Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestResources.cpp @ 4860:3e9a76464e8a openssl-3.x
integration mainline->openssl-3.x
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Fri, 24 Dec 2021 16:52:51 +0100 |
| parents | 2e71a08eea15 8b51d65584f0 |
| children | 6eff25f70121 |
| rev | line source |
|---|---|
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2021 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU General Public License |
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "../PrecompiledHeadersServer.h" |
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24 #include "OrthancRestApi.h" |
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25 |
| 4045 | 26 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
| 27 #include "../../../OrthancFramework/Sources/DicomFormat/DicomImageInformation.h" | |
| 28 #include "../../../OrthancFramework/Sources/DicomParsing/DicomWebJsonVisitor.h" | |
| 29 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
| 30 #include "../../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" | |
| 31 #include "../../../OrthancFramework/Sources/HttpServer/HttpContentNegociation.h" | |
| 32 #include "../../../OrthancFramework/Sources/Images/Image.h" | |
| 33 #include "../../../OrthancFramework/Sources/Images/ImageProcessing.h" | |
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34 #include "../../../OrthancFramework/Sources/Images/NumpyWriter.h" |
| 4045 | 35 #include "../../../OrthancFramework/Sources/Logging.h" |
| 36 #include "../../../OrthancFramework/Sources/MultiThreading/Semaphore.h" | |
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37 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" |
| 4045 | 38 |
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39 #include "../OrthancConfiguration.h" |
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40 #include "../Search/DatabaseLookup.h" |
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41 #include "../ServerContext.h" |
| 2131 | 42 #include "../ServerToolbox.h" |
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43 #include "../SliceOrdering.h" |
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44 |
| 3687 | 45 // This "include" is mandatory for Release builds using Linux Standard Base |
| 46 #include <boost/math/special_functions/round.hpp> | |
| 47 | |
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48 |
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49 /** |
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50 * This semaphore is used to limit the number of concurrent HTTP |
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51 * requests on CPU-intensive routes of the REST API, in order to |
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52 * prevent exhaustion of resources (new in Orthanc 1.7.0). |
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53 **/ |
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54 static Orthanc::Semaphore throttlingSemaphore_(4); // TODO => PARAMETER? |
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55 |
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56 |
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57 static const std::string CHECK_REVISIONS = "CheckRevisions"; |
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58 |
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59 static const char* const IGNORE_LENGTH = "ignore-length"; |
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60 |
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61 |
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62 namespace Orthanc |
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63 { |
| 4415 | 64 static std::string GetDocumentationSampleResource(ResourceType type) |
| 65 { | |
| 66 switch (type) | |
| 67 { | |
| 68 case Orthanc::ResourceType_Instance: | |
| 69 return "https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2"; | |
| 70 break; | |
| 71 | |
| 72 case Orthanc::ResourceType_Series: | |
| 73 return "https://demo.orthanc-server.com/series/37836232-d13a2350-fa1dedc5-962b31aa-010f8e52"; | |
| 74 break; | |
| 75 | |
| 76 case Orthanc::ResourceType_Study: | |
| 77 return "https://demo.orthanc-server.com/studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988"; | |
| 78 break; | |
| 79 | |
| 80 case Orthanc::ResourceType_Patient: | |
| 81 return "https://demo.orthanc-server.com/patients/46e6332c-677825b6-202fcf7c-f787bc5f-7b07c382"; | |
| 82 break; | |
| 83 | |
| 84 default: | |
| 85 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 86 } | |
| 87 } | |
| 88 | |
| 89 | |
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90 static void AnswerDicomAsJson(RestApiCall& call, |
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91 const Json::Value& dicom, |
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92 DicomToJsonFormat mode) |
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93 { |
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94 if (mode != DicomToJsonFormat_Full) |
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95 { |
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96 Json::Value simplified; |
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97 Toolbox::SimplifyDicomAsJson(simplified, dicom, mode); |
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98 call.GetOutput().AnswerJson(simplified); |
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99 } |
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100 else |
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101 { |
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102 call.GetOutput().AnswerJson(dicom); |
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103 } |
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104 } |
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105 |
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106 |
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107 static void ParseSetOfTags(std::set<DicomTag>& target, |
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108 const RestApiGetCall& call, |
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109 const std::string& argument) |
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110 { |
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111 target.clear(); |
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112 |
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113 if (call.HasArgument(argument)) |
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114 { |
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115 std::vector<std::string> tags; |
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116 Toolbox::TokenizeString(tags, call.GetArgument(argument, ""), ','); |
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117 |
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118 for (size_t i = 0; i < tags.size(); i++) |
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119 { |
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120 target.insert(FromDcmtkBridge::ParseTag(tags[i])); |
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121 } |
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122 } |
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123 } |
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124 |
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125 |
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126 // List all the patients, studies, series or instances ---------------------- |
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127 |
| 1354 | 128 static void AnswerListOfResources(RestApiOutput& output, |
| 129 ServerIndex& index, | |
| 130 const std::list<std::string>& resources, | |
| 131 ResourceType level, | |
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132 bool expand, |
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133 DicomToJsonFormat format) |
| 1354 | 134 { |
| 135 Json::Value answer = Json::arrayValue; | |
| 136 | |
| 137 for (std::list<std::string>::const_iterator | |
| 1384 | 138 resource = resources.begin(); resource != resources.end(); ++resource) |
| 1354 | 139 { |
| 140 if (expand) | |
| 141 { | |
| 4554 | 142 Json::Value expanded; |
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143 if (index.ExpandResource(expanded, *resource, level, format)) |
| 1354 | 144 { |
| 4554 | 145 answer.append(expanded); |
| 1354 | 146 } |
| 147 } | |
| 148 else | |
| 149 { | |
| 150 answer.append(*resource); | |
| 151 } | |
| 152 } | |
| 153 | |
| 154 output.AnswerJson(answer); | |
| 155 } | |
| 156 | |
| 157 | |
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158 template <enum ResourceType resourceType> |
| 974 | 159 static void ListResources(RestApiGetCall& call) |
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160 { |
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161 if (call.IsDocumentation()) |
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162 { |
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163 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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164 |
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165 const std::string resources = GetResourceTypeText(resourceType, true /* plural */, false /* lower case */); |
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166 call.GetDocumentation() |
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167 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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168 .SetSummary("List the available " + resources) |
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169 .SetDescription("List the Orthanc identifiers of all the available DICOM " + resources) |
| 4403 | 170 .SetHttpGetArgument("limit", RestApiCallDocumentation::Type_Number, "Limit the number of results", false) |
| 171 .SetHttpGetArgument("since", RestApiCallDocumentation::Type_Number, "Show only the resources since the provided index", false) | |
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172 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, |
| 4403 | 173 "If present, retrieve detailed information about the individual " + resources, false) |
| 4404 | 174 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " |
| 175 "about the reported " + resources + " (if `expand` argument is provided)") | |
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176 .SetHttpGetSample("https://demo.orthanc-server.com/" + resources + "?since=0&limit=2", true); |
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177 return; |
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178 } |
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179 |
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180 ServerIndex& index = OrthancRestApi::GetIndex(call); |
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181 |
| 1354 | 182 std::list<std::string> result; |
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183 |
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184 if (call.HasArgument("limit") || |
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185 call.HasArgument("since")) |
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186 { |
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187 if (!call.HasArgument("limit")) |
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188 { |
| 2955 | 189 throw OrthancException(ErrorCode_BadRequest, |
| 190 "Missing \"limit\" argument for GET request against: " + | |
| 191 call.FlattenUri()); | |
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192 } |
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193 |
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194 if (!call.HasArgument("since")) |
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195 { |
| 2955 | 196 throw OrthancException(ErrorCode_BadRequest, |
| 197 "Missing \"since\" argument for GET request against: " + | |
| 198 call.FlattenUri()); | |
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199 } |
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200 |
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201 size_t since = boost::lexical_cast<size_t>(call.GetArgument("since", "")); |
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202 size_t limit = boost::lexical_cast<size_t>(call.GetArgument("limit", "")); |
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203 index.GetAllUuids(result, resourceType, since, limit); |
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204 } |
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205 else |
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206 { |
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207 index.GetAllUuids(result, resourceType); |
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208 } |
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209 |
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210 AnswerListOfResources(call.GetOutput(), index, result, resourceType, call.HasArgument("expand"), |
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211 OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human)); |
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212 } |
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213 |
| 4409 | 214 |
| 215 | |
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216 template <enum ResourceType resourceType> |
| 974 | 217 static void GetSingleResource(RestApiGetCall& call) |
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218 { |
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219 if (call.IsDocumentation()) |
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220 { |
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221 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
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222 |
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223 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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224 call.GetDocumentation() |
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225 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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226 .SetSummary("Get information about some " + resource) |
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227 .SetDescription("Get detailed information about the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 228 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 4409 | 229 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
| 230 .SetHttpGetSample(GetDocumentationSampleResource(resourceType), true); | |
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231 return; |
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232 } |
|
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233 |
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234 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
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235 |
| 4554 | 236 Json::Value json; |
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237 if (OrthancRestApi::GetIndex(call).ExpandResource( |
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238 json, call.GetUriComponent("id", ""), resourceType, format)) |
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239 { |
| 4554 | 240 call.GetOutput().AnswerJson(json); |
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241 } |
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242 } |
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243 |
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244 template <enum ResourceType resourceType> |
| 974 | 245 static void DeleteSingleResource(RestApiDeleteCall& call) |
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246 { |
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247 if (call.IsDocumentation()) |
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248 { |
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249 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
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250 call.GetDocumentation() |
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251 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
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252 .SetSummary("Delete some " + resource) |
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253 .SetDescription("Delete the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
| 4404 | 254 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); |
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255 return; |
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256 } |
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257 |
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258 Json::Value remainingAncestor; |
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259 if (OrthancRestApi::GetContext(call).DeleteResource(remainingAncestor, call.GetUriComponent("id", ""), resourceType)) |
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260 { |
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261 call.GetOutput().AnswerJson(remainingAncestor); |
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262 } |
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263 } |
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264 |
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265 |
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266 // Get information about a single patient ----------------------------------- |
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267 |
| 974 | 268 static void IsProtectedPatient(RestApiGetCall& call) |
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269 { |
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270 if (call.IsDocumentation()) |
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271 { |
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272 call.GetDocumentation() |
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273 .SetTag("Patients") |
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274 .SetSummary("Is the patient protected against recycling?") |
| 4404 | 275 .SetUriArgument("id", "Orthanc identifier of the patient of interest") |
| 4403 | 276 .AddAnswerType(MimeType_PlainText, "`1` if protected, `0` if not protected"); |
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277 return; |
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278 } |
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279 |
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280 std::string publicId = call.GetUriComponent("id", ""); |
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281 bool isProtected = OrthancRestApi::GetIndex(call).IsProtectedPatient(publicId); |
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282 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", MimeType_PlainText); |
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283 } |
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284 |
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285 |
| 974 | 286 static void SetPatientProtection(RestApiPutCall& call) |
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287 { |
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288 if (call.IsDocumentation()) |
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289 { |
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290 call.GetDocumentation() |
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291 .SetTag("Patients") |
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292 .SetSummary("Protect one patient against recycling") |
| 4403 | 293 .SetDescription("Check out configuration options `MaximumStorageSize` and `MaximumPatientCount`") |
| 4404 | 294 .SetUriArgument("id", "Orthanc identifier of the patient of interest"); |
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295 return; |
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296 } |
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297 |
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298 ServerContext& context = OrthancRestApi::GetContext(call); |
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299 |
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300 std::string publicId = call.GetUriComponent("id", ""); |
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301 |
|
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302 context.GetIndex().SetProtectedPatient(publicId, call.ParseBooleanBody()); |
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303 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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304 } |
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305 |
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306 |
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307 // Get information about a single instance ---------------------------------- |
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308 |
| 974 | 309 static void GetInstanceFile(RestApiGetCall& call) |
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310 { |
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311 if (call.IsDocumentation()) |
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312 { |
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313 call.GetDocumentation() |
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314 .SetTag("Instances") |
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315 .SetSummary("Download DICOM") |
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316 .SetDescription("Download one DICOM instance") |
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317 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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318 .SetHttpHeader("Accept", "This HTTP header can be set to retrieve the DICOM instance in DICOMweb format") |
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319 .AddAnswerType(MimeType_Dicom, "The DICOM instance") |
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320 .AddAnswerType(MimeType_DicomWebJson, "The DICOM instance, in DICOMweb JSON format") |
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321 .AddAnswerType(MimeType_DicomWebXml, "The DICOM instance, in DICOMweb XML format"); |
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322 return; |
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323 } |
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324 |
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325 ServerContext& context = OrthancRestApi::GetContext(call); |
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326 |
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327 std::string publicId = call.GetUriComponent("id", ""); |
|
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328 |
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329 HttpToolbox::Arguments::const_iterator accept = call.GetHttpHeaders().find("accept"); |
|
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330 if (accept != call.GetHttpHeaders().end()) |
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331 { |
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332 // New in Orthanc 1.5.4 |
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333 try |
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334 { |
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335 MimeType mime = StringToMimeType(accept->second.c_str()); |
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336 |
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337 if (mime == MimeType_DicomWebJson || |
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338 mime == MimeType_DicomWebXml) |
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339 { |
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340 DicomWebJsonVisitor visitor; |
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341 |
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342 { |
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343 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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344 locker.GetDicom().Apply(visitor); |
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345 } |
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346 |
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347 if (mime == MimeType_DicomWebJson) |
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348 { |
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349 std::string s = visitor.GetResult().toStyledString(); |
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350 call.GetOutput().AnswerBuffer(s, MimeType_DicomWebJson); |
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351 } |
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352 else |
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353 { |
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354 std::string xml; |
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355 visitor.FormatXml(xml); |
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356 call.GetOutput().AnswerBuffer(xml, MimeType_DicomWebXml); |
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357 } |
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358 |
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359 return; |
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360 } |
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361 } |
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362 catch (OrthancException&) |
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363 { |
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364 } |
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365 } |
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366 |
|
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367 context.AnswerAttachment(call.GetOutput(), publicId, FileContentType_Dicom); |
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368 } |
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369 |
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370 |
| 974 | 371 static void ExportInstanceFile(RestApiPostCall& call) |
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372 { |
| 4421 | 373 if (call.IsDocumentation()) |
| 374 { | |
| 375 call.GetDocumentation() | |
| 376 .SetTag("Instances") | |
| 377 .SetSummary("Write DICOM onto filesystem") | |
| 378 .SetDescription("Write the DICOM file onto the filesystem where Orthanc is running") | |
| 379 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 380 .AddRequestType(MimeType_PlainText, "Target path on the filesystem"); | |
| 381 return; | |
| 382 } | |
| 383 | |
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384 ServerContext& context = OrthancRestApi::GetContext(call); |
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385 |
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386 std::string publicId = call.GetUriComponent("id", ""); |
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387 |
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388 std::string dicom; |
| 2124 | 389 context.ReadDicom(dicom, publicId); |
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390 |
|
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391 std::string target; |
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392 call.BodyToString(target); |
| 2140 | 393 SystemToolbox::WriteFile(dicom, target); |
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394 |
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395 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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396 } |
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397 |
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398 |
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399 template <DicomToJsonFormat format> |
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400 static void GetInstanceTagsInternal(RestApiGetCall& call) |
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401 { |
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402 ServerContext& context = OrthancRestApi::GetContext(call); |
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403 |
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404 std::string publicId = call.GetUriComponent("id", ""); |
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405 |
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406 std::set<DicomTag> ignoreTagLength; |
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407 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
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408 |
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409 if (format != DicomToJsonFormat_Full || |
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410 !ignoreTagLength.empty()) |
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411 { |
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412 Json::Value full; |
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413 context.ReadDicomAsJson(full, publicId, ignoreTagLength); |
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414 AnswerDicomAsJson(call, full, format); |
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415 } |
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416 else |
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417 { |
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418 // This path allows one to avoid the JSON decoding if no |
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419 // simplification is asked, and if no "ignore-length" argument |
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420 // is present |
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421 Json::Value full; |
| 2127 | 422 context.ReadDicomAsJson(full, publicId); |
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423 call.GetOutput().AnswerJson(full); |
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424 } |
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425 } |
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426 |
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427 |
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428 static void GetInstanceTags(RestApiGetCall& call) |
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429 { |
| 4404 | 430 if (call.IsDocumentation()) |
| 431 { | |
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432 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 433 call.GetDocumentation() |
| 434 .SetTag("Instances") | |
| 435 .SetSummary("Get DICOM tags") | |
| 436 .SetDescription("Get the DICOM tags in the specified format. By default, the `full` format is used, which " | |
| 437 "combines hexadecimal tags with human-readable description.") | |
| 438 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
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439 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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440 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
| 4404 | 441 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
| 4415 | 442 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/tags", 10); |
| 4404 | 443 return; |
| 444 } | |
| 445 | |
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446 switch (OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)) |
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447 { |
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448 case DicomToJsonFormat_Human: |
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449 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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450 break; |
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451 |
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452 case DicomToJsonFormat_Short: |
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453 GetInstanceTagsInternal<DicomToJsonFormat_Short>(call); |
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454 break; |
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455 |
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456 case DicomToJsonFormat_Full: |
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457 GetInstanceTagsInternal<DicomToJsonFormat_Full>(call); |
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458 break; |
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459 |
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460 default: |
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461 throw OrthancException(ErrorCode_InternalError); |
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462 } |
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463 } |
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464 |
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465 |
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466 static void GetInstanceSimplifiedTags(RestApiGetCall& call) |
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467 { |
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468 if (call.IsDocumentation()) |
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469 { |
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470 call.GetDocumentation() |
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471 .SetTag("Instances") |
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472 .SetSummary("Get human-readable tags") |
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473 .SetDescription("Get the DICOM tags in human-readable format (same as the `/instances/{id}/tags?simplify` route)") |
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474 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
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475 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
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476 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
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477 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") |
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478 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/simplified-tags", 10); |
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479 return; |
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480 } |
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481 else |
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482 { |
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483 GetInstanceTagsInternal<DicomToJsonFormat_Human>(call); |
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484 } |
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485 } |
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486 |
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487 |
| 974 | 488 static void ListFrames(RestApiGetCall& call) |
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489 { |
| 4414 | 490 if (call.IsDocumentation()) |
| 491 { | |
| 492 call.GetDocumentation() | |
| 493 .SetTag("Instances") | |
| 494 .SetSummary("List available frames") | |
| 495 .SetDescription("List the frames that are available in the DICOM instance of interest") | |
| 496 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 497 .AddAnswerType(MimeType_Json, "The list of the indices of the available frames") | |
| 498 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/frames", true); | |
| 499 return; | |
| 500 } | |
| 501 | |
|
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502 std::string publicId = call.GetUriComponent("id", ""); |
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503 |
|
1950
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504 unsigned int numberOfFrames; |
|
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505 |
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506 { |
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507 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
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508 numberOfFrames = locker.GetDicom().GetFramesCount(); |
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509 } |
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510 |
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511 Json::Value result = Json::arrayValue; |
|
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512 for (unsigned int i = 0; i < numberOfFrames; i++) |
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513 { |
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514 result.append(i); |
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515 } |
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516 |
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517 call.GetOutput().AnswerJson(result); |
|
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518 } |
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519 |
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520 |
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521 namespace |
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522 { |
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523 class ImageToEncode |
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524 { |
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525 private: |
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526 std::unique_ptr<ImageAccessor>& image_; |
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527 ImageExtractionMode mode_; |
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528 bool invert_; |
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529 MimeType format_; |
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530 std::string answer_; |
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531 |
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532 public: |
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533 ImageToEncode(std::unique_ptr<ImageAccessor>& image, |
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534 ImageExtractionMode mode, |
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535 bool invert) : |
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536 image_(image), |
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537 mode_(mode), |
| 4205 | 538 invert_(invert), |
| 539 format_(MimeType_Binary) | |
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540 { |
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541 } |
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542 |
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543 void Answer(RestApiOutput& output) |
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544 { |
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545 output.AnswerBuffer(answer_, format_); |
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546 } |
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547 |
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548 void EncodeUsingPng() |
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549 { |
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550 format_ = MimeType_Png; |
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551 DicomImageDecoder::ExtractPngImage(answer_, image_, mode_, invert_); |
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552 } |
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553 |
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554 void EncodeUsingPam() |
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555 { |
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556 format_ = MimeType_Pam; |
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557 DicomImageDecoder::ExtractPamImage(answer_, image_, mode_, invert_); |
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558 } |
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559 |
|
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560 void EncodeUsingJpeg(uint8_t quality) |
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561 { |
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562 format_ = MimeType_Jpeg; |
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563 DicomImageDecoder::ExtractJpegImage(answer_, image_, mode_, invert_, quality); |
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564 } |
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565 }; |
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566 |
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567 class EncodePng : public HttpContentNegociation::IHandler |
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568 { |
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569 private: |
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570 ImageToEncode& image_; |
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571 |
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572 public: |
| 4205 | 573 explicit EncodePng(ImageToEncode& image) : image_(image) |
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574 { |
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575 } |
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576 |
|
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577 virtual void Handle(const std::string& type, |
| 4205 | 578 const std::string& subtype) ORTHANC_OVERRIDE |
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579 { |
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580 assert(type == "image"); |
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581 assert(subtype == "png"); |
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582 image_.EncodeUsingPng(); |
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583 } |
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584 }; |
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585 |
|
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586 class EncodePam : public HttpContentNegociation::IHandler |
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587 { |
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588 private: |
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589 ImageToEncode& image_; |
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590 |
|
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|
591 public: |
| 4205 | 592 explicit EncodePam(ImageToEncode& image) : image_(image) |
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593 { |
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594 } |
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|
595 |
|
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|
596 virtual void Handle(const std::string& type, |
| 4205 | 597 const std::string& subtype) ORTHANC_OVERRIDE |
|
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598 { |
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|
599 assert(type == "image"); |
| 2780 | 600 assert(subtype == "x-portable-arbitrarymap"); |
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601 image_.EncodeUsingPam(); |
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602 } |
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603 }; |
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|
604 |
|
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605 class EncodeJpeg : public HttpContentNegociation::IHandler |
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606 { |
|
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607 private: |
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608 ImageToEncode& image_; |
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609 unsigned int quality_; |
|
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610 |
|
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611 public: |
|
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612 EncodeJpeg(ImageToEncode& image, |
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613 const RestApiGetCall& call) : |
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614 image_(image) |
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615 { |
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616 std::string v = call.GetArgument("quality", "90" /* default JPEG quality */); |
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617 bool ok = false; |
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618 |
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619 try |
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620 { |
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621 quality_ = boost::lexical_cast<unsigned int>(v); |
| 1847 | 622 ok = (quality_ >= 1 && quality_ <= 100); |
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623 } |
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624 catch (boost::bad_lexical_cast&) |
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625 { |
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626 } |
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627 |
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628 if (!ok) |
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629 { |
| 2955 | 630 throw OrthancException( |
| 631 ErrorCode_BadRequest, | |
| 632 "Bad quality for a JPEG encoding (must be a number between 0 and 100): " + v); | |
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633 } |
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634 } |
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635 |
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636 virtual void Handle(const std::string& type, |
| 4205 | 637 const std::string& subtype) ORTHANC_OVERRIDE |
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638 { |
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639 assert(type == "image"); |
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640 assert(subtype == "jpeg"); |
|
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641 image_.EncodeUsingJpeg(quality_); |
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642 } |
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643 }; |
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644 } |
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645 |
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646 |
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647 namespace |
|
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648 { |
|
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649 class IDecodedFrameHandler : public boost::noncopyable |
|
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650 { |
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651 public: |
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652 virtual ~IDecodedFrameHandler() |
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653 { |
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654 } |
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655 |
|
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656 // "dicom" is non-NULL iff. "RequiresDicomTags() == true" |
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657 virtual void Handle(RestApiGetCall& call, |
|
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658 std::unique_ptr<ImageAccessor>& decoded, |
|
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659 const ParsedDicomFile* dicom, |
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660 unsigned int frame) = 0; |
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661 |
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662 virtual bool RequiresDicomTags() const = 0; |
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663 |
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664 static void Apply(RestApiGetCall& call, |
|
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665 IDecodedFrameHandler& handler, |
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666 ImageExtractionMode mode /* for generation of documentation */, |
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667 bool isRendered /* for generation of documentation */) |
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668 { |
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669 if (call.IsDocumentation()) |
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670 { |
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671 std::string m; |
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672 if (!isRendered) |
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673 { |
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674 switch (mode) |
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675 { |
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676 case ImageExtractionMode_Preview: |
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677 m = "preview"; |
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678 break; |
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679 case ImageExtractionMode_UInt8: |
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680 m = "uint8"; |
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681 break; |
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682 case ImageExtractionMode_UInt16: |
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683 m = "uint16"; |
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684 break; |
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685 case ImageExtractionMode_Int16: |
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686 m = "int16"; |
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687 break; |
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688 default: |
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689 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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690 } |
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691 } |
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692 |
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693 std::string description; |
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694 std::string verb = (isRendered ? "Render" : "Decode"); |
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695 |
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696 if (call.HasUriComponent("frame")) |
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697 { |
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698 description = verb + " one frame of interest from the given DICOM instance."; |
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699 call.GetDocumentation() |
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700 .SetSummary(verb + " a frame" + (m.empty() ? "" : " (" + m + ")")) |
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701 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
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702 } |
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703 else |
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704 { |
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705 description = verb + " the first frame of the given DICOM instance."; |
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706 call.GetDocumentation() |
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707 .SetSummary(verb + " an image" + (m.empty() ? "" : " (" + m + ")")); |
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708 } |
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709 |
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710 if (isRendered) |
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711 { |
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712 description += (" This function takes scaling into account (`RescaleSlope` and `RescaleIntercept` tags), " |
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713 "as well as the default windowing stored in the DICOM file (`WindowCenter` and `WindowWidth`tags), " |
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714 "and can be used to resize the resulting image. Color images are not affected by windowing."); |
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715 call.GetDocumentation() |
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716 .SetHttpGetArgument("window-center",RestApiCallDocumentation::Type_Number, "Windowing center", false) |
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717 .SetHttpGetArgument("window-width",RestApiCallDocumentation::Type_Number, "Windowing width", false) |
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718 .SetHttpGetArgument("width",RestApiCallDocumentation::Type_Number, "Width of the resized image", false) |
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719 .SetHttpGetArgument("height",RestApiCallDocumentation::Type_Number, "Height of the resized image", false) |
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720 .SetHttpGetArgument("smooth",RestApiCallDocumentation::Type_Boolean, "Whether to smooth image on resize", false); |
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721 } |
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722 else |
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723 { |
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724 switch (mode) |
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725 { |
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diff
changeset
|
726 case ImageExtractionMode_Preview: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
727 description += " The full dynamic range of grayscale images is rescaled to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
728 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
729 case ImageExtractionMode_UInt8: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
730 description += " Pixels of grayscale images are truncated to the [0,255] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
731 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
732 case ImageExtractionMode_UInt16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
733 description += " Pixels of grayscale images are truncated to the [0,65535] range."; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
734 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
735 case ImageExtractionMode_Int16: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
736 description += (" Pixels of grayscale images are truncated to the [-32768,32767] range. " |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
737 "Negative values must be interpreted according to two's complement."); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
738 break; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
739 default: |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
740 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
741 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
742 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
743 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
744 call.GetDocumentation() |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
745 .SetTag("Instances") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
746 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
747 .SetHttpGetArgument("quality", RestApiCallDocumentation::Type_Number, "Quality for JPEG images (between 1 and 100, defaults to 90)", false) |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
748 .SetHttpGetArgument("returnUnsupportedImage", RestApiCallDocumentation::Type_Boolean, "Returns an unsupported.png placeholder image if unable to provide the image instead of returning a 415 HTTP error (defaults to false)", false) |
|
4406
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
749 .SetHttpHeader("Accept", "Format of the resulting image. Can be `image/png` (default), `image/jpeg` or `image/x-portable-arbitrarymap`") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
750 .AddAnswerType(MimeType_Png, "PNG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
751 .AddAnswerType(MimeType_Jpeg, "JPEG image") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
752 .AddAnswerType(MimeType_Pam, "PAM image (Portable Arbitrary Map)") |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
753 .SetDescription(description); |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
754 |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
755 return; |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
756 } |
|
4cb9f66a1c7c
documenting generation of images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4405
diff
changeset
|
757 |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
758 ServerContext& context = OrthancRestApi::GetContext(call); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
759 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
760 std::string frameId = call.GetUriComponent("frame", "0"); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
761 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
762 unsigned int frame; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
763 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
764 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
765 frame = boost::lexical_cast<unsigned int>(frameId); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
766 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
767 catch (boost::bad_lexical_cast&) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
768 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
769 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
770 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
771 |
|
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3690
diff
changeset
|
772 std::unique_ptr<ImageAccessor> decoded; |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
773 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
774 try |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
775 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
776 std::string publicId = call.GetUriComponent("id", ""); |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
777 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
778 decoded.reset(context.DecodeDicomFrame(publicId, frame)); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
779 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
780 if (decoded.get() == NULL) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
781 { |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
782 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
783 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
784 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
785 |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
786 if (handler.RequiresDicomTags()) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
787 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
788 /** |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
789 * Retrieve a summary of the DICOM tags, which is |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
790 * necessary to deal with MONOCHROME1 photometric |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
791 * interpretation, and with windowing parameters. |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
792 **/ |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
changeset
|
793 ServerContext::DicomCacheLocker locker(context, publicId); |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
794 handler.Handle(call, decoded, &locker.GetDicom(), frame); |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
795 } |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
796 else |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
797 { |
|
4777
3b78ba359db3
Support detection of windowing and rescale in Philips multiframe images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4769
diff
changeset
|
798 handler.Handle(call, decoded, NULL, frame); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
799 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
800 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
801 catch (OrthancException& e) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
802 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
803 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange || |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
804 e.GetErrorCode() == ErrorCode_UnknownResource) |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
805 { |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
806 // The frame number is out of the range for this DICOM |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
807 // instance, the resource is not existent |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
808 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
809 else |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
810 { |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
811 if (call.HasArgument("returnUnsupportedImage")) |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
812 { |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
813 std::string root = ""; |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
814 for (size_t i = 1; i < call.GetFullUri().size(); i++) |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
815 { |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
816 root += "../"; |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
817 } |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
818 |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
819 call.GetOutput().Redirect(root + "app/images/unsupported.png"); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
820 } |
|
4804
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
821 else |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
822 { |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
823 call.GetOutput().SignalError(HttpStatus_415_UnsupportedMediaType); |
|
ae643f664628
new option returnUnsupportedImage for /preview & /rendered routes
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
824 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
825 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
826 return; |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
827 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
828 |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
829 } |
|
3685
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
830 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
831 |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
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832 static void DefaultHandler(RestApiGetCall& call, |
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833 std::unique_ptr<ImageAccessor>& decoded, |
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834 ImageExtractionMode mode, |
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835 bool invert) |
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836 { |
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837 ImageToEncode image(decoded, mode, invert); |
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838 |
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839 HttpContentNegociation negociation; |
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840 EncodePng png(image); |
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841 negociation.Register(MIME_PNG, png); |
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842 |
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843 EncodeJpeg jpeg(image, call); |
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844 negociation.Register(MIME_JPEG, jpeg); |
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845 |
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846 EncodePam pam(image); |
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847 negociation.Register(MIME_PAM, pam); |
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848 |
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849 if (negociation.Apply(call.GetHttpHeaders())) |
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850 { |
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851 image.Answer(call.GetOutput()); |
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852 } |
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853 } |
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854 }; |
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855 |
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856 |
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857 class GetImageHandler : public IDecodedFrameHandler |
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858 { |
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859 private: |
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860 ImageExtractionMode mode_; |
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861 |
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862 public: |
| 4205 | 863 explicit GetImageHandler(ImageExtractionMode mode) : |
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864 mode_(mode) |
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865 { |
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866 } |
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867 |
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868 virtual void Handle(RestApiGetCall& call, |
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869 std::unique_ptr<ImageAccessor>& decoded, |
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870 const ParsedDicomFile* dicom, |
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871 unsigned int frame) ORTHANC_OVERRIDE |
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872 { |
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873 bool invert = false; |
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874 |
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875 if (mode_ == ImageExtractionMode_Preview) |
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876 { |
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877 if (dicom == NULL) |
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878 { |
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879 throw OrthancException(ErrorCode_InternalError); |
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880 } |
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881 |
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882 DicomMap tags; |
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883 OrthancConfiguration::DefaultExtractDicomSummary(tags, *dicom); |
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884 |
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885 DicomImageInformation info(tags); |
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886 invert = (info.GetPhotometricInterpretation() == PhotometricInterpretation_Monochrome1); |
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887 } |
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888 |
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889 DefaultHandler(call, decoded, mode_, invert); |
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890 } |
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891 |
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892 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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893 { |
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894 return mode_ == ImageExtractionMode_Preview; |
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895 } |
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896 }; |
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897 |
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|
898 |
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|
899 class RenderedFrameHandler : public IDecodedFrameHandler |
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900 { |
|
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901 private: |
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902 static void GetUserArguments(double& windowWidth /* inout */, |
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903 double& windowCenter /* inout */, |
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|
904 unsigned int& argWidth, |
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905 unsigned int& argHeight, |
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906 bool& smooth, |
| 4205 | 907 const RestApiGetCall& call) |
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908 { |
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909 static const char* ARG_WINDOW_CENTER = "window-center"; |
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910 static const char* ARG_WINDOW_WIDTH = "window-width"; |
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911 static const char* ARG_WIDTH = "width"; |
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912 static const char* ARG_HEIGHT = "height"; |
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913 static const char* ARG_SMOOTH = "smooth"; |
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914 |
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915 if (call.HasArgument(ARG_WINDOW_WIDTH) && |
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916 !SerializationToolbox::ParseDouble(windowWidth, call.GetArgument(ARG_WINDOW_WIDTH, ""))) |
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917 { |
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918 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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919 "Bad value for argument: " + std::string(ARG_WINDOW_WIDTH)); |
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920 } |
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921 |
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922 if (call.HasArgument(ARG_WINDOW_CENTER) && |
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923 !SerializationToolbox::ParseDouble(windowCenter, call.GetArgument(ARG_WINDOW_CENTER, ""))) |
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924 { |
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925 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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926 "Bad value for argument: " + std::string(ARG_WINDOW_CENTER)); |
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927 } |
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928 |
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929 argWidth = 0; |
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930 argHeight = 0; |
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931 |
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932 if (call.HasArgument(ARG_WIDTH)) |
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933 { |
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934 try |
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|
935 { |
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936 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_WIDTH, "")); |
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937 if (tmp < 0) |
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938 { |
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3683
diff
changeset
|
939 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
940 "Argument cannot be negative: " + std::string(ARG_WIDTH)); |
|
3685
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rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
941 } |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
942 else |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3683
diff
changeset
|
943 { |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
944 argWidth = static_cast<unsigned int>(tmp); |
|
3685
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rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
945 } |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
946 } |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
947 catch (boost::bad_lexical_cast&) |
|
2cc34837d694
rendering of RGB24
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|
948 { |
|
2cc34837d694
rendering of RGB24
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|
949 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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implementation of "/instances/.../rendered" for grayscale images
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diff
changeset
|
950 "Bad value for argument: " + std::string(ARG_WIDTH)); |
|
3685
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rendering of RGB24
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diff
changeset
|
951 } |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
952 } |
|
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
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3640
diff
changeset
|
953 |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
954 if (call.HasArgument(ARG_HEIGHT)) |
|
3685
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rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
955 { |
|
2cc34837d694
rendering of RGB24
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
956 try |
|
2cc34837d694
rendering of RGB24
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parents:
3683
diff
changeset
|
957 { |
|
3690
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implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
958 int tmp = boost::lexical_cast<int>(call.GetArgument(ARG_HEIGHT, "")); |
|
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rendering of RGB24
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959 if (tmp < 0) |
|
2cc34837d694
rendering of RGB24
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|
960 { |
|
2cc34837d694
rendering of RGB24
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parents:
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diff
changeset
|
961 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
962 "Argument cannot be negative: " + std::string(ARG_HEIGHT)); |
|
3685
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rendering of RGB24
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|
963 } |
|
2cc34837d694
rendering of RGB24
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changeset
|
964 else |
|
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diff
changeset
|
965 { |
|
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|
966 argHeight = static_cast<unsigned int>(tmp); |
|
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967 } |
|
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changeset
|
968 } |
|
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|
969 catch (boost::bad_lexical_cast&) |
|
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|
970 { |
|
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changeset
|
971 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
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|
972 "Bad value for argument: " + std::string(ARG_HEIGHT)); |
|
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|
973 } |
|
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|
974 } |
|
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changeset
|
975 |
|
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|
976 smooth = false; |
|
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|
977 |
|
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changeset
|
978 if (call.HasArgument(ARG_SMOOTH)) |
|
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|
979 { |
|
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
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4460
diff
changeset
|
980 smooth = RestApiCall::ParseBoolean(call.GetArgument(ARG_SMOOTH, "")); |
|
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|
981 } |
|
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|
982 } |
|
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
983 |
|
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changeset
|
984 |
|
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
985 public: |
|
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implementation of "/instances/.../rendered" for grayscale images
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changeset
|
986 virtual void Handle(RestApiGetCall& call, |
|
3712
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replacing std::auto_ptr by std::unique_ptr
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|
987 std::unique_ptr<ImageAccessor>& decoded, |
|
4777
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Support detection of windowing and rescale in Philips multiframe images
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|
988 const ParsedDicomFile* dicom, |
|
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|
989 unsigned int frame) ORTHANC_OVERRIDE |
|
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changeset
|
990 { |
|
4769
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4722
diff
changeset
|
991 if (dicom == NULL) |
|
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IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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changeset
|
992 { |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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changeset
|
993 throw OrthancException(ErrorCode_InternalError); |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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changeset
|
994 } |
|
9da6ca57a977
IDecodedFrameHandler can access full ParsedDicomFile instead of the DicomMap summary
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parents:
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diff
changeset
|
995 |
|
4777
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Support detection of windowing and rescale in Philips multiframe images
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|
996 PhotometricInterpretation photometric; |
|
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Support detection of windowing and rescale in Philips multiframe images
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|
997 const bool invert = (dicom->LookupPhotometricInterpretation(photometric) && |
|
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|
998 photometric == PhotometricInterpretation_Monochrome1); |
|
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changeset
|
999 |
|
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Support detection of windowing and rescale in Philips multiframe images
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|
1000 double rescaleIntercept, rescaleSlope, windowCenter, windowWidth; |
|
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1001 dicom->GetRescale(rescaleIntercept, rescaleSlope, frame); |
|
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Support detection of windowing and rescale in Philips multiframe images
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|
1002 dicom->GetDefaultWindowing(windowCenter, windowWidth, frame); |
|
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Support detection of windowing and rescale in Philips multiframe images
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changeset
|
1003 |
|
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changeset
|
1004 unsigned int argWidth, argHeight; |
|
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|
1005 bool smooth; |
|
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|
1006 GetUserArguments(windowWidth, windowCenter, argWidth, argHeight, smooth, call); |
|
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changeset
|
1007 |
|
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|
1008 unsigned int targetWidth = decoded->GetWidth(); |
|
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changeset
|
1009 unsigned int targetHeight = decoded->GetHeight(); |
| 3686 | 1010 |
| 1011 if (decoded->GetWidth() != 0 && | |
| 1012 decoded->GetHeight() != 0) | |
| 1013 { | |
| 1014 float ratio = 1; | |
| 1015 | |
|
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|
1016 if (argWidth != 0 && |
|
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|
1017 argHeight != 0) |
| 3686 | 1018 { |
|
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|
1019 float ratioX = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
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|
1020 float ratioY = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
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|
1021 ratio = std::min(ratioX, ratioY); |
| 3686 | 1022 } |
|
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|
1023 else if (argWidth != 0) |
| 3686 | 1024 { |
|
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1025 ratio = static_cast<float>(argWidth) / static_cast<float>(decoded->GetWidth()); |
| 3686 | 1026 } |
|
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changeset
|
1027 else if (argHeight != 0) |
|
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|
1028 { |
|
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changeset
|
1029 ratio = static_cast<float>(argHeight) / static_cast<float>(decoded->GetHeight()); |
|
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|
1030 } |
|
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changeset
|
1031 |
|
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changeset
|
1032 targetWidth = boost::math::iround(ratio * static_cast<float>(decoded->GetWidth())); |
|
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|
1033 targetHeight = boost::math::iround(ratio * static_cast<float>(decoded->GetHeight())); |
| 3686 | 1034 } |
| 1035 | |
|
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|
1036 if (decoded->GetFormat() == PixelFormat_RGB24) |
|
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|
1037 { |
|
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|
1038 if (targetWidth == decoded->GetWidth() && |
|
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changeset
|
1039 targetHeight == decoded->GetHeight()) |
|
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|
1040 { |
|
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changeset
|
1041 DefaultHandler(call, decoded, ImageExtractionMode_Preview, false); |
|
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|
1042 } |
|
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|
1043 else |
|
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changeset
|
1044 { |
|
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|
1045 std::unique_ptr<ImageAccessor> resized( |
|
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changeset
|
1046 new Image(decoded->GetFormat(), targetWidth, targetHeight, false)); |
|
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changeset
|
1047 |
|
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changeset
|
1048 if (smooth && |
|
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changeset
|
1049 (targetWidth < decoded->GetWidth() || |
|
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changeset
|
1050 targetHeight < decoded->GetHeight())) |
|
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changeset
|
1051 { |
|
4065
d6362b2c4b61
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1052 ImageProcessing::SmoothGaussian5x5(*decoded, false /* be fast, don't round */); |
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1053 } |
|
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1054 |
|
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1055 ImageProcessing::Resize(*resized, *decoded); |
|
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1056 DefaultHandler(call, resized, ImageExtractionMode_Preview, false); |
|
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1057 } |
|
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1058 } |
| 3686 | 1059 else |
| 1060 { | |
|
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1061 // Grayscale image: (1) convert to Float32, (2) apply |
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1062 // windowing to get a Grayscale8, (3) possibly resize |
|
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1063 |
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1064 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
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1065 ImageProcessing::Convert(converted, *decoded); |
|
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1066 |
|
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1067 // Avoid divisions by zero |
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1068 if (windowWidth <= 1.0f) |
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1069 { |
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1070 windowWidth = 1; |
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1071 } |
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1072 |
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1073 if (std::abs(rescaleSlope) <= 0.0001) |
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1074 { |
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1075 rescaleSlope = 0.0001; |
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1076 } |
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1077 |
|
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1078 const double scaling = 255.0 * rescaleSlope / windowWidth; |
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1079 const double offset = (rescaleIntercept - windowCenter + windowWidth / 2.0) / rescaleSlope; |
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1080 |
|
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1081 std::unique_ptr<ImageAccessor> rescaled(new Image(PixelFormat_Grayscale8, decoded->GetWidth(), decoded->GetHeight(), false)); |
|
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1082 ImageProcessing::ShiftScale(*rescaled, converted, static_cast<float>(offset), static_cast<float>(scaling), false); |
|
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1083 |
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1084 if (targetWidth == decoded->GetWidth() && |
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1085 targetHeight == decoded->GetHeight()) |
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1086 { |
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1087 DefaultHandler(call, rescaled, ImageExtractionMode_UInt8, invert); |
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1088 } |
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1089 else |
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1090 { |
|
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1091 std::unique_ptr<ImageAccessor> resized( |
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1092 new Image(PixelFormat_Grayscale8, targetWidth, targetHeight, false)); |
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1093 |
|
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1094 if (smooth && |
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1095 (targetWidth < decoded->GetWidth() || |
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1096 targetHeight < decoded->GetHeight())) |
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1097 { |
|
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1098 ImageProcessing::SmoothGaussian5x5(*rescaled, false /* be fast, don't round */); |
|
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1099 } |
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1100 |
|
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1101 ImageProcessing::Resize(*resized, *rescaled); |
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1102 DefaultHandler(call, resized, ImageExtractionMode_UInt8, invert); |
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1103 } |
| 3686 | 1104 } |
|
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1105 } |
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1106 |
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1107 virtual bool RequiresDicomTags() const ORTHANC_OVERRIDE |
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1108 { |
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1109 return true; |
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1110 } |
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1111 }; |
|
3600
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1112 } |
|
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1113 |
|
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1114 |
|
751
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1115 template <enum ImageExtractionMode mode> |
| 974 | 1116 static void GetImage(RestApiGetCall& call) |
|
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1117 { |
|
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1118 Semaphore::Locker locker(throttlingSemaphore_); |
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1119 |
|
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1120 GetImageHandler handler(mode); |
|
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1121 IDecodedFrameHandler::Apply(call, handler, mode, false /* not rendered */); |
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1122 } |
|
1906
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1123 |
|
1826
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1124 |
|
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1125 static void GetRenderedFrame(RestApiGetCall& call) |
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1126 { |
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1127 Semaphore::Locker locker(throttlingSemaphore_); |
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1128 |
|
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|
1129 RenderedFrameHandler handler; |
|
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1130 IDecodedFrameHandler::Apply(call, handler, ImageExtractionMode_Preview /* arbitrary value */, true); |
|
751
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1131 } |
|
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1132 |
|
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1133 |
|
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1134 static void DocumentSharedNumpy(RestApiGetCall& call) |
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1135 { |
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1136 call.GetDocumentation() |
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1137 .SetUriArgument("id", "Orthanc identifier of the DICOM resource of interest") |
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1138 .SetHttpGetArgument("compress", RestApiCallDocumentation::Type_Boolean, "Compress the file as `.npz`", false) |
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1139 .SetHttpGetArgument("rescale", RestApiCallDocumentation::Type_Boolean, |
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1140 "On grayscale images, apply the rescaling and return floating-point values", false) |
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1141 .AddAnswerType(MimeType_PlainText, "Numpy file: https://numpy.org/devdocs/reference/generated/numpy.lib.format.html"); |
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1142 } |
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1143 |
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1144 |
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1145 namespace |
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1146 { |
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1147 class NumpyVisitor : public boost::noncopyable |
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1148 { |
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1149 private: |
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1150 bool rescale_; |
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1151 unsigned int depth_; |
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1152 unsigned int currentDepth_; |
| 4858 | 1153 unsigned int width_; |
|
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1154 unsigned int height_; |
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1155 PixelFormat format_; |
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1156 ChunkedBuffer buffer_; |
|
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1157 |
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1158 public: |
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1159 NumpyVisitor(unsigned int depth /* can be zero if 2D frame */, |
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1160 bool rescale) : |
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1161 rescale_(rescale), |
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1162 depth_(depth), |
| 4858 | 1163 currentDepth_(0), |
| 1164 width_(0), // dummy initialization | |
| 1165 height_(0), // dummy initialization | |
| 1166 format_(PixelFormat_Grayscale8) // dummy initialization | |
|
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1167 { |
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1168 } |
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1169 |
| 4858 | 1170 void WriteFrame(const ParsedDicomFile& dicom, |
|
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1171 unsigned int frame) |
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1172 { |
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1173 std::unique_ptr<ImageAccessor> decoded(dicom.DecodeFrame(frame)); |
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1174 |
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1175 if (decoded.get() == NULL) |
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1176 { |
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1177 throw OrthancException(ErrorCode_NotImplemented, "Cannot decode DICOM instance"); |
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1178 } |
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1179 |
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1180 if (currentDepth_ == 0) |
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1181 { |
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1182 width_ = decoded->GetWidth(); |
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1183 height_ = decoded->GetHeight(); |
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1184 format_ = decoded->GetFormat(); |
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1185 } |
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1186 else if (width_ != decoded->GetWidth() || |
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1187 height_ != decoded->GetHeight()) |
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1188 { |
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1189 throw OrthancException(ErrorCode_IncompatibleImageSize, "The size of the frames varies across the instance(s)"); |
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1190 } |
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1191 else if (format_ != decoded->GetFormat()) |
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1192 { |
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1193 throw OrthancException(ErrorCode_IncompatibleImageFormat, "The pixel format of the frames varies across the instance(s)"); |
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1194 } |
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1195 |
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1196 if (rescale_ && |
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1197 decoded->GetFormat() != PixelFormat_RGB24) |
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1198 { |
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1199 if (currentDepth_ == 0) |
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1200 { |
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1201 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, PixelFormat_Float32); |
|
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1202 } |
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1203 |
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1204 double rescaleIntercept, rescaleSlope; |
|
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1205 dicom.GetRescale(rescaleIntercept, rescaleSlope, frame); |
|
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1206 |
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1207 Image converted(PixelFormat_Float32, decoded->GetWidth(), decoded->GetHeight(), false); |
|
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1208 ImageProcessing::Convert(converted, *decoded); |
|
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1209 ImageProcessing::ShiftScale2(converted, static_cast<float>(rescaleIntercept), static_cast<float>(rescaleSlope), false); |
|
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1210 |
|
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1211 NumpyWriter::WritePixels(buffer_, converted); |
|
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1212 } |
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1213 else |
|
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1214 { |
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1215 if (currentDepth_ == 0) |
|
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1216 { |
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1217 NumpyWriter::WriteHeader(buffer_, depth_, width_, height_, format_); |
|
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1218 } |
|
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1219 |
|
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|
1220 NumpyWriter::WritePixels(buffer_, *decoded); |
|
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1221 } |
|
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1222 |
|
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|
1223 currentDepth_ ++; |
|
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1224 } |
|
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|
1225 |
|
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|
1226 void Answer(RestApiOutput& output, |
|
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1227 bool compress) |
|
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1228 { |
|
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1229 if ((depth_ == 0 && currentDepth_ != 1) || |
|
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|
1230 (depth_ != 0 && currentDepth_ != depth_)) |
|
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1231 { |
|
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|
1232 throw OrthancException(ErrorCode_BadSequenceOfCalls); |
|
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1233 } |
|
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1234 else |
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1235 { |
|
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|
1236 std::string answer; |
|
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|
1237 NumpyWriter::Finalize(answer, buffer_, compress); |
|
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|
1238 output.AnswerBuffer(answer, MimeType_Binary); |
|
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1239 } |
|
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1240 } |
|
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|
1241 }; |
|
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1242 } |
|
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1243 |
|
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1244 |
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|
1245 static void GetNumpyFrame(RestApiGetCall& call) |
|
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1246 { |
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|
1247 if (call.IsDocumentation()) |
|
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1248 { |
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|
1249 DocumentSharedNumpy(call); |
|
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1250 call.GetDocumentation() |
|
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1251 .SetTag("Instances") |
|
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1252 .SetSummary("Decode frame for numpy") |
|
4836
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|
1253 .SetDescription("Decode one frame of interest from the given DICOM instance, for use with numpy in Python. " |
|
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1254 "The numpy array has 3 dimensions: (height, width, color channel).") |
|
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1255 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
|
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1256 } |
|
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1257 else |
|
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1258 { |
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|
1259 const std::string instanceId = call.GetUriComponent("id", ""); |
|
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|
1260 const bool compress = call.GetBooleanArgument("compress", false); |
|
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|
1261 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
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|
1262 |
|
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|
1263 uint32_t frame; |
|
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|
1264 if (!SerializationToolbox::ParseUnsignedInteger32(frame, call.GetUriComponent("frame", "0"))) |
|
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1265 { |
|
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|
1266 throw OrthancException(ErrorCode_ParameterOutOfRange, "Expected an unsigned integer for the \"frame\" argument"); |
|
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1267 } |
|
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|
1268 |
|
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|
1269 NumpyVisitor visitor(0 /* no depth, 2D frame */, rescale); |
|
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|
1270 |
|
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|
1271 { |
|
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|
1272 Semaphore::Locker throttling(throttlingSemaphore_); |
|
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|
1273 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
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1274 |
|
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|
1275 visitor.WriteFrame(locker.GetDicom(), frame); |
|
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1276 } |
|
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|
1277 |
|
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|
1278 visitor.Answer(call.GetOutput(), compress); |
|
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1279 } |
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1280 } |
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1281 |
|
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1282 |
|
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|
1283 static void GetNumpyInstance(RestApiGetCall& call) |
|
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1284 { |
|
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1285 if (call.IsDocumentation()) |
|
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1286 { |
|
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1287 DocumentSharedNumpy(call); |
|
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1288 call.GetDocumentation() |
|
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|
1289 .SetTag("Instances") |
|
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|
1290 .SetSummary("Decode instance for numpy") |
|
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|
1291 .SetDescription("Decode the given DICOM instance, for use with numpy in Python. " |
|
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|
1292 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
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1293 } |
|
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1294 else |
|
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1295 { |
|
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1296 const std::string instanceId = call.GetUriComponent("id", ""); |
|
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|
1297 const bool compress = call.GetBooleanArgument("compress", false); |
|
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1298 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
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1299 |
|
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1300 { |
|
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1301 Semaphore::Locker throttling(throttlingSemaphore_); |
|
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|
1302 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), instanceId); |
|
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1303 |
|
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|
1304 const unsigned int depth = locker.GetDicom().GetFramesCount(); |
|
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|
1305 if (depth == 0) |
|
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1306 { |
|
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1307 throw OrthancException(ErrorCode_BadFileFormat, "Empty DICOM instance"); |
|
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1308 } |
|
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1309 |
|
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|
1310 NumpyVisitor visitor(depth, rescale); |
|
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|
1311 |
|
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|
1312 for (unsigned int frame = 0; frame < depth; frame++) |
|
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1313 { |
|
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|
1314 visitor.WriteFrame(locker.GetDicom(), frame); |
|
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1315 } |
|
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1316 |
|
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|
1317 visitor.Answer(call.GetOutput(), compress); |
|
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1318 } |
|
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1319 } |
|
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1320 } |
|
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|
1321 |
|
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|
1322 |
|
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|
1323 static void GetNumpySeries(RestApiGetCall& call) |
|
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1324 { |
|
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1325 if (call.IsDocumentation()) |
|
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1326 { |
|
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|
1327 DocumentSharedNumpy(call); |
|
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|
1328 call.GetDocumentation() |
|
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1329 .SetTag("Series") |
|
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|
1330 .SetSummary("Decode series for numpy") |
|
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1331 .SetDescription("Decode the given DICOM series, for use with numpy in Python. " |
|
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|
1332 "The numpy array has 4 dimensions: (frame, height, width, color channel)."); |
|
4834
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1333 } |
|
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1334 else |
|
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1335 { |
|
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|
1336 const std::string seriesId = call.GetUriComponent("id", ""); |
|
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1337 const bool compress = call.GetBooleanArgument("compress", false); |
|
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|
1338 const bool rescale = call.GetBooleanArgument("rescale", true); |
|
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1339 |
|
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|
1340 Semaphore::Locker throttling(throttlingSemaphore_); |
|
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|
1341 |
|
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|
1342 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
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|
1343 SliceOrdering ordering(index, seriesId); |
|
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|
1344 |
|
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|
1345 unsigned int depth = 0; |
|
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1346 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
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|
1347 { |
|
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|
1348 depth += ordering.GetFramesCount(i); |
|
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1349 } |
|
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|
1350 |
|
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|
1351 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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download of numpy arrays from the REST API
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|
1352 |
|
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changeset
|
1353 NumpyVisitor visitor(depth, rescale); |
|
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|
1354 |
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|
1355 for (size_t i = 0; i < ordering.GetInstancesCount(); i++) |
|
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|
1356 { |
|
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|
1357 const std::string& instanceId = ordering.GetInstanceId(i); |
|
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|
1358 unsigned int framesCount = ordering.GetFramesCount(i); |
|
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|
1359 |
|
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|
1360 { |
|
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|
1361 ServerContext::DicomCacheLocker locker(context, instanceId); |
|
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|
1362 |
|
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|
1363 for (unsigned int frame = 0; frame < framesCount; frame++) |
|
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|
1364 { |
|
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|
1365 visitor.WriteFrame(locker.GetDicom(), frame); |
|
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|
1366 } |
|
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|
1367 } |
|
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1368 } |
|
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|
1369 |
|
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|
1370 visitor.Answer(call.GetOutput(), compress); |
|
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|
1371 } |
|
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|
1372 } |
|
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|
1373 |
|
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|
1374 |
| 974 | 1375 static void GetMatlabImage(RestApiGetCall& call) |
|
874
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|
1376 { |
| 4414 | 1377 if (call.IsDocumentation()) |
| 1378 { | |
| 1379 std::string description; | |
| 1380 | |
| 1381 if (call.HasUriComponent("frame")) | |
| 1382 { | |
| 1383 description = "Decode one frame of interest from the given DICOM instance"; | |
| 1384 call.GetDocumentation() | |
| 1385 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); | |
| 1386 } | |
| 1387 else | |
| 1388 { | |
| 1389 description = "Decode the first frame of the given DICOM instance."; | |
| 1390 } | |
| 1391 | |
| 1392 call.GetDocumentation() | |
| 1393 .SetTag("Instances") | |
| 1394 .SetSummary("Decode frame for Matlab") | |
| 1395 .SetDescription(description + ", and export this frame as a Octave/Matlab matrix to be imported with `eval()`: " | |
| 1396 "https://book.orthanc-server.com/faq/matlab.html") | |
| 1397 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 1398 .AddAnswerType(MimeType_PlainText, "Octave/Matlab matrix"); | |
| 1399 return; | |
| 1400 } | |
| 1401 | |
|
3926
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|
1402 Semaphore::Locker locker(throttlingSemaphore_); |
|
2910b0d30fe0
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|
1403 |
|
874
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changeset
|
1404 ServerContext& context = OrthancRestApi::GetContext(call); |
|
87791ebc1f50
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changeset
|
1405 |
|
87791ebc1f50
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diff
changeset
|
1406 std::string frameId = call.GetUriComponent("frame", "0"); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
1407 |
|
87791ebc1f50
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diff
changeset
|
1408 unsigned int frame; |
|
87791ebc1f50
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diff
changeset
|
1409 try |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1410 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1411 frame = boost::lexical_cast<unsigned int>(frameId); |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1412 } |
|
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2804
diff
changeset
|
1413 catch (boost::bad_lexical_cast&) |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1414 { |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1415 return; |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1416 } |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1417 |
|
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1418 std::string publicId = call.GetUriComponent("id", ""); |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1419 std::unique_ptr<ImageAccessor> decoded(context.DecodeDicomFrame(publicId, frame)); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1420 |
|
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1421 if (decoded.get() == NULL) |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1422 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1423 throw OrthancException(ErrorCode_NotImplemented, |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1424 "Cannot decode DICOM instance with ID: " + publicId); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1425 } |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1426 else |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3926
diff
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|
1427 { |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1428 std::string result; |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1429 decoded->ToMatlabString(result); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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3926
diff
changeset
|
1430 call.GetOutput().AnswerBuffer(result, MimeType_PlainText); |
|
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1431 } |
|
874
87791ebc1f50
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diff
changeset
|
1432 } |
|
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1433 |
|
87791ebc1f50
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
1434 |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
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2382
diff
changeset
|
1435 template <bool GzipCompression> |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1436 static void GetRawFrame(RestApiGetCall& call) |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1437 { |
| 4408 | 1438 if (call.IsDocumentation()) |
| 1439 { | |
| 1440 call.GetDocumentation() | |
| 1441 .SetTag("Instances") | |
| 1442 .SetSummary("Access raw frame" + std::string(GzipCompression ? " (compressed)" : "")) | |
| 1443 .SetDescription("Access the raw content of one individual frame of the DICOM instance of interest, " | |
| 1444 "bypassing image decoding. This is notably useful to access the source files " | |
| 1445 "in compressed transfer syntaxes." + | |
| 1446 std::string(GzipCompression ? " The image is compressed using gzip" : "")) | |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
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4422
diff
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|
1447 .SetUriArgument("id", "Orthanc identifier of the instance of interest") |
| 4408 | 1448 .SetUriArgument("frame", RestApiCallDocumentation::Type_Number, "Index of the frame (starts at `0`)"); |
| 1449 | |
| 1450 if (GzipCompression) | |
| 1451 { | |
| 1452 call.GetDocumentation().AddAnswerType(MimeType_Gzip, "The raw frame, compressed using gzip"); | |
| 1453 } | |
| 1454 else | |
| 1455 { | |
| 1456 call.GetDocumentation().AddAnswerType(MimeType_Binary, "The raw frame"); | |
| 1457 } | |
| 1458 return; | |
| 1459 } | |
| 1460 | |
|
1924
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1461 std::string frameId = call.GetUriComponent("frame", "0"); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1462 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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1906
diff
changeset
|
1463 unsigned int frame; |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1464 try |
|
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1465 { |
|
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1466 frame = boost::lexical_cast<unsigned int>(frameId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1467 } |
|
2836
7133ad478eea
fix Debian warnings
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1468 catch (boost::bad_lexical_cast&) |
|
1924
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1469 { |
|
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1470 return; |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1471 } |
|
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1472 |
|
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diff
changeset
|
1473 std::string publicId = call.GetUriComponent("id", ""); |
|
2908
9d277f8ad698
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2905
diff
changeset
|
1474 std::string raw; |
|
9d277f8ad698
new enumeration: MimeType
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diff
changeset
|
1475 MimeType mime; |
|
1924
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1476 |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1477 { |
|
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1478 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), publicId); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1479 locker.GetDicom().GetRawFrame(raw, mime, frame); |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1480 } |
|
6c73df12ca51
New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
changeset
|
1481 |
|
2408
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New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1482 if (GzipCompression) |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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changeset
|
1483 { |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1484 GzipCompressor gzip; |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1485 std::string compressed; |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1486 gzip.Compress(compressed, raw.empty() ? NULL : raw.c_str(), raw.size()); |
|
2908
9d277f8ad698
new enumeration: MimeType
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diff
changeset
|
1487 call.GetOutput().AnswerBuffer(compressed, MimeType_Gzip); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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|
1488 } |
|
26a0cc24d48d
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changeset
|
1489 else |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1490 { |
|
26a0cc24d48d
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diff
changeset
|
1491 call.GetOutput().AnswerBuffer(raw, mime); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
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diff
changeset
|
1492 } |
|
1924
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New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding)
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diff
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|
1493 } |
|
6c73df12ca51
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diff
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|
1494 |
|
6c73df12ca51
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|
1495 |
| 974 | 1496 static void GetResourceStatistics(RestApiGetCall& call) |
|
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|
1497 { |
| 4418 | 1498 if (call.IsDocumentation()) |
| 1499 { | |
| 1500 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1501 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1502 call.GetDocumentation() | |
| 1503 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1504 .SetSummary("Get " + r + " statistics") | |
| 1505 .SetDescription("Get statistics about the given " + r) | |
| 1506 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1507 .SetAnswerField("DiskSize", RestApiCallDocumentation::Type_String, | |
| 1508 "Size of the " + r + " on the disk in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1509 .SetAnswerField("DiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1510 "Size of the " + r + " on the disk, expressed in megabytes (MB)") | |
| 1511 .SetAnswerField("UncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1512 "Size of the " + r + " after decompression in bytes, expressed as a string for 64bit compatibility with JSON") | |
| 1513 .SetAnswerField("UncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1514 "Size of the " + r + " after decompression, expressed in megabytes (MB). " | |
| 1515 "This is different from `DiskSizeMB` iff `StorageCompression` is `true`.") | |
| 1516 .SetAnswerField("DicomDiskSize", RestApiCallDocumentation::Type_String, | |
| 1517 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1518 .SetAnswerField("DicomDiskSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1519 "Size on the disk of the DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1520 .SetAnswerField("DicomUncompressedSize", RestApiCallDocumentation::Type_String, | |
| 1521 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in bytes") | |
| 1522 .SetAnswerField("DicomUncompressedSizeMB", RestApiCallDocumentation::Type_Number, | |
| 1523 "Size on the disk of the uncompressed DICOM instances associated with the " + r + ", expressed in megabytes (MB)") | |
| 1524 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/statistics", true); | |
| 1525 | |
| 1526 switch (t) | |
| 1527 { | |
| 1528 // Do NOT add "break" below this point! | |
| 1529 case ResourceType_Patient: | |
| 1530 call.GetDocumentation().SetAnswerField("CountStudies", RestApiCallDocumentation::Type_Number, | |
| 1531 "Number of child studies within this " + r); | |
| 1532 | |
| 1533 case ResourceType_Study: | |
| 1534 call.GetDocumentation().SetAnswerField("CountSeries", RestApiCallDocumentation::Type_Number, | |
| 1535 "Number of child series within this " + r); | |
| 1536 | |
| 1537 case ResourceType_Series: | |
| 1538 call.GetDocumentation().SetAnswerField("CountInstances", RestApiCallDocumentation::Type_Number, | |
| 1539 "Number of child instances within this " + r); | |
| 1540 | |
| 1541 case ResourceType_Instance: | |
| 1542 default: | |
| 1543 break; | |
| 1544 } | |
| 1545 | |
| 1546 return; | |
| 1547 } | |
| 1548 | |
|
3174
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|
1549 static const uint64_t MEGA_BYTES = 1024 * 1024; |
|
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|
1550 |
|
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|
1551 std::string publicId = call.GetUriComponent("id", ""); |
|
3174
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|
1552 |
|
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|
1553 ResourceType type; |
|
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|
1554 uint64_t diskSize, uncompressedSize, dicomDiskSize, dicomUncompressedSize; |
|
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|
1555 unsigned int countStudies, countSeries, countInstances; |
|
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|
1556 OrthancRestApi::GetIndex(call).GetResourceStatistics( |
|
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|
1557 type, diskSize, uncompressedSize, countStudies, countSeries, |
|
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|
1558 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); |
|
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|
1559 |
|
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|
1560 Json::Value result = Json::objectValue; |
|
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|
1561 result["DiskSize"] = boost::lexical_cast<std::string>(diskSize); |
|
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|
1562 result["DiskSizeMB"] = static_cast<unsigned int>(diskSize / MEGA_BYTES); |
|
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|
1563 result["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize); |
|
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|
1564 result["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES); |
|
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1565 |
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1566 result["DicomDiskSize"] = boost::lexical_cast<std::string>(dicomDiskSize); |
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1567 result["DicomDiskSizeMB"] = static_cast<unsigned int>(dicomDiskSize / MEGA_BYTES); |
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1568 result["DicomUncompressedSize"] = boost::lexical_cast<std::string>(dicomUncompressedSize); |
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1569 result["DicomUncompressedSizeMB"] = static_cast<unsigned int>(dicomUncompressedSize / MEGA_BYTES); |
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1570 |
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1571 switch (type) |
|
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1572 { |
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1573 // Do NOT add "break" below this point! |
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1574 case ResourceType_Patient: |
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1575 result["CountStudies"] = countStudies; |
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1576 |
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1577 case ResourceType_Study: |
|
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1578 result["CountSeries"] = countSeries; |
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1579 |
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1580 case ResourceType_Series: |
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1581 result["CountInstances"] = countInstances; |
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1582 |
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|
1583 case ResourceType_Instance: |
|
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1584 default: |
|
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|
1585 break; |
|
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1586 } |
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|
1587 |
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|
1588 call.GetOutput().AnswerJson(result); |
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1589 } |
|
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|
1590 |
|
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|
1591 |
|
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|
1592 |
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|
1593 // Handling of metadata ----------------------------------------------------- |
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1594 |
| 4205 | 1595 static void CheckValidResourceType(const RestApiCall& call) |
|
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1596 { |
|
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1597 assert(!call.GetFullUri().empty()); |
| 4409 | 1598 const std::string resourceType = call.GetFullUri() [0]; |
|
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1599 StringToResourceType(resourceType.c_str()); |
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1600 } |
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|
1601 |
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1602 |
| 974 | 1603 static void ListMetadata(RestApiGetCall& call) |
|
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1604 { |
| 4414 | 1605 if (call.IsDocumentation()) |
| 1606 { | |
| 1607 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1608 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1609 call.GetDocumentation() | |
| 1610 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1611 .SetSummary("List metadata") | |
| 1612 .SetDescription("Get the list of metadata that are associated with the given " + r) | |
| 1613 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1614 .SetHttpGetArgument("expand", RestApiCallDocumentation::Type_String, | |
| 1615 "If present, also retrieve the value of the individual metadata", false) | |
| 1616 .AddAnswerType(MimeType_Json, "JSON array containing the names of the available metadata, " | |
| 1617 "or JSON associative array mapping metadata to their values (if `expand` argument is provided)") | |
| 1618 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/metadata", true); | |
| 1619 return; | |
| 1620 } | |
| 1621 | |
|
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|
1622 assert(!call.GetFullUri().empty()); |
| 4554 | 1623 const std::string publicId = call.GetUriComponent("id", ""); |
| 1624 ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); | |
|
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1625 |
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1626 typedef std::map<MetadataType, std::string> Metadata; |
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1627 |
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1628 Metadata metadata; |
| 4554 | 1629 OrthancRestApi::GetIndex(call).GetAllMetadata(metadata, publicId, level); |
|
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1630 |
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|
1631 Json::Value result; |
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1632 |
|
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|
1633 if (call.HasArgument("expand")) |
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1634 { |
|
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|
1635 result = Json::objectValue; |
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|
1636 |
|
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1637 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
|
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1638 { |
|
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1639 std::string key = EnumerationToString(it->first); |
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1640 result[key] = it->second; |
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1641 } |
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1642 } |
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1643 else |
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1644 { |
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|
1645 result = Json::arrayValue; |
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|
1646 |
|
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|
1647 for (Metadata::const_iterator it = metadata.begin(); it != metadata.end(); ++it) |
|
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1648 { |
|
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|
1649 result.append(EnumerationToString(it->first)); |
|
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1650 } |
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|
1651 } |
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|
1652 |
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|
1653 call.GetOutput().AnswerJson(result); |
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1654 } |
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|
1655 |
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|
1656 |
| 4657 | 1657 static void SetStringContentETag(const RestApiOutput& output, |
| 1658 int64_t revision, | |
| 1659 const std::string& value) | |
|
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|
1660 { |
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|
1661 std::string md5; |
|
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|
1662 Toolbox::ComputeMD5(md5, value); |
|
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|
1663 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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|
1664 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1665 } |
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1666 |
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1667 |
| 4657 | 1668 static void SetBufferContentETag(const RestApiOutput& output, |
|
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|
1669 int64_t revision, |
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|
1670 const void* data, |
|
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1671 size_t size) |
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1672 { |
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|
1673 std::string md5; |
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|
1674 Toolbox::ComputeMD5(md5, data, size); |
|
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|
1675 const std::string etag = "\"" + boost::lexical_cast<std::string>(revision) + "-" + md5 + "\""; |
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|
1676 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1677 } |
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1678 |
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1679 |
| 4657 | 1680 static void SetAttachmentETag(const RestApiOutput& output, |
|
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1681 int64_t revision, |
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|
1682 const FileInfo& info) |
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1683 { |
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|
1684 const std::string etag = ("\"" + boost::lexical_cast<std::string>(revision) + "-" + |
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|
1685 info.GetUncompressedMD5() + "\""); |
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|
1686 output.GetLowLevelOutput().AddHeader("ETag", etag); |
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1687 } |
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|
1688 |
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|
1689 |
|
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1690 static std::string GetMD5(const std::string& value) |
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1691 { |
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1692 std::string md5; |
|
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1693 Toolbox::ComputeMD5(md5, value); |
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1694 return md5; |
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1695 } |
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1696 |
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1697 |
|
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1698 static bool GetRevisionHeader(int64_t& revision /* out */, |
|
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1699 std::string& md5 /* out */, |
|
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1700 const RestApiCall& call, |
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1701 const std::string& header) |
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1702 { |
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1703 std::string lower; |
|
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1704 Toolbox::ToLowerCase(lower, header); |
|
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1705 |
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1706 HttpToolbox::Arguments::const_iterator found = call.GetHttpHeaders().find(lower); |
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1707 if (found == call.GetHttpHeaders().end()) |
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1708 { |
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1709 return false; |
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1710 } |
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1711 else |
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1712 { |
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1713 std::string value = Toolbox::StripSpaces(found->second); |
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1714 Toolbox::RemoveSurroundingQuotes(value); |
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1715 |
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1716 try |
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1717 { |
|
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1718 size_t comma = value.find('-'); |
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1719 if (comma != std::string::npos) |
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1720 { |
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1721 revision = boost::lexical_cast<int64_t>(value.substr(0, comma)); |
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1722 md5 = value.substr(comma + 1); |
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1723 return true; |
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1724 } |
|
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1725 } |
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1726 catch (boost::bad_lexical_cast&) |
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1727 { |
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1728 } |
|
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1729 |
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1730 throw OrthancException(ErrorCode_ParameterOutOfRange, "The \"" + header + |
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1731 "\" HTTP header should contain the ETag (revision followed by MD5 hash), but found: " + value); |
|
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1732 } |
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1733 } |
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1734 |
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1735 |
| 974 | 1736 static void GetMetadata(RestApiGetCall& call) |
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1737 { |
| 4414 | 1738 if (call.IsDocumentation()) |
| 1739 { | |
| 1740 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1741 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1742 call.GetDocumentation() | |
| 1743 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1744 .SetSummary("Get metadata") | |
| 1745 .SetDescription("Get the value of a metadata that is associated with the given " + r) | |
| 1746 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1747 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
|
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1748 .AddAnswerType(MimeType_PlainText, "Value of the metadata") |
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1749 .SetAnswerHeader("ETag", "Revision of the metadata, to be used in further `PUT` or `DELETE` operations") |
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1750 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4414 | 1751 return; |
| 1752 } | |
| 1753 | |
|
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1754 assert(!call.GetFullUri().empty()); |
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1755 const std::string publicId = call.GetUriComponent("id", ""); |
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1756 const ResourceType level = StringToResourceType(call.GetFullUri() [0].c_str()); |
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1757 |
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1758 std::string name = call.GetUriComponent("name", ""); |
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1759 MetadataType metadata = StringToMetadata(name); |
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1760 |
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1761 std::string value; |
|
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1762 int64_t revision; |
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1763 if (OrthancRestApi::GetIndex(call).LookupMetadata(value, revision, publicId, level, metadata)) |
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1764 { |
|
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1765 SetStringContentETag(call.GetOutput(), revision, value); // New in Orthanc 1.9.2 |
|
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1766 |
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1767 int64_t userRevision; |
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1768 std::string userMD5; |
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1769 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
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1770 userRevision == revision && |
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1771 userMD5 == GetMD5(value)) |
|
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1772 { |
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1773 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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1774 } |
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1775 else |
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1776 { |
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1777 call.GetOutput().AnswerBuffer(value, MimeType_PlainText); |
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1778 } |
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1779 } |
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1780 } |
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1781 |
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1782 |
| 974 | 1783 static void DeleteMetadata(RestApiDeleteCall& call) |
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1784 { |
| 4414 | 1785 if (call.IsDocumentation()) |
| 1786 { | |
| 1787 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1788 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1789 call.GetDocumentation() | |
| 1790 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1791 .SetSummary("Delete metadata") | |
| 1792 .SetDescription("Delete some metadata associated with the given DICOM " + r + | |
| 1793 ". This call will fail if trying to delete a system metadata (i.e. whose index is < 1024).") | |
| 1794 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
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1795 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") |
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1796 .SetHttpHeader("If-Match", "Revision of the metadata, to check if its content has not changed and can " |
|
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1797 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4414 | 1798 return; |
| 1799 } | |
| 1800 | |
|
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1801 CheckValidResourceType(call); |
|
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1802 const std::string publicId = call.GetUriComponent("id", ""); |
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1803 |
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1804 std::string name = call.GetUriComponent("name", ""); |
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1805 MetadataType metadata = StringToMetadata(name); |
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1806 |
|
1773
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1807 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
|
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1808 { |
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1809 bool found; |
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1810 int64_t revision; |
|
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1811 std::string md5; |
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1812 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
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1813 { |
|
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1814 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, true, revision, md5); |
|
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1815 } |
|
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1816 else |
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1817 { |
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1818 OrthancConfiguration::ReaderLock lock; |
|
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1819 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
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1820 { |
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|
1821 throw OrthancException(ErrorCode_Revision, |
|
4661
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|
1822 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
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1823 } |
|
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1824 else |
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1825 { |
|
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1826 found = OrthancRestApi::GetIndex(call).DeleteMetadata(publicId, metadata, false, -1 /* dummy value */, ""); |
|
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1827 } |
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1828 } |
|
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1829 |
|
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1830 if (found) |
|
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1831 { |
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1832 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
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1833 } |
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1834 else |
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1835 { |
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1836 throw OrthancException(ErrorCode_UnknownResource); |
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1837 } |
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1838 } |
|
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1839 else |
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1840 { |
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1841 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1842 } |
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1843 } |
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1844 |
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1845 |
| 974 | 1846 static void SetMetadata(RestApiPutCall& call) |
|
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1847 { |
| 4414 | 1848 if (call.IsDocumentation()) |
| 1849 { | |
| 1850 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1851 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1852 call.GetDocumentation() | |
| 1853 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1854 .SetSummary("Set metadata") | |
| 1855 .SetDescription("Set the value of some metadata in the given DICOM " + r + | |
| 1856 ". This call will fail if trying to modify a system metadata (i.e. whose index is < 1024).") | |
| 1857 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 1858 .SetUriArgument("name", "The name of the metadata, or its index (cf. `UserMetadata` configuration option)") | |
|
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1859 .AddRequestType(MimeType_PlainText, "String value of the metadata") |
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1860 .SetHttpHeader("If-Match", "Revision of the metadata, if this is not the first time this metadata is set."); |
| 4414 | 1861 return; |
| 1862 } | |
| 1863 | |
|
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1864 CheckValidResourceType(call); |
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1865 |
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1866 std::string publicId = call.GetUriComponent("id", ""); |
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1867 std::string name = call.GetUriComponent("name", ""); |
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1868 MetadataType metadata = StringToMetadata(name); |
|
1446
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1869 |
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1870 std::string value; |
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1871 call.BodyToString(value); |
|
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1872 |
|
1773
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1873 if (IsUserMetadata(metadata)) // It is forbidden to modify internal metadata |
|
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1874 { |
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1875 int64_t oldRevision; |
|
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1876 std::string oldMD5; |
|
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1877 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
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1878 |
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1879 if (!hasOldRevision) |
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1880 { |
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1881 OrthancConfiguration::ReaderLock lock; |
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1882 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
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1883 { |
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1884 // "StatelessDatabaseOperations::SetMetadata()" will ignore |
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1885 // the actual value of "oldRevision" if the metadata is |
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1886 // inexistent as expected |
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1887 hasOldRevision = true; |
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1888 oldRevision = -1; // dummy value |
|
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1889 oldMD5.clear(); // dummy value |
|
4623
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1890 } |
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1891 } |
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1892 |
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1893 int64_t newRevision; |
|
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1894 OrthancRestApi::GetIndex(call).SetMetadata(newRevision, publicId, metadata, value, |
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1895 hasOldRevision, oldRevision, oldMD5); |
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1896 |
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1897 SetStringContentETag(call.GetOutput(), newRevision, value); // New in Orthanc 1.9.2 |
|
2908
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|
1898 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
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1899 } |
|
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1900 else |
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1901 { |
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1902 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
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1903 } |
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1904 } |
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1905 |
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1906 |
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1907 |
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1908 |
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1909 // Handling of attached files ----------------------------------------------- |
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1910 |
| 974 | 1911 static void ListAttachments(RestApiGetCall& call) |
|
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1912 { |
| 4409 | 1913 if (call.IsDocumentation()) |
| 1914 { | |
| 1915 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 1916 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 1917 call.GetDocumentation() | |
| 1918 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 1919 .SetSummary("List attachments") | |
| 1920 .SetDescription("Get the list of attachments that are associated with the given " + r) | |
| 1921 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
|
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1922 .SetHttpGetArgument("full", RestApiCallDocumentation::Type_String, |
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1923 "If present, retrieve the attachments list and their numerical ids", false) |
| 4409 | 1924 .AddAnswerType(MimeType_Json, "JSON array containing the names of the attachments") |
| 1925 .SetHttpGetSample(GetDocumentationSampleResource(t) + "/attachments", true); | |
| 1926 return; | |
| 1927 } | |
| 1928 | |
| 1929 const std::string resourceType = call.GetFullUri() [0]; | |
| 1930 const std::string publicId = call.GetUriComponent("id", ""); | |
|
4514
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1931 std::set<FileContentType> attachments; |
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1932 OrthancRestApi::GetIndex(call).ListAvailableAttachments(attachments, publicId, StringToResourceType(resourceType.c_str())); |
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1933 |
|
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1934 Json::Value result; |
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1935 |
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1936 if (call.HasArgument("full")) |
|
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1937 { |
|
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1938 result = Json::objectValue; |
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1939 |
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|
1940 for (std::set<FileContentType>::const_iterator |
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1941 it = attachments.begin(); it != attachments.end(); ++it) |
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1942 { |
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1943 std::string key = EnumerationToString(*it); |
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1944 result[key] = static_cast<uint16_t>(*it); |
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1945 } |
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1946 } |
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1947 else |
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|
1948 { |
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1949 result = Json::arrayValue; |
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1950 |
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1951 for (std::set<FileContentType>::const_iterator |
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1952 it = attachments.begin(); it != attachments.end(); ++it) |
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1953 { |
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1954 result.append(EnumerationToString(*it)); |
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1955 } |
|
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1956 } |
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1957 |
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1958 call.GetOutput().AnswerJson(result); |
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1959 } |
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1960 |
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1961 |
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1962 static void AddAttachmentDocumentation(RestApiGetCall& call, |
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1963 const std::string& resourceType) |
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1964 { |
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1965 call.GetDocumentation() |
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1966 .SetUriArgument("id", "Orthanc identifier of the " + resourceType + " of interest") |
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1967 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
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1968 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
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1969 .SetHttpHeader("If-None-Match", "Optional revision of the attachment, to check if its content has changed"); |
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1970 } |
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1971 |
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1972 |
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1973 static bool GetAttachmentInfo(FileInfo& info, |
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1974 RestApiGetCall& call) |
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1975 { |
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1976 CheckValidResourceType(call); |
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1977 |
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1978 const std::string publicId = call.GetUriComponent("id", ""); |
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1979 const std::string name = call.GetUriComponent("name", ""); |
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1980 FileContentType contentType = StringToContentType(name); |
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1981 |
|
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1982 int64_t revision; |
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1983 if (OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType)) |
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1984 { |
|
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1985 SetAttachmentETag(call.GetOutput(), revision, info); // New in Orthanc 1.9.2 |
|
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1986 |
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1987 int64_t userRevision; |
|
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1988 std::string userMD5; |
|
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1989 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
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1990 revision == userRevision && |
|
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1991 info.GetUncompressedMD5() == userMD5) |
|
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1992 { |
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1993 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
|
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1994 return false; |
|
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1995 } |
|
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1996 else |
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1997 { |
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1998 return true; |
|
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1999 } |
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2000 } |
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2001 else |
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2002 { |
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2003 throw OrthancException(ErrorCode_UnknownResource); |
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2004 } |
|
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2005 } |
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|
2006 |
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2007 |
| 974 | 2008 static void GetAttachmentOperations(RestApiGetCall& call) |
|
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2009 { |
| 4409 | 2010 if (call.IsDocumentation()) |
| 2011 { | |
| 2012 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2013 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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2014 AddAttachmentDocumentation(call, r); |
| 4409 | 2015 call.GetDocumentation() |
| 2016 .SetTag("Other") | |
| 4414 | 2017 .SetSummary("List operations on attachments") |
| 2018 .SetDescription("Get the list of the operations that are available for attachments associated with the given " + r) | |
| 4409 | 2019 .AddAnswerType(MimeType_Json, "List of the available operations") |
| 2020 .SetHttpGetSample("https://demo.orthanc-server.com/instances/d94d9a03-3003b047-a4affc69-322313b2-680530a2/attachments/dicom", true); | |
| 2021 return; | |
| 2022 } | |
| 2023 | |
|
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|
2024 FileInfo info; |
|
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|
2025 if (GetAttachmentInfo(info, call)) |
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|
2026 { |
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|
2027 Json::Value operations = Json::arrayValue; |
|
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|
2028 |
|
1700
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|
2029 operations.append("compress"); |
|
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|
2030 operations.append("compressed-data"); |
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|
2031 |
|
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|
2032 if (info.GetCompressedMD5() != "") |
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|
2033 { |
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|
2034 operations.append("compressed-md5"); |
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|
2035 } |
|
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|
2036 |
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|
2037 operations.append("compressed-size"); |
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|
2038 operations.append("data"); |
|
1700
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|
2039 operations.append("is-compressed"); |
|
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|
2040 |
|
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|
2041 if (info.GetUncompressedMD5() != "") |
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|
2042 { |
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|
2043 operations.append("md5"); |
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|
2044 } |
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|
2045 |
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|
2046 operations.append("size"); |
|
1700
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|
2047 operations.append("uncompress"); |
|
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|
2048 |
|
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|
2049 if (info.GetCompressedMD5() != "" && |
|
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|
2050 info.GetUncompressedMD5() != "") |
|
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|
2051 { |
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|
2052 operations.append("verify-md5"); |
|
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|
2053 } |
|
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|
2054 |
|
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|
2055 call.GetOutput().AnswerJson(operations); |
|
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|
2056 } |
|
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|
2057 } |
|
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|
2058 |
|
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|
2059 |
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|
2060 template <int uncompress> |
| 974 | 2061 static void GetAttachmentData(RestApiGetCall& call) |
|
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|
2062 { |
| 4409 | 2063 if (call.IsDocumentation()) |
| 2064 { | |
| 2065 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2066 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2067 call.GetDocumentation() | |
| 2068 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2069 .SetSummary("Get attachment" + std::string(uncompress ? "" : " (no decompression)")) | |
| 2070 .SetDescription("Get the (binary) content of one attachment associated with the given " + r + | |
| 4418 | 2071 std::string(uncompress ? "" : ". The attachment will not be decompressed if `StorageCompression` is `true`.")) |
| 4409 | 2072 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
| 4414 | 2073 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
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|
2074 .AddAnswerType(MimeType_Binary, "The attachment") |
|
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|
2075 .SetAnswerHeader("ETag", "Revision of the attachment, to be used in further `PUT` or `DELETE` operations") |
|
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|
2076 .SetHttpHeader("If-None-Match", "Optional revision of the metadata, to check if its content has changed"); |
| 4409 | 2077 return; |
| 2078 } | |
| 2079 | |
|
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|
2080 ServerContext& context = OrthancRestApi::GetContext(call); |
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|
2081 |
|
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|
2082 CheckValidResourceType(call); |
|
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2083 |
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2084 std::string publicId = call.GetUriComponent("id", ""); |
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2085 FileContentType type = StringToContentType(call.GetUriComponent("name", "")); |
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2086 |
|
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2087 FileInfo info; |
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2088 if (GetAttachmentInfo(info, call)) |
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2089 { |
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2090 // NB: "SetAttachmentETag()" is already invoked by "GetAttachmentInfo()" |
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2091 |
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2092 if (uncompress) |
|
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2093 { |
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2094 context.AnswerAttachment(call.GetOutput(), publicId, type); |
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2095 } |
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2096 else |
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2097 { |
|
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|
2098 // Return the raw data (possibly compressed), as stored on the filesystem |
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2099 std::string content; |
|
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2100 int64_t revision; |
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2101 context.ReadAttachment(content, revision, publicId, type, false); |
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2102 |
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2103 int64_t userRevision; |
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2104 std::string userMD5; |
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2105 if (GetRevisionHeader(userRevision, userMD5, call, "If-None-Match") && |
|
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2106 revision == userRevision && |
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2107 info.GetUncompressedMD5() == userMD5) |
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2108 { |
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2109 call.GetOutput().GetLowLevelOutput().SendStatus(HttpStatus_304_NotModified); |
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2110 } |
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2111 else |
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2112 { |
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2113 call.GetOutput().AnswerBuffer(content, MimeType_Binary); |
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2114 } |
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2115 } |
|
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2116 } |
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2117 } |
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2118 |
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2119 |
| 974 | 2120 static void GetAttachmentSize(RestApiGetCall& call) |
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2121 { |
| 4409 | 2122 if (call.IsDocumentation()) |
| 2123 { | |
| 2124 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2125 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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2126 AddAttachmentDocumentation(call, r); |
| 4409 | 2127 call.GetDocumentation() |
| 2128 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2129 .SetSummary("Get size of attachment") | |
| 2130 .SetDescription("Get the size of one attachment associated with the given " + r) | |
| 2131 .AddAnswerType(MimeType_PlainText, "The size of the attachment"); | |
| 2132 return; | |
| 2133 } | |
| 2134 | |
|
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2135 FileInfo info; |
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2136 if (GetAttachmentInfo(info, call)) |
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2137 { |
|
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2138 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedSize()), MimeType_PlainText); |
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2139 } |
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2140 } |
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2141 |
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2142 |
| 974 | 2143 static void GetAttachmentCompressedSize(RestApiGetCall& call) |
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2144 { |
| 4409 | 2145 if (call.IsDocumentation()) |
| 2146 { | |
| 2147 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2148 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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2149 AddAttachmentDocumentation(call, r); |
| 4409 | 2150 call.GetDocumentation() |
| 2151 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 4410 | 2152 .SetSummary("Get size of attachment on disk") |
| 4409 | 2153 .SetDescription("Get the size of one attachment associated with the given " + r + ", as stored on the disk. " |
| 4413 | 2154 "This is different from `.../size` iff `EnableStorage` is `true`.") |
| 4410 | 2155 .AddAnswerType(MimeType_PlainText, "The size of the attachment, as stored on the disk"); |
| 4409 | 2156 return; |
| 2157 } | |
| 2158 | |
|
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2159 FileInfo info; |
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|
2160 if (GetAttachmentInfo(info, call)) |
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2161 { |
|
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2162 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedSize()), MimeType_PlainText); |
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2163 } |
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2164 } |
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2165 |
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2166 |
| 974 | 2167 static void GetAttachmentMD5(RestApiGetCall& call) |
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2168 { |
| 4410 | 2169 if (call.IsDocumentation()) |
| 2170 { | |
| 2171 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2172 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
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2173 AddAttachmentDocumentation(call, r); |
| 4410 | 2174 call.GetDocumentation() |
| 2175 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2176 .SetSummary("Get MD5 of attachment") | |
| 2177 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r) | |
| 2178 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment"); | |
| 2179 return; | |
| 2180 } | |
| 2181 | |
|
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2182 FileInfo info; |
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2183 if (GetAttachmentInfo(info, call) && |
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2184 info.GetUncompressedMD5() != "") |
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2185 { |
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2186 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetUncompressedMD5()), MimeType_PlainText); |
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2187 } |
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2188 } |
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2189 |
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2190 |
| 974 | 2191 static void GetAttachmentCompressedMD5(RestApiGetCall& call) |
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2192 { |
| 4410 | 2193 if (call.IsDocumentation()) |
| 2194 { | |
| 2195 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2196 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
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2197 AddAttachmentDocumentation(call, r); |
| 4410 | 2198 call.GetDocumentation() |
| 2199 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2200 .SetSummary("Get MD5 of attachment on disk") | |
| 2201 .SetDescription("Get the MD5 hash of one attachment associated with the given " + r + ", as stored on the disk. " | |
| 4413 | 2202 "This is different from `.../md5` iff `EnableStorage` is `true`.") |
| 4410 | 2203 .AddAnswerType(MimeType_PlainText, "The MD5 of the attachment, as stored on the disk"); |
| 2204 return; | |
| 2205 } | |
| 2206 | |
|
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2207 FileInfo info; |
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2208 if (GetAttachmentInfo(info, call) && |
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2209 info.GetCompressedMD5() != "") |
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2210 { |
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2211 call.GetOutput().AnswerBuffer(boost::lexical_cast<std::string>(info.GetCompressedMD5()), MimeType_PlainText); |
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2212 } |
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2213 } |
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2214 |
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2215 |
| 974 | 2216 static void VerifyAttachment(RestApiPostCall& call) |
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2217 { |
| 4410 | 2218 if (call.IsDocumentation()) |
| 2219 { | |
| 2220 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2221 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2222 call.GetDocumentation() | |
| 2223 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2224 .SetSummary("Verify attachment") | |
| 2225 .SetDescription("Verify that the attachment is not corrupted, by validating its MD5 hash") | |
| 2226 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2227 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
| 4410 | 2228 .AddAnswerType(MimeType_Json, "On success, a valid JSON object is returned"); |
| 2229 return; | |
| 2230 } | |
| 2231 | |
|
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2232 ServerContext& context = OrthancRestApi::GetContext(call); |
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2233 CheckValidResourceType(call); |
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2234 |
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2235 std::string publicId = call.GetUriComponent("id", ""); |
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|
2236 std::string name = call.GetUriComponent("name", ""); |
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2237 FileContentType contentType = StringToContentType(name); |
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2238 |
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2239 FileInfo info; |
|
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2240 int64_t revision; // Ignored |
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2241 if (!OrthancRestApi::GetIndex(call).LookupAttachment(info, revision, publicId, contentType) || |
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|
2242 info.GetCompressedMD5() == "" || |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2243 info.GetUncompressedMD5() == "") |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2244 { |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2245 // Inexistent resource, or no MD5 available |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2246 return; |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2247 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2248 |
|
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diff
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|
2249 bool ok = false; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2250 |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
2251 // First check whether the compressed data is correctly stored in the disk |
|
5197fd35333c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
2252 std::string data; |
|
4627
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
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|
2253 context.ReadAttachment(data, revision, publicId, StringToContentType(name), false); |
|
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|
2254 |
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|
2255 std::string actualMD5; |
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|
2256 Toolbox::ComputeMD5(actualMD5, data); |
|
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|
2257 |
|
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|
2258 if (actualMD5 == info.GetCompressedMD5()) |
|
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|
2259 { |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2260 // The compressed data is OK. If a compression algorithm was |
|
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|
2261 // applied to it, now check the MD5 of the uncompressed data. |
|
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refactoring of OrthancRestApi
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parents:
diff
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|
2262 if (info.GetCompressionType() == CompressionType_None) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2263 { |
|
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|
2264 ok = true; |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2265 } |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2266 else |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2267 { |
|
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|
2268 context.ReadAttachment(data, revision, publicId, StringToContentType(name), true); |
|
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|
2269 Toolbox::ComputeMD5(actualMD5, data); |
|
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parents:
diff
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2270 ok = (actualMD5 == info.GetUncompressedMD5()); |
|
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|
2271 } |
|
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|
2272 } |
|
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|
2273 |
|
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|
2274 if (ok) |
|
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|
2275 { |
|
4294
0923247e69f6
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Alain Mazy <alain@mazy.be>
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4272
diff
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|
2276 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has the right MD5"; |
|
2908
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Sebastien Jodogne <s.jodogne@gmail.com>
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2905
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|
2277 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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|
2278 } |
|
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|
2279 else |
|
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|
2280 { |
|
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Alain Mazy <alain@mazy.be>
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4272
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|
2281 CLOG(INFO, HTTP) << "The attachment " << name << " of resource " << publicId << " has bad MD5!"; |
|
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|
2282 } |
|
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|
2283 } |
|
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|
2284 |
|
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|
2285 |
| 974 | 2286 static void UploadAttachment(RestApiPutCall& call) |
|
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|
2287 { |
| 4414 | 2288 if (call.IsDocumentation()) |
| 2289 { | |
| 2290 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2291 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2292 call.GetDocumentation() | |
| 2293 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2294 .SetSummary("Set attachment") | |
| 2295 .SetDescription("Attach a file to the given DICOM " + r + | |
| 2296 ". This call will fail if trying to modify a system attachment (i.e. whose index is < 1024).") | |
| 2297 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 2298 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") | |
| 2299 .AddRequestType(MimeType_Binary, "Binary data containing the attachment") | |
|
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4623
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|
2300 .AddAnswerType(MimeType_Json, "Empty JSON object in the case of a success") |
|
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4623
diff
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|
2301 .SetHttpHeader("If-Match", "Revision of the attachment, if this is not the first time this attachment is set."); |
| 4414 | 2302 return; |
| 2303 } | |
| 2304 | |
|
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|
2305 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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|
2306 CheckValidResourceType(call); |
|
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|
2307 |
|
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|
2308 std::string publicId = call.GetUriComponent("id", ""); |
|
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|
2309 std::string name = call.GetUriComponent("name", ""); |
|
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|
2310 |
|
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|
2311 FileContentType contentType = StringToContentType(name); |
|
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4623
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|
2312 if (IsUserContentType(contentType)) // It is forbidden to modify internal attachments |
|
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|
2313 { |
|
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4623
diff
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|
2314 int64_t oldRevision; |
|
4640
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Sebastien Jodogne <s.jodogne@gmail.com>
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4627
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|
2315 std::string oldMD5; |
|
66109d24d26e
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|
2316 bool hasOldRevision = GetRevisionHeader(oldRevision, oldMD5, call, "if-match"); |
|
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|
2317 |
|
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|
2318 if (!hasOldRevision) |
|
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|
2319 { |
|
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|
2320 OrthancConfiguration::ReaderLock lock; |
|
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|
2321 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
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|
2322 { |
|
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|
2323 // "StatelessDatabaseOperations::AddAttachment()" will ignore |
|
f7d5372b59b3
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Sebastien Jodogne <s.jodogne@gmail.com>
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4623
diff
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|
2324 // the actual value of "oldRevision" if the metadata is |
|
f7d5372b59b3
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diff
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|
2325 // inexistent as expected |
|
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4623
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|
2326 hasOldRevision = true; |
|
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4623
diff
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|
2327 oldRevision = -1; // dummy value |
|
4640
66109d24d26e
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Sebastien Jodogne <s.jodogne@gmail.com>
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4627
diff
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|
2328 oldMD5.clear(); // dummy value |
|
4627
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diff
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|
2329 } |
|
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4623
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|
2330 } |
|
f7d5372b59b3
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|
2331 |
|
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4623
diff
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|
2332 int64_t newRevision; |
|
f7d5372b59b3
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4623
diff
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|
2333 context.AddAttachment(newRevision, publicId, StringToContentType(name), call.GetBodyData(), |
|
4640
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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4627
diff
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|
2334 call.GetBodySize(), hasOldRevision, oldRevision, oldMD5); |
|
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|
2335 |
|
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4627
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|
2336 SetBufferContentETag(call.GetOutput(), newRevision, call.GetBodyData(), call.GetBodySize()); // New in Orthanc 1.9.2 |
|
2908
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Sebastien Jodogne <s.jodogne@gmail.com>
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2905
diff
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|
2337 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
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|
2338 } |
|
2128
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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|
2339 else |
|
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|
2340 { |
|
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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|
2341 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
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|
2342 } |
|
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|
2343 } |
|
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|
2344 |
|
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|
2345 |
| 974 | 2346 static void DeleteAttachment(RestApiDeleteCall& call) |
|
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|
2347 { |
| 4413 | 2348 if (call.IsDocumentation()) |
| 2349 { | |
| 2350 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2351 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2352 call.GetDocumentation() | |
| 2353 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2354 .SetSummary("Delete attachment") | |
| 4414 | 2355 .SetDescription("Delete an attachment associated with the given DICOM " + r + |
| 2356 ". This call will fail if trying to delete a system attachment (i.e. whose index is < 1024).") | |
| 4413 | 2357 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
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4623
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|
2358 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)") |
|
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4623
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|
2359 .SetHttpHeader("If-Match", "Revision of the attachment, to check if its content has not changed and can " |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2360 "be deleted. This header is mandatory if `CheckRevisions` option is `true`."); |
| 4413 | 2361 return; |
| 2362 } | |
| 2363 | |
|
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|
2364 CheckValidResourceType(call); |
|
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|
2365 |
|
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|
2366 std::string publicId = call.GetUriComponent("id", ""); |
|
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|
2367 std::string name = call.GetUriComponent("name", ""); |
|
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2368 FileContentType contentType = StringToContentType(name); |
|
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|
2369 |
|
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|
2370 bool allowed; |
|
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|
2371 if (IsUserContentType(contentType)) |
|
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|
2372 { |
|
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|
2373 allowed = true; |
|
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2127
diff
changeset
|
2374 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2375 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2376 { |
|
2940
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2377 OrthancConfiguration::ReaderLock lock; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2378 |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2379 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true) && |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2380 contentType == FileContentType_DicomAsJson) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2381 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2382 allowed = true; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2383 } |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2384 else |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2385 { |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2386 // It is forbidden to delete internal attachments, except for |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2387 // the "DICOM as JSON" summary as of Orthanc 1.2.0 (this summary |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2388 // would be automatically reconstructed on the next GET call) |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2389 allowed = false; |
|
4767d36679ed
refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2935
diff
changeset
|
2390 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2391 } |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2392 |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2393 if (allowed) |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2394 { |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2395 bool found; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2396 int64_t revision; |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2397 std::string md5; |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2398 if (GetRevisionHeader(revision, md5, call, "if-match")) |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2399 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2400 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, true, revision, md5); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2401 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2402 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2403 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2404 OrthancConfiguration::ReaderLock lock; |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2405 if (lock.GetConfiguration().GetBooleanParameter(CHECK_REVISIONS, false)) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2406 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2407 throw OrthancException(ErrorCode_Revision, |
|
4661
b1d87d41874e
typo: replaced "CheckRevision" by "CheckRevisions"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4657
diff
changeset
|
2408 "HTTP header \"If-Match\" is missing, as \"CheckRevisions\" is \"true\""); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2409 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2410 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2411 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2412 found = OrthancRestApi::GetIndex(call).DeleteAttachment(publicId, contentType, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
2413 false, -1 /* dummy value */, "" /* dummy value */); |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2414 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2415 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2416 |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2417 if (found) |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2418 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2419 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2420 } |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2421 else |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2422 { |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2423 throw OrthancException(ErrorCode_UnknownResource); |
|
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2424 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2425 } |
|
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2426 else |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2427 { |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2428 call.GetOutput().SignalError(HttpStatus_403_Forbidden); |
|
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2127
diff
changeset
|
2429 } |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2430 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2431 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2432 |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2433 template <enum CompressionType compression> |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2434 static void ChangeAttachmentCompression(RestApiPostCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2435 { |
| 4413 | 2436 if (call.IsDocumentation()) |
| 2437 { | |
| 2438 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2439 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
| 2440 call.GetDocumentation() | |
| 2441 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2442 .SetSummary(compression == CompressionType_None ? "Uncompress attachment" : "Compress attachment") | |
| 2443 .SetDescription("Change the compression scheme that is used to store an attachment.") | |
| 2444 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") | |
| 4414 | 2445 .SetUriArgument("name", "The name of the attachment, or its index (cf. `UserContentType` configuration option)"); |
| 4413 | 2446 return; |
| 2447 } | |
| 2448 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2449 CheckValidResourceType(call); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2450 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2451 std::string publicId = call.GetUriComponent("id", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2452 std::string name = call.GetUriComponent("name", ""); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2453 FileContentType contentType = StringToContentType(name); |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2454 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2455 OrthancRestApi::GetContext(call).ChangeAttachmentCompression(publicId, contentType, compression); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2456 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2457 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2458 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2459 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2460 static void IsAttachmentCompressed(RestApiGetCall& call) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2461 { |
| 4413 | 2462 if (call.IsDocumentation()) |
| 2463 { | |
| 2464 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); | |
| 2465 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); | |
|
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
2466 AddAttachmentDocumentation(call, r); |
| 4413 | 2467 call.GetDocumentation() |
| 2468 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) | |
| 2469 .SetSummary("Is attachment compressed?") | |
| 2470 .SetDescription("Test whether the attachment has been stored as a compressed file on the disk.") | |
| 2471 .AddAnswerType(MimeType_PlainText, "`0` if the attachment was stored uncompressed, `1` if it was compressed"); | |
| 2472 return; | |
| 2473 } | |
| 2474 | |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2475 FileInfo info; |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2476 if (GetAttachmentInfo(info, call)) |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2477 { |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2478 std::string answer = (info.GetCompressionType() == CompressionType_None) ? "0" : "1"; |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
2479 call.GetOutput().AnswerBuffer(answer, MimeType_PlainText); |
|
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2480 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2481 } |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2482 |
|
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1556
diff
changeset
|
2483 |
| 782 | 2484 // Raw access to the DICOM tags of an instance ------------------------------ |
| 2485 | |
| 974 | 2486 static void GetRawContent(RestApiGetCall& call) |
| 782 | 2487 { |
|
4405
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2488 if (call.IsDocumentation()) |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2489 { |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2490 call.GetDocumentation() |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2491 .SetTag("Instances") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2492 .SetSummary("Get raw tag") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2493 .SetDescription("Get the raw content of one DICOM tag in the hierarchy of DICOM dataset") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2494 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2495 .SetUriArgument("...", "Path to the DICOM tag. This is the interleaving of one DICOM tag, possibly followed " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2496 "by an index for sequences. Sequences are accessible as, for instance, `/0008-1140/1/0008-1150`") |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2497 .AddAnswerType(MimeType_Binary, "The raw value of the tag of intereset " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2498 "(binary data, whose memory layout depends on the underlying transfer syntax), " |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2499 "or JSON array containing the list of available tags if accessing a dataset"); |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2500 return; |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2501 } |
|
5466f336b09f
gathering statistics about progress of api documentation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4404
diff
changeset
|
2502 |
| 782 | 2503 std::string id = call.GetUriComponent("id", ""); |
| 2504 | |
| 2505 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); | |
| 2506 | |
| 2507 locker.GetDicom().SendPathValue(call.GetOutput(), call.GetTrailingUri()); | |
| 2508 } | |
| 2509 | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2510 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2511 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2512 static bool ExtractSharedTags(Json::Value& shared, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2513 ServerContext& context, |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2514 const std::string& publicId) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2515 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2516 // Retrieve all the instances of this patient/study/series |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2517 typedef std::list<std::string> Instances; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2518 Instances instances; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2519 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2520 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2521 // Loop over the instances |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2522 bool isFirst = true; |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2523 shared = Json::objectValue; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2524 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2525 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 2526 it != instances.end(); ++it) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2527 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2528 // Get the tags of the current instance, in the simplified format |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2529 Json::Value tags; |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2530 |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2531 try |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2532 { |
| 2124 | 2533 context.ReadDicomAsJson(tags, *it); |
|
959
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2534 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2535 catch (OrthancException&) |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2536 { |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2537 // Race condition: This instance has been removed since |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2538 // (*). Ignore this instance. |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2539 continue; |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2540 } |
|
bd5659f2a50a
fix possible race condition
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
958
diff
changeset
|
2541 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2542 if (tags.type() != Json::objectValue) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2543 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2544 return false; // Error |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2545 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2546 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2547 // Only keep the tags that are mapped to a string |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2548 Json::Value::Members members = tags.getMemberNames(); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2549 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2550 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2551 const Json::Value& tag = tags[members[i]]; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2552 if (tag.type() != Json::objectValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2553 tag["Type"].type() != Json::stringValue || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2554 tag["Type"].asString() != "String") |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2555 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2556 tags.removeMember(members[i]); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2557 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2558 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2559 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2560 if (isFirst) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2561 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2562 // This is the first instance, keep its tags as such |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2563 shared = tags; |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2564 isFirst = false; |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2565 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2566 else |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2567 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2568 // Loop over all the members of the shared tags extracted so |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2569 // far. If the value of one of these tags does not match its |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2570 // value in the current instance, remove it. |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2571 members = shared.getMemberNames(); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2572 for (size_t i = 0; i < members.size(); i++) |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2573 { |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2574 if (!tags.isMember(members[i]) || |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2575 tags[members[i]]["Value"].asString() != shared[members[i]]["Value"].asString()) |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2576 { |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2577 shared.removeMember(members[i]); |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2578 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2579 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2580 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2581 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2582 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2583 return true; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2584 } |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2585 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2586 |
| 974 | 2587 static void GetSharedTags(RestApiGetCall& call) |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
959
diff
changeset
|
2588 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2589 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2590 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2591 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2592 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2593 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2594 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2595 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2596 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2597 .SetSummary("Get shared tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2598 .SetDescription("Extract the DICOM tags whose value is constant across all the child instances of " |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2599 "the DICOM " + r + " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2600 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2601 .AddAnswerType(MimeType_Json, "JSON object containing the values of the DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2602 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/shared-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2603 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2604 } |
|
0b27841950d5
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2605 |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2606 ServerContext& context = OrthancRestApi::GetContext(call); |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2607 std::string publicId = call.GetUriComponent("id", ""); |
|
abac5c83134f
simplified and extensive shared-tags
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parents:
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diff
changeset
|
2608 |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2609 Json::Value sharedTags; |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2610 if (ExtractSharedTags(sharedTags, context, publicId)) |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2611 { |
|
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2612 // Success: Send the value of the shared tags |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2613 AnswerDicomAsJson(call, sharedTags, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
960
abac5c83134f
simplified and extensive shared-tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2614 } |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2615 } |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2616 |
|
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
2617 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2618 template <enum ResourceType resourceType, |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2619 enum DicomModule module> |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2620 static void GetModule(RestApiGetCall& call) |
|
963
81134ea872ff
retrieve values of modules
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parents:
960
diff
changeset
|
2621 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2622 if (call.IsDocumentation()) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2623 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2624 const std::string resource = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2625 std::string m; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2626 switch (module) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2627 { |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2628 case DicomModule_Patient: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2629 m = "patient"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2630 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2631 case DicomModule_Study: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2632 m = "study"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2633 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2634 case DicomModule_Series: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2635 m = "series"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2636 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2637 case DicomModule_Instance: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2638 m = "instance"; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2639 break; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2640 default: |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
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|
2641 throw OrthancException(ErrorCode_ParameterOutOfRange); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2642 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2643 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2644 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2645 |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2646 call.GetDocumentation() |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2647 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2648 .SetSummary("Get " + m + " module" + std::string(resource == m ? "" : " of " + resource)) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2649 .SetDescription("Get the " + m + " module of the DICOM " + resource + " whose Orthanc identifier is provided in the URL") |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2650 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2651 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2652 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2653 .AddAnswerType(MimeType_Json, "Information about the DICOM " + resource) |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2654 .SetHttpGetSample(GetDocumentationSampleResource(resourceType) + "/" + (*call.GetFullUri().rbegin()), true); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2655 return; |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2656 } |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2657 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2658 if (!((resourceType == ResourceType_Patient && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2659 (resourceType == ResourceType_Study && module == DicomModule_Patient) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2660 (resourceType == ResourceType_Study && module == DicomModule_Study) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2661 (resourceType == ResourceType_Series && module == DicomModule_Series) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
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|
2662 (resourceType == ResourceType_Instance && module == DicomModule_Instance) || |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2663 (resourceType == ResourceType_Instance && module == DicomModule_Image))) |
|
1054
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2664 { |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2665 throw OrthancException(ErrorCode_NotImplemented); |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2666 } |
|
1701dcb6f554
Access patient module at the study level to cope with PatientID collisions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
974
diff
changeset
|
2667 |
|
963
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diff
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|
2668 ServerContext& context = OrthancRestApi::GetContext(call); |
|
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diff
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|
2669 std::string publicId = call.GetUriComponent("id", ""); |
|
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960
diff
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|
2670 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2671 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
2672 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
2673 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2674 typedef std::set<DicomTag> ModuleTags; |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
2675 ModuleTags moduleTags; |
| 1368 | 2676 DicomTag::AddTagsForModule(moduleTags, module); |
|
963
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retrieve values of modules
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diff
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|
2677 |
|
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diff
changeset
|
2678 Json::Value tags; |
|
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diff
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|
2679 |
|
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diff
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|
2680 if (resourceType != ResourceType_Instance) |
|
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960
diff
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|
2681 { |
|
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diff
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|
2682 // Retrieve all the instances of this patient/study/series |
|
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diff
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|
2683 typedef std::list<std::string> Instances; |
|
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diff
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|
2684 Instances instances; |
|
81134ea872ff
retrieve values of modules
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parents:
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diff
changeset
|
2685 context.GetIndex().GetChildInstances(instances, publicId); |
|
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diff
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|
2686 |
|
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diff
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|
2687 if (instances.empty()) |
|
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|
2688 { |
|
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|
2689 return; // Error: No instance (should never happen) |
|
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|
2690 } |
|
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|
2691 |
|
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|
2692 // Select one child instance |
|
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|
2693 publicId = instances.front(); |
|
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|
2694 } |
|
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|
2695 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2696 context.ReadDicomAsJson(tags, publicId, ignoreTagLength); |
|
963
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|
2697 |
|
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|
2698 // Filter the tags of the instance according to the module |
|
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|
2699 Json::Value result = Json::objectValue; |
| 1303 | 2700 for (ModuleTags::const_iterator tag = moduleTags.begin(); tag != moduleTags.end(); ++tag) |
|
963
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|
2701 { |
|
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|
2702 std::string s = tag->Format(); |
|
963
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|
2703 if (tags.isMember(s)) |
|
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|
2704 { |
|
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changeset
|
2705 result[s] = tags[s]; |
|
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|
2706 } |
|
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|
2707 } |
|
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|
2708 |
|
4697
569d9ef165b1
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|
2709 AnswerDicomAsJson(call, result, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
963
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|
2710 } |
|
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|
2711 |
|
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|
2712 |
| 1722 | 2713 namespace |
| 2714 { | |
| 2715 typedef std::list< std::pair<ResourceType, std::string> > LookupResults; | |
| 2716 } | |
| 2717 | |
| 2718 | |
| 2719 static void AccumulateLookupResults(LookupResults& result, | |
|
1718
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
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diff
changeset
|
2720 ServerIndex& index, |
|
2b812969e136
getting rid of an IDatabaseWrapper::LookupIdentifier flavor
Sebastien Jodogne <s.jodogne@gmail.com>
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1703
diff
changeset
|
2721 const DicomTag& tag, |
|
1719
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2722 const std::string& value, |
|
3b1f7e706d38
fix Orthanc.test_lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1718
diff
changeset
|
2723 ResourceType level) |
|
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2724 { |
|
3034
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|
2725 std::vector<std::string> tmp; |
|
1728
4941494b5dd8
rename LookupIdentifier as LookupIdentifierExact
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|
2726 index.LookupIdentifierExact(tmp, level, tag, value); |
|
1719
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2727 |
|
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|
2728 for (size_t i = 0; i < tmp.size(); i++) |
|
1719
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2729 { |
|
3034
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|
2730 result.push_back(std::make_pair(level, tmp[i])); |
|
1719
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|
2731 } |
|
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|
2732 } |
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2733 |
|
2b812969e136
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|
2734 |
|
1139
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|
2735 static void Lookup(RestApiPostCall& call) |
|
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|
2736 { |
| 4422 | 2737 if (call.IsDocumentation()) |
| 2738 { | |
| 2739 call.GetDocumentation() | |
| 2740 .SetTag("System") | |
| 2741 .SetSummary("Look for DICOM identifiers") | |
| 2742 .SetDescription("This URI can be used to convert one DICOM identifier to a list of matching Orthanc resources") | |
| 2743 .AddRequestType(MimeType_PlainText, "The DICOM identifier of interest (i.e. the value of `PatientID`, " | |
| 2744 "`StudyInstanceUID`, `SeriesInstanceUID`, or `SOPInstanceUID`)") | |
| 2745 .AddAnswerType(MimeType_Json, "JSON array containing a list of matching Orthanc resources, each item in the " | |
| 2746 "list corresponding to a JSON object with the fields `Type`, `ID` and `Path` identifying one " | |
| 2747 "DICOM resource that is stored by Orthanc"); | |
| 2748 return; | |
| 2749 } | |
| 2750 | |
|
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|
2751 std::string tag; |
|
8dc80ba768aa
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|
2752 call.BodyToString(tag); |
|
1139
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|
2753 |
| 1722 | 2754 LookupResults resources; |
|
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|
2755 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
1719
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|
2756 AccumulateLookupResults(resources, index, DICOM_TAG_PATIENT_ID, tag, ResourceType_Patient); |
|
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|
2757 AccumulateLookupResults(resources, index, DICOM_TAG_STUDY_INSTANCE_UID, tag, ResourceType_Study); |
|
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|
2758 AccumulateLookupResults(resources, index, DICOM_TAG_SERIES_INSTANCE_UID, tag, ResourceType_Series); |
|
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|
2759 AccumulateLookupResults(resources, index, DICOM_TAG_SOP_INSTANCE_UID, tag, ResourceType_Instance); |
|
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changeset
|
2760 |
|
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|
2761 Json::Value result = Json::arrayValue; |
| 1722 | 2762 for (LookupResults::const_iterator |
|
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|
2763 it = resources.begin(); it != resources.end(); ++it) |
|
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|
2764 { |
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|
2765 ResourceType type = it->first; |
|
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|
2766 const std::string& id = it->second; |
|
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|
2767 |
|
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|
2768 Json::Value item = Json::objectValue; |
|
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|
2769 item["Type"] = EnumerationToString(type); |
|
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|
2770 item["ID"] = id; |
|
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|
2771 item["Path"] = GetBasePath(type, id); |
|
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|
2772 |
|
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|
2773 result.append(item); |
|
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|
2774 } |
|
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|
2775 |
|
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|
2776 call.GetOutput().AnswerJson(result); |
|
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|
2777 } |
|
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|
2778 |
|
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|
2779 |
|
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|
2780 namespace |
|
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|
2781 { |
|
3021
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|
2782 class FindVisitor : public ServerContext::ILookupVisitor |
|
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|
2783 { |
|
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|
2784 private: |
|
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|
2785 bool isComplete_; |
|
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|
2786 std::list<std::string> resources_; |
|
4697
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|
2787 DicomToJsonFormat format_; |
|
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|
2788 |
|
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|
2789 public: |
| 4716 | 2790 explicit FindVisitor(DicomToJsonFormat format) : |
|
4697
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|
2791 isComplete_(false), |
|
569d9ef165b1
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|
2792 format_(format) |
|
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2793 { |
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|
2794 } |
| 4205 | 2795 |
| 2796 virtual bool IsDicomAsJsonNeeded() const ORTHANC_OVERRIDE | |
|
3012
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2797 { |
|
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2798 return false; // (*) |
|
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|
2799 } |
|
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|
2800 |
| 4205 | 2801 virtual void MarkAsComplete() ORTHANC_OVERRIDE |
|
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2802 { |
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2803 isComplete_ = true; // Unused information as of Orthanc 1.5.0 |
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2804 } |
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2805 |
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changeset
|
2806 virtual void Visit(const std::string& publicId, |
|
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|
2807 const std::string& instanceId /* unused */, |
|
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|
2808 const DicomMap& mainDicomTags /* unused */, |
| 4205 | 2809 const Json::Value* dicomAsJson /* unused (*) */) ORTHANC_OVERRIDE |
|
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2810 { |
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2811 resources_.push_back(publicId); |
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2812 } |
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2813 |
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2814 void Answer(RestApiOutput& output, |
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2815 ServerIndex& index, |
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2816 ResourceType level, |
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2817 bool expand) const |
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2818 { |
|
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2819 AnswerListOfResources(output, index, resources_, level, expand, format_); |
|
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2820 } |
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2821 }; |
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2822 } |
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2823 |
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|
2824 |
| 1354 | 2825 static void Find(RestApiPostCall& call) |
| 2826 { | |
| 2998 | 2827 static const char* const KEY_CASE_SENSITIVE = "CaseSensitive"; |
| 2828 static const char* const KEY_EXPAND = "Expand"; | |
| 2829 static const char* const KEY_LEVEL = "Level"; | |
| 2830 static const char* const KEY_LIMIT = "Limit"; | |
| 2831 static const char* const KEY_QUERY = "Query"; | |
| 2832 static const char* const KEY_SINCE = "Since"; | |
| 2833 | |
| 4421 | 2834 if (call.IsDocumentation()) |
| 2835 { | |
|
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|
2836 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
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|
2837 |
| 4421 | 2838 call.GetDocumentation() |
| 2839 .SetTag("System") | |
| 2840 .SetSummary("Look for local resources") | |
| 2841 .SetDescription("This URI can be used to perform a search on the content of the local Orthanc server, " | |
| 2842 "in a way that is similar to querying remote DICOM modalities using C-FIND SCU: " | |
| 2843 "https://book.orthanc-server.com/users/rest.html#performing-finds-within-orthanc") | |
| 2844 .SetRequestField(KEY_CASE_SENSITIVE, RestApiCallDocumentation::Type_Boolean, | |
| 2845 "Enable case-sensitive search for PN value representations (defaults to configuration option `CaseSensitivePN`)", false) | |
| 2846 .SetRequestField(KEY_EXPAND, RestApiCallDocumentation::Type_Boolean, | |
| 2847 "Also retrieve the content of the matching resources, not only their Orthanc identifiers", false) | |
| 2848 .SetRequestField(KEY_LEVEL, RestApiCallDocumentation::Type_String, | |
| 2849 "Level of the query (`Patient`, `Study`, `Series` or `Instance`)", true) | |
| 2850 .SetRequestField(KEY_LIMIT, RestApiCallDocumentation::Type_Number, | |
| 2851 "Limit the number of reported resources", false) | |
| 2852 .SetRequestField(KEY_SINCE, RestApiCallDocumentation::Type_Number, | |
| 2853 "Show only the resources since the provided index (in conjunction with `Limit`)", false) | |
| 2854 .SetRequestField(KEY_QUERY, RestApiCallDocumentation::Type_JsonObject, | |
| 2855 "Associative array containing the filter on the values of the DICOM tags", true) | |
| 2856 .AddAnswerType(MimeType_Json, "JSON array containing either the Orthanc identifiers, or detailed information " | |
| 2857 "about the reported resources (if `Expand` argument is `true`)"); | |
| 2858 return; | |
| 2859 } | |
| 2860 | |
| 1358 | 2861 ServerContext& context = OrthancRestApi::GetContext(call); |
| 1354 | 2862 |
| 2863 Json::Value request; | |
|
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|
2864 if (!call.ParseJsonRequest(request) || |
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|
2865 request.type() != Json::objectValue) |
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diff
changeset
|
2866 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2867 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2868 "The body must contain a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2869 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2870 else if (!request.isMember(KEY_LEVEL) || |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2871 request[KEY_LEVEL].type() != Json::stringValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2872 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2873 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2874 "Field \"" + std::string(KEY_LEVEL) + "\" is missing, or should be a string"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2875 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2876 else if (!request.isMember(KEY_QUERY) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2877 request[KEY_QUERY].type() != Json::objectValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2878 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2879 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2880 "Field \"" + std::string(KEY_QUERY) + "\" is missing, or should be a JSON object"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2881 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2882 else if (request.isMember(KEY_CASE_SENSITIVE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2883 request[KEY_CASE_SENSITIVE].type() != Json::booleanValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2884 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2885 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2886 "Field \"" + std::string(KEY_CASE_SENSITIVE) + "\" should be a Boolean"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2887 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2888 else if (request.isMember(KEY_LIMIT) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2889 request[KEY_LIMIT].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2890 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2891 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2892 "Field \"" + std::string(KEY_LIMIT) + "\" should be an integer"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2893 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2894 else if (request.isMember(KEY_SINCE) && |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2895 request[KEY_SINCE].type() != Json::intValue) |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2896 { |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2897 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2898 "Field \"" + std::string(KEY_SINCE) + "\" should be an integer"); |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2899 } |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2900 else |
| 1354 | 2901 { |
| 2902 bool expand = false; | |
| 2998 | 2903 if (request.isMember(KEY_EXPAND)) |
| 1354 | 2904 { |
| 2998 | 2905 expand = request[KEY_EXPAND].asBool(); |
| 1354 | 2906 } |
| 2907 | |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2908 bool caseSensitive = false; |
| 2998 | 2909 if (request.isMember(KEY_CASE_SENSITIVE)) |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2910 { |
| 2998 | 2911 caseSensitive = request[KEY_CASE_SENSITIVE].asBool(); |
|
1374
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2912 } |
|
a1745d9be6e9
CaseSensitivePN configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1361
diff
changeset
|
2913 |
| 1758 | 2914 size_t limit = 0; |
| 2998 | 2915 if (request.isMember(KEY_LIMIT)) |
| 1758 | 2916 { |
| 2998 | 2917 int tmp = request[KEY_LIMIT].asInt(); |
| 1847 | 2918 if (tmp < 0) |
| 1758 | 2919 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2920 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2921 "Field \"" + std::string(KEY_LIMIT) + "\" should be a positive integer"); |
| 1758 | 2922 } |
| 1847 | 2923 |
| 2924 limit = static_cast<size_t>(tmp); | |
| 1758 | 2925 } |
| 2926 | |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2927 size_t since = 0; |
| 2998 | 2928 if (request.isMember(KEY_SINCE)) |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2929 { |
| 2998 | 2930 int tmp = request[KEY_SINCE].asInt(); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2931 if (tmp < 0) |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2932 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2933 throw OrthancException(ErrorCode_ParameterOutOfRange, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2934 "Field \"" + std::string(KEY_SINCE) + "\" should be a positive integer"); |
|
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2935 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2936 |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2937 since = static_cast<size_t>(tmp); |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2938 } |
|
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2281
diff
changeset
|
2939 |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2940 ResourceType level = StringToResourceType(request[KEY_LEVEL].asCString()); |
| 1360 | 2941 |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2942 DatabaseLookup query; |
| 1358 | 2943 |
| 2998 | 2944 Json::Value::Members members = request[KEY_QUERY].getMemberNames(); |
| 1354 | 2945 for (size_t i = 0; i < members.size(); i++) |
| 2946 { | |
| 2998 | 2947 if (request[KEY_QUERY][members[i]].type() != Json::stringValue) |
| 1354 | 2948 { |
|
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2949 throw OrthancException(ErrorCode_BadRequest, |
|
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2998
diff
changeset
|
2950 "Tag \"" + members[i] + "\" should be associated with a string"); |
| 1354 | 2951 } |
| 2952 | |
|
3163
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2953 const std::string value = request[KEY_QUERY][members[i]].asString(); |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2954 |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2955 if (!value.empty()) |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2956 { |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2957 // An empty string corresponds to an universal constraint, |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2958 // so we ignore it. This mimics the behavior of class |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2959 // "OrthancFindRequestHandler" |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2960 query.AddRestConstraint(FromDcmtkBridge::ParseTag(members[i]), |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2961 value, caseSensitive, true); |
|
cf91b6f22278
Fix issue #90 (C-Find shall match missing tags to null/empty string)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3094
diff
changeset
|
2962 } |
|
1361
94ffb597d297
refactoring of C-Find SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1360
diff
changeset
|
2963 } |
| 2876 | 2964 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2965 FindVisitor visitor(OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human)); |
|
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2966 context.Apply(visitor, query, level, since, limit); |
|
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3027
diff
changeset
|
2967 visitor.Answer(call.GetOutput(), context.GetIndex(), level, expand); |
| 1354 | 2968 } |
| 2969 } | |
| 2970 | |
| 2971 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2972 template <enum ResourceType start, |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2973 enum ResourceType end> |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2974 static void GetChildResources(RestApiGetCall& call) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2975 { |
| 4415 | 2976 if (call.IsDocumentation()) |
| 2977 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2978 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
2979 |
| 4415 | 2980 const std::string children = GetResourceTypeText(end, true /* plural */, false /* lower case */); |
| 2981 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 2982 call.GetDocumentation() | |
| 2983 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 2984 .SetSummary("Get child " + children) | |
| 2985 .SetDescription("Get detailed information about the child " + children + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
2986 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 2987 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 2988 .AddAnswerType(MimeType_Json, "JSON array containing information about the child DICOM " + children) | |
| 2989 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + children, 5); | |
| 2990 return; | |
| 2991 } | |
| 2992 | |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2993 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2994 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2995 std::list<std::string> a, b, c; |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2996 a.push_back(call.GetUriComponent("id", "")); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2997 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2998 ResourceType type = start; |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
2999 while (type != end) |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3000 { |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3001 b.clear(); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3002 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3003 for (std::list<std::string>::const_iterator |
| 1303 | 3004 it = a.begin(); it != a.end(); ++it) |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3005 { |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3006 index.GetChildren(c, *it); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3007 b.splice(b.begin(), c); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3008 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3009 |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3010 type = GetChildResourceType(type); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3011 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3012 a.clear(); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3013 a.splice(a.begin(), b); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3014 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3015 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3016 Json::Value result = Json::arrayValue; |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3017 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3018 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3019 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3020 for (std::list<std::string>::const_iterator |
| 1303 | 3021 it = a.begin(); it != a.end(); ++it) |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3022 { |
| 4554 | 3023 Json::Value resource; |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3024 if (OrthancRestApi::GetIndex(call).ExpandResource(resource, *it, end, format)) |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3025 { |
| 4554 | 3026 result.append(resource); |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3027 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3028 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3029 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3030 call.GetOutput().AnswerJson(result); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3031 } |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3032 |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3033 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3034 static void GetChildInstancesTags(RestApiGetCall& call) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3035 { |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3036 if (call.IsDocumentation()) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3037 { |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3038 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3039 |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3040 ResourceType t = StringToResourceType(call.GetFullUri()[0].c_str()); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3041 std::string r = GetResourceTypeText(t, false /* plural */, false /* upper case */); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3042 call.GetDocumentation() |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3043 .SetTag(GetResourceTypeText(t, true /* plural */, true /* upper case */)) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3044 .SetSummary("Get tags of instances") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3045 .SetDescription("Get the tags of all the child instances of the DICOM " + r + |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3046 " whose Orthanc identifier is provided in the URL") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3047 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest") |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3048 .SetHttpGetArgument(IGNORE_LENGTH, RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4416
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3049 "Also include the DICOM tags that are provided in this list, even if their associated value is long", false) |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3050 .AddAnswerType(MimeType_Json, "JSON object associating the Orthanc identifiers of the instances, with the values of their DICOM tags") |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3051 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(t) + "/instances-tags", 5); |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3052 return; |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3053 } |
|
0b27841950d5
openapi about creation of zip/media archives
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4415
diff
changeset
|
3054 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3055 ServerContext& context = OrthancRestApi::GetContext(call); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3056 std::string publicId = call.GetUriComponent("id", ""); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3057 DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3058 |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3059 std::set<DicomTag> ignoreTagLength; |
|
4722
2b4da0ee6b73
added missing documentation of "ignore-length" in "/instances/{id}/tags"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4716
diff
changeset
|
3060 ParseSetOfTags(ignoreTagLength, call, IGNORE_LENGTH); |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3061 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3062 // Retrieve all the instances of this patient/study/series |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3063 typedef std::list<std::string> Instances; |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3064 Instances instances; |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3065 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3066 context.GetIndex().GetChildInstances(instances, publicId); // (*) |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3067 |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3068 Json::Value result = Json::objectValue; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3069 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3070 for (Instances::const_iterator it = instances.begin(); |
| 1303 | 3071 it != instances.end(); ++it) |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3072 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3073 Json::Value full; |
|
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2408
diff
changeset
|
3074 context.ReadDicomAsJson(full, *it, ignoreTagLength); |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3075 |
|
2622
3603a2e14592
New option "?short" to list DICOM tags using their hexadecimal ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2447
diff
changeset
|
3076 if (format != DicomToJsonFormat_Full) |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3077 { |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3078 Json::Value simplified; |
|
4055
9214e3a7b0a2
moving FromDcmtkTests.cpp from OrthancServer to OrthancFramework
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4045
diff
changeset
|
3079 Toolbox::SimplifyDicomAsJson(simplified, full, format); |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3080 result[*it] = simplified; |
|
1166
a921e3b5e763
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3081 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3082 else |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3083 { |
|
1201
09aa7c126be9
URIs 'instance-tags' now indexed by the instance IDs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1172
diff
changeset
|
3084 result[*it] = full; |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3085 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3086 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3087 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3088 call.GetOutput().AnswerJson(result); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3089 } |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3090 |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3091 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3092 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3093 template <enum ResourceType start, |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3094 enum ResourceType end> |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3095 static void GetParentResource(RestApiGetCall& call) |
|
8dac11c78d71
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3096 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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1276
diff
changeset
|
3097 assert(start > end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3098 |
| 4415 | 3099 if (call.IsDocumentation()) |
| 3100 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3101 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3102 |
| 4415 | 3103 const std::string parent = GetResourceTypeText(end, false /* plural */, false /* lower case */); |
| 3104 const std::string resource = GetResourceTypeText(start, false /* plural */, false /* lower case */); | |
| 3105 call.GetDocumentation() | |
| 3106 .SetTag(GetResourceTypeText(start, true /* plural */, true /* upper case */)) | |
| 3107 .SetSummary("Get parent " + parent) | |
| 3108 .SetDescription("Get detailed information about the parent " + parent + " of the DICOM " + | |
|
4416
0b27841950d5
openapi about creation of zip/media archives
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diff
changeset
|
3109 resource + " whose Orthanc identifier is provided in the URL") |
| 4415 | 3110 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest") |
| 3111 .AddAnswerType(MimeType_Json, "Information about the parent DICOM " + parent) | |
| 3112 .SetTruncatedJsonHttpGetSample(GetDocumentationSampleResource(start) + "/" + parent, 10); | |
| 3113 return; | |
| 3114 } | |
| 3115 | |
|
1281
8dac11c78d71
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3116 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3117 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3118 std::string current = call.GetUriComponent("id", ""); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3119 ResourceType currentType = start; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3120 while (currentType > end) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3121 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3122 std::string parent; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3123 if (!index.LookupParent(parent, current)) |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3124 { |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3125 // Error that could happen if the resource gets deleted by |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3126 // another concurrent call |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3127 return; |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3128 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3129 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3130 current = parent; |
|
1555
d6a93e12b1c1
Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1509
diff
changeset
|
3131 currentType = GetParentResourceType(currentType); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3132 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3133 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3134 assert(currentType == end); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3135 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3136 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Human); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3137 |
| 4554 | 3138 Json::Value resource; |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3139 if (OrthancRestApi::GetIndex(call).ExpandResource(resource, current, end, format)) |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3140 { |
| 4554 | 3141 call.GetOutput().AnswerJson(resource); |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3142 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3143 } |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3144 |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3145 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3146 static void ExtractPdf(RestApiGetCall& call) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3147 { |
| 4407 | 3148 if (call.IsDocumentation()) |
| 3149 { | |
| 3150 call.GetDocumentation() | |
| 3151 .SetTag("Instances") | |
| 3152 .SetSummary("Get embedded PDF") | |
| 3153 .SetDescription("Get the PDF file that is embedded in one DICOM instance. " | |
| 3154 "If the DICOM instance doesn't contain the `EncapsulatedDocument` tag or if the " | |
| 3155 "`MIMETypeOfEncapsulatedDocument` tag doesn't correspond to the PDF type, a `404` HTTP error is raised.") | |
| 3156 .SetUriArgument("id", "Orthanc identifier of the instance interest") | |
| 3157 .AddAnswerType(MimeType_Pdf, "PDF file"); | |
| 3158 return; | |
| 3159 } | |
| 3160 | |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3161 const std::string id = call.GetUriComponent("id", ""); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3162 std::string pdf; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3163 ServerContext::DicomCacheLocker locker(OrthancRestApi::GetContext(call), id); |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3164 |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3165 if (locker.GetDicom().ExtractPdf(pdf)) |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3166 { |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3167 call.GetOutput().AnswerBuffer(pdf, MimeType_Pdf); |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3168 return; |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3169 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3170 } |
|
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3171 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3172 |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3173 static void OrderSlices(RestApiGetCall& call) |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3174 { |
| 4421 | 3175 if (call.IsDocumentation()) |
| 3176 { | |
| 3177 call.GetDocumentation() | |
| 3178 .SetDeprecated() | |
| 3179 .SetTag("Series") | |
| 3180 .SetSummary("Order the slices") | |
| 3181 .SetDescription("Sort the instances and frames (slices) of the DICOM series whose Orthanc identifier is provided in the URL. " | |
| 3182 "This URI is essentially used by the Orthanc Web viewer and by the Osimis Web viewer.") | |
| 3183 .SetUriArgument("id", "Orthanc identifier of the series of interest") | |
| 3184 .SetAnswerField("Dicom", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3185 "Ordered list of paths to DICOM instances") | |
| 3186 .SetAnswerField("Slices", RestApiCallDocumentation::Type_JsonListOfStrings, | |
| 3187 "Ordered list of paths to frames. It is recommended to use this field, as it is also valid " | |
| 3188 "in the case of multiframe images.") | |
| 3189 .SetAnswerField("SlicesShort", RestApiCallDocumentation::Type_JsonListOfObjects, | |
| 3190 "Same information as the `Slices` field, but in a compact form") | |
| 3191 .SetAnswerField("Type", RestApiCallDocumentation::Type_String, | |
| 3192 "Can be `Volume` (for 3D volumes) or `Sequence` (notably for cine images)") | |
| 3193 .SetTruncatedJsonHttpGetSample("https://demo.orthanc-server.com/series/1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0/ordered-slices", 10); | |
| 3194 return; | |
| 3195 } | |
| 3196 | |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3197 const std::string id = call.GetUriComponent("id", ""); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3198 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3199 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3200 SliceOrdering ordering(index, id); |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3201 |
|
1703
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3202 Json::Value result; |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3203 ordering.Format(result); |
|
b80e76dd1d56
ordered-slices continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1702
diff
changeset
|
3204 call.GetOutput().AnswerJson(result); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3205 } |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3206 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3207 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3208 static void GetInstanceHeader(RestApiGetCall& call) |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3209 { |
| 4404 | 3210 if (call.IsDocumentation()) |
| 3211 { | |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3212 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Full); |
| 4404 | 3213 call.GetDocumentation() |
| 3214 .SetTag("Instances") | |
| 3215 .SetSummary("Get DICOM meta-header") | |
| 3216 .SetDescription("Get the DICOM tags in the meta-header of the DICOM instance. By default, the `full` format is used, which " | |
| 3217 "combines hexadecimal tags with human-readable description.") | |
| 3218 .SetUriArgument("id", "Orthanc identifier of the DICOM instance of interest") | |
| 3219 .AddAnswerType(MimeType_Json, "JSON object containing the DICOM tags and their associated value") | |
| 3220 .SetHttpGetSample("https://demo.orthanc-server.com/instances/7c92ce8e-bbf67ed2-ffa3b8c1-a3b35d94-7ff3ae26/header", true); | |
| 3221 return; | |
| 3222 } | |
| 3223 | |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3224 ServerContext& context = OrthancRestApi::GetContext(call); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3225 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3226 std::string publicId = call.GetUriComponent("id", ""); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3227 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3228 std::string dicomContent; |
|
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4777
diff
changeset
|
3229 context.ReadDicomForHeader(dicomContent, publicId); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3230 |
|
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3231 // TODO Consider using "DicomMap::ParseDicomMetaInformation()" to |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3232 // speed up things here |
|
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2003
diff
changeset
|
3233 |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3234 ParsedDicomFile dicom(dicomContent); |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3235 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3236 Json::Value header; |
|
4140
0ddc5297a8ab
centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4139
diff
changeset
|
3237 OrthancConfiguration::DefaultDicomHeaderToJson(header, dicom); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3238 |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3239 AnswerDicomAsJson(call, header, OrthancRestApi::GetDicomFormat(call, DicomToJsonFormat_Full)); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3240 } |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3241 |
|
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3242 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3243 static void InvalidateTags(RestApiPostCall& call) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3244 { |
| 4420 | 3245 if (call.IsDocumentation()) |
| 3246 { | |
| 3247 call.GetDocumentation() | |
| 3248 .SetTag("System") | |
| 3249 .SetSummary("Invalidate DICOM-as-JSON summaries") | |
| 3250 .SetDescription("Remove all the attachments of the type \"DICOM-as-JSON\" that are associated will all the " | |
| 3251 "DICOM instances stored in Orthanc. These summaries will be automatically re-created on the next access. " | |
| 3252 "This is notably useful after changes to the `Dictionary` configuration option. " | |
| 3253 "https://book.orthanc-server.com/faq/orthanc-storage.html#storage-area"); | |
| 3254 return; | |
| 3255 } | |
| 3256 | |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3257 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3258 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3259 // Loop over the instances, grouping them by parent studies so as |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3260 // to avoid large memory consumption |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3261 std::list<std::string> studies; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3262 index.GetAllUuids(studies, ResourceType_Study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3263 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3264 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3265 study = studies.begin(); study != studies.end(); ++study) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3266 { |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3267 std::list<std::string> instances; |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3268 index.GetChildInstances(instances, *study); |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3269 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3270 for (std::list<std::string>::const_iterator |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3271 instance = instances.begin(); instance != instances.end(); ++instance) |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3272 { |
|
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3273 index.DeleteAttachment(*instance, FileContentType_DicomAsJson, |
|
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
3274 false /* no revision checks */, -1 /* dummy */, "" /* dummy */); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3275 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3276 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3277 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3278 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3279 } |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3280 |
|
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3281 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3282 template <enum ResourceType type> |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3283 static void ReconstructResource(RestApiPostCall& call) |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3284 { |
| 4420 | 3285 if (call.IsDocumentation()) |
| 3286 { | |
| 3287 const std::string resource = GetResourceTypeText(type, false /* plural */, false /* lower case */); | |
| 3288 call.GetDocumentation() | |
| 3289 .SetTag(GetResourceTypeText(type, true /* plural */, true /* upper case */)) | |
| 3290 .SetSummary("Reconstruct tags of " + resource) | |
| 3291 .SetDescription("Reconstruct the main DICOM tags of the " + resource + " whose Orthanc identifier is provided " | |
| 3292 "in the URL. This is useful if child studies/series/instances have inconsistent values for " | |
| 3293 "higher-level tags, in order to force Orthanc to use the value from the resource of interest. " | |
| 3294 "Beware that this is a time-consuming operation, as all the children DICOM instances will be " | |
| 3295 "parsed again, and the Orthanc index will be updated accordingly.") | |
| 3296 .SetUriArgument("id", "Orthanc identifier of the " + resource + " of interest"); | |
| 3297 return; | |
| 3298 } | |
| 3299 | |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3300 ServerContext& context = OrthancRestApi::GetContext(call); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3301 ServerToolbox::ReconstructResource(context, call.GetUriComponent("id", "")); |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3302 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3303 } |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3304 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3305 |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3306 static void ReconstructAllResources(RestApiPostCall& call) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3307 { |
| 4420 | 3308 if (call.IsDocumentation()) |
| 3309 { | |
| 3310 call.GetDocumentation() | |
| 3311 .SetTag("System") | |
| 3312 .SetSummary("Reconstruct all the index") | |
| 3313 .SetDescription("Reconstruct the index of all the tags of all the DICOM instances that are stored in Orthanc. " | |
| 3314 "This is notably useful after the deletion of resources whose children resources have inconsistent " | |
| 3315 "values with their sibling resources. Beware that this is a highly time-consuming operation, " | |
| 3316 "as all the DICOM instances will be parsed again, and as all the Orthanc index will be regenerated."); | |
| 3317 return; | |
| 3318 } | |
| 3319 | |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3320 ServerContext& context = OrthancRestApi::GetContext(call); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3321 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3322 std::list<std::string> studies; |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3323 context.GetIndex().GetAllUuids(studies, ResourceType_Study); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3324 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3325 for (std::list<std::string>::const_iterator |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3326 study = studies.begin(); study != studies.end(); ++study) |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3327 { |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3328 ServerToolbox::ReconstructResource(context, *study); |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3329 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3330 |
|
2908
9d277f8ad698
new enumeration: MimeType
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2905
diff
changeset
|
3331 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3332 } |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3333 |
|
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3334 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3335 static void GetBulkChildren(std::set<std::string>& target, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3336 ServerIndex& index, |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3337 const std::set<std::string>& source) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3338 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3339 target.clear(); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3340 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3341 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3342 it = source.begin(); it != source.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3343 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3344 std::list<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3345 index.GetChildren(children, *it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3346 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3347 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3348 child = children.begin(); child != children.end(); ++child) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3349 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3350 target.insert(*child); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3351 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3352 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3353 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3354 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3355 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3356 static void AddMetadata(Json::Value& target, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3357 ServerIndex& index, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3358 const std::string& resource, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3359 ResourceType level) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3360 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3361 target = Json::objectValue; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3362 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3363 std::map<MetadataType, std::string> content; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3364 index.GetAllMetadata(content, resource, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3365 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3366 for (std::map<MetadataType, std::string>::const_iterator |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3367 it = content.begin(); it != content.end(); ++it) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3368 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3369 target[EnumerationToString(it->first)] = it->second; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3370 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3371 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3372 |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3373 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3374 static void BulkContent(RestApiPostCall& call) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3375 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3376 static const char* const LEVEL = "Level"; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3377 static const char* const METADATA = "Metadata"; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3378 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3379 if (call.IsDocumentation()) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3380 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3381 OrthancRestApi::DocumentDicomFormat(call, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3382 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3383 call.GetDocumentation() |
|
d16c3c7f11ef
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3384 .SetTag("System") |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3385 .SetSummary("Describe a set of instances") |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3386 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3387 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3388 .SetRequestField(LEVEL, RestApiCallDocumentation::Type_String, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3389 "This optional argument specifies the level of interest (can be `Patient`, `Study`, `Series` or " |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3390 "`Instance`). Orthanc will loop over the items inside `Resources`, and explorer upward or " |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3391 "downward in the DICOM hierarchy in order to find the level of interest.", false) |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3392 .SetRequestField(METADATA, RestApiCallDocumentation::Type_Boolean, |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3393 "If set to `true` (default value), the metadata associated with the resources will also be retrieved.", false) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3394 .SetDescription("Get the content all the DICOM patients, studies, series or instances " |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3395 "whose identifiers are provided in the `Resources` field, in one single call."); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3396 return; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3397 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3398 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3399 Json::Value request; |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3400 if (!call.ParseJsonRequest(request) || |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3401 request.type() != Json::objectValue) |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3402 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3403 throw OrthancException(ErrorCode_BadRequest, |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3404 "The body must contain a JSON object"); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3405 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3406 else |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3407 { |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3408 const DicomToJsonFormat format = OrthancRestApi::GetDicomFormat(request, DicomToJsonFormat_Human); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3409 |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3410 bool metadata = true; |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3411 if (request.isMember(METADATA)) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3412 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3413 metadata = SerializationToolbox::ReadBoolean(request, METADATA); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3414 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3415 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3416 ServerIndex& index = OrthancRestApi::GetIndex(call); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3417 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3418 Json::Value answer = Json::arrayValue; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3419 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3420 if (request.isMember(LEVEL)) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3421 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3422 // Complex case: Need to explore the DICOM hierarchy |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3423 ResourceType level = StringToResourceType(SerializationToolbox::ReadString(request, LEVEL).c_str()); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3424 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3425 std::set<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3426 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3427 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3428 std::set<std::string> interest; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3429 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3430 assert(ResourceType_Patient < ResourceType_Study && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3431 ResourceType_Study < ResourceType_Series && |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3432 ResourceType_Series < ResourceType_Instance); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3433 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3434 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3435 it = resources.begin(); it != resources.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3436 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3437 ResourceType type; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3438 if (index.LookupResourceType(type, *it)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3439 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3440 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3441 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3442 // This resource is already from the level of interest |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3443 interest.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3444 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3445 else if (type < level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3446 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3447 // Need to explore children |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3448 std::set<std::string> current; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3449 current.insert(*it); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3450 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3451 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3452 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3453 std::set<std::string> children; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3454 GetBulkChildren(children, index, current); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3455 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3456 type = GetChildResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3457 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3458 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3459 for (std::set<std::string>::const_iterator |
| 4716 | 3460 it2 = children.begin(); it2 != children.end(); ++it2) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3461 { |
| 4716 | 3462 interest.insert(*it2); |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3463 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3464 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3465 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3466 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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4698
diff
changeset
|
3467 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3468 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3469 current.swap(children); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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parents:
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diff
changeset
|
3470 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3471 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3472 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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parents:
4698
diff
changeset
|
3473 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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parents:
4698
diff
changeset
|
3474 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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parents:
4698
diff
changeset
|
3475 // Need to explore parents |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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4698
diff
changeset
|
3476 std::string current = *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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4698
diff
changeset
|
3477 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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4698
diff
changeset
|
3478 for (;;) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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parents:
4698
diff
changeset
|
3479 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
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parents:
4698
diff
changeset
|
3480 std::string parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3481 if (index.LookupParent(parent, current)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3482 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3483 type = GetParentResourceType(type); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3484 if (type == level) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3485 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3486 interest.insert(parent); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3487 break; // done |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3488 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3489 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3490 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3491 current = parent; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3492 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3493 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3494 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3495 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3496 break; // The resource has been deleted during the exploration |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3497 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3498 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3499 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3500 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3501 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3502 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3503 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3504 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3505 } |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3506 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3507 for (std::set<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3508 it = interest.begin(); it != interest.end(); ++it) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3509 { |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3510 Json::Value item; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3511 if (index.ExpandResource(item, *it, level, format)) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3512 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3513 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3514 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3515 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3516 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3517 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3518 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3519 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3520 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3521 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3522 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3523 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3524 // Simple case: We return the queried resources as such |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3525 std::list<std::string> resources; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3526 SerializationToolbox::ReadListOfStrings(resources, request, "Resources"); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3527 |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3528 for (std::list<std::string>::const_iterator |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3529 it = resources.begin(); it != resources.end(); ++it) |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3530 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3531 ResourceType level; |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3532 Json::Value item; |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3533 if (index.LookupResourceType(level, *it) && |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3534 index.ExpandResource(item, *it, level, format)) |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3535 { |
|
4714
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3536 if (metadata) |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3537 { |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3538 AddMetadata(item[METADATA], index, *it, level); |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3539 } |
|
8ffe2fdb541f
added argument "Metadata" to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4699
diff
changeset
|
3540 |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3541 answer.append(item); |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3542 } |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3543 else |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3544 { |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3545 CLOG(INFO, HTTP) << "Unknown resource during a bulk content retrieval: " << *it; |
|
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3546 } |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3547 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3548 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3549 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3550 call.GetOutput().AnswerJson(answer); |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3551 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3552 } |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3553 |
|
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3554 |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3555 static void BulkDelete(RestApiPostCall& call) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3556 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3557 if (call.IsDocumentation()) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3558 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3559 call.GetDocumentation() |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3560 .SetTag("System") |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3561 .SetSummary("Delete a set of instances") |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3562 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings, |
|
4699
facea16b055b
added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4698
diff
changeset
|
3563 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true) |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3564 .SetDescription("Delete all the DICOM patients, studies, series or instances " |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3565 "whose identifiers are provided in the `Resources` field."); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3566 return; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3567 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3568 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3569 ServerContext& context = OrthancRestApi::GetContext(call); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3570 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3571 Json::Value request; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3572 if (!call.ParseJsonRequest(request) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3573 request.type() != Json::objectValue) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3574 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3575 throw OrthancException(ErrorCode_BadRequest, |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3576 "The body must contain a JSON object"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3577 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3578 else |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3579 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3580 std::set<std::string> resources; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3581 SerializationToolbox::ReadSetOfStrings(resources, request, "Resources"); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3582 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3583 for (std::set<std::string>::const_iterator |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3584 it = resources.begin(); it != resources.end(); ++it) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3585 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3586 ResourceType type; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3587 Json::Value remainingAncestor; // Unused |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3588 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3589 if (!context.GetIndex().LookupResourceType(type, *it) || |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3590 !context.DeleteResource(remainingAncestor, *it, type)) |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3591 { |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3592 CLOG(INFO, HTTP) << "Unknown resource during a bulk deletion: " << *it; |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3593 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3594 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3595 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3596 call.GetOutput().AnswerBuffer("", MimeType_PlainText); |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3597 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3598 } |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3599 |
|
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3600 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3601 void OrthancRestApi::RegisterResources() |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3602 { |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3603 Register("/instances", ListResources<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3604 Register("/patients", ListResources<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3605 Register("/series", ListResources<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3606 Register("/studies", ListResources<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3607 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3608 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3609 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3610 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3611 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3612 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3613 Register("/series/{id}", GetSingleResource<ResourceType_Series>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3614 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3615 Register("/studies/{id}", GetSingleResource<ResourceType_Study>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3616 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3617 Register("/instances/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3618 Register("/patients/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3619 Register("/studies/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3620 Register("/series/{id}/statistics", GetResourceStatistics); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3621 |
|
964
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3622 Register("/patients/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3623 Register("/series/{id}/shared-tags", GetSharedTags); |
|
cc7a4ae474c1
simplify has a GET argument
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
963
diff
changeset
|
3624 Register("/studies/{id}/shared-tags", GetSharedTags); |
|
958
1fbe89dc18b5
extraction of the shared tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
874
diff
changeset
|
3625 |
|
1276
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3626 Register("/instances/{id}/module", GetModule<ResourceType_Instance, DicomModule_Instance>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3627 Register("/patients/{id}/module", GetModule<ResourceType_Patient, DicomModule_Patient>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3628 Register("/series/{id}/module", GetModule<ResourceType_Series, DicomModule_Series>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3629 Register("/studies/{id}/module", GetModule<ResourceType_Study, DicomModule_Study>); |
|
6164f7200c43
refactoring modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1201
diff
changeset
|
3630 Register("/studies/{id}/module-patient", GetModule<ResourceType_Study, DicomModule_Patient>); |
|
963
81134ea872ff
retrieve values of modules
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
960
diff
changeset
|
3631 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3632 Register("/instances/{id}/file", GetInstanceFile); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3633 Register("/instances/{id}/export", ExportInstanceFile); |
|
4697
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3634 Register("/instances/{id}/tags", GetInstanceTags); |
|
569d9ef165b1
Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
3635 Register("/instances/{id}/simplified-tags", GetInstanceSimplifiedTags); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3636 Register("/instances/{id}/frames", ListFrames); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3637 |
|
4424
83371ccdfe80
openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4422
diff
changeset
|
3638 Register("/instances/{id}/frames/{frame}", RestApi::AutoListChildren); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3639 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3640 Register("/instances/{id}/frames/{frame}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3641 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3642 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3643 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3644 Register("/instances/{id}/frames/{frame}/matlab", GetMatlabImage); |
|
2408
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3645 Register("/instances/{id}/frames/{frame}/raw", GetRawFrame<false>); |
|
26a0cc24d48d
New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2382
diff
changeset
|
3646 Register("/instances/{id}/frames/{frame}/raw.gz", GetRawFrame<true>); |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
3647 Register("/instances/{id}/frames/{frame}/numpy", GetNumpyFrame); // New in Orthanc 1.9.8 |
|
1556
b8dc2f855a83
Preview of PDF files encapsulated in DICOM from Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1555
diff
changeset
|
3648 Register("/instances/{id}/pdf", ExtractPdf); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3649 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>); |
|
3683
12253ddefe5a
skeleton for new route: /instances/{id}/rendered
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
3650 Register("/instances/{id}/rendered", GetRenderedFrame); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3651 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3652 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3653 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>); |
|
874
87791ebc1f50
download matlab images
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
831
diff
changeset
|
3654 Register("/instances/{id}/matlab", GetMatlabImage); |
|
1831
3ae2ff249675
"/instances/.../header" to get the meta information (header) of the DICOM instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1826
diff
changeset
|
3655 Register("/instances/{id}/header", GetInstanceHeader); |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
3656 Register("/instances/{id}/numpy", GetNumpyInstance); // New in Orthanc 1.9.8 |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3657 |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3658 Register("/patients/{id}/protected", IsProtectedPatient); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3659 Register("/patients/{id}/protected", SetPatientProtection); |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3660 |
| 4409 | 3661 std::vector<std::string> resourceTypes; |
| 3662 resourceTypes.push_back("patients"); | |
| 3663 resourceTypes.push_back("studies"); | |
| 3664 resourceTypes.push_back("series"); | |
| 3665 resourceTypes.push_back("instances"); | |
| 3666 | |
| 3667 for (size_t i = 0; i < resourceTypes.size(); i++) | |
| 3668 { | |
| 3669 Register("/" + resourceTypes[i] + "/{id}/metadata", ListMetadata); | |
| 3670 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", DeleteMetadata); | |
| 3671 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", GetMetadata); | |
| 3672 Register("/" + resourceTypes[i] + "/{id}/metadata/{name}", SetMetadata); | |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3673 |
| 4409 | 3674 Register("/" + resourceTypes[i] + "/{id}/attachments", ListAttachments); |
| 3675 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", DeleteAttachment); | |
| 3676 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", GetAttachmentOperations); | |
| 3677 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}", UploadAttachment); | |
| 3678 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compress", ChangeAttachmentCompression<CompressionType_ZlibWithSize>); | |
| 3679 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-data", GetAttachmentData<0>); | |
| 3680 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-md5", GetAttachmentCompressedMD5); | |
| 3681 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/compressed-size", GetAttachmentCompressedSize); | |
| 3682 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/data", GetAttachmentData<1>); | |
| 3683 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/is-compressed", IsAttachmentCompressed); | |
| 3684 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/md5", GetAttachmentMD5); | |
| 3685 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/size", GetAttachmentSize); | |
| 3686 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/uncompress", ChangeAttachmentCompression<CompressionType_None>); | |
| 3687 Register("/" + resourceTypes[i] + "/{id}/attachments/{name}/verify-md5", VerifyAttachment); | |
| 3688 } | |
| 782 | 3689 |
|
2129
0c09d1af22f3
"/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2128
diff
changeset
|
3690 Register("/tools/invalidate-tags", InvalidateTags); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3691 Register("/tools/lookup", Lookup); |
| 1354 | 3692 Register("/tools/find", Find); |
|
1139
f167b672db94
/tools/lookup URI to map DICOM UIDs to Orthanc identifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1054
diff
changeset
|
3693 |
|
1140
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3694 Register("/patients/{id}/studies", GetChildResources<ResourceType_Patient, ResourceType_Study>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3695 Register("/patients/{id}/series", GetChildResources<ResourceType_Patient, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3696 Register("/patients/{id}/instances", GetChildResources<ResourceType_Patient, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3697 Register("/studies/{id}/series", GetChildResources<ResourceType_Study, ResourceType_Series>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3698 Register("/studies/{id}/instances", GetChildResources<ResourceType_Study, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3699 Register("/series/{id}/instances", GetChildResources<ResourceType_Series, ResourceType_Instance>); |
|
94c5f6623b3a
URIs to get all the children of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1139
diff
changeset
|
3700 |
|
1281
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3701 Register("/studies/{id}/patient", GetParentResource<ResourceType_Study, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3702 Register("/series/{id}/patient", GetParentResource<ResourceType_Series, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3703 Register("/series/{id}/study", GetParentResource<ResourceType_Series, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3704 Register("/instances/{id}/patient", GetParentResource<ResourceType_Instance, ResourceType_Patient>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3705 Register("/instances/{id}/study", GetParentResource<ResourceType_Instance, ResourceType_Study>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3706 Register("/instances/{id}/series", GetParentResource<ResourceType_Instance, ResourceType_Series>); |
|
8dac11c78d71
URIs to get all the parents of a given resource in a single REST call
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1276
diff
changeset
|
3707 |
|
1166
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3708 Register("/patients/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3709 Register("/studies/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3710 Register("/series/{id}/instances-tags", GetChildInstancesTags); |
|
a921e3b5e763
bulk tags retrieval
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1146
diff
changeset
|
3711 |
| 782 | 3712 Register("/instances/{id}/content/*", GetRawContent); |
|
1702
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3713 |
|
9980875edc7c
started work on SliceOrdering
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
3714 Register("/series/{id}/ordered-slices", OrderSlices); |
|
4834
bec432ee1094
download of numpy arrays from the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4831
diff
changeset
|
3715 Register("/series/{id}/numpy", GetNumpySeries); // New in Orthanc 1.9.8 |
|
2209
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3716 |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3717 Register("/patients/{id}/reconstruct", ReconstructResource<ResourceType_Patient>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3718 Register("/studies/{id}/reconstruct", ReconstructResource<ResourceType_Study>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3719 Register("/series/{id}/reconstruct", ReconstructResource<ResourceType_Series>); |
|
e3fd5bc429a2
URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2140
diff
changeset
|
3720 Register("/instances/{id}/reconstruct", ReconstructResource<ResourceType_Instance>); |
|
2804
d88970f1ffbf
fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2780
diff
changeset
|
3721 Register("/tools/reconstruct", ReconstructAllResources); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3722 |
|
4698
d16c3c7f11ef
new route "/tools/bulk-content" to get the content of a set of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4697
diff
changeset
|
3723 Register("/tools/bulk-content", BulkContent); |
|
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4661
diff
changeset
|
3724 Register("/tools/bulk-delete", BulkDelete); |
|
751
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3725 } |
|
5197fd35333c
refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3726 } |