
2885 return found; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2886 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2887 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2888 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2889 void ServerIndex::ApplyLookupResources(std::vector<std::string>& resourcesId, |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2890 std::vector<std::string>* instancesId, |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2891 const DatabaseLookup& lookup, |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4562
diff
changeset
|
2892 ResourceType queryLevel, |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2893 size_t limit) |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2894 { |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4563
diff
changeset
|
2895 class Operations : public ReadOnlyOperationsT4<bool, const std::vector<DatabaseConstraint>&, ResourceType, size_t> |
4563
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2896 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2897 private: |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2898 std::list<std::string> resourcesList_; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2899 std::list<std::string> instancesList_; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4562
diff
changeset
|
2900 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2901 public: |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2902 const std::list<std::string>& GetResourcesList() const |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2903 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2904 return resourcesList_; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2905 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2906 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2907 const std::list<std::string>& GetInstancesList() const |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2908 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2909 return instancesList_; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2910 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2911 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2912 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2913 const Tuple& tuple) ORTHANC_OVERRIDE |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2914 { |
4570
648defffc8cc
new enum: TransactionType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4569
diff
changeset
|
2915 // TODO - CANDIDATE FOR "TransactionType_Implicit" |
4563
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2916 if (tuple.get<0>()) |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2917 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2918 transaction.ApplyLookupResources(resourcesList_, &instancesList_, tuple.get<1>(), tuple.get<2>(), tuple.get<3>()); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2919 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2920 else |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2921 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2922 transaction.ApplyLookupResources(resourcesList_, NULL, tuple.get<1>(), tuple.get<2>(), tuple.get<3>()); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2923 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2924 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2925 }; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2926 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2927 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2928 std::vector<DatabaseConstraint> normalized; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2929 NormalizeLookup(normalized, lookup, queryLevel); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2930 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2931 Operations operations; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2932 operations.Apply(*this, (instancesId != NULL), normalized, queryLevel, limit); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2933 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2934 CopyListToVector(resourcesId, operations.GetResourcesList()); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2935 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2936 if (instancesId != NULL) |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2937 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2938 CopyListToVector(*instancesId, operations.GetInstancesList()); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2939 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2940 } |
4565
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2941 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2942 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2943 bool ServerIndex::DeleteResource(Json::Value& target, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2944 const std::string& uuid, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2945 ResourceType expectedType) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2946 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2947 class Operations : public IReadWriteOperations |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2948 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2949 private: |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2950 bool found_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2951 Json::Value& target_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2952 const std::string& uuid_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2953 ResourceType expectedType_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2954 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2955 public: |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2956 Operations(Json::Value& target, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2957 const std::string& uuid, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2958 ResourceType expectedType) : |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2959 found_(false), |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2960 target_(target), |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2961 uuid_(uuid), |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2962 expectedType_(expectedType) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2963 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2964 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2965 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2966 bool IsFound() const |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2967 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2968 return found_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2969 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2970 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2971 virtual void Apply(ReadWriteTransaction& transaction, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2972 Listener& listener) ORTHANC_OVERRIDE |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2973 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2974 int64_t id; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2975 ResourceType type; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2976 if (!transaction.LookupResource(id, type, uuid_) || |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2977 expectedType_ != type) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2978 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2979 found_ = false; |
3495a3d97ab6
start of read-write transactions
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parents:
4564
diff
changeset
|
2980 } |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2981 else |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2982 { |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2983 found_ = true; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2984 transaction.DeleteResource(id); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2985 |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2986 if (listener.HasRemainingLevel()) |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2987 { |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2988 ResourceType remainingType = listener.GetRemainingType(); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2989 const std::string& remainingUuid = listener.GetRemainingPublicId(); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2990 |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2991 target_["RemainingAncestor"] = Json::Value(Json::objectValue); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2992 target_["RemainingAncestor"]["Path"] = GetBasePath(remainingType, remainingUuid); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2993 target_["RemainingAncestor"]["Type"] = EnumerationToString(remainingType); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2994 target_["RemainingAncestor"]["ID"] = remainingUuid; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2995 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2996 else |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2997 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2998 target_["RemainingAncestor"] = Json::nullValue; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2999 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3000 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3001 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3002 }; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3003 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3004 Operations operations(target, uuid, expectedType); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3005 Apply(operations); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3006 return operations.IsFound(); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3007 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3008 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3009 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3010 void ServerIndex::LogExportedResource(const std::string& publicId, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3011 const std::string& remoteModality) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3012 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3013 class Operations : public IReadWriteOperations |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3014 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3015 private: |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3016 const std::string& publicId_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3017 const std::string& remoteModality_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3018 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3019 public: |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3020 Operations(const std::string& publicId, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3021 const std::string& remoteModality) : |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3022 publicId_(publicId), |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3023 remoteModality_(remoteModality) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3024 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3025 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3026 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3027 virtual void Apply(ReadWriteTransaction& transaction, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3028 Listener& listener) ORTHANC_OVERRIDE |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3029 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3030 int64_t id; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3031 ResourceType type; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3032 if (!transaction.LookupResource(id, type, publicId_)) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3033 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3034 throw OrthancException(ErrorCode_InexistentItem); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3035 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3036 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3037 std::string patientId; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3038 std::string studyInstanceUid; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3039 std::string seriesInstanceUid; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3040 std::string sopInstanceUid; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3041 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3042 int64_t currentId = id; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3043 ResourceType currentType = type; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3044 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3045 // Iteratively go up inside the patient/study/series/instance hierarchy |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3046 bool done = false; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3047 while (!done) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3048 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3049 DicomMap map; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3050 transaction.GetMainDicomTags(map, currentId); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3051 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3052 switch (currentType) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3053 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3054 case ResourceType_Patient: |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3055 if (map.HasTag(DICOM_TAG_PATIENT_ID)) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3056 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3057 patientId = map.GetValue(DICOM_TAG_PATIENT_ID).GetContent(); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3058 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3059 done = true; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3060 break; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3061 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3062 case ResourceType_Study: |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3063 if (map.HasTag(DICOM_TAG_STUDY_INSTANCE_UID)) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3064 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3065 studyInstanceUid = map.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).GetContent(); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3066 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3067 currentType = ResourceType_Patient; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3068 break; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3069 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3070 case ResourceType_Series: |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3071 if (map.HasTag(DICOM_TAG_SERIES_INSTANCE_UID)) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3072 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3073 seriesInstanceUid = map.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).GetContent(); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3074 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3075 currentType = ResourceType_Study; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3076 break; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3077 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3078 case ResourceType_Instance: |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3079 if (map.HasTag(DICOM_TAG_SOP_INSTANCE_UID)) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3080 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3081 sopInstanceUid = map.GetValue(DICOM_TAG_SOP_INSTANCE_UID).GetContent(); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3082 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3083 currentType = ResourceType_Series; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3084 break; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3085 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3086 default: |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3087 throw OrthancException(ErrorCode_InternalError); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3088 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3089 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3090 // If we have not reached the Patient level, find the parent of |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3091 // the current resource |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3092 if (!done) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3093 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3094 bool ok = transaction.LookupParent(currentId, currentId); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3095 (void) ok; // Remove warning about unused variable in release builds |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3096 assert(ok); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3097 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3098 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3099 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3100 ExportedResource resource(-1, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3101 type, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3102 publicId_, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3103 remoteModality_, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3104 SystemToolbox::GetNowIsoString(true /* use UTC time (not local time) */), |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3105 patientId, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3106 studyInstanceUid, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3107 seriesInstanceUid, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3108 sopInstanceUid); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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3109 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3110 transaction.LogExportedResource(resource); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3111 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
3112 }; |
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start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3113 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3114 Operations operations(publicId, remoteModality); |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3115 Apply(operations); |
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start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3116 } |
4567 | 3117 |
3118 | |
3119 void ServerIndex::SetProtectedPatient(const std::string& publicId, | |
3120 bool isProtected) | |
3121 { | |
3122 class Operations : public IReadWriteOperations | |
3123 { | |
3124 private: | |
3125 const std::string& publicId_; | |
3126 bool isProtected_; | |
3127 | |
3128 public: | |
3129 Operations(const std::string& publicId, | |
3130 bool isProtected) : | |
3131 publicId_(publicId), | |
3132 isProtected_(isProtected) | |
3133 { | |
3134 } | |
3135 | |
3136 virtual void Apply(ReadWriteTransaction& transaction, | |
3137 Listener& listener) ORTHANC_OVERRIDE | |
3138 { | |
3139 // Lookup for the requested resource | |
3140 int64_t id; | |
3141 ResourceType type; | |
3142 if (!transaction.LookupResource(id, type, publicId_) || | |
3143 type != ResourceType_Patient) | |
3144 { | |
3145 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
3146 } | |
3147 else | |
3148 { | |
3149 transaction.SetProtectedPatient(id, isProtected_); | |
3150 } | |
3151 } | |
3152 }; | |
3153 | |
3154 Operations operations(publicId, isProtected); | |
3155 Apply(operations); | |
3156 | |
3157 if (isProtected) | |
3158 { | |
3159 LOG(INFO) << "Patient " << publicId << " has been protected"; | |
3160 } | |
3161 else | |
3162 { | |
3163 LOG(INFO) << "Patient " << publicId << " has been unprotected"; | |
3164 } | |
3165 } | |
3166 | |
3167 | |
3168 void ServerIndex::SetMetadata(const std::string& publicId, | |
3169 MetadataType type, | |
3170 const std::string& value) | |
3171 { | |
3172 class Operations : public IReadWriteOperations | |
3173 { | |
3174 private: | |
3175 const std::string& publicId_; | |
3176 MetadataType type_; | |
3177 const std::string& value_; | |
3178 | |
3179 public: | |
3180 Operations(const std::string& publicId, | |
3181 MetadataType type, | |
3182 const std::string& value) : | |
3183 publicId_(publicId), | |
3184 type_(type), | |
3185 value_(value) | |
3186 { | |
3187 } | |
3188 | |
3189 virtual void Apply(ReadWriteTransaction& transaction, | |
3190 Listener& listener) ORTHANC_OVERRIDE | |
3191 { | |
3192 ResourceType rtype; | |
3193 int64_t id; | |
3194 if (!transaction.LookupResource(id, rtype, publicId_)) | |
3195 { | |
3196 throw OrthancException(ErrorCode_UnknownResource); | |
3197 } | |
3198 else | |
3199 { | |
3200 transaction.SetMetadata(id, type_, value_); | |
3201 | |
3202 if (IsUserMetadata(type_)) | |
3203 { | |
3204 transaction.LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId_); | |
3205 } | |
3206 } | |
3207 } | |
3208 }; | |
3209 | |
3210 Operations operations(publicId, type, value); | |
3211 Apply(operations); | |
3212 } | |
3213 | |
3214 | |
3215 void ServerIndex::DeleteMetadata(const std::string& publicId, | |
3216 MetadataType type) | |
3217 { | |
3218 class Operations : public IReadWriteOperations | |
3219 { | |
3220 private: | |
3221 const std::string& publicId_; | |
3222 MetadataType type_; | |
3223 | |
3224 public: | |
3225 Operations(const std::string& publicId, | |
3226 MetadataType type) : | |
3227 publicId_(publicId), | |
3228 type_(type) | |
3229 { | |
3230 } | |
3231 | |
3232 virtual void Apply(ReadWriteTransaction& transaction, | |
3233 Listener& listener) ORTHANC_OVERRIDE | |
3234 { | |
3235 ResourceType rtype; | |
3236 int64_t id; | |
3237 if (!transaction.LookupResource(id, rtype, publicId_)) | |
3238 { | |
3239 throw OrthancException(ErrorCode_UnknownResource); | |
3240 } | |
3241 else | |
3242 { | |
3243 transaction.DeleteMetadata(id, type_); | |
3244 | |
3245 if (IsUserMetadata(type_)) | |
3246 { | |
3247 transaction.LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId_); | |
3248 } | |
3249 } | |
3250 } | |
3251 }; | |
3252 | |
3253 Operations operations(publicId, type); | |
3254 Apply(operations); | |
3255 } | |
3256 | |
3257 | |
3258 uint64_t ServerIndex::IncrementGlobalSequence(GlobalProperty sequence) | |
3259 { | |
3260 class Operations : public IReadWriteOperations | |
3261 { | |
3262 private: | |
3263 uint64_t newValue_; | |
3264 GlobalProperty sequence_; | |
3265 | |
3266 public: | |
4569 | 3267 explicit Operations(GlobalProperty sequence) : |
3268 newValue_(0), // Dummy initialization | |
4567 | 3269 sequence_(sequence) |
3270 { | |
3271 } | |
3272 | |
3273 uint64_t GetNewValue() const | |
3274 { | |
3275 return newValue_; | |
3276 } | |
3277 | |
3278 virtual void Apply(ReadWriteTransaction& transaction, | |
3279 Listener& listener) ORTHANC_OVERRIDE | |
3280 { | |
3281 std::string oldString; | |
3282 | |
3283 if (transaction.LookupGlobalProperty(oldString, sequence_)) | |
3284 { | |
3285 uint64_t oldValue; | |
3286 | |
3287 try | |
3288 { | |
3289 oldValue = boost::lexical_cast<uint64_t>(oldString); | |
3290 } | |
3291 catch (boost::bad_lexical_cast&) | |
3292 { | |
3293 LOG(ERROR) << "Cannot read the global sequence " | |
3294 << boost::lexical_cast<std::string>(sequence_) << ", resetting it"; | |
3295 oldValue = 0; | |
3296 } | |
3297 | |
3298 newValue_ = oldValue + 1; | |
3299 } | |
3300 else | |
3301 { | |
3302 // Initialize the sequence at "1" | |
3303 newValue_ = 1; | |
3304 } | |
3305 | |
3306 transaction.SetGlobalProperty(sequence_, boost::lexical_cast<std::string>(newValue_)); | |
3307 } | |
3308 }; | |
3309 | |
3310 Operations operations(sequence); | |
3311 Apply(operations); | |
4569 | 3312 assert(operations.GetNewValue() != 0); |
4567 | 3313 return operations.GetNewValue(); |
3314 } | |
3315 | |
3316 | |
3317 void ServerIndex::DeleteChanges() | |
3318 { | |
3319 class Operations : public IReadWriteOperations | |
3320 { | |
3321 public: | |
3322 virtual void Apply(ReadWriteTransaction& transaction, | |
3323 Listener& listener) ORTHANC_OVERRIDE | |
3324 { | |
3325 transaction.ClearChanges(); | |
3326 } | |
3327 }; | |
3328 | |
3329 Operations operations; | |
3330 Apply(operations); | |
3331 } | |
3332 | |
3333 | |
3334 void ServerIndex::DeleteExportedResources() | |
3335 { | |
3336 class Operations : public IReadWriteOperations | |
3337 { | |
3338 public: | |
3339 virtual void Apply(ReadWriteTransaction& transaction, | |
3340 Listener& listener) ORTHANC_OVERRIDE | |
3341 { | |
3342 transaction.ClearExportedResources(); | |
3343 } | |
3344 }; | |
3345 | |
3346 Operations operations; | |
3347 Apply(operations); | |
3348 } | |
3349 | |
3350 | |
3351 void ServerIndex::SetGlobalProperty(GlobalProperty property, | |
3352 const std::string& value) | |
3353 { | |
3354 class Operations : public IReadWriteOperations | |
3355 { | |
3356 private: | |
3357 GlobalProperty property_; | |
3358 const std::string& value_; | |
3359 | |
3360 public: | |
3361 Operations(GlobalProperty property, | |
3362 const std::string& value) : | |
3363 property_(property), | |
3364 value_(value) | |
3365 { | |
3366 } | |
3367 | |
3368 virtual void Apply(ReadWriteTransaction& transaction, | |
3369 Listener& listener) ORTHANC_OVERRIDE | |
3370 { | |
3371 transaction.SetGlobalProperty(property_, value_); | |
3372 } | |
3373 }; | |
3374 | |
3375 Operations operations(property, value); | |
3376 Apply(operations); | |
3377 } | |
4568 | 3378 |
3379 | |
3380 void ServerIndex::DeleteAttachment(const std::string& publicId, | |
3381 FileContentType type) | |
3382 { | |
3383 class Operations : public IReadWriteOperations | |
3384 { | |
3385 private: | |
3386 const std::string& publicId_; | |
3387 FileContentType type_; | |
3388 | |
3389 public: | |
3390 Operations(const std::string& publicId, | |
3391 FileContentType type) : | |
3392 publicId_(publicId), | |
3393 type_(type) | |
3394 { | |
3395 } | |
3396 | |
3397 virtual void Apply(ReadWriteTransaction& transaction, | |
3398 Listener& listener) ORTHANC_OVERRIDE | |
3399 { | |
3400 ResourceType rtype; | |
3401 int64_t id; | |
3402 if (!transaction.LookupResource(id, rtype, publicId_)) | |
3403 { | |
3404 throw OrthancException(ErrorCode_UnknownResource); | |
3405 } | |
3406 else | |
3407 { | |
3408 transaction.DeleteAttachment(id, type_); | |
3409 | |
3410 if (IsUserContentType(type_)) | |
3411 { | |
3412 transaction.LogChange(id, ChangeType_UpdatedAttachment, rtype, publicId_); | |
3413 } | |
3414 } | |
3415 } | |
3416 }; | |
3417 | |
3418 Operations operations(publicId, type); | |
3419 Apply(operations); | |
3420 } | |
3421 | |
3422 | |
3423 void ServerIndex::LogChange(ChangeType changeType, | |
3424 const std::string& publicId) | |
3425 { | |
3426 class Operations : public IReadWriteOperations | |
3427 { | |
3428 private: | |
3429 ChangeType changeType_; | |
3430 const std::string& publicId_; | |
3431 | |
3432 public: | |
3433 Operations(ChangeType changeType, | |
3434 const std::string& publicId) : | |
3435 changeType_(changeType), | |
3436 publicId_(publicId) | |
3437 { | |
3438 } | |
3439 | |
3440 virtual void Apply(ReadWriteTransaction& transaction, | |
3441 Listener& listener) ORTHANC_OVERRIDE | |
3442 { | |
3443 int64_t id; | |
3444 ResourceType type; | |
3445 if (!transaction.LookupResource(id, type, publicId_)) | |
3446 { | |
3447 throw OrthancException(ErrorCode_UnknownResource); | |
3448 } | |
3449 else | |
3450 { | |
3451 transaction.LogChange(id, changeType_, type, publicId_); | |
3452 } | |
3453 } | |
3454 }; | |
3455 | |
3456 Operations operations(changeType, publicId); | |
3457 Apply(operations); | |
3458 } | |
0 | 3459 } |